pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8k2w | N | null | 0 | R | protein | null | soluble cytochrome b562,c-x-c chemokine receptor type 3,kappa-type opioid receptor | SIGNALING PROTEIN | 11/29/23 | Structure of CXCR3 complexed with antagonist AMG487 | Escherichia coli; Homo sapiens; Lama glama | lama glama | null | escherichia coli, homo sapiens | Jiao, H.Z., Hu, H.L. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k2w/annotation/8k2w_N_VH.ann | null | sabdab_dataset/8k2w/imgt/8k2w_N_H.ann | null | sabdab_dataset/8k2w/sequence/8k2w_raw.pdb | sabdab_dataset/8k2w/sequence/8k2w_N_VH.fa | null | sabdab_dataset/8k2w/structure/8k2w.pdb | sabdab_dataset/8k2w/structure/chothia/8k2w.pdb | false | false | train |
8k2x | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 11/29/23 | CXCR3-DNGi complex activated by CXCL10 | Escherichia coli; Homo sapiens; Oplophorus gracilirostris | oplophorus gracilirostris | null | homo sapiens | homo sapiens | Jiao, H.Z., Hu, H.L. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k2x/abangle/8k2x.abangle | sabdab_dataset/8k2x/annotation/8k2x_S_VH.ann | sabdab_dataset/8k2x/annotation/8k2x_S_VL.ann | sabdab_dataset/8k2x/imgt/8k2x_S_H.ann | sabdab_dataset/8k2x/imgt/8k2x_S_L.ann | sabdab_dataset/8k2x/sequence/8k2x_raw.pdb | sabdab_dataset/8k2x/sequence/8k2x_S_VH.fa | sabdab_dataset/8k2x/sequence/8k2x_S_VL.fa | sabdab_dataset/8k2x/structure/8k2x.pdb | sabdab_dataset/8k2x/structure/chothia/8k2x.pdb | false | false | validation |
8k33 | B | null | 0 | A | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_B_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_B_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_B_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | D | null | 0 | C | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_D_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_D_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_D_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | F | null | 0 | E | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_F_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_F_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_F_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | H | null | 0 | G | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_H_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_H_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_H_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | J | null | 0 | I | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_J_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_J_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_J_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | M | null | 0 | L | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_M_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_M_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_M_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | O | null | 0 | N | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_O_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_O_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_O_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | test |
8k33 | Q | null | 0 | K | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_Q_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_Q_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_Q_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | R | null | 0 | P | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_R_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_R_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_R_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | test |
8k33 | T | null | 0 | Y | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_T_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_T_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_T_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | V | null | 0 | U | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_V_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_V_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_V_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k33 | X | null | 0 | W | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody1 complex | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | Cheng, S. | 2.13 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k33/annotation/8k33_X_VH.ann | null | sabdab_dataset/8k33/imgt/8k33_X_H.ann | null | sabdab_dataset/8k33/sequence/8k33_raw.pdb | sabdab_dataset/8k33/sequence/8k33_X_VH.fa | null | sabdab_dataset/8k33/structure/8k33.pdb | sabdab_dataset/8k33/structure/chothia/8k33.pdb | false | false | train |
8k3a | B | null | 0 | A | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody2 complex | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Cheng, S. | 2.74 | X-RAY DIFFRACTION | 0.256 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3a/annotation/8k3a_B_VH.ann | null | sabdab_dataset/8k3a/imgt/8k3a_B_H.ann | null | sabdab_dataset/8k3a/sequence/8k3a_raw.pdb | sabdab_dataset/8k3a/sequence/8k3a_B_VH.fa | null | sabdab_dataset/8k3a/structure/8k3a.pdb | sabdab_dataset/8k3a/structure/chothia/8k3a.pdb | false | false | train |
8k3c | C | D | 0 | B | protein | null | glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 05/01/24 | Nipah virus Attachment glycoprotein with 41-6 antibody fragment | Henipavirus nipahense; Homo sapiens | homo sapiens | homo sapiens | henipavirus nipahense | Sun, M.M. | 2.88 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8k3c/abangle/8k3c.abangle | sabdab_dataset/8k3c/annotation/8k3c_C_VH.ann | sabdab_dataset/8k3c/annotation/8k3c_D_VL.ann | sabdab_dataset/8k3c/imgt/8k3c_C_H.ann | sabdab_dataset/8k3c/imgt/8k3c_D_L.ann | sabdab_dataset/8k3c/sequence/8k3c_raw.pdb | sabdab_dataset/8k3c/sequence/8k3c_C_VH.fa | sabdab_dataset/8k3c/sequence/8k3c_D_VL.fa | sabdab_dataset/8k3c/structure/8k3c.pdb | sabdab_dataset/8k3c/structure/chothia/8k3c.pdb | false | false | train |
8k3k | D | null | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/24/24 | The crystal structure of nanobody Nb4 in complex with receptor binding domain (RBD) of BA.1 Spike protein | Severe acute respiratory syndrome coronavirus 2; synthetic construct | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Wang, H.Y., Xu, W.Q. | 2.43 | X-RAY DIFFRACTION | 0.269 | 0.224 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3k/annotation/8k3k_D_VH.ann | null | sabdab_dataset/8k3k/imgt/8k3k_D_H.ann | null | sabdab_dataset/8k3k/sequence/8k3k_raw.pdb | sabdab_dataset/8k3k/sequence/8k3k_D_VH.fa | null | sabdab_dataset/8k3k/structure/8k3k.pdb | sabdab_dataset/8k3k/structure/chothia/8k3k.pdb | true | true | train |
