Datasets:
| {"sentence_id": "ABS_10.3390/antiox11010133_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/antiox11010133", "sentence": "The canonical reactive oxygen species (ROS)-scavenging mode of the antioxidant action of flavonoids relies on the high susceptibility of their phenolic moieties to undergo oxidation.", "positive_terms": [{"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}, {"term": "oxidant", "ontology_id": "TFO:z0G1GF"}, {"term": "oxidation", "ontology_id": "TFO:Vub8zs", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "free radical scavenger", "ontology_id": "TFO:Vd8pUm"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "flavonoid", "ontology_id": "CHEBI:47916", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "xanthophyll", "ontology_id": "TFO:2zpu01"}]} | |
| {"sentence_id": "ABS_10.3390/antiox11010133_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/antiox11010133", "sentence": "Other phenol-compromising reactions, such as those involved in the biotransformation of flavonoids, can also markedly affect their antioxidant properties.", "positive_terms": [{"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "bioconversion", "ontology_id": "TFO:FL0GKY", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}], "negative_terms": [{"term": "Photochemical ozone formation", "ontology_id": "TFO:M5XW9e"}, {"term": "metabolic effect", "ontology_id": "TFO:HNs2O2"}]} | |
| {"sentence_id": "ABS_10.1016/j.fochx.2024.101907_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.fochx.2024.101907", "sentence": "Supervised statistical analysis highlighted the extensive oak wood contribution to the wine chemical fingerprints.", "positive_terms": [{"term": "oak wood", "ontology_id": "TFO:ICby6S"}, {"term": "wine", "ontology_id": "TFO:zfYlsr", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "oak wood (odour or aroma)", "ontology_id": "TFO:Foh658"}, {"term": "red oak chips", "ontology_id": "TFO:KPs2BL"}]} | |
| {"sentence_id": "ABS_10.3390/foods12173315_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/foods12173315", "sentence": "However, researchers have found that the bioavailability and bioactivity of plant polyphenols is generally low because they are usually in the form of tannins, anthocyanins and glycosides.", "positive_terms": [{"term": "plant microconstituent", "ontology_id": "TFO:v8QuUR"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "bioavailability", "ontology_id": "TFO:fegYKb", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "anthocyanins", "ontology_id": "TFO:VyDwYx", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "glycoside", "ontology_id": "CHEBI:24400", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "small fruits and berries other than Rubus, Ribes or Vaccinium species", "ontology_id": "TFO:zkj7dm"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.6b05819_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.6b05819", "sentence": "Phenolic compounds, proteins, polysaccharides, and minerals were analyzed using global and detailed analytical methods.", "positive_terms": [{"term": "analytical method", "ontology_id": "TFO:NFRrFU"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "protein", "ontology_id": "TFO:ETK11y", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polysaccharide", "ontology_id": "TFO:Kod608", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "minerals", "ontology_id": "TFO:8WLXwF", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "composition analysis data and charts", "ontology_id": "TFO:mlda4X"}, {"term": "phytochemicals for food fortification/enrichment", "ontology_id": "TFO:LGnoRd"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.5b00988_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.5b00988", "sentence": "The oxidized juices, characterized using the CIE L a b parameters, displayed various colors depending on the apple variety and native phenolic composition.", "positive_terms": [{"term": "color", "ontology_id": "TFO:aJ7LtA", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4"}], "negative_terms": [{"term": "food colours", "ontology_id": "TFO:S0UKm5"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "cider (odour or aroma)", "ontology_id": "TFO:0uDhlf"}, {"term": "mixed fruit juice", "ontology_id": "TFO:WN93jf"}, {"term": "green apple (odour or aroma)", "ontology_id": "TFO:GkaDvS"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.5b00988_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.5b00988", "sentence": "Interestingly, dihydrochalcones appeared to include precursors of some yellow compounds.", "positive_terms": [{"term": "color", "ontology_id": "TFO:aJ7LtA", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "dihydrogen", "ontology_id": "TFO:s88uwn"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "They contained less amorphous starch (10 % vs. 15 %), more pectic homogalacturonans (1.3 % vs. 1.1 %) in cotyledons, and fewer intercellular spaces.", "positive_terms": [{"term": "polysaccharide", "ontology_id": "TFO:Kod608", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "starch content", "ontology_id": "TO:0000696", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "starch", "ontology_id": "TFO:OgW5UcmX", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "pectins", "ontology_id": "TFO:Lsfn0m"}], "negative_terms": [{"term": "intensity D10", "ontology_id": "TFO:7XwNxr"}, {"term": "breadfruits and similar", "ontology_id": "TFO:3Wn1tl"}, {"term": "arabinoxylan", "ontology_id": "TFO:Yhyr8Qos"}, {"term": "hemicellulose", "ontology_id": "TFO:HKbjeOcN"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "To identify the factors affecting canning performance in Anicia lentils, three seed batches differing in quality were analysed in the dry state, during soaking, and during cooking.", "positive_terms": [{"term": "canned or jarred lentils", "ontology_id": "TFO:9auLlq"}, {"term": "lentils (dry seeds) and similar", "ontology_id": "TFO:ED1p7Q"}, {"term": "lentils (dry seeds)", "ontology_id": "TFO:FWqA4b"}, {"term": "canned", "ontology_id": "TFO:e0gk9p"}, {"term": "soaking", "ontology_id": "TFO:CCcwJk", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cooking", "ontology_id": "TFO:yVYKzW", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "azuki beans (dry seeds)", "ontology_id": "TFO:Cha5fo"}, {"term": "Canola rapeseed", "ontology_id": "TFO:4rtKPN"}, {"term": "canned or jarred chickpea", "ontology_id": "TFO:U22DSs"}]} | |
| {"sentence_id": "ABS_10.1016/j.jfca.2023.105450_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.jfca.2023.105450", "sentence": "Interestingly, the polyphenol concentration in most of the juices made from cider apple varieties (experimental juices and local cider producers) was on average 8-fold higher than in most of the juices found in supermarkets.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cider", "ontology_id": "TFO:94KZJp"}, {"term": "plant variety", "ontology_id": "TFO:5C4qC8", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "overripe apple (odour or aroma)", "ontology_id": "TFO:l5gd7W"}, {"term": "cider (odour or aroma)", "ontology_id": "TFO:0uDhlf"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.4c00468_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.4c00468", "sentence": "Saliva may therefore partly modulate the bioaccessibility of at least procyanidins in the gastric compartment.", "positive_terms": [{"term": "salivation", "ontology_id": "TFO:QgXKTk"}, {"term": "bioaccessibility", "ontology_id": "TFO:v33jJk", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "stomach phase", "ontology_id": "TFO:cQttXU", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "oral phase", "ontology_id": "TFO:b5nyHG"}, {"term": "digestion", "ontology_id": "TFO:b8jtpn", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "oral physiology attribute", "ontology_id": "TFO:o6IdQm"}, {"term": "proanthocyanidin", "ontology_id": "TFO:hSiIDs"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.4c00468_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.4c00468", "sentence": "In vitro gastric digestion led to extensive proteolysis of salivary proteins, and we formulate the hypothesis that the resulting peptides can interact with and precipitate some procyanidins.", "positive_terms": [{"term": "stomach phase", "ontology_id": "TFO:cQttXU"}, {"term": "gastric secretion", "ontology_id": "TFO:5AOQX8"}, {"term": "protein", "ontology_id": "TFO:ETK11y", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "gastric peristalsis", "ontology_id": "TFO:nveFHF"}, {"term": "salivation", "ontology_id": "TFO:QgXKTk"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.4c00468_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.4c00468", "sentence": "Beneficial polyphenols in apples can reach the stomach as complexes formed with salivary proteins.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "apples", "ontology_id": "TFO:2IyPh1", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "apple pomace", "ontology_id": "TFO:emsApBRH"}, {"term": "nectar, apple", "ontology_id": "TFO:5s8BYS"}, {"term": "apricot kernel", "ontology_id": "TFO:8DDr5o"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "fruit compote, apple", "ontology_id": "TFO:fgQFra"}, {"term": "granate apples and similar", "ontology_id": "TFO:DBzygE"}]} | |
