from __future__ import annotations from pathlib import Path from typing import Dict def read_fasta(path: str | Path) -> Dict[str, str]: """Read FASTA entries into mapping of record id to sequence.""" source = Path(path) records: Dict[str, str] = {} current_id = None current_seq: list[str] = [] for line in source.read_text(encoding="utf-8").splitlines(): line = line.strip() if not line: continue if line.startswith(">"): # FASTA header if current_id is not None: records[current_id] = "".join(current_seq) current_id = line[1:].split()[0] current_seq = [] else: current_seq.append(line) if current_id is not None: records[current_id] = "".join(current_seq) return records