8k3l | B | null | 0 | A | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody3 complex | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Cheng, S., Liu, R., Ding, Y. | 2.3 | X-RAY DIFFRACTION | 0.235 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3l/annotation/8k3l_B_VH.ann | null | sabdab_dataset/8k3l/imgt/8k3l_B_H.ann | null | sabdab_dataset/8k3l/sequence/8k3l_raw.pdb | sabdab_dataset/8k3l/sequence/8k3l_B_VH.fa | null | sabdab_dataset/8k3l/structure/8k3l.pdb | sabdab_dataset/8k3l/structure/chothia/8k3l.pdb | false | false | validation |
8k3l | D | null | 0 | C | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody3 complex | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Cheng, S., Liu, R., Ding, Y. | 2.3 | X-RAY DIFFRACTION | 0.235 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3l/annotation/8k3l_D_VH.ann | null | sabdab_dataset/8k3l/imgt/8k3l_D_H.ann | null | sabdab_dataset/8k3l/sequence/8k3l_raw.pdb | sabdab_dataset/8k3l/sequence/8k3l_D_VH.fa | null | sabdab_dataset/8k3l/structure/8k3l.pdb | sabdab_dataset/8k3l/structure/chothia/8k3l.pdb | false | false | train |
8k3l | F | null | 0 | E | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody3 complex | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Cheng, S., Liu, R., Ding, Y. | 2.3 | X-RAY DIFFRACTION | 0.235 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3l/annotation/8k3l_F_VH.ann | null | sabdab_dataset/8k3l/imgt/8k3l_F_H.ann | null | sabdab_dataset/8k3l/sequence/8k3l_raw.pdb | sabdab_dataset/8k3l/sequence/8k3l_F_VH.fa | null | sabdab_dataset/8k3l/structure/8k3l.pdb | sabdab_dataset/8k3l/structure/chothia/8k3l.pdb | false | false | validation |
8k3l | H | null | 0 | G | protein | null | superoxide dismutase [cu-zn] | OXIDOREDUCTASE/IMMUNE SYSTEM | 07/17/24 | SOD1 and Nanobody3 complex | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Cheng, S., Liu, R., Ding, Y. | 2.3 | X-RAY DIFFRACTION | 0.235 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k3l/annotation/8k3l_H_VH.ann | null | sabdab_dataset/8k3l/imgt/8k3l_H_H.ann | null | sabdab_dataset/8k3l/sequence/8k3l_raw.pdb | sabdab_dataset/8k3l/sequence/8k3l_H_VH.fa | null | sabdab_dataset/8k3l/structure/8k3l.pdb | sabdab_dataset/8k3l/structure/chothia/8k3l.pdb | false | false | train |
8k3z | S | s | 0 | C | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | IMMUNE SYSTEM | 07/17/24 | Cryo-EM structure of CXCR4 in complex with CXCL12 | Homo sapiens; Vicugna pacos | vicugna pacos | null | homo sapiens | homo sapiens | Liu, Y.Z., Liu, A.J., Liao, Q.W., Ye, R.D. | 2.81 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k3z/abangle/8k3z.abangle | sabdab_dataset/8k3z/annotation/8k3z_S_VH.ann | sabdab_dataset/8k3z/annotation/8k3z_S_VL.ann | sabdab_dataset/8k3z/imgt/8k3z_S_H.ann | sabdab_dataset/8k3z/imgt/8k3z_S_L.ann | sabdab_dataset/8k3z/sequence/8k3z_raw.pdb | sabdab_dataset/8k3z/sequence/8k3z_S_VH.fa | sabdab_dataset/8k3z/sequence/8k3z_S_VL.fa | sabdab_dataset/8k3z/structure/8k3z.pdb | sabdab_dataset/8k3z/structure/chothia/8k3z.pdb | false | false | test |
8k45 | D | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.66 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k45/annotation/8k45_D_VH.ann | null | sabdab_dataset/8k45/imgt/8k45_D_H.ann | null | sabdab_dataset/8k45/sequence/8k45_raw.pdb | sabdab_dataset/8k45/sequence/8k45_D_VH.fa | null | sabdab_dataset/8k45/structure/8k45.pdb | sabdab_dataset/8k45/structure/chothia/8k45.pdb | false | false | train |
8k45 | E | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.66 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k45/annotation/8k45_E_VH.ann | null | sabdab_dataset/8k45/imgt/8k45_E_H.ann | null | sabdab_dataset/8k45/sequence/8k45_raw.pdb | sabdab_dataset/8k45/sequence/8k45_E_VH.fa | null | sabdab_dataset/8k45/structure/8k45.pdb | sabdab_dataset/8k45/structure/chothia/8k45.pdb | false | false | train |
8k46 | E | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.37 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k46/annotation/8k46_E_VH.ann | null | sabdab_dataset/8k46/imgt/8k46_E_H.ann | null | sabdab_dataset/8k46/sequence/8k46_raw.pdb | sabdab_dataset/8k46/sequence/8k46_E_VH.fa | null | sabdab_dataset/8k46/structure/8k46.pdb | sabdab_dataset/8k46/structure/chothia/8k46.pdb | false | false | train |
8k46 | G | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.37 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k46/annotation/8k46_G_VH.ann | null | sabdab_dataset/8k46/imgt/8k46_G_H.ann | null | sabdab_dataset/8k46/sequence/8k46_raw.pdb | sabdab_dataset/8k46/sequence/8k46_G_VH.fa | null | sabdab_dataset/8k46/structure/8k46.pdb | sabdab_dataset/8k46/structure/chothia/8k46.pdb | false | false | train |
8k46 | I | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.37 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k46/annotation/8k46_I_VH.ann | null | sabdab_dataset/8k46/imgt/8k46_I_H.ann | null | sabdab_dataset/8k46/sequence/8k46_raw.pdb | sabdab_dataset/8k46/sequence/8k46_I_VH.fa | null | sabdab_dataset/8k46/structure/8k46.pdb | sabdab_dataset/8k46/structure/chothia/8k46.pdb | false | false | train |
8k47 | I | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/13/23 | A potent and broad-spectrum neutralizing nanobody for SARS-CoV-2 viruses including all major Omicron strains | Severe acute respiratory syndrome coronavirus 2; Vicugna pacos | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Lu, Y., Gao, Y., Yao, H., Xu, W., Yang, H. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8k47/annotation/8k47_I_VH.ann | null | sabdab_dataset/8k47/imgt/8k47_I_H.ann | null | sabdab_dataset/8k47/sequence/8k47_raw.pdb | sabdab_dataset/8k47/sequence/8k47_I_VH.fa | null | sabdab_dataset/8k47/structure/8k47.pdb | sabdab_dataset/8k47/structure/chothia/8k47.pdb | false | false | train |
8k4n | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/25/23 | Structure of GPR34-Gi complex | Homo sapiens; synthetic construct | synthetic construct | null | homo sapiens | homo sapiens | Wong, T.S., Zeng, Z.C., Xiong, T.T., Gan, S.Y., He, G.D., Du, Y. | 2.83 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k4n/abangle/8k4n.abangle | sabdab_dataset/8k4n/annotation/8k4n_E_VH.ann | sabdab_dataset/8k4n/annotation/8k4n_E_VL.ann | sabdab_dataset/8k4n/imgt/8k4n_E_H.ann | sabdab_dataset/8k4n/imgt/8k4n_E_L.ann | sabdab_dataset/8k4n/sequence/8k4n_raw.pdb | sabdab_dataset/8k4n/sequence/8k4n_E_VH.fa | sabdab_dataset/8k4n/sequence/8k4n_E_VL.fa | sabdab_dataset/8k4n/structure/8k4n.pdb | sabdab_dataset/8k4n/structure/chothia/8k4n.pdb | false | false | train |