| {"sentence_id": "ABS_10.1016/j.fochx.2024.101907_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.fochx.2024.101907", "sentence": "Moreover, quantitative differences were observed between oak barrel derived volatile compounds.", "positive_terms": [{"term": "oak wood", "ontology_id": "TFO:ICby6S"}, {"term": "volatile organic compound", "ontology_id": "TFO:dbs3kN", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "oak wood (odour or aroma)", "ontology_id": "TFO:Foh658"}, {"term": "terpene (odour or aroma)", "ontology_id": "TFO:cB9ypk"}, {"term": "trans-anethol (odour or aroma)", "ontology_id": "TFO:ufjgeQ"}, {"term": "laurel and similar", "ontology_id": "TFO:qtoZYS"}, {"term": "isoamyl acetate (odour or aroma)", "ontology_id": "TFO:Q8x9gE"}]} | |
| {"sentence_id": "ABS_10.3390/foods12173315_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/foods12173315", "sentence": "Effects of Fermentation on Bioactivity and the Composition of Polyphenols Contained in Polyphenol-Rich Foods: A Review", "positive_terms": [{"term": "food fermentation", "ontology_id": "TFO:JOcWe9"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "fermentation", "ontology_id": "TFO:mBcDR7", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "fermented functional drinks", "ontology_id": "TFO:POVTzF"}]} | |
| {"sentence_id": "ABS_10.3389/fphar.2022.806470_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3389/fphar.2022.806470", "sentence": "Pre-clinical and clinical evidence strongly suggest that long term consumption of diets rich in polyphenols offer protection against the development of various chronic diseases such as neurodegenerative diseases, cardiovascular diseases (CVDs), cancer, diabetes, inflammatory disorders and infectious illness.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "anti-inflammatory agent", "ontology_id": "CHEBI:67079", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "intended for diabetics", "ontology_id": "TFO:dtZaeS"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.4c00468_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.4c00468", "sentence": "Interactions between Salivary Proteins and Apple Polyphenols and the Fate of Complexes during Gastric Digestion", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "apples", "ontology_id": "TFO:2IyPh1", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "digestion", "ontology_id": "TFO:b8jtpn", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "amylopectin", "ontology_id": "TFO:NbZfJvjJ"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "nectar, apple", "ontology_id": "TFO:5s8BYS"}]} | |
| {"sentence_id": "ABS_10.1016/j.fochx.2024.101907_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.fochx.2024.101907", "sentence": "Chardonnay and Sauvignon blanc wines aged in oak wood barrels with low and medium tannin potentials were discriminated for their abilities to resist against oxidation during bottle storage.", "positive_terms": [{"term": "wine, white", "ontology_id": "TFO:q66XfD", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "oak wood", "ontology_id": "TFO:ICby6S", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "bulk aging", "ontology_id": "TFO:TGXyUj", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "preserved grape must", "ontology_id": "TFO:9ZoY5b"}, {"term": "canned or jarred table grape", "ontology_id": "TFO:ikaNiV"}, {"term": "winey (odour or aroma)", "ontology_id": "TFO:wGOgqj"}, {"term": "wine-like drinks", "ontology_id": "TFO:wH8St3"}, {"term": "maturing cellar", "ontology_id": "TFO:S9kwui"}, {"term": "neutral alcohol of vitivinicultural origin", "ontology_id": "TFO:bWPqnv"}, {"term": "sweet and sour sauce", "ontology_id": "TFO:dacbDb"}, {"term": "balsamic vinegar", "ontology_id": "TFO:kJOhea"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.6b05819_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.6b05819", "sentence": "Haze composition in three apple-based beverages, namely, French sparkling cider, apple juice, and pommeau, was studied.", "positive_terms": [{"term": "turbidity", "ontology_id": "TFO:AJ0yoUO5"}, {"term": "spirits from fruit", "ontology_id": "TFO:jv4fw5"}, {"term": "cider", "ontology_id": "TFO:94KZJp", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "soft drink, apple flavour", "ontology_id": "TFO:M1H8Qi"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "water apples", "ontology_id": "TFO:2XYEXr"}, {"term": "vinegar, apple", "ontology_id": "TFO:x8k7qC"}, {"term": "canned fruit cocktail", "ontology_id": "TFO:zqIkgG"}]} | |
| {"sentence_id": "ABS_10.3390/foods12173315_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/foods12173315", "sentence": "Polyphenol-rich fermented foods (PFFs) are reported to have better bioavailability and bioactivity than polyphenol-rich foods, because polyphenols are used as substrates during food fermentation and are hydrolyzed into smaller phenolic compounds (such as quercetin, kaempferol, gallic acid, ellagic acid, etc.) with higher bioactivity and bioavailability by polyphenol-associated enzymes (PAEs, e.g., tannases, esterases, phenolic acid decarboxylases and glycosidases).", "positive_terms": [{"term": "fermented fruit products", "ontology_id": "TFO:QKY0jV"}, {"term": "fermented vegetables", "ontology_id": "TFO:2l8pVa"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "bioavailability", "ontology_id": "TFO:fegYKb", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "processed or preserved fruits", "ontology_id": "TFO:mr1FnB"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.6b05819_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.6b05819", "sentence": "Potassium and calcium were the main minerals.", "positive_terms": [{"term": "potassium", "ontology_id": "TFO:mg4lL3", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "calcium", "ontology_id": "TFO:jNSp55", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "minerals", "ontology_id": "TFO:8WLXwF"}], "negative_terms": [{"term": "minerals and products derived thereof (feed)", "ontology_id": "TFO:yHhUFN"}, {"term": "calcium sodium phosphate (feed)", "ontology_id": "TFO:1GmipG"}, {"term": "mineral (odour or aroma)", "ontology_id": "TFO:7hThoa"}, {"term": "potassium phosphate", "ontology_id": "TFO:iivhm0"}, {"term": "potassium carbonate", "ontology_id": "TFO:0PZnE3"}, {"term": "potassium citrate", "ontology_id": "TFO:tU8dFV"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.6b05819_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.6b05819", "sentence": "Proteins were present in all of the samples in proportions of <6% of haze except in two apple juice hazes, where they were the main constituents (18 and 24%).", "positive_terms": [{"term": "protein", "ontology_id": "TFO:ETK11y", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "canned or jarred apple", "ontology_id": "TFO:Kjzswr"}, {"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "dried apples", "ontology_id": "TFO:nGD320"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "fruit juice concentrates", "ontology_id": "TFO:dEf5qO"}, {"term": "whey protein", "ontology_id": "TFO:7woHWF"}, {"term": "alpha-lactalbumin", "ontology_id": "TFO:3efmp2"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "Exploring the factors contributing to texture loss in lentil cv. Anicia during cooking", "positive_terms": [{"term": "cooking", "ontology_id": "TFO:yVYKzW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "lentils (dry seeds)", "ontology_id": "TFO:FWqA4b", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "canned or jarred lentils", "ontology_id": "TFO:9auLlq"}], "negative_terms": [{"term": "lentil hulls (feed)", "ontology_id": "TFO:usY2qN"}, {"term": "grain quality attribute", "ontology_id": "TFO:2pQCAO"}, {"term": "loss on drying method", "ontology_id": "TFO:jxfsWh"}, {"term": "texture profile analysis", "ontology_id": "TFO:KotqaK"}, {"term": "Modified EsSense Profile", "ontology_id": "TFO:0WnOC2"}, {"term": "cooked cured or seasoned meat", "ontology_id": "TFO:zeKzjA"}, {"term": "short (texture)", "ontology_id": "TFO:VM9cDM"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.5b00988_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.5b00988", "sentence": "The pigments responsible for the yellow-orange coloration of apple juices have remained largely unknown up to now.", "positive_terms": [{"term": "color", "ontology_id": "TFO:aJ7LtA", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "yellow fruit (odour or aroma)", "ontology_id": "TFO:tJo2rW"}, {"term": "food colours", "ontology_id": "TFO:S0UKm5"}, {"term": "juice, orange", "ontology_id": "TFO:glwlLh"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "Assessments included seed appearance, morphology, histology, composition, mechanical properties, and hydration behaviour.", "positive_terms": [{"term": "seeds", "ontology_id": "TFO:GHMmRO", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "grain quality attribute", "ontology_id": "TFO:2pQCAO"}, {"term": "evaluation before putting in the mouth", "ontology_id": "TFO:ZDxOg0"}, {"term": "cereal grains screenings (feed)", "ontology_id": "TFO:3IYeqa"}, {"term": "lablab beans (dry seeds)", "ontology_id": "TFO:Rv4ODS"}, {"term": "blue lupin (dry seeds)", "ontology_id": "TFO:viXJnR"}, {"term": "yellow lupin (dry seeds)", "ontology_id": "TFO:KKTYca"}, {"term": "swelling measurement", "ontology_id": "TFO:XIiuhi"}, {"term": "thermoacoustimetry", "ontology_id": "TFO:zmYAfL"}, {"term": "germination", "ontology_id": "TFO:R9bTIB"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "The first cultivar was Marie Menard, which is highly concentrated in polyphenols and has a standard profile showing high levels of hydroxycinnamic acids and monomeric catechins, widely involved in oxidation reactions catalyzed by the polyphenol oxidase; the second one was Guillevic, which has an atypical phenolic profile for a cider apple, with highly polymerized procyanidins and no monomeric catechins, which thus induces a low sensitivity to enzymatic browning.", "positive_terms": [{"term": "apples", "ontology_id": "TFO:2IyPh1", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "plant variety", "ontology_id": "TFO:5C4qC8", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cider", "ontology_id": "TFO:94KZJp"}], "negative_terms": [{"term": "candied fruit, grape", "ontology_id": "TFO:R2lJPb"}, {"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "wine grape and similar", "ontology_id": "TFO:bz0HsX"}, {"term": "java apples", "ontology_id": "TFO:Dblqwu"}, {"term": "thorn apples", "ontology_id": "TFO:X2AGOq"}]} | |
