Question: I'm building an autonomous software engineering agent to resolve GitHub issues, but it wastes too many steps exploring irrelevant files and often commits to poor repair plans too early. Could you recommend papers on repository-level localization, planning, search, or program-analysis methods that make issue-resolution agents more efficient and more accurate on real-world software engineering benchmarks? Please only include papers published before November 1, 2025.

Answer: Improving automated issue resolution via comprehensive repository exploration

Answer: How to understand whole software repository

Answer: Swe-agent: Agent-computer interfaces enable automated software engineering

Answer: When large language models confront repository-level automatic program repair: How well they done?

Answer: Codeplan: Repository-level coding using llms and planning

Answer: A deep dive into large language models for automated bug localization and repair

Answer: Thinkrepair: Self-directed automated program repair

Answer: Sealign: Alignment training for software engineering agent

Answer: Unified software engineering agent as ai software engineer

Answer: Alibaba LingmaAgent: Improving Automated Issue Resolution via Comprehensive Repository Exploration

Answer: AutoCodeRover: Autonomous Program Improvement

Answer: Issue Localization via LLM-Driven Iterative Code Graph Searching

Answer: RepoMaster: Autonomous Exploration and Understanding of GitHub Repositories for Complex Task Solving

Answer: Enhancing Fault Localization Through Ordered Code Analysis with LLM Agents and Self-Reflection

Answer: SpecRover: Code Intent Extraction via LLMs

Answer: Enhancing repository-level software repair via repository-aware knowledge graphs

Answer: OrcaLoca: An LLM Agent Framework for Software Issue Localization

Answer: Bridging Bug Localization and Issue Fixing: A Hierarchical Localization Framework Leveraging Large Language Models

Answer: LocAgent: Graph-Guided LLM Agents for Code Localization

Answer: Agentless: Demystifying LLM-based Software Engineering Agents

Answer: CodeR: Issue Resolving with Multi-Agent and Task Graphs

Answer: Prometheus: Towards Long-Horizon Codebase Navigation for Repository-Level Problem Solving

Answer: SWE-Exp: Experience-Driven Software Issue Resolution

Answer: SWE-Search: Enhancing Software Agents with Monte Carlo Tree Search and Iterative Refinement

Answer: SWE-Debate: Competitive Multi-Agent Debate for Software Issue Resolution

Answer: PatchPilot: A Cost-Efficient Software Engineering Agent with Early Attempts on Formal Verification

Answer: TDFlow: Agentic Workflows for Test Driven Development

Answer: Training Software Engineering Agents and Verifiers with SWE-Gym

Answer: R2E-Gym: Procedural Environments and Hybrid Verifiers for Scaling Open-Weights SWE Agents

Answer: Kimi-Dev: Agentless Training as Skill Prior for SWE-Agents

Answer: AgentFL: Scaling LLM-based Fault Localization to Project-Level Context

Answer: ContrastRepair: Enhancing Conversation-Based Automated Program Repair via Contrastive Test Case Pairs

Answer: Evaluating Agent-based Program Repair at Google

Answer: CodeAgent: Enhancing Code Generation with Tool-Integrated Agent Systems for Real-World Repo-level Coding Challenges

Answer: Self-collaboration Code Generation via ChatGPT

Answer: Enhancing LLM-Based Automated Program Repair with Design Rationales

Answer: RepoGraph: Enhancing AI Software Engineering with Repository-level Code Graph

Answer: Language Agent Tree Search Unifies Reasoning Acting and Planning in Language Models

Answer: Guiding Language Models of Code with Global Context using Monitors

Answer: ML-Bench: Evaluating Large Language Models and Agents for Machine Learning Tasks on Repository-Level Code

Answer: Lingma SWE-GPT: An Open Development-Process-Centric Language Model for Automated Software Improvement

Answer: RESTORE: Retrospective Fault Localization Enhancing Automated Program Repair

