| datasets: |
| - id: d001 |
| modality: bulk RNA |
| path: d001/expression.h5ad |
| n_samples: 63 |
| n_genes: 22292 |
| gene_id_type: ncbi_gene_id |
| - id: d002 |
| modality: bulk RNA |
| path: d002/expression.h5ad |
| n_samples: 694 |
| n_genes: 39376 |
| gene_id_type: ncbi_gene_id |
| - id: d003 |
| modality: bulk RNA |
| path: d003/expression.h5ad |
| n_samples: 249 |
| n_genes: 39376 |
| gene_id_type: ncbi_gene_id |
| - id: d004 |
| modality: bulk RNA |
| path: d004/expression.h5ad |
| n_samples: 223 |
| n_genes: 39376 |
| gene_id_type: ncbi_gene_id |
| - id: d005 |
| modality: bulk RNA |
| path: d005/expression.h5ad |
| n_samples: 90 |
| n_genes: 39376 |
| gene_id_type: ncbi_gene_id |
| - id: d006 |
| modality: bulk RNA |
| path: d006/expression.h5ad |
| n_samples: 162 |
| n_genes: 37583 |
| gene_id_type: ncbi_gene_id |
| - id: d007 |
| modality: bulk RNA |
| path: d007/expression.h5ad |
| n_samples: 49 |
| n_genes: 37583 |
| gene_id_type: ncbi_gene_id |
| - id: d008 |
| modality: bulk RNA |
| path: d008/expression.h5ad |
| n_samples: 251 |
| n_genes: 37583 |
| gene_id_type: ncbi_gene_id |
| - id: d009 |
| modality: bulk RNA |
| path: d009/expression.h5ad |
| n_samples: 35 |
| n_genes: 22292 |
| gene_id_type: ncbi_gene_id |
| - id: d011 |
| modality: bulk RNA |
| path: d011/expression.h5ad |
| n_samples: 32 |
| n_genes: 20725 |
| gene_id_type: ncbi_gene_id |
| species: human |
| input_role: baseline |
| input_normalization: FPKM |
| - id: d012 |
| modality: bulk RNA |
| path: d012/expression.h5ad |
| n_samples: 3 |
| n_genes: 17888 |
| gene_id_type: ncbi_gene_id |
| species: mouse |
| input_role: baseline |
| input_normalization: FPKM |
| - id: d014 |
| modality: bulk RNA |
| path: d014/expression.h5ad |
| n_samples: 11 |
| n_genes: 20998 |
| gene_id_type: ncbi_gene_id |
| species: human |
| input_role: baseline |
| input_normalization: Linearized microarray expression |
| - id: d015 |
| modality: bulk RNA |
| path: d015/expression.h5ad |
| n_samples: 55 |
| n_genes: 16162 |
| gene_id_type: ncbi_gene_id |
| species: human |
| input_role: baseline |
| input_normalization: Species-specific FPKM; mouse genes mapped to human orthologs |
| - id: d016 |
| modality: bulk RNA |
| path: d016/expression.h5ad |
| n_samples: 49 |
| n_genes: 15442 |
| gene_id_type: ncbi_gene_id |
| species: human |
| input_role: baseline |
| input_normalization: Species-specific FPKM; mouse genes mapped to human orthologs |
| - id: d017 |
| modality: Single Cell RNA |
| path: d017/expression.h5ad |
| n_samples: 126 |
| n_genes: 19617 |
| gene_id_type: ncbi_gene_id |
| observation_level: cell |
| sample_id_column: sample_id |
| n_cells: 98555 |
| - id: d019 |
| modality: Single Cell RNA |
| path: d019/expression.h5ad |
| n_samples: 63 |
| n_genes: 29729 |
| gene_id_type: ncbi_gene_id |
| observation_level: cell |
| sample_id_column: sample_id |
| n_cells: 305427 |
| - id: d020 |
| modality: Single Cell RNA |
| path: d020/expression.h5ad |
| n_samples: 20 |
| n_genes: 29729 |
| gene_id_type: ncbi_gene_id |
| observation_level: cell |
| sample_id_column: sample_id |
| n_cells: 79897 |
|
|
