from __future__ import annotations import argparse from pathlib import Path import sys ROOT_DIR = Path(__file__).resolve().parents[1] if str(ROOT_DIR) not in sys.path: sys.path.insert(0, str(ROOT_DIR)) import pandas as pd def main() -> int: parser = argparse.ArgumentParser(description="Rescore docking batch with interface proxy") parser.add_argument("--input", required=True) parser.add_argument("--output", required=True) parser.add_argument("--interface-weight", type=float, default=1.0) args = parser.parse_args() df = pd.read_csv(args.input) if "interface_contact_proxy" not in df.columns: df["interface_contact_proxy"] = (-df["docking_score"]).clip(lower=0) / 10.0 df["final_score"] = df["docking_score"] - args.interface_weight * df["interface_contact_proxy"] out = Path(args.output) out.parent.mkdir(parents=True, exist_ok=True) df.to_csv(out, index=False) return 0 if __name__ == "__main__": raise SystemExit(main())