Answer: Applied Sciences, Vol. 13, Pages 8519: Code Similarity and Location-Awareness Automatic Program Repair

Answer: CodexGraph: Bridging Large Language Models and Code Repositories via Code Graph Databases

Answer: RAP-Gen: Retrieval-Augmented Patch Generation with CodeT5 for Automatic Program Repair

Answer: SWE-bench-java: A GitHub Issue Resolving Benchmark for Java

Answer: R2C2-Coder: Enhancing and Benchmarking Real-world Repository-level Code Completion Abilities of Code Large Language Models

Answer: Semantics-Aligned, Curriculum-Driven, and Reasoning-Enhanced Vulnerability Repair Framework

Answer: Extracting Conceptual Knowledge to Locate Software Issues

Answer: Harnessing Evolution for Multi-Hunk Program Repair

Answer: RepoBench: Benchmarking Repository-Level Code Auto-Completion Systems

Answer: SuperCoder2.0: Technical Report on Exploring the feasibility of LLMs as Autonomous Programmer

Answer: Knowledge Graph Based Repository-Level Code Generation

Answer: Dataflow-Guided Retrieval Augmentation for Repository-Level Code Completion

Answer: Guided Search Strategies in Non-Serializable Environments with Applications to Software Engineering Agents

Answer: Dynamic Benchmark Construction for Evaluating Large Language Models on Real-World Codes

Answer: Better Context Makes Better Code Language Models: A Case Study on Function Call Argument Completion

Answer: Learning Syntactic Program Transformations from Examples

Engineering and Technology


Question: Could you help me find papers on scientific literature search, academic paper retrieval, or question answering over scientific papers that were published in ACL 2024 or EMNLP 2024 proceedings (including Findings)? I am especially interested in benchmarks, datasets, and retrieval or indexing methods for scholarly search.

Answer: LitSearch: A Retrieval Benchmark for Scientific Literature Search

Answer: M3SCIQA: A Multi-Modal Multi-Document Scientific QA Benchmark for Evaluating Foundation Models

Answer: Knowledge Navigator: LLM-guided Browsing Framework for Exploratory Search in Scientific Literature

Answer: CHIME: LLM-Assisted Hierarchical Organization of Scientific Studies for Literature Review Support

Answer: Taxonomy-guided Semantic Indexing for Academic Paper Search

Answer: SymTax: Symbiotic Relationship and Taxonomy Fusion for Effective Citation Recommendation

Answer: DALK: Dynamic Co-Augmentation of LLMs and KG to answer Alzheimer’s Disease Questions with Scientific Literature

Answer: Multimodal ArXiv: A Dataset for Improving Scientific Comprehension of Large Vision-Language Models

Answer: Referral Augmentation for Zero-Shot Information Retrieval

Answer: SciDQA: A Deep Reading Comprehension Dataset over Scientific Papers

Engineering and Technology


Question: Please help me find papers on Higgs boson production in association with W boson, or closely related VH production with a clear WH component, at the LHC with 13 TeV Run 2 data and measured by the ATLAS or CMS collaborations. Prefer studies that discuss background estimation or modeling and compare results with Standard Model predictions, even if the abstract does not explicitly state NLO QCD accuracy.

Answer: Study of High-Transverse-Momentum Higgs Boson Production in Association with a Vector Boson in the $ qqbb $ Final State with the ATLAS Detector

Answer: Measurements of WH and ZH production in the H → bb¯ decay channel in pp collisions at 13 TeV with the ATLAS detector

Answer: Measurements of WH and ZH production with Higgs boson decays into bottom quarks and direct constraints on the charm Yukawa coupling in 13 TeV pp collisions with the ATLAS detector

Answer: Measurement of the associated production of a Higgs boson decaying into b-quarks with a vector boson at high transverse momentum in pp collisions at s=13 TeV with the ATLAS detector

Answer: Measurements of the Higgs boson production cross section and couplings in the W boson pair decay channel in proton-proton collisions at sqrt(s)=13 TeV