8k4q | B | null | 0 | A | protein | null | interleukin-4 receptor subunit alpha | CYTOKINE | 06/26/24 | Crystal structure of nanobody HuNb103 bound to human interleukin-4 receptor subunit alpha | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Ding, Y., Zhong, P.Y. | 2.59 | X-RAY DIFFRACTION | 0.280 | 0.222 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8k4q/annotation/8k4q_B_VH.ann | null | sabdab_dataset/8k4q/imgt/8k4q_B_H.ann | null | sabdab_dataset/8k4q/sequence/8k4q_raw.pdb | sabdab_dataset/8k4q/sequence/8k4q_B_VH.fa | null | sabdab_dataset/8k4q/structure/8k4q.pdb | sabdab_dataset/8k4q/structure/chothia/8k4q.pdb | true | true | train |
8k4q | D | null | 0 | C | protein | null | interleukin-4 receptor subunit alpha | CYTOKINE | 06/26/24 | Crystal structure of nanobody HuNb103 bound to human interleukin-4 receptor subunit alpha | Camelus dromedarius; Homo sapiens | camelus dromedarius | null | homo sapiens | Ding, Y., Zhong, P.Y. | 2.59 | X-RAY DIFFRACTION | 0.280 | 0.222 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8k4q/annotation/8k4q_D_VH.ann | null | sabdab_dataset/8k4q/imgt/8k4q_D_H.ann | null | sabdab_dataset/8k4q/sequence/8k4q_raw.pdb | sabdab_dataset/8k4q/sequence/8k4q_D_VH.fa | null | sabdab_dataset/8k4q/structure/8k4q.pdb | sabdab_dataset/8k4q/structure/chothia/8k4q.pdb | true | false | train |
8k4s | D | d | 0 | A | B | protein | protein | NA | NA | gs-mini-gq chimera | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 11/06/24 | CryoEM structure of Gq coupled MRGPRX4 with agonist DCA-3P | Aequorea victoria; Escherichia coli; Homo sapiens; Mus musculus | mus musculus | null | homo sapiens | homo sapiens | Yang, J., Fan, J.P., Lei, X.G. | 2.9 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k4s/abangle/8k4s.abangle | sabdab_dataset/8k4s/annotation/8k4s_D_VH.ann | sabdab_dataset/8k4s/annotation/8k4s_D_VL.ann | sabdab_dataset/8k4s/imgt/8k4s_D_H.ann | sabdab_dataset/8k4s/imgt/8k4s_D_L.ann | sabdab_dataset/8k4s/sequence/8k4s_raw.pdb | sabdab_dataset/8k4s/sequence/8k4s_D_VH.fa | sabdab_dataset/8k4s/sequence/8k4s_D_VL.fa | sabdab_dataset/8k4s/structure/8k4s.pdb | sabdab_dataset/8k4s/structure/chothia/8k4s.pdb | false | false | train |
8k5g | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/27/23 | Structure of the SARS-CoV-2 BA.1 RBD with UT28-RD | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, L., Kita, S., Anraku, Y., Maenaka, K. | 3.41 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8k5g/abangle/8k5g.abangle | sabdab_dataset/8k5g/annotation/8k5g_H_VH.ann | sabdab_dataset/8k5g/annotation/8k5g_L_VL.ann | sabdab_dataset/8k5g/imgt/8k5g_H_H.ann | sabdab_dataset/8k5g/imgt/8k5g_L_L.ann | sabdab_dataset/8k5g/sequence/8k5g_raw.pdb | sabdab_dataset/8k5g/sequence/8k5g_H_VH.fa | sabdab_dataset/8k5g/sequence/8k5g_L_VL.fa | sabdab_dataset/8k5g/structure/8k5g.pdb | sabdab_dataset/8k5g/structure/chothia/8k5g.pdb | false | false | train |
8k5h | H | L | 0 | B | A | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/27/23 | Structure of the SARS-CoV-2 BA.1 spike with UT28-RD | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Chen, L., Kita, S., Anraku, Y., Maenaka, K. | 3.22 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8k5h/abangle/8k5h.abangle | sabdab_dataset/8k5h/annotation/8k5h_H_VH.ann | sabdab_dataset/8k5h/annotation/8k5h_L_VL.ann | sabdab_dataset/8k5h/imgt/8k5h_H_H.ann | sabdab_dataset/8k5h/imgt/8k5h_L_L.ann | sabdab_dataset/8k5h/sequence/8k5h_raw.pdb | sabdab_dataset/8k5h/sequence/8k5h_H_VH.fa | sabdab_dataset/8k5h/sequence/8k5h_L_VL.fa | sabdab_dataset/8k5h/structure/8k5h.pdb | sabdab_dataset/8k5h/structure/chothia/8k5h.pdb | false | false | train |
8k6m | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/31/24 | Structural complex of neuropeptide Y receptor 1 | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Shen, S.Y., Zhao, C., Shao, Z.H. | 3.3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k6m/abangle/8k6m.abangle | sabdab_dataset/8k6m/annotation/8k6m_S_VH.ann | sabdab_dataset/8k6m/annotation/8k6m_S_VL.ann | sabdab_dataset/8k6m/imgt/8k6m_S_H.ann | sabdab_dataset/8k6m/imgt/8k6m_S_L.ann | sabdab_dataset/8k6m/sequence/8k6m_raw.pdb | sabdab_dataset/8k6m/sequence/8k6m_S_VH.fa | sabdab_dataset/8k6m/sequence/8k6m_S_VL.fa | sabdab_dataset/8k6m/structure/8k6m.pdb | sabdab_dataset/8k6m/structure/chothia/8k6m.pdb | false | false | test |
8k6n | S | s | 0 | A | C | B | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-2 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/31/24 | Structural complex of neuropeptide Y receptor 2 | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Shen, S.Y., Zhao, C., Shao, Z.H. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k6n/abangle/8k6n.abangle | sabdab_dataset/8k6n/annotation/8k6n_S_VH.ann | sabdab_dataset/8k6n/annotation/8k6n_S_VL.ann | sabdab_dataset/8k6n/imgt/8k6n_S_H.ann | sabdab_dataset/8k6n/imgt/8k6n_S_L.ann | sabdab_dataset/8k6n/sequence/8k6n_raw.pdb | sabdab_dataset/8k6n/sequence/8k6n_S_VH.fa | sabdab_dataset/8k6n/sequence/8k6n_S_VL.fa | sabdab_dataset/8k6n/structure/8k6n.pdb | sabdab_dataset/8k6n/structure/chothia/8k6n.pdb | false | false | train |
8k6o | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/31/24 | Structural complex of neuropeptide Y receptor 1 | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Shen, S.Y., Zhao, C., Shao, Z.H. | 3.3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k6o/abangle/8k6o.abangle | sabdab_dataset/8k6o/annotation/8k6o_S_VH.ann | sabdab_dataset/8k6o/annotation/8k6o_S_VL.ann | sabdab_dataset/8k6o/imgt/8k6o_S_H.ann | sabdab_dataset/8k6o/imgt/8k6o_S_L.ann | sabdab_dataset/8k6o/sequence/8k6o_raw.pdb | sabdab_dataset/8k6o/sequence/8k6o_S_VH.fa | sabdab_dataset/8k6o/sequence/8k6o_S_VL.fa | sabdab_dataset/8k6o/structure/8k6o.pdb | sabdab_dataset/8k6o/structure/chothia/8k6o.pdb | false | false | validation |
