Hugging Face's logo

Datasets:
RomeroLab-Duke
/
af3-mmseqs-db

Dataset card Files
xet
 Community
autobio commited on
Commit
7773605
·
verified ·
1 Parent(s): 382f9df

Add files using upload-large-folder tool

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. .gitattributes +9 -0
  2. mmseqs/mgnify_padded.dbtype.zst +3 -0
  3. mmseqs/mgnify_padded.index.zst +3 -0
  4. mmseqs/mgnify_padded.zst.part00 +3 -0
  5. mmseqs/mgnify_padded.zst.part01 +3 -0
  6. mmseqs/mgnify_padded_h.dbtype.zst +3 -0
  7. mmseqs/mgnify_padded_h.zst +3 -0
  8. mmseqs/pdb_seqres_padded.dbtype.zst +3 -0
  9. mmseqs/pdb_seqres_padded.index.zst +3 -0
  10. mmseqs/pdb_seqres_padded.zst +3 -0
  11. mmseqs/pdb_seqres_padded_h.dbtype.zst +3 -0
  12. mmseqs/pdb_seqres_padded_h.index.zst +3 -0
  13. mmseqs/pdb_seqres_padded_h.zst +3 -0
  14. mmseqs/small_bfd_padded.dbtype.zst +3 -0
  15. mmseqs/small_bfd_padded.index.zst +3 -0
  16. mmseqs/small_bfd_padded.lookup.zst +3 -0
  17. mmseqs/small_bfd_padded_h.dbtype.zst +3 -0
  18. mmseqs/small_bfd_padded_h.zst +3 -0
  19. mmseqs/uniprot_padded.index.zst +3 -0
  20. mmseqs/uniprot_padded.lookup.zst +3 -0
  21. mmseqs/uniprot_padded_h.dbtype.zst +3 -0
  22. mmseqs/uniprot_padded_h.index.zst +3 -0
  23. mmseqs/uniref90_padded.dbtype.zst +3 -0
  24. mmseqs/uniref90_padded.index.zst +3 -0
  25. mmseqs/uniref90_padded.lookup.zst +3 -0
  26. mmseqs/uniref90_padded_h.index.zst +3 -0
  27. mmseqs/uniref90_padded_h.zst +3 -0
  28. mmseqs_rna/nt_rna.idx.0.zst +3 -0
  29. mmseqs_rna/nt_rna.idx.15.zst.part00 +3 -0
  30. mmseqs_rna/nt_rna.idx.17.zst.part01 +3 -0
  31. mmseqs_rna/nt_rna.idx.2.zst.part01 +3 -0
  32. mmseqs_rna/nt_rna.idx.3.zst.part00 +3 -0
  33. mmseqs_rna/nt_rna.idx.7.zst.part00 +3 -0
  34. mmseqs_rna/nt_rna.idx.7.zst.part01 +3 -0
  35. mmseqs_rna/nt_rna.idx.8.zst.part00 +3 -0
  36. mmseqs_rna/nt_rna.idx.dbtype.zst +3 -0
  37. mmseqs_rna/nt_rna.idx.index.zst +3 -0
  38. mmseqs_rna/nt_rna.index.zst +3 -0
  39. mmseqs_rna/nt_rna.lookup.zst +3 -0
  40. mmseqs_rna/nt_rna.source.zst +3 -0
  41. mmseqs_rna/nt_rna_h.index.zst +3 -0
  42. mmseqs_rna/rfam.dbtype.zst +3 -0
  43. mmseqs_rna/rfam.index.zst +3 -0
  44. mmseqs_rna/rfam.lookup.zst +3 -0
  45. mmseqs_rna/rfam_h.dbtype.zst +3 -0
  46. mmseqs_rna/rfam_h.index.zst +3 -0
  47. mmseqs_rna/rnacentral.idx.0.zst +3 -0
  48. mmseqs_rna/rnacentral.idx.14.zst +3 -0
  49. mmseqs_rna/rnacentral.lookup.zst +3 -0
  50. mmseqs_rna/rnacentral.source.zst +3 -0
.gitattributes CHANGED
@@ -130,3 +130,12 @@ mmseqs_rna/nt_rna.idx.4.zst.part01 filter=lfs diff=lfs merge=lfs -text
130
  mmseqs_rna/nt_rna.idx.2.zst.part00 filter=lfs diff=lfs merge=lfs -text
131
  nt_rna_2023_02_23_clust_seq_id_90_cov_80_rep_seq.fasta filter=lfs diff=lfs merge=lfs -text
132
  mmseqs/uniprot_padded.zst.part00 filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
130
  mmseqs_rna/nt_rna.idx.2.zst.part00 filter=lfs diff=lfs merge=lfs -text
131
  nt_rna_2023_02_23_clust_seq_id_90_cov_80_rep_seq.fasta filter=lfs diff=lfs merge=lfs -text
132
  mmseqs/uniprot_padded.zst.part00 filter=lfs diff=lfs merge=lfs -text
133
+ mmseqs/mgnify_padded.zst.part01 filter=lfs diff=lfs merge=lfs -text
134
+ mmseqs/mgnify_padded.zst.part00 filter=lfs diff=lfs merge=lfs -text
135
+ mmseqs_rna/nt_rna.idx.17.zst.part01 filter=lfs diff=lfs merge=lfs -text
136
+ mmseqs_rna/nt_rna.idx.8.zst.part00 filter=lfs diff=lfs merge=lfs -text
137
+ mmseqs_rna/nt_rna.idx.2.zst.part01 filter=lfs diff=lfs merge=lfs -text
138
+ mmseqs_rna/nt_rna.idx.3.zst.part00 filter=lfs diff=lfs merge=lfs -text
139
+ mmseqs_rna/nt_rna.idx.7.zst.part00 filter=lfs diff=lfs merge=lfs -text
140
+ mmseqs_rna/nt_rna.idx.15.zst.part00 filter=lfs diff=lfs merge=lfs -text
141
+ mmseqs_rna/nt_rna.idx.7.zst.part01 filter=lfs diff=lfs merge=lfs -text
mmseqs/mgnify_padded.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ac280ba8220eebc68e7ea569a325cb257e304de908f07608dbc276674a528c53
