{
 "format": "oscr-script-manifest/1",
 "repository": "github.com/dna-storage/binnd",
 "url": "https://github.com/dna-storage/BINND",
 "host": "github.com",
 "commit": "83226ea01693c7569f4391cd9a7b2e6f3fefd761",
 "license": "MIT",
 "license_confirmed_by": "license file LICENSE",
 "redistribution": "yes",
 "files": [
  {
   "path": "LICENSE",
   "sha256": "7dbc411c82c549caaec4ddceb7b805fa520453385e44da72b85b2c6021eb5101",
   "language": "License",
   "lines": 21,
   "truncated": false,
   "block": 3,
   "row": 7977
  },
  {
   "path": "README.md",
   "sha256": "bbcee42b5fdc6e0f0da0906fb8bb304ba941a3d75ff61f4710f4ca77e26d5fa1",
   "language": "Text",
   "lines": 149,
   "truncated": false,
   "block": 4,
   "row": 2636
  },
  {
   "path": "examples/BINND_demo.ipynb",
   "sha256": "1e67c7f37a1dbaf63942dc80b2a0402f3b3d8dc689165c1afc4c78060dc4dcd2",
   "language": "Jupyter",
   "lines": 351,
   "truncated": false,
   "block": 3,
   "row": 7715
  },
  {
   "path": "inference_demo/sample_inference.py",
   "sha256": "6d57039517f07d942862e3150440946780176abf2ea2cd9e578e0c5726884dfa",
   "language": "Python",
   "lines": 139,
   "truncated": false,
   "block": 3,
   "row": 23278
  },
  {
   "path": "init.sh",
   "sha256": "1481a2cb9d6773a14e5e88fc721d549afa16bab6b7ccda6c2c44470c0822486d",
   "language": "Shell",
   "lines": 81,
   "truncated": false,
   "block": 4,
   "row": 2078
  },
  {
   "path": "main.py",
   "sha256": "38ed495e23aefdff4c2cd334c0f93813e073ad51dbea8c8f56e4fda313964742",
   "language": "Python",
   "lines": 187,
   "truncated": false,
   "block": 3,
   "row": 24522
  },
  {
   "path": "scripts/run_experiment.py",
   "sha256": "9933b9bbb66cdbc427ee8f72847fb60784be75879de8d5da1c716eea53a1386b",
   "language": "Python",
   "lines": 86,
   "truncated": false,
   "block": 3,
   "row": 20982
  },
  {
   "path": "set_env.sh",
   "sha256": "8a289cdc77e662cc7f89888a898cf100572643654346d8a2e712e06c140d66aa",
   "language": "Shell",
   "lines": 37,
   "truncated": false,
   "block": 4,
   "row": 1866
  },
  {
   "path": "setup.py",
   "sha256": "4e0e113ce2f3d448e912fe2f9b0647f64910933e7dd1fccb542c3d98f0309806",
   "language": "Python",
   "lines": 8,
   "truncated": false,
   "block": 3,
   "row": 17648
  },
  {
   "path": "src/core/distance.py",
   "sha256": "525587b9f589010901e3ae8716781c19fb1ed22326157c63b7c33b9f53c04e26",
   "language": "Python",
   "lines": 54,
   "truncated": false,
   "block": 3,
   "row": 19908
  },
  {
   "path": "src/core/free_energy.py",
   "sha256": "1be0ab361ce41dfc6dca97bac4a5190703f53b3b2c1ae748716a94c4d0f3ce81",
   "language": "Python",
   "lines": 273,
   "truncated": false,
   "block": 3,
   "row": 25433
  },
  {
   "path": "src/core/preprocess.py",
   "sha256": "53ea1d700c1d7c88660c6b34fd73a4227cf2ca9ff111e3f31413aeb088056f8f",
   "language": "Python",
   "lines": 372,
   "truncated": false,
   "block": 3,
   "row": 26596
  },
  {
   "path": "src/dataloader/dataset.py",
   "sha256": "feafa4aafaf481edca84fb20df9a66dcf8d85159116e4f626a74669792b57656",