8k8j | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/14/24 | Cannabinoid Receptor 1 bound to Fenofibrate coupling MiniGsq and Nb35 Complex | Escherichia coli; Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | Tang, W.Q., Wang, T.X., Li, F.H., Wang, J.Y. | 2.88 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8k8j/annotation/8k8j_N_VH.ann | null | sabdab_dataset/8k8j/imgt/8k8j_N_H.ann | null | sabdab_dataset/8k8j/sequence/8k8j_raw.pdb | sabdab_dataset/8k8j/sequence/8k8j_N_VH.fa | null | sabdab_dataset/8k8j/structure/8k8j.pdb | sabdab_dataset/8k8j/structure/chothia/8k8j.pdb | false | false | test |
8k9b | A | B | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/31/24 | SARS-CoV-2 spike protein in complex with one S2H5 Fab | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8k9b/abangle/8k9b.abangle | sabdab_dataset/8k9b/annotation/8k9b_A_VH.ann | sabdab_dataset/8k9b/annotation/8k9b_B_VL.ann | sabdab_dataset/8k9b/imgt/8k9b_A_H.ann | sabdab_dataset/8k9b/imgt/8k9b_B_L.ann | sabdab_dataset/8k9b/sequence/8k9b_raw.pdb | sabdab_dataset/8k9b/sequence/8k9b_A_VH.fa | sabdab_dataset/8k9b/sequence/8k9b_B_VL.fa | sabdab_dataset/8k9b/structure/8k9b.pdb | sabdab_dataset/8k9b/structure/chothia/8k9b.pdb | false | false | train |
8k9j | A | B | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/31/24 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2 | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 6.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8k9j/abangle/8k9j.abangle | sabdab_dataset/8k9j/annotation/8k9j_A_VH.ann | sabdab_dataset/8k9j/annotation/8k9j_B_VL.ann | sabdab_dataset/8k9j/imgt/8k9j_A_H.ann | sabdab_dataset/8k9j/imgt/8k9j_B_L.ann | sabdab_dataset/8k9j/sequence/8k9j_raw.pdb | sabdab_dataset/8k9j/sequence/8k9j_A_VH.fa | sabdab_dataset/8k9j/sequence/8k9j_B_VL.fa | sabdab_dataset/8k9j/structure/8k9j.pdb | sabdab_dataset/8k9j/structure/chothia/8k9j.pdb | false | false | train |
8k9j | G | F | 0 | D | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/31/24 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2 | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 6.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8k9j/abangle/8k9j.abangle | sabdab_dataset/8k9j/annotation/8k9j_G_VH.ann | sabdab_dataset/8k9j/annotation/8k9j_F_VL.ann | sabdab_dataset/8k9j/imgt/8k9j_G_H.ann | sabdab_dataset/8k9j/imgt/8k9j_F_L.ann | sabdab_dataset/8k9j/sequence/8k9j_raw.pdb | sabdab_dataset/8k9j/sequence/8k9j_G_VH.fa | sabdab_dataset/8k9j/sequence/8k9j_F_VL.fa | sabdab_dataset/8k9j/structure/8k9j.pdb | sabdab_dataset/8k9j/structure/chothia/8k9j.pdb | false | false | validation |
8k9k | H | h | 0 | A | B | G | protein | protein | protein | NA | NA | NA | g protein subunit alpha i3 | guanine nucleotide binding protein, beta polypeptide 1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | SIGNALING PROTEIN | 05/29/24 | Full agonist-bound mu-type opioid receptor-G protein complex | Escherichia coli; Homo sapiens; Macaca mulatta; synthetic construct; SYNTHETIC CONSTRUCT | synthetic construct | null | macaca mulatta | homo sapiens | homo sapiens | Hisano, T., Uchikubo-Kamo, T., Shirouzu, M., Imai, S., Kaneko, S., Shimada, I. | 2.98 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k9k/abangle/8k9k.abangle | sabdab_dataset/8k9k/annotation/8k9k_H_VH.ann | sabdab_dataset/8k9k/annotation/8k9k_H_VL.ann | sabdab_dataset/8k9k/imgt/8k9k_H_H.ann | sabdab_dataset/8k9k/imgt/8k9k_H_L.ann | sabdab_dataset/8k9k/sequence/8k9k_raw.pdb | sabdab_dataset/8k9k/sequence/8k9k_H_VH.fa | sabdab_dataset/8k9k/sequence/8k9k_H_VL.fa | sabdab_dataset/8k9k/structure/8k9k.pdb | sabdab_dataset/8k9k/structure/chothia/8k9k.pdb | false | false | train |
8k9l | H | h | 0 | A | B | G | protein | protein | protein | NA | NA | NA | g protein subunit alpha i3 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | SIGNALING PROTEIN | 05/29/24 | Full agonist- and positive allosteric modulator-bound mu-type opioid receptor-G protein complex | Escherichia coli; Homo sapiens; Macaca mulatta; synthetic construct; SYNTHETIC CONSTRUCT | synthetic construct | null | macaca mulatta | homo sapiens | homo sapiens | Hisano, T., Uchikubo-Kamo, T., Shirouzu, M., Imai, S., Kaneko, S., Shimada, I. | 3.05 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8k9l/abangle/8k9l.abangle | sabdab_dataset/8k9l/annotation/8k9l_H_VH.ann | sabdab_dataset/8k9l/annotation/8k9l_H_VL.ann | sabdab_dataset/8k9l/imgt/8k9l_H_H.ann | sabdab_dataset/8k9l/imgt/8k9l_H_L.ann | sabdab_dataset/8k9l/sequence/8k9l_raw.pdb | sabdab_dataset/8k9l/sequence/8k9l_H_VH.fa | sabdab_dataset/8k9l/sequence/8k9l_H_VL.fa | sabdab_dataset/8k9l/structure/8k9l.pdb | sabdab_dataset/8k9l/structure/chothia/8k9l.pdb | false | false | train |
8k9m | A | B | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/31/24 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-3 | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 6.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8k9m/abangle/8k9m.abangle | sabdab_dataset/8k9m/annotation/8k9m_A_VH.ann | sabdab_dataset/8k9m/annotation/8k9m_B_VL.ann | sabdab_dataset/8k9m/imgt/8k9m_A_H.ann | sabdab_dataset/8k9m/imgt/8k9m_B_L.ann | sabdab_dataset/8k9m/sequence/8k9m_raw.pdb | sabdab_dataset/8k9m/sequence/8k9m_A_VH.fa | sabdab_dataset/8k9m/sequence/8k9m_B_VL.fa | sabdab_dataset/8k9m/structure/8k9m.pdb | sabdab_dataset/8k9m/structure/chothia/8k9m.pdb | false | false | test |
8k9m | G | F | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/31/24 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-3 | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Hong, Q., Cong, Y. | 6.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8k9m/abangle/8k9m.abangle | sabdab_dataset/8k9m/annotation/8k9m_G_VH.ann | sabdab_dataset/8k9m/annotation/8k9m_F_VL.ann | sabdab_dataset/8k9m/imgt/8k9m_G_H.ann | sabdab_dataset/8k9m/imgt/8k9m_F_L.ann | sabdab_dataset/8k9m/sequence/8k9m_raw.pdb | sabdab_dataset/8k9m/sequence/8k9m_G_VH.fa | sabdab_dataset/8k9m/sequence/8k9m_F_VL.fa | sabdab_dataset/8k9m/structure/8k9m.pdb | sabdab_dataset/8k9m/structure/chothia/8k9m.pdb | false | false | train |
8kad | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 12/27/23 | Crystal structure of an antibody light chain tetramer with 3D domain swapping | Homo sapiens | null | homo sapiens | null | Sakai, T., Mashima, T., Kobayashi, N., Ogata, H., Uda, T., Hifumi, E., Hirota, S. | 2 | X-RAY DIFFRACTION | 0.296 | 0.253 | false | true | null | IGKV2 | Kappa | null | null | null | null | null | null | null | sabdab_dataset/8kad/annotation/8kad_A_VL.ann | null | sabdab_dataset/8kad/imgt/8kad_A_L.ann | sabdab_dataset/8kad/sequence/8kad_raw.pdb | null | sabdab_dataset/8kad/sequence/8kad_A_VL.fa | sabdab_dataset/8kad/structure/8kad.pdb | sabdab_dataset/8kad/structure/chothia/8kad.pdb | true | false | train |