Answer: Measurements of the production cross-sections of a Higgs boson in association with a vector boson and decaying into WW* with the ATLAS detector at √s = 13 TeV

Answer: Measurement of simplified template cross sections of the Higgs boson produced in association with W or Z bosons in the H → b b̄ decay channel in proton-proton collisions at √s = 13 TeV

Answer: Measurement of the associated production of a Higgs boson decaying into b-quarks with a vector boson at high transverse momentum in pp collisions at √s = 13 TeV with the ATLAS detector

Answer: Measurement of VH, H→b b̄ production as a function of the vector-boson transverse momentum in 13 TeV pp collisions with the ATLAS detector

Answer: Observation of H → b b̄ decays and VH production with the ATLAS detector

Answer: Observation of Higgs boson decay to bottom quarks

Answer: Measurement of the production cross section for a Higgs boson in association with a vector boson in the H → WW* → ℓνℓν channel in pp collisions at √s = 13 TeV with the ATLAS detector

Answer: Measurement of simplified template cross sections of the Higgs boson produced in association with W or Z bosons in the H $\to$ $\mathrm{b\bar{b}}$ decay channel in proton-proton collisions at $\sqrt{s}$ = 13 TeV

Answer: Search for Higgs boson decay to a charm quark-antiquark pair in proton-proton collisions at $\sqrt{s}$ = 13 TeV

Answer: Determination of the relative sign of the Higgs boson couplings to $W$ and $Z$ bosons using $WH$ production via vector-boson fusion with the ATLAS detector

Answer: Study of WH production through vector boson scattering and extraction of the relative sign of the W and Z couplings to the Higgs boson in proton-proton collisions at $\sqrt{s}$ = 13 TeV

Answer: Measurements of the Higgs boson production cross section and couplings in the W boson pair decay channel in proton-proton collisions at $\sqrt{s}$ = 13 TeV

Fundamental Sciences


Question: Please help me find papers on two-dimensional van der Waals ferromagnetic materials that study the anomalous Hall effect through low-temperature electronic transport measurements, and preferably analyze intrinsic Berry-curvature-related mechanisms, even if the paper does not explicitly use first-principles DFT.

Answer: Anomalous Hall effect induced by Berry curvature in the topological nodal-line van der Waals ferromagnet

Answer: Large anomalous Hall current induced by topological nodal lines in a ferromagnetic van der Waals semimetal

Answer: Spin-reorientation driven emergent phases and unconventional magnetotransport in quasi-2D vdW ferromagnet Fe4GeTe2

Answer: Microscopic mechanisms of Strong Electron Scattering and Giant Anomalous Hall Effect in high-Curie-temperature Fe3GaTe2 van der Waals Films

Answer: Anomalous Hall effect induced by Berry curvature in topological nodal-line van der Waals ferromagnet Fe4GeTe2

Answer: Pressure tuning of intrinsic and extrinsic sources to the anomalous Hall effect in CrGeTe3 as a function of pressure

Answer: Disorder driven crossover between anomalous Hall regimes in Fe$_3$GaTe$_2$

Answer: Hard ferromagnetism in van der Waals Fe 3 GaTe 2 nanoflake down to monolayer

Answer: Anomalous Hall and Nernst effects in the Two-Dimensional ferromagnetic metal FePd2Te2

Answer: Pressure-induced large anomalous Hall effects in a layered ferromagnet CrSiTe 3

Answer: ZrTe2/CrTe2: an epitaxial van der Waals platform for spintronics

Answer: Unusual Anomalous Hall Effect in Two-Dimensional Ferromagnetic Cr7Te8

Answer: Unusual magnetotransport and anomalous Hall effect in quasi-two-dimensional van der Waals ferromagnet Fe$_4$GeTe$_2$

Fundamental Sciences


Question: Please help me find papers on repeating fast radio bursts (FRBs) that use polarization observations to constrain the magnetospheric environment of the source, and discuss their connection with magnetar progenitor models. CHIME-based studies are preferred, but other polarization observations are also acceptable.

