add predicted structures set
Browse files- src/03.1_upload_data.py +18 -0
src/03.1_upload_data.py
CHANGED
|
@@ -123,3 +123,21 @@ dataset.push_to_hub(
|
|
| 123 |
config_name = "dataset3_single_cv",
|
| 124 |
data_dir = "datase3_single_cv/data",
|
| 125 |
commit_message = "Upload dataset3_single_cv")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 123 |
config_name = "dataset3_single_cv",
|
| 124 |
data_dir = "datase3_single_cv/data",
|
| 125 |
commit_message = "Upload dataset3_single_cv")
|
| 126 |
+
|
| 127 |
+
|
| 128 |
+
##### AlphaFold2_model_PDBs ####
|
| 129 |
+
dataset = datasets.load_dataset(
|
| 130 |
+
"parquet",
|
| 131 |
+
name = "AlphaFold_model_PDBs",
|
| 132 |
+
data_dir = "./intermediate",
|
| 133 |
+
data_files = {
|
| 134 |
+
"train" : "AlphaFold_model_PDBs.parquet"},
|
| 135 |
+
cache_dir = "/scratch/maom_root/maom0/maom",
|
| 136 |
+
keep_in_memory = True)
|
| 137 |
+
|
| 138 |
+
dataset.push_to_hub(
|
| 139 |
+
repo_id = "maom/MegaScale",
|
| 140 |
+
config_name = "AlphaFold_model_PDBs",
|
| 141 |
+
data_dir = "AlphaFold_model_PDBs/data",
|
| 142 |
+
commit_message = "Upload AlphaFold_model_PDBs")
|
| 143 |
+
|