8kad | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/27/23 | Crystal structure of an antibody light chain tetramer with 3D domain swapping | Homo sapiens | null | homo sapiens | null | Sakai, T., Mashima, T., Kobayashi, N., Ogata, H., Uda, T., Hifumi, E., Hirota, S. | 2 | X-RAY DIFFRACTION | 0.296 | 0.253 | false | true | null | IGKV2 | Kappa | null | null | null | null | null | null | null | sabdab_dataset/8kad/annotation/8kad_B_VL.ann | null | sabdab_dataset/8kad/imgt/8kad_B_L.ann | sabdab_dataset/8kad/sequence/8kad_raw.pdb | null | sabdab_dataset/8kad/sequence/8kad_B_VL.fa | sabdab_dataset/8kad/structure/8kad.pdb | sabdab_dataset/8kad/structure/chothia/8kad.pdb | true | false | train |
8kae | H | L | 0 | R | protein | null | sphingosine-1-phosphate transporter spns2 | MEMBRANE PROTEIN | 01/03/24 | 16d-bound human SPNS2 | Homo sapiens; Lama glama; synthetic construct | synthetic construct | synthetic construct | homo sapiens | He, Y., Duan, Y. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kae/abangle/8kae.abangle | sabdab_dataset/8kae/annotation/8kae_H_VH.ann | sabdab_dataset/8kae/annotation/8kae_L_VL.ann | sabdab_dataset/8kae/imgt/8kae_H_H.ann | sabdab_dataset/8kae/imgt/8kae_L_L.ann | sabdab_dataset/8kae/sequence/8kae_raw.pdb | sabdab_dataset/8kae/sequence/8kae_H_VH.fa | sabdab_dataset/8kae/sequence/8kae_L_VL.fa | sabdab_dataset/8kae/structure/8kae.pdb | sabdab_dataset/8kae/structure/chothia/8kae.pdb | false | false | train |
8kae | K | null | 0 | null | null | null | null | MEMBRANE PROTEIN | 01/03/24 | 16d-bound human SPNS2 | Homo sapiens; Lama glama; synthetic construct | lama glama | null | null | He, Y., Duan, Y. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | sabdab_dataset/8kae/abangle/8kae.abangle | sabdab_dataset/8kae/annotation/8kae_K_VH.ann | null | sabdab_dataset/8kae/imgt/8kae_K_H.ann | null | sabdab_dataset/8kae/sequence/8kae_raw.pdb | sabdab_dataset/8kae/sequence/8kae_K_VH.fa | null | sabdab_dataset/8kae/structure/8kae.pdb | sabdab_dataset/8kae/structure/chothia/8kae.pdb | false | false | train |
8kae | N | null | 0 | R | protein | null | sphingosine-1-phosphate transporter spns2 | MEMBRANE PROTEIN | 01/03/24 | 16d-bound human SPNS2 | Homo sapiens; Lama glama; synthetic construct | lama glama | null | homo sapiens | He, Y., Duan, Y. | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | sabdab_dataset/8kae/abangle/8kae.abangle | sabdab_dataset/8kae/annotation/8kae_N_VH.ann | null | sabdab_dataset/8kae/imgt/8kae_N_H.ann | null | sabdab_dataset/8kae/sequence/8kae_raw.pdb | sabdab_dataset/8kae/sequence/8kae_N_VH.fa | null | sabdab_dataset/8kae/structure/8kae.pdb | sabdab_dataset/8kae/structure/chothia/8kae.pdb | false | false | train |
8kdd | H | L | 0 | A | protein | null | 4f2 cell-surface antigen heavy chain | TRANSPORT PROTEIN | 02/12/25 | Structure of LAT1-CD98hc-Fab170 in complex with JPH203, consensus map | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Lee, Y. | 3.83 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/8kdd/abangle/8kdd.abangle | sabdab_dataset/8kdd/annotation/8kdd_H_VH.ann | sabdab_dataset/8kdd/annotation/8kdd_L_VL.ann | sabdab_dataset/8kdd/imgt/8kdd_H_H.ann | sabdab_dataset/8kdd/imgt/8kdd_L_L.ann | sabdab_dataset/8kdd/sequence/8kdd_raw.pdb | sabdab_dataset/8kdd/sequence/8kdd_H_VH.fa | sabdab_dataset/8kdd/sequence/8kdd_L_VL.fa | sabdab_dataset/8kdd/structure/8kdd.pdb | sabdab_dataset/8kdd/structure/chothia/8kdd.pdb | false | false | train |
8kdg | H | L | 0 | A | protein | null | 4f2 cell-surface antigen heavy chain | TRANSPORT PROTEIN | 02/12/25 | Structure of LAT1-CD98hc-Fab170 in complex with BCH, consensus map | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Lee, Y. | 3.68 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/8kdg/abangle/8kdg.abangle | sabdab_dataset/8kdg/annotation/8kdg_H_VH.ann | sabdab_dataset/8kdg/annotation/8kdg_L_VL.ann | sabdab_dataset/8kdg/imgt/8kdg_H_H.ann | sabdab_dataset/8kdg/imgt/8kdg_L_L.ann | sabdab_dataset/8kdg/sequence/8kdg_raw.pdb | sabdab_dataset/8kdg/sequence/8kdg_H_VH.fa | sabdab_dataset/8kdg/sequence/8kdg_L_VL.fa | sabdab_dataset/8kdg/structure/8kdg.pdb | sabdab_dataset/8kdg/structure/chothia/8kdg.pdb | false | false | train |
8kdi | H | L | 0 | A | protein | null | 4f2 cell-surface antigen heavy chain | TRANSPORT PROTEIN/IMMUNE SYSTEM | 02/12/25 | Structure of apo inward-open LAT1-CD98hc-Fab170 in nanodisc, consensus map | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Lee, Y. | 3.58 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/8kdi/abangle/8kdi.abangle | sabdab_dataset/8kdi/annotation/8kdi_H_VH.ann | sabdab_dataset/8kdi/annotation/8kdi_L_VL.ann | sabdab_dataset/8kdi/imgt/8kdi_H_H.ann | sabdab_dataset/8kdi/imgt/8kdi_L_L.ann | sabdab_dataset/8kdi/sequence/8kdi_raw.pdb | sabdab_dataset/8kdi/sequence/8kdi_H_VH.fa | sabdab_dataset/8kdi/sequence/8kdi_L_VL.fa | sabdab_dataset/8kdi/structure/8kdi.pdb | sabdab_dataset/8kdi/structure/chothia/8kdi.pdb | false | false | train |
8kdm | E | D | 0 | B | C | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | Structure of SARS-CoV Spike protein complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.87 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8kdm/abangle/8kdm.abangle | sabdab_dataset/8kdm/annotation/8kdm_E_VH.ann | sabdab_dataset/8kdm/annotation/8kdm_D_VL.ann | sabdab_dataset/8kdm/imgt/8kdm_E_H.ann | sabdab_dataset/8kdm/imgt/8kdm_D_L.ann | sabdab_dataset/8kdm/sequence/8kdm_raw.pdb | sabdab_dataset/8kdm/sequence/8kdm_E_VH.fa | sabdab_dataset/8kdm/sequence/8kdm_D_VL.fa | sabdab_dataset/8kdm/structure/8kdm.pdb | sabdab_dataset/8kdm/structure/chothia/8kdm.pdb | false | false | train |
8kdm | G | F | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | Structure of SARS-CoV Spike protein complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.87 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8kdm/abangle/8kdm.abangle | sabdab_dataset/8kdm/annotation/8kdm_G_VH.ann | sabdab_dataset/8kdm/annotation/8kdm_F_VL.ann | sabdab_dataset/8kdm/imgt/8kdm_G_H.ann | sabdab_dataset/8kdm/imgt/8kdm_F_L.ann | sabdab_dataset/8kdm/sequence/8kdm_raw.pdb | sabdab_dataset/8kdm/sequence/8kdm_G_VH.fa | sabdab_dataset/8kdm/sequence/8kdm_F_VL.fa | sabdab_dataset/8kdm/structure/8kdm.pdb | sabdab_dataset/8kdm/structure/chothia/8kdm.pdb | false | false | test |