| {"sentence_id": "ABS_10.3390/antiox11010133_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/antiox11010133", "sentence": "Revisiting the Oxidation of Flavonoids: Loss, Conservation or Enhancement of Their Antioxidant Properties", "positive_terms": [{"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}, {"term": "oxidation", "ontology_id": "TFO:Vub8zs", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}], "negative_terms": [{"term": "thermovinification", "ontology_id": "TFO:O8hWQH"}, {"term": "use of enzyme improving grape maceration", "ontology_id": "TFO:YlnLQS"}, {"term": "theatannin", "ontology_id": "TFO:bMaLgq"}, {"term": "tocotrienols", "ontology_id": "TFO:pSX6fSh2"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.5b00988_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.5b00988", "sentence": "With regard to phenolic classes, flavanol monomers and hydroxycinnamic acids played an essential role in the formation of oxidation products.", "positive_terms": [{"term": "oxidant", "ontology_id": "TFO:z0G1GF"}, {"term": "oxidation product", "ontology_id": "TFO:poFrxA9u", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}], "negative_terms": [{"term": "organic acid", "ontology_id": "TFO:Sazkgb"}, {"term": "ferulic acid", "ontology_id": "TFO:eFDYHc"}, {"term": "fatty acid esters of ascorbic acid", "ontology_id": "TFO:rtGWMW"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Kinetics of Polyphenol Losses During Soaking and Drying of Cider Apples", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cider", "ontology_id": "TFO:94KZJp", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "soaking", "ontology_id": "TFO:CCcwJk", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "drying", "ontology_id": "TFO:lYuLpl", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "apples", "ontology_id": "TFO:2IyPh1", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "juice concentrate, apricots", "ontology_id": "TFO:wDsOwS"}, {"term": "fruit waste", "ontology_id": "TFO:DvxyzF"}, {"term": "juice, apricot", "ontology_id": "TFO:JObi45"}, {"term": "dried apples", "ontology_id": "TFO:nGD320"}, {"term": "apple pulp, dried (feed)", "ontology_id": "TFO:cKN52z"}, {"term": "dried fruits", "ontology_id": "TFO:l8vuQi"}, {"term": "cider (odour or aroma)", "ontology_id": "TFO:0uDhlf"}, {"term": "falling number method", "ontology_id": "TFO:op5cnV8J"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Both cultivars were subjected to osmotic dehydration at two temperatures (45 and 60 A degrees C) or to convective air-drying, and a combination of the two processes was also tested.", "positive_terms": [{"term": "dried vegetables", "ontology_id": "TFO:FP4BAC"}, {"term": "dried fruits", "ontology_id": "TFO:l8vuQi"}, {"term": "drying", "ontology_id": "TFO:lYuLpl", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "osmotic dehydration", "ontology_id": "TFO:xHLIVp", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "convection", "ontology_id": "TFO:rSJbZj", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "hot air drying", "ontology_id": "TFO:0InHOl", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "dry brining", "ontology_id": "TFO:OnDSfh"}, {"term": "natural drying", "ontology_id": "TFO:x46htU"}]} | |
| {"sentence_id": "ABS_10.1016/j.fochx.2024.101907_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.fochx.2024.101907", "sentence": "Sauvignon blanc volatile thiols appeared to decrease during bottle aging, regardless of the oak tannin potential.", "positive_terms": [{"term": "wine grape", "ontology_id": "TFO:bCLtfb"}, {"term": "volatile organic compound", "ontology_id": "TFO:dbs3kN", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "bulk aging", "ontology_id": "TFO:TGXyUj", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "oak wood", "ontology_id": "TFO:ICby6S", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "noble rot wine", "ontology_id": "TFO:6S70KH"}, {"term": "preserved grape must", "ontology_id": "TFO:9ZoY5b"}, {"term": "steviol glucosides from fermentation", "ontology_id": "TFO:72FzMG"}, {"term": "wine-like drinks", "ontology_id": "TFO:wH8St3"}, {"term": "butylated hydroxytoluene", "ontology_id": "TFO:M3BSYG"}, {"term": "cabbage (odour or aroma)", "ontology_id": "TFO:GTCEW4"}]} | |
| {"sentence_id": "ABS_10.1016/j.jfca.2023.105450_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.jfca.2023.105450", "sentence": "More quantitative information is needed concerning these oxidized phenolic compounds (OP) that contribute to the organoleptic and nutritional properties of apple juices.", "positive_terms": [{"term": "juice, apple", "ontology_id": "TFO:SFKod4"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "sensory attribute", "ontology_id": "TFO:KqGBzs", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "nutrition or health-related claim", "ontology_id": "TFO:lKtxWSgd", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "oxidation product", "ontology_id": "TFO:poFrxA9u", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "overripe apple (odour or aroma)", "ontology_id": "TFO:l5gd7W"}, {"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "heavy fruit (odour or aroma)", "ontology_id": "TFO:2rnSrU"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "polyphenol (odour or aroma)", "ontology_id": "TFO:hPCGym"}, {"term": "phenolic (odour or aroma)", "ontology_id": "TFO:XEA9rS"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_13", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Moreover, the level of sucrose impregnation could mask the astringency of procyanidins.", "positive_terms": [{"term": "sucrose (common sugar)", "ontology_id": "TFO:5orpdX", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "sucrose content", "ontology_id": "TO:0000328", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "astringency", "ontology_id": "TFO:a5aeup56"}], "negative_terms": [{"term": "sucrose (odour or aroma)", "ontology_id": "TFO:HIcBUC"}, {"term": "steviol glucosides from fermentation", "ontology_id": "TFO:72FzMG"}, {"term": "unripe", "ontology_id": "TFO:N4nerf"}, {"term": "sucrose acetate isobutyrate", "ontology_id": "TFO:tjGon6"}, {"term": "saccharin", "ontology_id": "TFO:esMuMp"}, {"term": "aspartame", "ontology_id": "TFO:LwqeYt"}, {"term": "salt of aspartame-acesulfame", "ontology_id": "TFO:oZZY0p"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_9", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Procyanidins were better preserved by the processes than hydroxycinnamic acids or monomeric catechins.", "positive_terms": [{"term": "hydroxycinnamic acid", "ontology_id": "CHEBI:24689", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}], "negative_terms": [{"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}, {"term": "coenzyme Q10 formulations", "ontology_id": "TFO:phBZ2E"}, {"term": "proanthocyanidin", "ontology_id": "TFO:hSiIDs"}]} | |
| {"sentence_id": "ABS_10.3390/foods12173315_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/foods12173315", "sentence": "Meanwhile, polyphenols could also promote the growth of beneficial bacteria during the fermentation process while inhibiting the growth of pathogenic bacteria.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "fermentation", "ontology_id": "TFO:mBcDR7", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "microorganism", "ontology_id": "TFO:eIojLQ", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "microbial growth", "ontology_id": "TFO:2LiCGH", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "polyphenol (odour or aroma)", "ontology_id": "TFO:hPCGym"}, {"term": "fermented fruit products", "ontology_id": "TFO:QKY0jV"}, {"term": "bacterial product rich in polyhydroxybutyrate (feed)", "ontology_id": "TFO:ZvQdHW"}, {"term": "sodium propionate", "ontology_id": "TFO:aMGxMS"}]} | |
| {"sentence_id": "ABS_10.1016/j.jfca.2023.105450_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.jfca.2023.105450", "sentence": "During apple juice production, phenolic compounds undergo enzymatic oxidation leading to newly formed molecules.", "positive_terms": [{"term": "oxidation", "ontology_id": "TFO:Vub8zs", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "enzymatic activity", "ontology_id": "TFO:ujHIWq", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}], "negative_terms": [{"term": "fermented fruit products", "ontology_id": "TFO:QKY0jV"}, {"term": "fruit waste", "ontology_id": "TFO:DvxyzF"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "oxidative pyrolysis", "ontology_id": "TFO:o4FrSE"}]} | |
