Update README.md

README.md

@@ -5,978 +5,8 @@ configs:
   - config_name: "cullpdb_pc15.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains281"
     data_files:
       - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains281.csv"
-    default: true
-  - config_name: "main"
-    data_files:
-      - split: train
-        path: "curated_csv/cullpdb_combined_chains.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains267"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains267.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains785"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains785.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains713"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains713.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains1979"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains1979.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains1782"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains1782.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains3227"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains3227.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains2846"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains2846.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains4044"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains4044.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3539"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3539.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains4565"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains4565.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3963"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3963.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains5184"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains5184.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4456"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4456.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains5552"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains5552.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-2.8_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4746"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-2.8_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4746.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-3.0_len40-10000_R0.3_Xray_d2026_01_26_chains5732"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-3.0_len40-10000_R0.3_Xray_d2026_01_26_chains5732.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-3.0_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4904"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-3.0_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains4904.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-4.0_len40-10000_R1.0_Xray+EM_d2026_01_26_chains7734"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-4.0_len40-10000_R1.0_Xray+EM_d2026_01_26_chains7734.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-4.0_noBrks_len40-10000_R1.0_Xray+EM_d2026_01_26_chains6642"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-4.0_noBrks_len40-10000_R1.0_Xray+EM_d2026_01_26_chains6642.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains8118"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains8118.csv"
-  - config_name: "cullpdb_pc15.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains7087"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc15.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains7087.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains314"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains314.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains300"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains300.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains988"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains988.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains899"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains899.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains2727"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains2727.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains2417"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains2417.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains4724"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains4724.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains4107"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains4107.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains6038"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains6038.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5173"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5173.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains6834"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains6834.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5822"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5822.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains7807"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains7807.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains6601"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains6601.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains8374"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains8374.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-2.8_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains7020"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-2.8_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains7020.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-3.0_len40-10000_R0.3_Xray_d2026_01_26_chains8624"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-3.0_len40-10000_R0.3_Xray_d2026_01_26_chains8624.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-3.0_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains7235"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-3.0_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains7235.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-4.0_len40-10000_R1.0_Xray+EM_d2026_01_26_chains11420"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-4.0_len40-10000_R1.0_Xray+EM_d2026_01_26_chains11420.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-4.0_noBrks_len40-10000_R1.0_Xray+EM_d2026_01_26_chains9498"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-4.0_noBrks_len40-10000_R1.0_Xray+EM_d2026_01_26_chains9498.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains11928"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains11928.csv"
-  - config_name: "cullpdb_pc20.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains10067"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc20.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains10067.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains344"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains344.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains330"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.0_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains330.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains1197"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.2_len40-10000_R0.2_Xray_d2026_01_26_chains1197.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains1085"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.2_noBrks_len40-10000_R0.2_Xray_d2026_01_26_chains1085.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains3750"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.5_len40-10000_R0.25_Xray_d2026_01_26_chains3750.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3260"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.5_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains3260.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains6908"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.8_len40-10000_R0.25_Xray_d2026_01_26_chains6908.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5910"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-1.8_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains5910.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains9107"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.0_len40-10000_R0.25_Xray_d2026_01_26_chains9107.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains7677"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.0_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains7677.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains10438"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.2_len40-10000_R0.25_Xray_d2026_01_26_chains10438.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains8712"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.2_noBrks_len40-10000_R0.25_Xray_d2026_01_26_chains8712.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains11959"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.5_len40-10000_R0.3_Xray_d2026_01_26_chains11959.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains9872"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.5_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains9872.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains12868"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc25.0_res0.0-2.8_len40-10000_R0.3_Xray_d2026_01_26_chains12868.csv"
-  - config_name: "cullpdb_pc25.0_res0.0-2.8_noBrks_len40-10000_R0.3_Xray_d2026_01_26_chains10549"
-    data_files:
-      - split: train
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-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc95.0_res0.0-4.0_noBrks_len40-10000_R1.0_Xray+EM_d2026_01_26_chains57411.csv"
-  - config_name: "cullpdb_pc95.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains79005"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc95.0_res0.0-5.0_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains79005.csv"
-  - config_name: "cullpdb_pc95.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains62732"
-    data_files:
-      - split: train
-        path: "curated_csv/subsets/cullpdb_pc95.0_res0.0-5.0_noBrks_len40-10000_R1.0_Xray+Nmr+EM_d2026_01_26_chains62732.csv"
-task_categories:
-  - other
+        path: curated_csv/subsets/cullpdb_pc15.0_res0.0-1.0_len40-10000_R0.2_Xray_d2026_01_26_chains281.csv
+
 tags:
   - biology
   - protein