8kdr | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kdr/abangle/8kdr.abangle | sabdab_dataset/8kdr/annotation/8kdr_H_VH.ann | sabdab_dataset/8kdr/annotation/8kdr_L_VL.ann | sabdab_dataset/8kdr/imgt/8kdr_H_H.ann | sabdab_dataset/8kdr/imgt/8kdr_L_L.ann | sabdab_dataset/8kdr/sequence/8kdr_raw.pdb | sabdab_dataset/8kdr/sequence/8kdr_H_VH.fa | sabdab_dataset/8kdr/sequence/8kdr_L_VL.fa | sabdab_dataset/8kdr/structure/8kdr.pdb | sabdab_dataset/8kdr/structure/chothia/8kdr.pdb | false | false | train |
8kds | E | D | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.05 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kds/abangle/8kds.abangle | sabdab_dataset/8kds/annotation/8kds_E_VH.ann | sabdab_dataset/8kds/annotation/8kds_D_VL.ann | sabdab_dataset/8kds/imgt/8kds_E_H.ann | sabdab_dataset/8kds/imgt/8kds_D_L.ann | sabdab_dataset/8kds/sequence/8kds_raw.pdb | sabdab_dataset/8kds/sequence/8kds_E_VH.fa | sabdab_dataset/8kds/sequence/8kds_D_VL.fa | sabdab_dataset/8kds/structure/8kds.pdb | sabdab_dataset/8kds/structure/chothia/8kds.pdb | false | false | train |
8kds | G | F | 0 | C | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.05 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kds/abangle/8kds.abangle | sabdab_dataset/8kds/annotation/8kds_G_VH.ann | sabdab_dataset/8kds/annotation/8kds_F_VL.ann | sabdab_dataset/8kds/imgt/8kds_G_H.ann | sabdab_dataset/8kds/imgt/8kds_F_L.ann | sabdab_dataset/8kds/sequence/8kds_raw.pdb | sabdab_dataset/8kds/sequence/8kds_G_VH.fa | sabdab_dataset/8kds/sequence/8kds_F_VL.fa | sabdab_dataset/8kds/structure/8kds.pdb | sabdab_dataset/8kds/structure/chothia/8kds.pdb | false | false | validation |
8kds | I | H | 0 | B | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.05 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kds/abangle/8kds.abangle | sabdab_dataset/8kds/annotation/8kds_I_VH.ann | sabdab_dataset/8kds/annotation/8kds_H_VL.ann | sabdab_dataset/8kds/imgt/8kds_I_H.ann | sabdab_dataset/8kds/imgt/8kds_H_L.ann | sabdab_dataset/8kds/sequence/8kds_raw.pdb | sabdab_dataset/8kds/sequence/8kds_I_VH.fa | sabdab_dataset/8kds/sequence/8kds_H_VL.fa | sabdab_dataset/8kds/structure/8kds.pdb | sabdab_dataset/8kds/structure/chothia/8kds.pdb | false | false | train |
8kdt | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8kdt/abangle/8kdt.abangle | sabdab_dataset/8kdt/annotation/8kdt_H_VH.ann | sabdab_dataset/8kdt/annotation/8kdt_L_VL.ann | sabdab_dataset/8kdt/imgt/8kdt_H_H.ann | sabdab_dataset/8kdt/imgt/8kdt_L_L.ann | sabdab_dataset/8kdt/sequence/8kdt_raw.pdb | sabdab_dataset/8kdt/sequence/8kdt_H_VH.fa | sabdab_dataset/8kdt/sequence/8kdt_L_VL.fa | sabdab_dataset/8kdt/structure/8kdt.pdb | sabdab_dataset/8kdt/structure/chothia/8kdt.pdb | false | false | train |
8keh | E | D | 0 | A | C | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/04/24 | State 2 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keh/abangle/8keh.abangle | sabdab_dataset/8keh/annotation/8keh_E_VH.ann | sabdab_dataset/8keh/annotation/8keh_D_VL.ann | sabdab_dataset/8keh/imgt/8keh_E_H.ann | sabdab_dataset/8keh/imgt/8keh_D_L.ann | sabdab_dataset/8keh/sequence/8keh_raw.pdb | sabdab_dataset/8keh/sequence/8keh_E_VH.fa | sabdab_dataset/8keh/sequence/8keh_D_VL.fa | sabdab_dataset/8keh/structure/8keh.pdb | sabdab_dataset/8keh/structure/chothia/8keh.pdb | false | false | train |
8keh | G | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/04/24 | State 2 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keh/abangle/8keh.abangle | sabdab_dataset/8keh/annotation/8keh_G_VH.ann | sabdab_dataset/8keh/annotation/8keh_F_VL.ann | sabdab_dataset/8keh/imgt/8keh_G_H.ann | sabdab_dataset/8keh/imgt/8keh_F_L.ann | sabdab_dataset/8keh/sequence/8keh_raw.pdb | sabdab_dataset/8keh/sequence/8keh_G_VH.fa | sabdab_dataset/8keh/sequence/8keh_F_VL.fa | sabdab_dataset/8keh/structure/8keh.pdb | sabdab_dataset/8keh/structure/chothia/8keh.pdb | false | false | train |
8kei | C | E | 0 | B | protein | null | cytochrome b-245 heavy chain | IMMUNE SYSTEM | 05/22/24 | Cryo-EM structure of NADPH oxidase 2 in complex with p22phox and EROS | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Liang, S.Y., Liu, A.J., Liu, Y.Z., Ye, R.D. | 3.56 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kei/abangle/8kei.abangle | sabdab_dataset/8kei/annotation/8kei_C_VH.ann | sabdab_dataset/8kei/annotation/8kei_E_VL.ann | sabdab_dataset/8kei/imgt/8kei_C_H.ann | sabdab_dataset/8kei/imgt/8kei_E_L.ann | sabdab_dataset/8kei/sequence/8kei_raw.pdb | sabdab_dataset/8kei/sequence/8kei_C_VH.fa | sabdab_dataset/8kei/sequence/8kei_E_VL.fa | sabdab_dataset/8kei/structure/8kei.pdb | sabdab_dataset/8kei/structure/chothia/8kei.pdb | false | false | train |
8kej | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.73 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8kej/abangle/8kej.abangle | sabdab_dataset/8kej/annotation/8kej_H_VH.ann | sabdab_dataset/8kej/annotation/8kej_L_VL.ann | sabdab_dataset/8kej/imgt/8kej_H_H.ann | sabdab_dataset/8kej/imgt/8kej_L_L.ann | sabdab_dataset/8kej/sequence/8kej_raw.pdb | sabdab_dataset/8kej/sequence/8kej_H_VH.fa | sabdab_dataset/8kej/sequence/8kej_L_VL.fa | sabdab_dataset/8kej/structure/8kej.pdb | sabdab_dataset/8kej/structure/chothia/8kej.pdb | false | false | train |
8kek | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kek/abangle/8kek.abangle | sabdab_dataset/8kek/annotation/8kek_H_VH.ann | sabdab_dataset/8kek/annotation/8kek_L_VL.ann | sabdab_dataset/8kek/imgt/8kek_H_H.ann | sabdab_dataset/8kek/imgt/8kek_L_L.ann | sabdab_dataset/8kek/sequence/8kek_raw.pdb | sabdab_dataset/8kek/sequence/8kek_H_VH.fa | sabdab_dataset/8kek/sequence/8kek_L_VL.fa | sabdab_dataset/8kek/structure/8kek.pdb | sabdab_dataset/8kek/structure/chothia/8kek.pdb | false | false | train |
8keo | E | D | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.78 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keo/abangle/8keo.abangle | sabdab_dataset/8keo/annotation/8keo_E_VH.ann | sabdab_dataset/8keo/annotation/8keo_D_VL.ann | sabdab_dataset/8keo/imgt/8keo_E_H.ann | sabdab_dataset/8keo/imgt/8keo_D_L.ann | sabdab_dataset/8keo/sequence/8keo_raw.pdb | sabdab_dataset/8keo/sequence/8keo_E_VH.fa | sabdab_dataset/8keo/sequence/8keo_D_VL.fa | sabdab_dataset/8keo/structure/8keo.pdb | sabdab_dataset/8keo/structure/chothia/8keo.pdb | false | false | validation |