3
+ size 17
mmseqs/mgnify_padded.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:822346e15077fb73e8f41162d89da9b6cf845427a9c5ad00975f6bf3926adbcb
3
+ size 1071893928
mmseqs/mgnify_padded.zst.part00 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c87ca92b4225f478dee7301d52ce613bb363e45377cd68cfb432b6c7d4765873
3
+ size 21474836480
mmseqs/mgnify_padded.zst.part01 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4a398d7461471288ed1a7abe3c537530ac57ad8610f4ba0d95d31b1ea7e1065b
3
+ size 21474836480
mmseqs/mgnify_padded_h.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:778ad50268a76b81b6b158d5faef43615919d30a2df5105fcd88a6e26fc70c01
3
+ size 17
mmseqs/mgnify_padded_h.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4a2e59b951b67d3a341c6f3ad2901b2b48c6ea940dedb0bd334b4d8c4e131726
3
+ size 3729813347
mmseqs/pdb_seqres_padded.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ac280ba8220eebc68e7ea569a325cb257e304de908f07608dbc276674a528c53
3
+ size 17
mmseqs/pdb_seqres_padded.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e0396890bb2c5bd698f346c2a603b8be14a1df1f8361ff9d3cc9432e864d683d
3
+ size 2275338
mmseqs/pdb_seqres_padded.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f73bbcbac25f282c8b996efe0e3e037aa5be225571fbce325577e201b6cda335
3
+ size 13016901
mmseqs/pdb_seqres_padded_h.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:778ad50268a76b81b6b158d5faef43615919d30a2df5105fcd88a6e26fc70c01
3
+ size 17
mmseqs/pdb_seqres_padded_h.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1fe571e3472fb6921dfd5412365d17ac591780ac72276c0fa5d931f6c31eb8c5
3
+ size 4179569
mmseqs/pdb_seqres_padded_h.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:41bc408ac025a285510f895981a030ee0dbf7a8f809d3d0d4fde7394f7ebe7ad
3
+ size 4344382
mmseqs/small_bfd_padded.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ac280ba8220eebc68e7ea569a325cb257e304de908f07608dbc276674a528c53
3
+ size 17
mmseqs/small_bfd_padded.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:56ed1146bd6397cc46232202b92d7747b15d06b80e836e9a0c7c2a9ab413ec70
3
+ size 128480082
mmseqs/small_bfd_padded.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c4630706c0e6c1a8d0c4c2cd3c40be00aa15845913ec9a9cbbd6e91dadd44615
3
+ size 760695162
mmseqs/small_bfd_padded_h.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:778ad50268a76b81b6b158d5faef43615919d30a2df5105fcd88a6e26fc70c01
3
+ size 17
mmseqs/small_bfd_padded_h.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:972c0e47eae453702e7883742c7d562e485adb4e1809d8ca6641202db5f291d9
3
+ size 440047300
mmseqs/uniprot_padded.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e9ecae51837e1ba427d13304bea1a3c42e758a70244a4283b0c3c734f7846a4b
3
+ size 434928830
mmseqs/uniprot_padded.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d9b71ce842a1724174a00f3fe69ecf79464a3c554e54ce08ce53ff4a8af122f3
3
+ size 2581533219
mmseqs/uniprot_padded_h.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:778ad50268a76b81b6b158d5faef43615919d30a2df5105fcd88a6e26fc70c01
3
+ size 17
mmseqs/uniprot_padded_h.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4542e8e5efbc49bcaf5d20cccfdbf255e159ebef8501a8bb04b84833539b74af
3
+ size 1590620149
mmseqs/uniref90_padded.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ac280ba8220eebc68e7ea569a325cb257e304de908f07608dbc276674a528c53
3
+ size 17
mmseqs/uniref90_padded.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:400fec08bf4715cebe0fa7e6be5ba0b532ba08b0244457e45c8247407a882409
3
+ size 316021687
mmseqs/uniref90_padded.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:783de7b2030592ee3cdf06125ad2ed297aad2c8b82f68c603c4e850de2fd7997
3
+ size 1472266210
mmseqs/uniref90_padded_h.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b0d9b5a8150f343db59b06dd2d93731fca485aeace906111aacdbe3134b579d8
3
+ size 1095212081
