MagicalChair commited on
Commit
3477a84
·
verified ·
1 Parent(s): 318c59b

Upload README.md with huggingface_hub

Browse files
Files changed (1) hide show
  1. README.md +14 -8
README.md CHANGED
@@ -26,24 +26,30 @@ This repository contains test data for CauScale, a neural architecture for causa
26
 
27
  ## Data Format
28
 
29
- Each dataset instance consists of:
 
 
30
 
31
- - `DAG{i}.npy` ground-truth adjacency matrix `(d, d)`, boolean, where entry `(i, j) = True` means i → j
 
32
  - `data_interv{i}.npy` — concatenated observational and interventional data `(N, d)`
33
  - `intervention{i}.csv` — intervened node index per row (empty = observational)
34
  - `regime{i}.csv` — environment index per row (0 = observational, 1..K = interventional)
35
 
36
- ### Synthetic Data
37
-
38
- Generated using linear, neural network, and polynomial structural equation models on Erdős–Rényi (ER) and Scale-Free (SF) graphs.
39
-
40
- - **Test**: 10–1000 nodes graph-sizes, 5 DAGs each, 1000 data points per DAG
41
 
42
  ### SERGIO Gene Expression Data
43
 
44
  Simulated single-cell gene expression data using the [SERGIO simulator](https://github.com/PayamDiba/SERGIO).
45
 
46
- - **Test**: Nodes 100–200, ER graphs, 2 expected degrees (2, 4), 5 graphs each, 20000 interventional points
 
 
 
 
 
 
 
47
 
48
  ## Usage
49
 
 
26
 
27
  ## Data Format
28
 
29
+ ### Synthetic Data
30
+
31
+ Generated using linear, neural network, and polynomial structural equation models on Erdős–Rényi (ER) and Scale-Free (SF) graphs.
32
 
33
+ Each instance folder contains:
34
+ - `DAG{i}.npy` — ground-truth adjacency matrix `(d, d)`, boolean, entry `(i, j) = True` means i → j
35
  - `data_interv{i}.npy` — concatenated observational and interventional data `(N, d)`
36
  - `intervention{i}.csv` — intervened node index per row (empty = observational)
37
  - `regime{i}.csv` — environment index per row (0 = observational, 1..K = interventional)
38
 
39
+ **Test**: 10–1000 nodes, 5 DAGs each, 1000 data points per DAG
 
 
 
 
40
 
41
  ### SERGIO Gene Expression Data
42
 
43
  Simulated single-cell gene expression data using the [SERGIO simulator](https://github.com/PayamDiba/SERGIO).
44
 
45
+ Each instance folder contains:
46
+ - `DAG.npy` — ground-truth adjacency matrix `(d, d)`, boolean
47
+ - `data_intv.npy` — interventional data `(N_int, d)`
48
+ - `intv.npy` — intervention mask `(N_int, d)`, boolean
49
+ - `data.npy` / `clean.npy` / `dropout.npy` — observational data variants `(150, d)`
50
+ - `info.json` — metadata
51
+
52
+ **Test**: Nodes 100–200, ER graphs, expected degrees 2 and 4, 5 graphs each, 20000 interventional points
53
 
54
  ## Usage
55