8keo | G | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.78 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keo/abangle/8keo.abangle | sabdab_dataset/8keo/annotation/8keo_G_VH.ann | sabdab_dataset/8keo/annotation/8keo_F_VL.ann | sabdab_dataset/8keo/imgt/8keo_G_H.ann | sabdab_dataset/8keo/imgt/8keo_F_L.ann | sabdab_dataset/8keo/sequence/8keo_raw.pdb | sabdab_dataset/8keo/sequence/8keo_G_VH.fa | sabdab_dataset/8keo/sequence/8keo_F_VL.fa | sabdab_dataset/8keo/structure/8keo.pdb | sabdab_dataset/8keo/structure/chothia/8keo.pdb | false | false | train |
8keo | I | H | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.78 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keo/abangle/8keo.abangle | sabdab_dataset/8keo/annotation/8keo_I_VH.ann | sabdab_dataset/8keo/annotation/8keo_H_VL.ann | sabdab_dataset/8keo/imgt/8keo_I_H.ann | sabdab_dataset/8keo/imgt/8keo_H_L.ann | sabdab_dataset/8keo/sequence/8keo_raw.pdb | sabdab_dataset/8keo/sequence/8keo_I_VH.fa | sabdab_dataset/8keo/sequence/8keo_H_VL.fa | sabdab_dataset/8keo/structure/8keo.pdb | sabdab_dataset/8keo/structure/chothia/8keo.pdb | false | false | train |
8kep | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.93 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8kep/abangle/8kep.abangle | sabdab_dataset/8kep/annotation/8kep_H_VH.ann | sabdab_dataset/8kep/annotation/8kep_L_VL.ann | sabdab_dataset/8kep/imgt/8kep_H_H.ann | sabdab_dataset/8kep/imgt/8kep_L_L.ann | sabdab_dataset/8kep/sequence/8kep_raw.pdb | sabdab_dataset/8kep/sequence/8kep_H_VH.fa | sabdab_dataset/8kep/sequence/8kep_L_VL.fa | sabdab_dataset/8kep/structure/8kep.pdb | sabdab_dataset/8kep/structure/chothia/8kep.pdb | false | false | train |
8keq | E | D | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.14 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keq/abangle/8keq.abangle | sabdab_dataset/8keq/annotation/8keq_E_VH.ann | sabdab_dataset/8keq/annotation/8keq_D_VL.ann | sabdab_dataset/8keq/imgt/8keq_E_H.ann | sabdab_dataset/8keq/imgt/8keq_D_L.ann | sabdab_dataset/8keq/sequence/8keq_raw.pdb | sabdab_dataset/8keq/sequence/8keq_E_VH.fa | sabdab_dataset/8keq/sequence/8keq_D_VL.fa | sabdab_dataset/8keq/structure/8keq.pdb | sabdab_dataset/8keq/structure/chothia/8keq.pdb | false | false | train |
8keq | G | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/14/24 | State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 3.14 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8keq/abangle/8keq.abangle | sabdab_dataset/8keq/annotation/8keq_G_VH.ann | sabdab_dataset/8keq/annotation/8keq_F_VL.ann | sabdab_dataset/8keq/imgt/8keq_G_H.ann | sabdab_dataset/8keq/imgt/8keq_F_L.ann | sabdab_dataset/8keq/sequence/8keq_raw.pdb | sabdab_dataset/8keq/sequence/8keq_G_VH.fa | sabdab_dataset/8keq/sequence/8keq_F_VL.fa | sabdab_dataset/8keq/structure/8keq.pdb | sabdab_dataset/8keq/structure/chothia/8keq.pdb | false | false | train |
8ker | E | D | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.95 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ker/abangle/8ker.abangle | sabdab_dataset/8ker/annotation/8ker_E_VH.ann | sabdab_dataset/8ker/annotation/8ker_D_VL.ann | sabdab_dataset/8ker/imgt/8ker_E_H.ann | sabdab_dataset/8ker/imgt/8ker_D_L.ann | sabdab_dataset/8ker/sequence/8ker_raw.pdb | sabdab_dataset/8ker/sequence/8ker_E_VH.fa | sabdab_dataset/8ker/sequence/8ker_D_VL.fa | sabdab_dataset/8ker/structure/8ker.pdb | sabdab_dataset/8ker/structure/chothia/8ker.pdb | false | false | train |
8ker | G | F | 0 | B | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.95 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ker/abangle/8ker.abangle | sabdab_dataset/8ker/annotation/8ker_G_VH.ann | sabdab_dataset/8ker/annotation/8ker_F_VL.ann | sabdab_dataset/8ker/imgt/8ker_G_H.ann | sabdab_dataset/8ker/imgt/8ker_F_L.ann | sabdab_dataset/8ker/sequence/8ker_raw.pdb | sabdab_dataset/8ker/sequence/8ker_G_VH.fa | sabdab_dataset/8ker/sequence/8ker_F_VL.fa | sabdab_dataset/8ker/structure/8ker.pdb | sabdab_dataset/8ker/structure/chothia/8ker.pdb | false | false | train |
8ker | I | H | 0 | C | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/14/24 | Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, L., Mao, Q., Wang, Y. | 2.95 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ker/abangle/8ker.abangle | sabdab_dataset/8ker/annotation/8ker_I_VH.ann | sabdab_dataset/8ker/annotation/8ker_H_VL.ann | sabdab_dataset/8ker/imgt/8ker_I_H.ann | sabdab_dataset/8ker/imgt/8ker_H_L.ann | sabdab_dataset/8ker/sequence/8ker_raw.pdb | sabdab_dataset/8ker/sequence/8ker_I_VH.fa | sabdab_dataset/8ker/sequence/8ker_H_VL.fa | sabdab_dataset/8ker/structure/8ker.pdb | sabdab_dataset/8ker/structure/chothia/8ker.pdb | false | false | train |
8kfa | D | F | 0 | B | protein | null | envelope glycoprotein b | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Cryo-EM structure of HSV-1 gB with D48 Fab complex | Homo sapiens; Human herpesvirus 1 (strain KOS) | homo sapiens | homo sapiens | human herpesvirus 1 (strain kos) | Yang, J., Sun, C., Fang, X., Zeng, M., Liu, Z. | 3.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kfa/abangle/8kfa.abangle | sabdab_dataset/8kfa/annotation/8kfa_D_VH.ann | sabdab_dataset/8kfa/annotation/8kfa_F_VL.ann | sabdab_dataset/8kfa/imgt/8kfa_D_H.ann | sabdab_dataset/8kfa/imgt/8kfa_F_L.ann | sabdab_dataset/8kfa/sequence/8kfa_raw.pdb | sabdab_dataset/8kfa/sequence/8kfa_D_VH.fa | sabdab_dataset/8kfa/sequence/8kfa_F_VL.fa | sabdab_dataset/8kfa/structure/8kfa.pdb | sabdab_dataset/8kfa/structure/chothia/8kfa.pdb | false | false | train |
8kfa | E | G | 0 | C | protein | null | envelope glycoprotein b | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Cryo-EM structure of HSV-1 gB with D48 Fab complex | Homo sapiens; Human herpesvirus 1 (strain KOS) | homo sapiens | homo sapiens | human herpesvirus 1 (strain kos) | Yang, J., Sun, C., Fang, X., Zeng, M., Liu, Z. | 3.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kfa/abangle/8kfa.abangle | sabdab_dataset/8kfa/annotation/8kfa_E_VH.ann | sabdab_dataset/8kfa/annotation/8kfa_G_VL.ann | sabdab_dataset/8kfa/imgt/8kfa_E_H.ann | sabdab_dataset/8kfa/imgt/8kfa_G_L.ann | sabdab_dataset/8kfa/sequence/8kfa_raw.pdb | sabdab_dataset/8kfa/sequence/8kfa_E_VH.fa | sabdab_dataset/8kfa/sequence/8kfa_G_VL.fa | sabdab_dataset/8kfa/structure/8kfa.pdb | sabdab_dataset/8kfa/structure/chothia/8kfa.pdb | false | false | train |