| {"sentence_id": "ABS_10.3390/antiox11010133_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/antiox11010133", "sentence": "In such apparent paradoxical cases, the antioxidant activity arises from the pro-oxidant and/or electrophilic character of some of their oxidation-derived metabolites and is exerted by activating the Nrf2-Keap1 pathway, which upregulates the cell's endogenous antioxidant capacity, and/or, by preventing the activation of the pro-oxidant and pro-inflammatory NF-kappa B pathway.", "positive_terms": [{"term": "oxidation", "ontology_id": "TFO:Vub8zs"}, {"term": "oxidation product", "ontology_id": "TFO:poFrxA9u", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}, {"term": "oxidant", "ontology_id": "TFO:z0G1GF"}], "negative_terms": [{"term": "beta-tocopherol", "ontology_id": "TFO:tlNigDsQ"}, {"term": "alpha-tocopherol", "ontology_id": "TFO:ozgAKMwe"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.6b05819_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.6b05819", "sentence": "Polyphenols, represented mainly by procyanidins, were the main compounds identified and accounted for 10-31% of haze.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "turbidity", "ontology_id": "TFO:AJ0yoUO5", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "colorimetric attribute", "ontology_id": "TFO:xx3h2F"}, {"term": "colorimetry", "ontology_id": "TFO:BlfLhtal"}, {"term": "proanthocyanidin", "ontology_id": "TFO:hSiIDs"}, {"term": "gallotannin and ellagitannin", "ontology_id": "TFO:I9jbYG"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "These findings clarify the roles of the lentil seed coat and cotyledons, particularly with regard to pectin and starch, in water absorption and texture loss during cooking.", "positive_terms": [{"term": "lentils (dry seeds) and similar", "ontology_id": "TFO:ED1p7Q"}, {"term": "lentils (dry seeds)", "ontology_id": "TFO:FWqA4b"}, {"term": "texture", "ontology_id": "PATO:0000150", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "pectins", "ontology_id": "TFO:Lsfn0m", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "starch", "ontology_id": "TFO:OgW5UcmX", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "water absorption by seed", "ontology_id": "TO:0002648", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "water absorption capacity", "ontology_id": "TFO:6UqKeH", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cooking", "ontology_id": "TFO:yVYKzW", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "lentil hulls (feed)", "ontology_id": "TFO:usY2qN"}, {"term": "lentil (dry seeds) (feed)", "ontology_id": "TFO:GVFrff"}, {"term": "lentils and similar (fresh seeds without pods)", "ontology_id": "TFO:KXE7YK"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Indeed, these latter groups of polyphenols were first of all involved in enzymatic browning but could also diffuse more easily as their molecular weight was lower.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "molecular weight", "ontology_id": "TFO:BwQQSr", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "browning index", "ontology_id": "TFO:dpfq8j", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "phlorotannin", "ontology_id": "TFO:VHfAVY"}, {"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}, {"term": "gravy browning", "ontology_id": "TFO:XswRMD"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Cider apples contain high concentrations of polyphenols, but their composition differs markedly as a function of cultivar.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "cider", "ontology_id": "TFO:94KZJp"}, {"term": "apples and similar", "ontology_id": "TFO:wrti9T"}, {"term": "plant variety", "ontology_id": "TFO:5C4qC8", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "cider (odour or aroma)", "ontology_id": "TFO:0uDhlf"}, {"term": "candied fruit, grape", "ontology_id": "TFO:R2lJPb"}]} | |
| {"sentence_id": "ABS_10.1016/j.jfca.2023.105450_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.jfca.2023.105450", "sentence": "Furthermore, the statistical classification of the juices based on their native and oxidized polyphenol compositions clearly underlined the great discrepancies in polyphenol composition observed in this panel of juices available on the French market.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "fruit juices", "ontology_id": "TFO:NgRcZU", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "oxidation", "ontology_id": "TFO:Vub8zs", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "spirits from fruit", "ontology_id": "TFO:jv4fw5"}, {"term": "fruit or vegetable juice concentrate", "ontology_id": "TFO:i9pXgj"}]} | |
| {"sentence_id": "ABS_10.1016/j.fochx.2024.101907_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.fochx.2024.101907", "sentence": "This study highlights the post bottling positive impact of oak wood barrel aging on wines oxidative stability, related to oak barrel tannin potential.", "positive_terms": [{"term": "oak wood", "ontology_id": "TFO:ICby6S", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "wine", "ontology_id": "TFO:zfYlsr", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "bulk aging", "ontology_id": "TFO:TGXyUj", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "antioxidants", "ontology_id": "TFO:tHfHTb"}], "negative_terms": [{"term": "ullage", "ontology_id": "TFO:5VWBUW"}, {"term": "grape pomace", "ontology_id": "TFO:WhzAIZE1"}, {"term": "preserved grape must", "ontology_id": "TFO:9ZoY5b"}, {"term": "winey (odour or aroma)", "ontology_id": "TFO:wGOgqj"}, {"term": "wine-like drinks", "ontology_id": "TFO:wH8St3"}, {"term": "fortified wine", "ontology_id": "TFO:GWlDkk"}, {"term": "butylated hydroxytoluene", "ontology_id": "TFO:M3BSYG"}, {"term": "tertiary-butyl hydroquinone", "ontology_id": "TFO:TONDBa"}]} | |
| {"sentence_id": "ABS_10.3389/fphar.2022.806470_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3389/fphar.2022.806470", "sentence": "In recent years, dietary polyphenols have gained significant interest among researchers due to their potential chemopreventive/protective functions in the maintenance of human health and diseases.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "dietary substance", "ontology_id": "TFO:aXBHwXBd", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.5b00988_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.5b00988", "sentence": "HPLC-DAD-MS Profiling of Polyphenols Responsible for the Yellow-Orange Color in Apple Juices of Different French Cider Apple Varieties", "positive_terms": [{"term": "color", "ontology_id": "TFO:aJ7LtA", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "juice, apple", "ontology_id": "TFO:SFKod4", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cider", "ontology_id": "TFO:94KZJp", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "polyphenol compound content", "ontology_id": "TO:0001172", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "plant variety", "ontology_id": "TFO:5C4qC8", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "carpel epidermis", "ontology_id": "PO:0025096", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "food colours", "ontology_id": "TFO:S0UKm5"}, {"term": "candied fruit, apple", "ontology_id": "TFO:Wp8yGR"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "juice, orange", "ontology_id": "TFO:glwlLh"}, {"term": "juice concentrate, apple", "ontology_id": "TFO:qGJa8c"}, {"term": "yellow fruit (odour or aroma)", "ontology_id": "TFO:tJo2rW"}, {"term": "boysenberry", "ontology_id": "TFO:vAqEET"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_12", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Polyphenols were better retained by convective drying than by osmotic dehydration, and when soaking was applied as a pretreatment, polyphenol losses were limited during subsequent drying.", "positive_terms": [{"term": "drying", "ontology_id": "TFO:lYuLpl"}, {"term": "osmotic dehydration", "ontology_id": "TFO:xHLIVp", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "loss on drying method", "ontology_id": "TFO:jxfsWh"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "soaking", "ontology_id": "TFO:CCcwJk", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "absorption drying", "ontology_id": "TFO:ShUn4g"}, {"term": "dried fruits", "ontology_id": "TFO:l8vuQi"}, {"term": "dried", "ontology_id": "TFO:9nac4i"}, {"term": "humectants", "ontology_id": "TFO:MCjkYC"}]} | |
| {"sentence_id": "ABS_10.1021/acs.jafc.4c00468_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1021/acs.jafc.4c00468", "sentence": "The present study aimed at documenting the interactions between salivary proteins and cider apple polyphenols and the fate of complexes during gastric digestion.", "positive_terms": [{"term": "cider", "ontology_id": "TFO:94KZJp"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "digestion", "ontology_id": "TFO:b8jtpn", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "gastric secretion", "ontology_id": "TFO:5AOQX8"}, {"term": "juice, apple-carrot", "ontology_id": "TFO:Ez0ZHH"}, {"term": "salivation", "ontology_id": "TFO:QgXKTk"}, {"term": "cider (odour or aroma)", "ontology_id": "TFO:0uDhlf"}]} | |
