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README.md
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data_files:
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- split: train
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path: data/train-*
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---
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data_files:
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- split: train
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path: data/train-*
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license: cc-by-4.0
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task_categories:
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- image-segmentation
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size_categories:
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- n<1K
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---
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# Alpine Grassland Root Segmentation
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92 root images (2550x2196) with manual binary root/background masks from the 'Grassland' dataset, collected in alpine grasslands during a study on root growth and soil function. It is one of the nine root imaging datasets in a benchmark of 21 Transformer and ConvNet architectures for root segmentation. Images keep their image series (BidmerN, BidmerS, Phytotron2021) and the record's U-Net training/validation split. The dataset contains 92 images with pixel-level mask annotations.
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This dataset is indexed on https://project-agml.github.io/ as part of the AgML python library.
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The original train/test/val split has been preserved in the `split` column.
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## Citation
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```bibtex
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@article{smith2026systematic,
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title={A systematic comparison of transformers and ConvNets for root segmentation across nine datasets},
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author={Smith, Abraham George and Lamprinidis, Sotiris and Seethepalli, Anand and York, Larry M. and Han, Eusun and Möhl, Patrick and Boulata, Kyriaki and Thorup-Kristensen, Kristian and Petersen, Jens},
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journal={Plant Methods},
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volume={22},
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pages={52},
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year={2026},
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publisher={BioMed Central}
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}
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```
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The dataset itself can be cited as:
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Möhl, P., von Büren, R. S., & Hiltbrunner, E. (2025). *Growth of alpine grassland will start and stop earlier under climate warming (dataset)* [Dataset]. figshare. https://doi.org/10.6084/M9.FIGSHARE.20440497.V2
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*This dataset was reformatted from its original format to match HuggingFace standards.*
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