Answer: Revealing the dynamic magnetoionic environments of repeating fast radio burst sources through multiyear polarimetric monitoring with CHIME/FRB

Answer: A large-scale magneto-ionic fluctuation in the local environment of periodic fast radio burst source FRB 20180916B

Answer: Emission Properties of Periodic Fast Radio Bursts from the Motion of Magnetars: Testing Dynamical Models

Answer: Fast radio burst source properties from polarization measurements

Answer: An extreme magneto-ionic environment associated with the fast radio burst source FRB 121102

Answer: Polarization Angle Orthogonal Jumps in Fast Radio Bursts

Fundamental Sciences


Question: Please help me find papers on ultracold strontium optical lattice atomic clocks that discuss blackbody radiation shifts, including uncertainty evaluation, correction, or related analysis, together with experimental frequency measurements and comparison with theoretical shift calculations.

Answer: A strontium lattice clock with reduced blackbody radiation shift

Answer: A cryogenic strontium lattice clock

Answer: Transportable strontium lattice clock with 4 × 10^-19 blackbody radiation shift uncertainty

Answer: Cryogenic optical lattice clocks

Answer: Cryogenic optical lattice clocks with a relative frequency difference of $1\times 10^{-18}$

Answer: Systematic evaluation of an atomic clock at 2 × 10−18 total uncertainty

Answer: JILA SrI Optical Lattice Clock with Uncertainty of $2.0 \times 10^{-18}$

Answer: A strontium lattice clock with $3 \times 10^{-17}$ inaccuracy and its frequency

Answer: An Optical Lattice Clock with Accuracy and Stability at the $10^{-18}$ Level

Answer: Geodesy and metrology with a transportable optical clock

Answer: Realization of a time-scale with an accurate optical lattice clock

Answer: Optical to microwave clock frequency ratios with a nearly continuous strontium optical lattice clock

Answer: Frequency ratios of Sr, Yb and Hg based optical lattice clocks and their applications

Fundamental Sciences


Question: I'm analyzing decay data from the BESIII experiment to search for signals of charged lepton flavor violation, but large hadronic backgrounds make it hard to distinguish new physics signals from standard model processes. Can you recommend papers with effective methods for background rejection and signal extraction in charmonium weak decay studies?

Answer: Search for the Charged Lepton Flavor Violating Decay J/psi-> e tau

Answer: Search for the charged lepton flavor violating decay

Answer: Search for the charmonium weak decay

Answer: Measurement of the singly Cabibbo-suppressed decay with Deep Learning

Answer: Search for the rare semi-leptonic decay J/ψ→D−e+νe + c.c.

Answer: Search for the charged lepton flavor violating decay $J/\psi\to e\tau$

Answer: Search for the semi-muonic charmonium decay $J/\psi\to D^{-}\mu^{+}\nu_{\mu}+c.c.$

Fundamental Sciences


Question: I'm investigating the quantum anomalous Hall effect in magnetic-doped topological-insulator thin films, including Bi2Se3, (Bi,Sb)2Te3, and closely related systems, where defects and interface scattering lead to poor quantization at low temperatures. Can you recommend papers with strategies to improve sample quality and enhance the quantum anomalous Hall effect?

Answer: Magnetic modulation doping in topological insulators toward higher-temperature quantum anomalous Hall effect

Answer: Enhancing the quantum anomalous Hall effect by magnetic codoping in a topological insulator

Answer: Thickness Dependence of the Quantum Anomalous Hall Effect in Magnetic Topological Insulator Films

Answer: Observation of superparamagnetism in coexistence with quantum anomalous Hall C=±1 and C=0 Chern states

Answer: Quantum anomalous Hall effect driven by magnetic proximity coupling in all-telluride based heterostructure

Answer: Quantum anomalous Hall effect for metrology

Answer: Quantized anomalous Hall resistivity achieved in molecular beam epitaxy-grown MnBi2Te4 thin films

Answer: High temperature, gate-free quantum anomalous Hall effect with an active capping layer

Answer: From classical to quantum regime of topological surface states via defect engineering

Fundamental Sciences


Question: I'm trying to classify the formation channels of gravitational-wave binary black hole mergers, but traditional statistical methods fail to reveal hidden subpopulations in noisy observational data. Can you recommend papers that use unsupervised machine learning or other data-driven nonparametric methods to analyze binary black hole population origins?