mmseqs/uniref90_padded_h.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f3e0a0105fd6133596df395fa9a671a1190cbad6729222d5919215e922117a76
3
+ size 3191775475
mmseqs_rna/nt_rna.idx.0.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:724b47be7b35daf48ea6472cff987665dcd773fbc9136936c1b8d378ef2db18c
3
+ size 2207
mmseqs_rna/nt_rna.idx.15.zst.part00 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2a0c7be9fd69b7feda390dc6ffa2a13f9ab0b7bc2ad6264310b0141e628df33b
3
+ size 21474836480
mmseqs_rna/nt_rna.idx.17.zst.part01 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4c8e01828b2600b691db1923218c186f7e69575acd3b851c2b79ad80a00475d7
3
+ size 4026562328
mmseqs_rna/nt_rna.idx.2.zst.part01 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d5cd997430c7b58960aaba33b7723ed438a0453ccc57777971a91bd7305b27a9
3
+ size 4025042876
mmseqs_rna/nt_rna.idx.3.zst.part00 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:02daa72aa311d53133c09c2094940f4a1ff666d24f72a7c3da98fa204a42e15c
3
+ size 21474836480
mmseqs_rna/nt_rna.idx.7.zst.part00 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ed67610e6fc099e114660b77ef05b4f8cd8d1efdb90d9e729cbcf884f16f227b
3
+ size 21474836480
mmseqs_rna/nt_rna.idx.7.zst.part01 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:96b613cad022a07f4ef414415b9f12f0b0fe8ce90ac5642a5387917ee87531ca
3
+ size 4023873573
mmseqs_rna/nt_rna.idx.8.zst.part00 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9ce27f52d093386e4ef7bd407b91587e789b68d56aaf36055fd0f759fc1643f9
3
+ size 21474836480
mmseqs_rna/nt_rna.idx.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c0fabfc2c295af9ee869dc8553054bfb1cecd9f9541b49e90c798249a7015f02
3
+ size 17
mmseqs_rna/nt_rna.idx.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:99e992545902b4914a81343279a7a868fd9b98af8608942a10cf97c6bd1f872f
3
+ size 1140
mmseqs_rna/nt_rna.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9c9288b05a4ccd9cca675731a735b9edbcee04ff38df08428ab0ca4708fe05ea
3
+ size 336160578
mmseqs_rna/nt_rna.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:636509888958d8d76c81234f80e209bea31d50f79b0101d18bdc93f9ccb70701
3
+ size 259692880
mmseqs_rna/nt_rna.source.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0437e3ec8f07f46397979248ab94f7b9905acf4bdb50405deff6d1019afb43ce
3
+ size 70
mmseqs_rna/nt_rna_h.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d48ff05fe824747c78f6255dc764deb2b38e0f04ebedb6cd28e3094b5e37a552
3
+ size 263296704
mmseqs_rna/rfam.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:74654a3d55703ec7ebcb192cf3c0d9b16f2611435298ec8db2596a2013dfc731
3
+ size 17
mmseqs_rna/rfam.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e2c4015a4db3f6921c9f7d0dc7b37c29ef52524c79626ed710586cc755c75a0f
3
+ size 6081057
mmseqs_rna/rfam.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bf5e09dfadd71e9cf0d66b9fc972e7c05f69f93be395cbd707f699e01540b362
3
+ size 11951249
mmseqs_rna/rfam_h.dbtype.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:778ad50268a76b81b6b158d5faef43615919d30a2df5105fcd88a6e26fc70c01
3
+ size 17
mmseqs_rna/rfam_h.index.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cb3da78e7eade274ff874063a88c04b48dd67c64b9af79845e4d1892b7160b87
3
+ size 6047966
mmseqs_rna/rnacentral.idx.0.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:724b47be7b35daf48ea6472cff987665dcd773fbc9136936c1b8d378ef2db18c
3
+ size 2207
mmseqs_rna/rnacentral.idx.14.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:73d1772df785000d47e4001c9474b6d75cdb0eac392319c14eb302ee24994319
3
+ size 4173693580
mmseqs_rna/rnacentral.lookup.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f101c2daf0726b38f732f5ec91386fc1575fa1a7c3b6d748860485f786298e04
3
+ size 106865789
mmseqs_rna/rnacentral.source.zst ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7090d79fd803082363399704c8623dbfd595a36f431787330950a8eac5fad841
3
+ size 65