| {"sentence_id": "ABS_10.1016/j.ijbiomac.2024.134223_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.ijbiomac.2024.134223", "sentence": "Polyphenols, including phenolics, alkaloids, and terpenes, are secondary metabolites that are commonly found in fruits, vegetables, and beverages, such as tea, coffee, wine, chocolate, and beer.", "positive_terms": [{"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "terpene", "ontology_id": "TFO:R2yb5N", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "alkaloid", "ontology_id": "TFO:T3H3oe", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "polyphenol (odour or aroma)", "ontology_id": "TFO:hPCGym"}]} | |
| {"sentence_id": "ABS_10.1007/s11947-010-0361-1_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s11947-010-0361-1", "sentence": "Phenolic compounds were quantified by high performance liquid chromatography for various processing times and regardless of the quantity of impregnated sugar.", "positive_terms": [{"term": "chromatography", "ontology_id": "TFO:4YSyBX", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "phenolic compound", "ontology_id": "TFO:h4ObhQ"}, {"term": "polyphenol", "ontology_id": "TFO:OVTDEW"}], "negative_terms": [{"term": "polyphenol (odour or aroma)", "ontology_id": "TFO:hPCGym"}, {"term": "gallotannin and ellagitannin", "ontology_id": "TFO:I9jbYG"}]} | |
| {"sentence_id": "ABS_10.1016/j.foodchem.2025.146422_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.foodchem.2025.146422", "sentence": "High-quality seeds had a lower initial hydration rate during soaking and a lower moisture equilibrium during cooking (140 % vs. 180 %), linked to greater deformability.", "positive_terms": [{"term": "seeds", "ontology_id": "TFO:GHMmRO", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "rehydration", "ontology_id": "TFO:TSLKmx", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "soaking", "ontology_id": "TFO:CCcwJk", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "moisture content", "ontology_id": "TFO:1eLSl5", "note": "Proposition manuelle sans ID d'ontologie"}, {"term": "cooking", "ontology_id": "TFO:yVYKzW", "note": "Proposition manuelle sans ID d'ontologie"}], "negative_terms": [{"term": "overripe", "ontology_id": "TFO:6RxHkO"}, {"term": "moist distillers’ grains (feed)", "ontology_id": "TFO:385ZnK"}, {"term": "dried vegetables", "ontology_id": "TFO:FP4BAC"}, {"term": "pigeon peas (dry seeds)", "ontology_id": "TFO:BjqwJA"}, {"term": "mung beans (dry seeds)", "ontology_id": "TFO:X6lKQY"}, {"term": "lablab beans (dry seeds)", "ontology_id": "TFO:Rv4ODS"}, {"term": "slow-roasted", "ontology_id": "TFO:kOmJJH"}, {"term": "high-protein low-cellulose fraction of sunflower meal (feed)", "ontology_id": "TFO:MSTQuo"}, {"term": "dry-heat cooked", "ontology_id": "TFO:Igs2JU"}]} | |
| {"sentence_id": "ABS_10.1186/s12870-023-04370-0_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1186/s12870-023-04370-0", "sentence": "We identified the 22 least variable metabolites, based on their coefficients of variation.", "positive_terms": [{"term": "metabolite content trait", "ontology_id": "TO:0000281"}, {"term": "biomarker", "ontology_id": "CHEBI:59163", "note": "Proposition manuelle"}], "negative_terms": [{"term": "lignin content", "ontology_id": "TO:0000731"}, {"term": "ferulic acid content", "ontology_id": "TO:0000675"}]} | |
| {"sentence_id": "ABS_10.3389/fpls.2019.01091_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3389/fpls.2019.01091", "sentence": "These highly reactive metabolites can lead to cellular damage when the reduction-oxidation (redox) homeostasis becomes unbalanced.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523"}, {"term": "reactive nitrogen species", "ontology_id": "CHEBI:62764"}, {"term": "metabolite", "ontology_id": "CHEBI:25212", "note": "Proposition manuelle"}], "negative_terms": [{"term": "response to stress", "ontology_id": "GO:0006950"}]} | |
| {"sentence_id": "ABS_10.1111/tpj.15991_11", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/tpj.15991", "sentence": "Overall, analysis of the subcellular compartmentation reveals a mechanism behind leaf growth inhibition under ammonium stress linked to the higher energy cost of vacuole expansion, as a result of alterations in pH, the inhibition of glycolysis routes and the depletion of organic acids.", "positive_terms": [{"term": "organelle", "ontology_id": "GO:0043226", "note": "Proposition manuelle"}], "negative_terms": [{"term": "leaf necrosis", "ontology_id": "TO:0000652"}, {"term": "respiration rate", "ontology_id": "TO:0001026"}, {"term": "leaf necrosis tolerance", "ontology_id": "TO:0002663"}]} | |
| {"sentence_id": "ABS_10.1016/j.plaphy.2024.108789_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.plaphy.2024.108789", "sentence": "The research aims the ability to reduce agents during postharvest storage on fruit for delayed ripening with the regulation of oxidative stress.", "positive_terms": [{"term": "fruit ripening", "ontology_id": "GO:0009835"}, {"term": "late whole plant fruit ripening stage", "ontology_id": "PO:0007050"}, {"term": "antioxidant", "ontology_id": "CHEBI:22586"}, {"term": "oxidative stress response", "ontology_id": "TO:0002657", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1104/pp.19.00911_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1104/pp.19.00911", "sentence": "Metabolite profiling of NTRC-RNA interference lines revealed increased organic and amino acid levels, but reduced sugar levels, implying that NTRC regulates the osmotic balance of developing fruits.", "positive_terms": [{"term": "organic acid", "ontology_id": "CHEBI:64709", "note": "Proposition manuelle"}, {"term": "amino acid content", "ontology_id": "TO:0002673", "note": "Proposition manuelle"}, {"term": "osmotic adjustment capacity", "ontology_id": "TO:0000507", "note": "Proposition manuelle"}, {"term": "fruit", "ontology_id": "PO:0009001", "note": "Proposition manuelle"}, {"term": "fruit growth and development trait", "ontology_id": "TO:0000929", "note": "Proposition manuelle"}, {"term": "plant metabolite", "ontology_id": "CHEBI:76924", "note": "Proposition manuelle"}, {"term": "sugar content", "ontology_id": "TO:0000333", "note": "Proposition manuelle"}], "negative_terms": [{"term": "jasmonates", "ontology_id": "CHEBI:24937"}, {"term": "leaf necrosis tolerance", "ontology_id": "TO:0002663"}, {"term": "abscisic acid concentration", "ontology_id": "TO:0000478"}]} | |
| {"sentence_id": "ABS_10.1093/plphys/kiaf519_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiaf519", "sentence": "Focusing on heat-associated MFSC responses, we identified 103 transcripts uniquely responsive to these conditions, including 2 TFs (Zinc finger TF 32 and a B3 family protein) that may act as master regulators of all heat-associated MFSCs.", "positive_terms": [{"term": "high temperature stress response", "ontology_id": "TO:0000259"}, {"term": "fertilizer", "ontology_id": "CHEBI:33287", "note": "Proposition manuelle"}], "negative_terms": [{"term": "freezing stress response", "ontology_id": "TO:0001151"}, {"term": "frost damage stress response", "ontology_id": "TO:0001152"}]} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "The subcellular metabolome of tomato leaves was studied at four stages of leaf development, with a particular emphasis on the composition of the vacuole, a major actor of cell growth.", "positive_terms": [{"term": "intracellular organelle", "ontology_id": "GO:0043229"}, {"term": "leaf senescence", "ontology_id": "GO:0010150"}, {"term": "cell growth and development trait", "ontology_id": "TO:0002686", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plastid", "ontology_id": "GO:0009536"}]} | |
| {"sentence_id": "ABS_10.1016/j.stress.2024.100420_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.stress.2024.100420", "sentence": "The study revealed that the altered physicochemical profile, increased metabolite compositional diversity and discriminatory metabolite biomarkers are liable for improved performance of the hybrid HTT VRNTH18283 against the negative impact of high temperature in comparison to HTS VRNTH19072.", "positive_terms": [{"term": "high temperature stress response", "ontology_id": "TO:0000259"}, {"term": "biomarker", "ontology_id": "CHEBI:59163", "note": "Proposition manuelle"}], "negative_terms": [{"term": "hydrogen peroxide content", "ontology_id": "TO:0000605"}, {"term": "heterosis", "ontology_id": "TO:0000355"}]} | |
| {"sentence_id": "ABS_10.1111/pce.12153_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/pce.12153", "sentence": "Insights have been gained recently into the way individual factors, genetic, environmental or developmental, control the carotenoid biosynthetic pathway at the molecular level.", "positive_terms": [{"term": "carotenoid content", "ontology_id": "TO:0000496"}, {"term": "carotenoid", "ontology_id": "CHEBI:23044"}, {"term": "lycopene", "ontology_id": "CHEBI:15948"}, {"term": "biosynthetic process", "ontology_id": "GO:0009058", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "The Evolution of Leaf Function during Development Is Reflected in Profound Changes in the Metabolic Composition of the Vacuole", "positive_terms": [{"term": "leaf development", "ontology_id": "GO:0048366"}, {"term": "leaf senescence", "ontology_id": "GO:0010150"}, {"term": "organelle scale", "ontology_id": "TFO:GVHola", "note": "Proposition manuelle"}, {"term": "plant metabolite", "ontology_id": "CHEBI:76924", "note": "Proposition manuelle"}], "negative_terms": [{"term": "vascular leaf development stage", "ontology_id": "PO:0025570"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2012.5104_12", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2012.5104", "sentence": "It is proposed that targeted usage of new technical approaches, such as quantitative in vivo imaging, will provide novel leverage to the dissection of plant mitochondrial signaling.", "positive_terms": [{"term": "regulation of signaling", "ontology_id": "GO:0023051"}, {"term": "organelle", "ontology_id": "GO:0043226", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of signal transduction", "ontology_id": "GO:0009966"}, {"term": "photosynthetic ability", "ontology_id": "TO:0000316"}]} | |