Answer: Data-Driven Trends and Subpopulations in the Gravitational Wave Binary Black Hole Merger Population with UMAP

Answer: Unmodelled clustering methods for gravitational wave populations of compact binary mergers

Answer: Nonparametric inference of the population of compact binaries from gravitational-wave observations using binned gaussian processes

Answer: The Emergence of Structure in the Binary Black Hole Mass Distribution

Answer: A Parameter-Free Tour of the Binary Black Hole Population

Answer: Deep learning and Bayesian inference of gravitational-wave populations: Hierarchical black-hole mergers

Answer: PixelPop: High Resolution Nonparameteric Inference of Gravitational-Wave Populations in Multiple Dimensions

Answer: Evidence for the evolution of black hole mass function with redshift

Answer: (H)DPGMM: A Hierarchy of Dirichlet Process Gaussian Mixture Models for the inference of the black hole mass function

Answer: Flexible and Fast Estimation of Binary Merger Population Distributions with Adaptive KDE

Answer: Binary vision: The merging black hole binary mass distribution via iterative density estimation

Answer: Cover Your Basis: Comprehensive Data-Driven Characterization of the Binary Black Hole Population

Answer: Exploring the evolution of gravitational-wave emitters with efficient emulation: Constraining the origins of binary black holes using normalising flows

Answer: Searching for Binary Black Hole Subpopulations in Gravitational-wave Data Using Binned Gaussian Processes

Answer: Constraining Population III stellar demographics with next-generation gravitational-wave observatories

Answer: Resolving the Stellar-Collapse and Hierarchical-Merger origins of the Coalescing Black Holes

Answer: Cosmic Cousins: Identification of a Subpopulation of Binary Black Holes Consistent with Isolated Binary Evolution

Answer: Searching for structure in the binary black hole spin distribution

Answer: Exploration of features in the black hole mass spectrum inspired by non-parametric analyses of gravitational wave observations

Answer: Seeking Spinning Subpopulations of Black Hole Binaries via Iterative Density Estimation

Answer: Exploring Features in the Binary Black Hole Population

Fundamental Sciences


Question: I'm focusing on quantum entanglement generation using ultracold polar molecules, but dipole-dipole interactions and environmental decoherence strongly reduce entanglement fidelity. Can you recommend papers with experimental and theoretical schemes to stabilize entanglement in such systems?

Answer: iSWAP gate with polar molecules: Robustness criteria for entangling operations

Answer: Entanglement and iSWAP gate between molecular qubits

Answer: Robust nuclear spin entanglement via dipolar interactions in polar molecules

Answer: Long-lived entanglement of molecules in magic-wavelength optical tweezers

Answer: End-to-end entanglement in a polar-molecule array under intrinsic decoherence

Answer: Robust entangling gate for polar molecules using magnetic and microwave fields

Answer: Dynamical generation of spin squeezing in ultracold dipolar molecules

Answer: The iSWAP gate with polar molecules: Robustness criteria for entangling operations

Answer: A robust entangling gate for polar molecules using magnetic and microwave fields

Answer: Dipolar Exchange Quantum Logic Gate with Polar Molecules

Answer: Quantum computation in a hybrid array of molecules and Rydberg atoms

Answer: Sub-millisecond Entanglement and iSWAP Gate between Molecular Qubits

Answer: Infrared-dressed entanglement of cold open-shell polar molecules for universal matchgate quantum computing

Fundamental Sciences