   "language": "Python",
   "lines": 122,
   "truncated": false,
   "block": 3,
   "row": 22383
  },
  {
   "path": "src/features/free_energy.py",
   "sha256": "0cb1bf782f270d1e82ad32f0a0f2906971a13f66b196a8435761fcaaa7bd018c",
   "language": "Python",
   "lines": 39,
   "truncated": false,
   "block": 3,
   "row": 19524
  },
  {
   "path": "src/networks/__init__.py",
   "sha256": "d24326c8dae3d9da35b1090bdeda0aa3505d1c70551f1e3807471b781647c1e3",
   "language": "Python",
   "lines": 1,
   "truncated": false,
   "block": 3,
   "row": 17483
  },
  {
   "path": "src/networks/cnn.py",
   "sha256": "aab9c90fa0a7c747fb628df6dc94de3aaec8bcf75c1bf9561d65d00119b760d9",
   "language": "Python",
   "lines": 484,
   "truncated": false,
   "block": 3,
   "row": 26795
  },
  {
   "path": "src/training/evaluation_metrics.py",
   "sha256": "dea1abaf737d087edad09a94b114db238c80841ee5ddd7c056c60f04790da0c7",
   "language": "Python",
   "lines": 153,
   "truncated": false,
   "block": 3,
   "row": 23210
  },
  {
   "path": "src/training/test.py",
   "sha256": "45718ac64a5eeb5fa67236791753a69604e3526c82c8acabc8c39fdff063edb2",
   "language": "Python",
   "lines": 25,
   "truncated": false,
   "block": 3,
   "row": 18597
  },
  {
   "path": "src/training/train.py",
   "sha256": "c49d82a605e447675a24ecf1adfe7d29ec37495078bf58533375c31a99aa5603",
   "language": "Python",
   "lines": 142,
   "truncated": false,
   "block": 3,
   "row": 23556
  },
  {
   "path": "src/tuning/tuning.py",
   "sha256": "f5d9f86f2598176b5e98363897f5049b924bfab5f87f743f472b96fe2524ceda",
   "language": "Python",
   "lines": 156,
   "truncated": false,
   "block": 3,
   "row": 23050
  },
  {
   "path": "src/utils/data_utils.py",
   "sha256": "adb11d207fdcb47707610971560b9fcd562ac190219e9f94820df682e3a85e5f",
   "language": "Python",
   "lines": 43,
   "truncated": false,
   "block": 3,
   "row": 19610
  },
  {
   "path": "src/utils/gpu_test.py",
   "sha256": "1431964c924bb24190a69201ae5e810b5db305938ec0a1459e736be61c92399b",
   "language": "Python",
   "lines": 7,
   "truncated": false,
   "block": 3,
   "row": 17720
  },
  {
   "path": "src/utils/paths.py",
   "sha256": "c379d225c01ac2e00b0e514ce4c6837f5202587de9289ef0a96bfc0a2a631ea1",
   "language": "Python",
   "lines": 32,
   "truncated": false,
   "block": 3,
   "row": 19274
  },
  {
   "path": "src/utils/stats.py",
   "sha256": "41edd7562bc59c4ce7b0a017d4db77c8648e818f16918d71610e0170bb336981",
   "language": "Python",
   "lines": 24,
   "truncated": false,
   "block": 3,
   "row": 18529
  },
  {
   "path": "src/visualize/plot.py",
   "sha256": "66071efe0e12f5432f9f590ba9395bd997a64fdd85067dfd139bc0bd43a32517",
   "language": "Python",
   "lines": 42,
   "truncated": false,
   "block": 3,
   "row": 19303
  },
  {
   "path": "src/visualize/plot_training.py",
   "sha256": "092bc8c7a69fd4b9785d8d8b0727cc793948b37afd5292fa4823fcad9cd7ef3f",
   "language": "Python",
   "lines": 53,
   "truncated": false,
   "block": 3,
   "row": 20249
  }
 ]
}