| {"sentence_id": "ABS_10.1111/pce.12153_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/pce.12153", "sentence": "We develop the idea that reactive oxygen species/redox status and sugars/carbon status can be considered as integrated factors that account for most effects of the major environmental factors influencing carotenoid biosynthesis.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523"}, {"term": "carotenoid content", "ontology_id": "TO:0000496"}, {"term": "carotenoid", "ontology_id": "CHEBI:23044"}, {"term": "sugar content", "ontology_id": "TO:0000333", "note": "Proposition manuelle"}, {"term": "carbon content", "ontology_id": "TO:0000466", "note": "Proposition manuelle"}, {"term": "environmental impact", "ontology_id": "TFO:B7ygDh", "note": "Proposition manuelle"}, {"term": "anabolism", "ontology_id": "TFO:kD3yHT", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1016/j.tplants.2007.01.005_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.tplants.2007.01.005", "sentence": "In this review, mitochondrial redox metabolism is discussed in relation to the integrated cellular energy and redox function that controls plant cell biology and fate.", "positive_terms": [{"term": "plant metabolite", "ontology_id": "CHEBI:76924"}, {"term": "cellular", "ontology_id": "TFO:3OiyH2", "note": "Proposition manuelle"}, {"term": "plant cell", "ontology_id": "PO:0009002", "note": "Proposition manuelle"}, {"term": "biological role", "ontology_id": "CHEBI:24432", "note": "Proposition manuelle"}, {"term": "organelle", "ontology_id": "GO:0043226", "note": "Proposition manuelle"}, {"term": "reactive oxygen species", "ontology_id": "CHEBI:26523", "note": "Proposition manuelle"}, {"term": "reactive nitrogen species", "ontology_id": "CHEBI:62764", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of metabolic process", "ontology_id": "GO:0019222"}, {"term": "respiration rate", "ontology_id": "TO:0001026"}]} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "During its development, the leaf undergoes profound metabolic changes to ensure, among other things, its growth.", "positive_terms": [{"term": "leaf development", "ontology_id": "GO:0048366"}, {"term": "regulation of leaf development", "ontology_id": "GO:2000024"}, {"term": "leaf senescence", "ontology_id": "GO:0010150"}, {"term": "metabolic process", "ontology_id": "GO:0008152", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1093/plphys/kiaf519_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiaf519", "sentence": "Together, we reveal a coordinated and complexity-dependent molecular program in tomato, offering insights into plant adaptation to MFSC and identifying candidate regulatory and metabolic markers for engineering climate-resilient crops.", "positive_terms": [{"term": "freezing stress response", "ontology_id": "TO:0001151"}, {"term": "drought stress response trait", "ontology_id": "TO:0000394"}, {"term": "plant trait", "ontology_id": "TO:0000387"}, {"term": "resilience (TPA)", "ontology_id": "TFO:VCPE0x", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1093/plphys/kiab101_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiab101", "sentence": "Plant mitochondria are tightly connected with photosynthesis, photorespiration, and cytosolic metabolism, thereby providing redox-balancing.", "positive_terms": [{"term": "organelle", "ontology_id": "GO:0043226"}, {"term": "net photosynthetic rate", "ontology_id": "TO:0001027"}, {"term": "plastid", "ontology_id": "GO:0009536"}, {"term": "respiration rate", "ontology_id": "TO:0001026", "note": "Proposition manuelle"}, {"term": "redox titration", "ontology_id": "TFO:OJUu0v", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1016/j.stress.2024.100420_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.stress.2024.100420", "sentence": "Metabolomics revealed upregulated metabolite diversity in HTT fruit extract (11,453 m/z features) as compared to 8834 m/z features in HTS.", "positive_terms": [{"term": "metabolite content trait", "ontology_id": "TO:0000281"}, {"term": "fruit", "ontology_id": "PO:0009001", "note": "Proposition manuelle"}], "negative_terms": [{"term": "ferulic acid content", "ontology_id": "TO:0000675"}, {"term": "hydrogen peroxide content", "ontology_id": "TO:0000605"}]} | |
| {"sentence_id": "ABS_10.1093/plphys/kiaf519_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiaf519", "sentence": "Comparative analyses across tomato, Arabidopsis, Chlamydomonas, rice, and soybean highlighted a conserved molecular signature associated with MFSC.", "positive_terms": [{"term": "tomatoes", "ontology_id": "TFO:HIjtHo", "note": "Proposition manuelle"}, {"term": "rice grain", "ontology_id": "TFO:VdMbAz", "note": "Proposition manuelle"}, {"term": "soybean (fresh seeds without pods)", "ontology_id": "TFO:puIS2M", "note": "Proposition manuelle"}, {"term": "fertilizer", "ontology_id": "CHEBI:33287", "note": "Proposition manuelle"}, {"term": "molecular scale", "ontology_id": "TFO:knwPEx", "note": "Proposition manuelle"}], "negative_terms": [{"term": "fructose content", "ontology_id": "TO:0006005"}, {"term": "plant trait", "ontology_id": "TO:0000387"}, {"term": "anthoxanthin", "ontology_id": "CHEBI:192499"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2014.6018_9", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2014.6018", "sentence": "Future Directions: Emerging tools are enabling ever-increasing spatiotemporal resolution of metabolism and imaging of redox status components.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523"}, {"term": "spatial region", "ontology_id": "BFO:0000006", "note": "Proposition manuelle"}, {"term": "temporality", "ontology_id": "TFO:DwAaW0", "note": "Proposition manuelle"}, {"term": "metabolite", "ontology_id": "CHEBI:25212", "note": "Proposition manuelle"}, {"term": "reactive nitrogen species", "ontology_id": "CHEBI:62764", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of metabolic process", "ontology_id": "GO:0019222"}, {"term": "positive regulation of metabolic process", "ontology_id": "GO:0009893"}]} | |
| {"sentence_id": "ABS_10.1111/tpj.15991_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/tpj.15991", "sentence": "However, high concentrations of soil NH4+ provoke growth inhibition, partly caused by the reduction of cell enlargement and associated with modifications of cell composition, such as an increase of sugars and a decrease in organic acids.", "positive_terms": [{"term": "ammonium", "ontology_id": "TFO:Qdmz8X", "note": "Proposition manuelle"}, {"term": "cell growth and development trait", "ontology_id": "TO:0002686", "note": "Proposition manuelle"}, {"term": "sugar content", "ontology_id": "TO:0000333", "note": "Proposition manuelle"}, {"term": "organic acid", "ontology_id": "TFO:Sazkgb", "note": "Proposition manuelle"}], "negative_terms": [{"term": "calcium sensitivity", "ontology_id": "TO:0000006"}, {"term": "chlorine sensitivity", "ontology_id": "TO:0000029"}, {"term": "zinc sensitivity", "ontology_id": "TO:0000351"}]} | |
| {"sentence_id": "ABS_10.1111/tpj.15991_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/tpj.15991", "sentence": "The vacuolar expansion was monitored and metabolites and inorganic ion contents, together with intracellular pH, were determined.", "positive_terms": [{"term": "pH", "ontology_id": "TFO:0y33Oh", "note": "Proposition manuelle"}, {"term": "cell", "ontology_id": "TFO:LTo4XP", "note": "Proposition manuelle"}, {"term": "organelle", "ontology_id": "GO:0043226", "note": "Proposition manuelle"}, {"term": "ion", "ontology_id": "CHEBI:24870", "note": "Proposition manuelle"}, {"term": "metabolite", "ontology_id": "CHEBI:25212", "note": "Proposition manuelle"}], "negative_terms": [{"term": "cuperic ion concentration", "ontology_id": "TO:0006058"}, {"term": "respiration rate", "ontology_id": "TO:0001026"}, {"term": "cuperous ion concentration", "ontology_id": "TO:0006057"}]} | |
| {"sentence_id": "ABS_10.1111/nph.19160_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/nph.19160", "sentence": "Our kinetic modelling approach indicated that tomato fruit development displayed growth phase-dependent redox metabolism linked with central metabolism via pyridine nucleotides and H2O2 availability, while providing a new tool to the scientific community to investigate redox metabolism in fruits.", "positive_terms": [{"term": "fruit ripening", "ontology_id": "GO:0009835"}, {"term": "fruit growth and development trait", "ontology_id": "TO:0000929"}, {"term": "hydrogen peroxide", "ontology_id": "CHEBI:16240", "note": "Proposition manuelle"}, {"term": "metabolism", "ontology_id": "TFO:Uap3Sp", "note": "Proposition manuelle"}, {"term": "computation and modelling", "ontology_id": "TFO:PHRph2", "note": "Proposition manuelle"}], "negative_terms": [{"term": "phenylpropanoid metabolic process", "ontology_id": "GO:0009698"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2014.6018_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2014.6018", "sentence": "Critical Issues: It is becoming apparent that plastid, mitochondria, and peroxisome functions influence a wide range of processes outside of the organelles themselves.", "positive_terms": [{"term": "organelle", "ontology_id": "GO:0043226"}, {"term": "intracellular organelle", "ontology_id": "GO:0043229"}, {"term": "function", "ontology_id": "BFO:0000034", "note": "Proposition manuelle"}, {"term": "cellular process", "ontology_id": "GO:0009987", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plastid", "ontology_id": "GO:0009536"}]} | |
