#!/usr/bin/env python3 import argparse from pathlib import Path from datasets import load_dataset def main(): parser = argparse.ArgumentParser(description="Download DeepSTARR splits and save them as parquet files.") parser.add_argument("--dataset_id", default="GenerTeam/DeepSTARR-enhancer-activity") parser.add_argument("--output_dir", required=True) parser.add_argument("--splits", default="train,valid,test") args = parser.parse_args() output_dir = Path(args.output_dir) output_dir.mkdir(parents=True, exist_ok=True) dataset = load_dataset(args.dataset_id) for split in [item.strip() for item in args.splits.split(",") if item.strip()]: if split not in dataset: raise KeyError(f"Split {split!r} not found. Available splits: {list(dataset.keys())}") path = output_dir / f"{split}.parquet" dataset[split].to_parquet(str(path)) print(f"Wrote {path}") if __name__ == "__main__": main()