| {"sentence_id": "ABS_10.1093/plphys/kiab101_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiab101", "sentence": "To operate in sync with the whole cell, mitochondria can communicate their functional status via mitochondrial retrograde signaling to change nuclear gene expression, and several recent breakthroughs here are discussed.", "positive_terms": [{"term": "cell communication", "ontology_id": "GO:0007154"}, {"term": "cell", "ontology_id": "TFO:LTo4XP", "note": "Proposition manuelle"}, {"term": "organelle scale", "ontology_id": "TFO:GVHola", "note": "Proposition manuelle"}, {"term": "signaling", "ontology_id": "GO:0023052", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of cell communication", "ontology_id": "GO:0010646"}, {"term": "neurotransmitter", "ontology_id": "CHEBI:25512"}]} | |
| {"sentence_id": "ABS_10.1093/hr/uhae176_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/hr/uhae176", "sentence": "Integrated transcriptome and metabolome reveal that SlSYTA modulates ROS responses driving resistance defense in Solanum lycopersicum", "positive_terms": [{"term": "tomatoes", "ontology_id": "TFO:HIjtHo", "note": "Proposition manuelle"}, {"term": "resistance", "ontology_id": "TFO:lT5O82", "note": "Proposition manuelle"}, {"term": "reactive oxygen species", "ontology_id": "CHEBI:26523", "note": "Proposition manuelle"}], "negative_terms": [{"term": "herbicide sensitivity", "ontology_id": "TO:0000058"}, {"term": "Meloidogyne javanica resistance", "ontology_id": "TO:0002706"}, {"term": "leaf yellowing tolerance", "ontology_id": "TO:0002664"}]} | |
| {"sentence_id": "ABS_10.1104/pp.19.00911_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1104/pp.19.00911", "sentence": "In immature fruits, NTRC downregulation decreased transient starch accumulation, which led to a subsequent decrease in soluble sugars in ripe fruits.", "positive_terms": [{"term": "early whole plant fruit ripening stage", "ontology_id": "PO:0007001"}, {"term": "fruit development stage", "ontology_id": "PO:0001002", "note": "Proposition manuelle"}], "negative_terms": [{"term": "leaf necrosis tolerance", "ontology_id": "TO:0002663"}, {"term": "leaf necrosis", "ontology_id": "TO:0000652"}]} | |
| {"sentence_id": "ABS_10.1016/j.stress.2024.100420_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.stress.2024.100420", "sentence": "Multivariate data analyses showed sample discrimination based on distinct phytochemical diversification.", "positive_terms": [{"term": "sample type", "ontology_id": "TFO:NeLeDA", "note": "Proposition manuelle"}, {"term": "phytochemical", "ontology_id": "TFO:v8QuUR", "note": "Proposition manuelle"}], "negative_terms": [{"term": "diterpene phytoalexin", "ontology_id": "CHEBI:60952"}, {"term": "carbon isotope discrimination", "ontology_id": "TO:0002643"}, {"term": "phytoalexin content", "ontology_id": "TO:0002669"}]} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "This result suggests that the maintenance of the osmolarity of the vacuole of mature leaves would largely involve inorganic molecules.", "positive_terms": [{"term": "osmotic adjustment capacity", "ontology_id": "TO:0000507"}, {"term": "osmolyte", "ontology_id": "CHEBI:25728"}, {"term": "mineral and ion content trait", "ontology_id": "TO:0000465"}, {"term": "leaf", "ontology_id": "PO:0025034", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1016/j.tplants.2007.01.005_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.tplants.2007.01.005", "sentence": "Mitochondria are key players in plant cell redox homeostasis and signalling.", "positive_terms": [{"term": "intracellular organelle", "ontology_id": "GO:0043229"}, {"term": "signaling", "ontology_id": "GO:0023052", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plastid", "ontology_id": "GO:0009536"}, {"term": "plant metabolite", "ontology_id": "CHEBI:76924"}]} | |
| {"sentence_id": "ABS_10.1093/plphys/kiab101_10", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiab101", "sentence": "Both the major recent advances and outstanding questions are reviewed, which may help future research efforts on plant mitochondria.", "positive_terms": [{"term": "organelle", "ontology_id": "GO:0043226"}, {"term": "intracellular organelle", "ontology_id": "GO:0043229"}, {"term": "plant cell", "ontology_id": "PO:0009002", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plastid", "ontology_id": "GO:0009536"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2012.5104_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2012.5104", "sentence": "Nevertheless, no mitochondrial RTG-signaling pathway is yet understood in plants.", "positive_terms": [{"term": "respiration rate", "ontology_id": "TO:0001026", "note": "Proposition manuelle"}], "negative_terms": [{"term": "cytoplasmic male sterility", "ontology_id": "TO:0000580"}, {"term": "rice ragged stunt virus resistance", "ontology_id": "TO:0000386"}, {"term": "plastid", "ontology_id": "GO:0009536"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2014.6018_1", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2014.6018", "sentence": "Significance: Reduction-oxidation (Redox) status operates as a major integrator of subcellular and extracellular metabolism and is simultaneously itself regulated by metabolic processes.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523"}, {"term": "regulation of metabolic process", "ontology_id": "GO:0019222"}, {"term": "metabolic process", "ontology_id": "GO:0008152"}, {"term": "cellular", "ontology_id": "TFO:3OiyH2", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1016/j.stress.2024.100420_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.stress.2024.100420", "sentence": "We have used untargeted metabolite profiling and comparative biochemical and biological analyses of high temperature tolerant (HTT) tomato hybrid VRNTH18283 and sensitive (HTS) VRNTH19072 to decipher altered metabolic pathways and biomarker metabolites which were linked with enhanced antioxidant activity in HTT fruits.", "positive_terms": [{"term": "high temperature stress response", "ontology_id": "TO:0000259"}, {"term": "biomarker", "ontology_id": "TFO:CUGIU7", "note": "Proposition manuelle"}], "negative_terms": [{"term": "low temperature stress response", "ontology_id": "TO:0000303"}, {"term": "hydrogen peroxide content", "ontology_id": "TO:0000605"}]} | |
| {"sentence_id": "ABS_10.1093/plphys/kiaf519_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/plphys/kiaf519", "sentence": "Here, we used an integrative multi-omics approach to dissect the response of tomato (Solanum lycopersicum) plants to an MFSC of up to 6 low-intensity abiotic stressors.", "positive_terms": [{"term": "abiotic plant stress response trait", "ontology_id": "TO:0000168"}, {"term": "tomatoes", "ontology_id": "TFO:HIjtHo", "note": "Proposition manuelle"}, {"term": "fertilizer", "ontology_id": "CHEBI:33287", "note": "Proposition manuelle"}], "negative_terms": [{"term": "freezing stress response", "ontology_id": "TO:0001151"}, {"term": "water stress response trait", "ontology_id": "TO:0000237"}]} | |
| {"sentence_id": "ABS_10.1007/978-1-0716-0142-6_6_0", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/978-1-0716-0142-6_6", "sentence": "Targeted Metabolomics of Plant Hormones and Redox Metabolites in Stomatal Immunity", "positive_terms": [{"term": "stomatal resistance", "ontology_id": "TO:0000523"}, {"term": "stomatal closure", "ontology_id": "GO:0090332"}, {"term": "plant hormone", "ontology_id": "CHEBI:37848", "note": "Proposition manuelle"}], "negative_terms": [{"term": "glyphosate", "ontology_id": "CHEBI:27744"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2014.6018_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2014.6018", "sentence": "This review summarizes redox status control of metabolism and the metabolic control of redox status at both cellular and subcellular levels.", "positive_terms": [{"term": "regulation of metabolic process", "ontology_id": "GO:0019222"}, {"term": "metabolic process", "ontology_id": "GO:0008152"}, {"term": "cellular", "ontology_id": "TFO:3OiyH2", "note": "Proposition manuelle"}, {"term": "organelle scale", "ontology_id": "TFO:GVHola", "note": "Proposition manuelle"}, {"term": "reactive oxygen species", "ontology_id": "CHEBI:26523", "note": "Proposition manuelle"}, {"term": "reactive nitrogen species", "ontology_id": "CHEBI:62764", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of secondary metabolic process", "ontology_id": "GO:0043455"}]} | |
| {"sentence_id": "ABS_10.1089/ars.2012.5104_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1089/ars.2012.5104", "sentence": "This review summarizes recent advances toward elucidating redox processes and other bioenergetic factors as a part of RTG signaling of plant mitochondria.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523"}, {"term": "signaling", "ontology_id": "GO:0023052", "note": "Proposition manuelle"}, {"term": "organelle", "ontology_id": "GO:0043226", "note": "Proposition manuelle"}, {"term": "plant cell", "ontology_id": "PO:0009002", "note": "Proposition manuelle"}], "negative_terms": [{"term": "respiration rate", "ontology_id": "TO:0001026"}, {"term": "root oxidative activity", "ontology_id": "TO:0000434"}]} | |
| {"sentence_id": "ABS_10.1093/hr/uhae176_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/hr/uhae176", "sentence": "Collectively, our research presents groundbreaking insights into the intricate molecular mechanisms governing plant immunity, emphasizing the significant role of SlSYTA in orchestrating plant responses to biotic stress.", "positive_terms": [{"term": "microbial disease response", "ontology_id": "TO:0000112"}, {"term": "biotic plant stress trait", "ontology_id": "TO:0000179"}, {"term": "plant hormone", "ontology_id": "CHEBI:37848"}, {"term": "regulation of signaling", "ontology_id": "GO:0023051", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1111/nph.70882_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/nph.70882", "sentence": "The interplay between respiration, ethylene biosynthesis, and signaling is discussed, emphasizing feedback loops involving mitochondrial retrograde regulation and redox-sensitive control of ripening.", "positive_terms": [{"term": "respiration rate", "ontology_id": "TO:0001026"}, {"term": "ripening", "ontology_id": "TFO:mULm4z", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of respiratory gaseous exchange", "ontology_id": "GO:0043576"}, {"term": "respiratory gaseous exchange by respiratory system", "ontology_id": "GO:0007585"}]} | |
| {"sentence_id": "ABS_10.1007/978-1-0716-0142-6_6_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/978-1-0716-0142-6_6", "sentence": "The methods reported here can be expanded to other metabolites and other biological systems beyond plants and bacterial pathogens.", "positive_terms": [{"term": "plant metabolite", "ontology_id": "CHEBI:76924"}, {"term": "prokaryotic metabolite", "ontology_id": "CHEBI:75787"}, {"term": "bacterial metabolite", "ontology_id": "CHEBI:76969", "note": "Proposition manuelle"}], "negative_terms": [{"term": "secondary metabolic process", "ontology_id": "GO:0019748"}]} | |
| {"sentence_id": "ABS_10.1093/hr/uhae176_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1093/hr/uhae176", "sentence": "Remarkably, our findings shed light on SlSYTA's negative regulation of pivotal aspects of pattern-triggered immunity (PTI) defense, notably hindering the reactive oxygen species (ROS) burst, impeding stomatal closure, and curtailing callose deposition.", "positive_terms": [{"term": "reactive oxygen species", "ontology_id": "CHEBI:26523", "note": "Proposition manuelle"}], "negative_terms": [{"term": "leaf yellowing tolerance", "ontology_id": "TO:0002664"}, {"term": "freezing stress response", "ontology_id": "TO:0001151"}, {"term": "peanut late leaf spot disease response", "ontology_id": "TO:0001155"}]} | |
| {"sentence_id": "ABS_10.1007/978-1-0716-0142-6_6_5", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/978-1-0716-0142-6_6", "sentence": "In our experiment, we used the reference plant Arabidopsis thaliana infected with the biotrophic pathogen Pseudomonas syringe pv. tomato (Pst) DC3000, and examined the changes in hormone and redox metabolites in systemic leaves, using the targeted metabolomics strategy in order to investigate potential functions of these metabolites in systemic acquired resistance (SAR) during a plant's immune responses.", "positive_terms": [{"term": "microbial disease response", "ontology_id": "TO:0000112"}, {"term": "plant hormone", "ontology_id": "CHEBI:37848"}, {"term": "reactive oxygen species", "ontology_id": "CHEBI:26523", "note": "Proposition manuelle"}, {"term": "reactive nitrogen species", "ontology_id": "CHEBI:62764", "note": "Proposition manuelle"}, {"term": "resistance", "ontology_id": "TFO:lT5O82", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plant nutrient response trait", "ontology_id": "TO:0000480"}]} | |
| {"sentence_id": "ABS_10.1007/s00709-015-0836-z_4", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1007/s00709-015-0836-z", "sentence": "The MADS-box transcription factor RIN, a global regulator of fruit ripening, is vital for the broad aspects of ripening, in both ethylene-dependent and independent manners.", "positive_terms": [{"term": "fruit ripening trait", "ontology_id": "TO:0002633"}, {"term": "fruit ripening stage", "ontology_id": "PO:0025502"}, {"term": "biological regulation", "ontology_id": "GO:0065007", "note": "Proposition manuelle"}], "negative_terms": [{"term": "jasmonates", "ontology_id": "CHEBI:24937"}]} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_7", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "Furthermore, these analyses revealed that the vacuole, rather rich in secondary metabolites and sugars in the growth phases, accumulated organic acids thereafter.", "positive_terms": [{"term": "secondary metabolic process", "ontology_id": "GO:0019748"}, {"term": "phenylpropanoid metabolic process", "ontology_id": "GO:0009698"}, {"term": "plastid", "ontology_id": "GO:0009536", "note": "Proposition manuelle"}], "negative_terms": [{"term": "amino acid content", "ontology_id": "TO:0002673"}]} | |
| {"sentence_id": "ABS_10.1111/nph.70882_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/nph.70882", "sentence": "Interactions between fruit photosynthesis and respiration remain poorly understood, particularly under stress.", "positive_terms": [{"term": "respiration rate", "ontology_id": "TO:0001026"}, {"term": "net photosynthetic rate", "ontology_id": "TO:0001027"}, {"term": "photosynthetic rate", "ontology_id": "TO:0001015"}, {"term": "response to stress", "ontology_id": "GO:0006950", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1186/s12870-023-04370-0_8", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1186/s12870-023-04370-0", "sentence": "We also examined regulations in specific metabolites using correlations with individual proteins and transcripts, which revealed that a stable metabolite does not always correlate with proteins and transcripts of its known related pathways.ConclusionsThe regulation of the least variable metabolites was then interpreted regarding their roles as hubs in metabolic pathways or as signalling molecules.", "positive_terms": [{"term": "regulation of metabolic process", "ontology_id": "GO:0019222", "note": "Proposition manuelle"}, {"term": "protein", "ontology_id": "CHEBI:36080", "note": "Proposition manuelle"}], "negative_terms": [{"term": "regulation of secondary metabolic process", "ontology_id": "GO:0043455"}, {"term": "regulation of secondary metabolite biosynthetic process", "ontology_id": "GO:1900376"}]} | |
| {"sentence_id": "ABS_10.3390/metabo11120848_6", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.3390/metabo11120848", "sentence": "Thus, sucrose underwent a strong allocation, being mostly located in the vacuole at the beginning of development and in the cytosol at maturity.", "positive_terms": [{"term": "sucrose content", "ontology_id": "TO:0000328"}, {"term": "plant sap", "ontology_id": "PO:0025538"}, {"term": "organelle scale", "ontology_id": "TFO:GVHola", "note": "Proposition manuelle"}, {"term": "cytoplasm", "ontology_id": "GO:0005737", "note": "Proposition manuelle"}], "negative_terms": [{"term": "sucrose synthase activity trait", "ontology_id": "TO:0000699"}]} | |
| {"sentence_id": "ABS_10.1186/s12870-023-04370-0_2", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1186/s12870-023-04370-0", "sentence": "The corresponding metabolism regulations have been widely described in tomato during fruit growth and ripening.", "positive_terms": [{"term": "regulation of metabolic process", "ontology_id": "GO:0019222"}, {"term": "fruit ripening", "ontology_id": "GO:0009835"}, {"term": "regulation of phenylpropanoid metabolic process", "ontology_id": "GO:2000762"}, {"term": "tomatoes", "ontology_id": "TFO:HIjtHo", "note": "Proposition manuelle"}, {"term": "fruit development", "ontology_id": "GO:0010154", "note": "Proposition manuelle"}], "negative_terms": []} | |
| {"sentence_id": "ABS_10.1016/j.tplants.2007.01.005_3", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1016/j.tplants.2007.01.005", "sentence": "Thanks to oxygenic photosynthesis, plant mitochondria often operate in an oxygen- and carbohydrate-rich environment.", "positive_terms": [{"term": "organelle", "ontology_id": "GO:0043226"}, {"term": "intracellular organelle", "ontology_id": "GO:0043229"}, {"term": "photosynthetic ability", "ontology_id": "TO:0000316", "note": "Proposition manuelle"}], "negative_terms": [{"term": "plastid", "ontology_id": "GO:0009536"}]} | |
| {"sentence_id": "ABS_10.1111/nph.70882_9", "model_semantique_source": "S-PubMedBert-MS-MARCO", "source": "10.1111/nph.70882", "sentence": "Finally, we outline postharvest and metabolic engineering strategies targeting ARPs as complementary to ethylene-centered approaches to improve fruit quality, stress resilience, and nutritional value.", "positive_terms": [{"term": "ethylene sensitivity", "ontology_id": "TO:0000173"}, {"term": "plant hormone", "ontology_id": "CHEBI:37848"}, {"term": "regulation of respiratory gaseous exchange", "ontology_id": "GO:0043576", "note": "Proposition manuelle"}], "negative_terms": [{"term": "positive regulation of phosphorus metabolic process", "ontology_id": "GO:0010562"}]} | |