8kfa | H | L | 0 | A | protein | null | envelope glycoprotein b | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Cryo-EM structure of HSV-1 gB with D48 Fab complex | Homo sapiens; Human herpesvirus 1 (strain KOS) | homo sapiens | homo sapiens | human herpesvirus 1 (strain kos) | Yang, J., Sun, C., Fang, X., Zeng, M., Liu, Z. | 3.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kfa/abangle/8kfa.abangle | sabdab_dataset/8kfa/annotation/8kfa_H_VH.ann | sabdab_dataset/8kfa/annotation/8kfa_L_VL.ann | sabdab_dataset/8kfa/imgt/8kfa_H_H.ann | sabdab_dataset/8kfa/imgt/8kfa_L_L.ann | sabdab_dataset/8kfa/sequence/8kfa_raw.pdb | sabdab_dataset/8kfa/sequence/8kfa_H_VH.fa | sabdab_dataset/8kfa/sequence/8kfa_L_VL.fa | sabdab_dataset/8kfa/structure/8kfa.pdb | sabdab_dataset/8kfa/structure/chothia/8kfa.pdb | false | false | train |
8kfx | S | s | 0 | A | B | C | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | SIGNALING PROTEIN | 02/07/24 | Gi bound CCR8 complex with nonpeptide agonist LMD-009 | Homo sapiens; synthetic construct | homo sapiens | null | homo sapiens | homo sapiens | homo sapiens | Jiang, S., Lin, X., Wu, L.J., Xu, F. | 2.96 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kfx/abangle/8kfx.abangle | sabdab_dataset/8kfx/annotation/8kfx_S_VH.ann | sabdab_dataset/8kfx/annotation/8kfx_S_VL.ann | sabdab_dataset/8kfx/imgt/8kfx_S_H.ann | sabdab_dataset/8kfx/imgt/8kfx_S_L.ann | sabdab_dataset/8kfx/sequence/8kfx_raw.pdb | sabdab_dataset/8kfx/sequence/8kfx_S_VH.fa | sabdab_dataset/8kfx/sequence/8kfx_S_VL.fa | sabdab_dataset/8kfx/structure/8kfx.pdb | sabdab_dataset/8kfx/structure/chothia/8kfx.pdb | false | false | train |
8kfy | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 02/07/24 | Gi bound CCR8 complex with nonpeptide agonist ZK 756326 | Homo sapiens; synthetic construct | homo sapiens | null | homo sapiens | homo sapiens | Jiang, S., Lin, X., Wu, L.J., Xu, F. | 3.06 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kfy/abangle/8kfy.abangle | sabdab_dataset/8kfy/annotation/8kfy_S_VH.ann | sabdab_dataset/8kfy/annotation/8kfy_S_VL.ann | sabdab_dataset/8kfy/imgt/8kfy_S_H.ann | sabdab_dataset/8kfy/imgt/8kfy_S_L.ann | sabdab_dataset/8kfy/sequence/8kfy_raw.pdb | sabdab_dataset/8kfy/sequence/8kfy_S_VH.fa | sabdab_dataset/8kfy/sequence/8kfy_S_VL.fa | sabdab_dataset/8kfy/structure/8kfy.pdb | sabdab_dataset/8kfy/structure/chothia/8kfy.pdb | false | false | train |
8kfz | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 02/07/24 | Gi bound CCR8 in ligand free state | Homo sapiens; synthetic construct | homo sapiens | null | homo sapiens | homo sapiens | Jiang, S., Lin, X., Wu, L.J., Xu, F. | 3.3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kfz/abangle/8kfz.abangle | sabdab_dataset/8kfz/annotation/8kfz_S_VH.ann | sabdab_dataset/8kfz/annotation/8kfz_S_VL.ann | sabdab_dataset/8kfz/imgt/8kfz_S_H.ann | sabdab_dataset/8kfz/imgt/8kfz_S_L.ann | sabdab_dataset/8kfz/sequence/8kfz_raw.pdb | sabdab_dataset/8kfz/sequence/8kfz_S_VH.fa | sabdab_dataset/8kfz/sequence/8kfz_S_VL.fa | sabdab_dataset/8kfz/structure/8kfz.pdb | sabdab_dataset/8kfz/structure/chothia/8kfz.pdb | false | false | train |
8kg5 | D | E | 0 | C | B | protein | protein | NA | NA | fusion glycoprotein f0,fibritin | fusion glycoprotein f0,fibritin | VIRAL PROTEIN/IMMUNE SYSTEM | 06/19/24 | Prefusion RSV F Bound to Lonafarnib and D25 Fab | Enterobacteria phage T4; Homo sapiens; Human respiratory syncytial virus A (strain A2) | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Yang, Q., Xue, B., Liu, F., Peng, W., Chen, X. | 3.17 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8kg5/abangle/8kg5.abangle | sabdab_dataset/8kg5/annotation/8kg5_D_VH.ann | sabdab_dataset/8kg5/annotation/8kg5_E_VL.ann | sabdab_dataset/8kg5/imgt/8kg5_D_H.ann | sabdab_dataset/8kg5/imgt/8kg5_E_L.ann | sabdab_dataset/8kg5/sequence/8kg5_raw.pdb | sabdab_dataset/8kg5/sequence/8kg5_D_VH.fa | sabdab_dataset/8kg5/sequence/8kg5_E_VL.fa | sabdab_dataset/8kg5/structure/8kg5.pdb | sabdab_dataset/8kg5/structure/chothia/8kg5.pdb | false | false | train |
8kgg | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-2,guanine nucleotide-binding protein subunit alpha-13 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/31/24 | LPS-bound P2Y10 in complex with G13 | Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | He, Y., Yin, Y. | 3.06 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kgg/abangle/8kgg.abangle | sabdab_dataset/8kgg/annotation/8kgg_E_VH.ann | sabdab_dataset/8kgg/annotation/8kgg_E_VL.ann | sabdab_dataset/8kgg/imgt/8kgg_E_H.ann | sabdab_dataset/8kgg/imgt/8kgg_E_L.ann | sabdab_dataset/8kgg/sequence/8kgg_raw.pdb | sabdab_dataset/8kgg/sequence/8kgg_E_VH.fa | sabdab_dataset/8kgg/sequence/8kgg_E_VL.fa | sabdab_dataset/8kgg/structure/8kgg.pdb | sabdab_dataset/8kgg/structure/chothia/8kgg.pdb | false | false | train |
8kgk | E | null | 0 | B | C | protein | protein | NA | NA | guanine nucleotide-binding protein g(olf) subunit alpha,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/11/23 | Cryo-EM structure of the GPR61-Gs complex | Homo sapiens; Lama glama | lama glama | null | homo sapiens | homo sapiens | Nie, Y., Qiu, Z., Zheng, S. | 3.16 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8kgk/annotation/8kgk_E_VH.ann | null | sabdab_dataset/8kgk/imgt/8kgk_E_H.ann | null | sabdab_dataset/8kgk/sequence/8kgk_raw.pdb | sabdab_dataset/8kgk/sequence/8kgk_E_VH.fa | null | sabdab_dataset/8kgk/structure/8kgk.pdb | sabdab_dataset/8kgk/structure/chothia/8kgk.pdb | false | false | train |
8kgz | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 11/08/23 | Crystal structure of single-chain Fv antibody against antigen peptide from SARS-CoV2 S-spike protein | Escherichia coli (strain K12); Ovis aries | escherichia coli (strain k12), ovis aries | null | null | Ma, Q.Q., Zhang, B.L., Cheng, X.Y., Huang, Y.Q., Su, Z.D. | 2.21 | X-RAY DIFFRACTION | 0.321 | 0.269 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kgz/abangle/8kgz.abangle | sabdab_dataset/8kgz/annotation/8kgz_A_VH.ann | sabdab_dataset/8kgz/annotation/8kgz_A_VL.ann | sabdab_dataset/8kgz/imgt/8kgz_A_H.ann | sabdab_dataset/8kgz/imgt/8kgz_A_L.ann | sabdab_dataset/8kgz/sequence/8kgz_raw.pdb | sabdab_dataset/8kgz/sequence/8kgz_A_VH.fa | sabdab_dataset/8kgz/sequence/8kgz_A_VL.fa | sabdab_dataset/8kgz/structure/8kgz.pdb | sabdab_dataset/8kgz/structure/chothia/8kgz.pdb | true | false | validation |
8kgz | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 11/08/23 | Crystal structure of single-chain Fv antibody against antigen peptide from SARS-CoV2 S-spike protein | Escherichia coli (strain K12); Ovis aries | escherichia coli (strain k12), ovis aries | null | null | Ma, Q.Q., Zhang, B.L., Cheng, X.Y., Huang, Y.Q., Su, Z.D. | 2.21 | X-RAY DIFFRACTION | 0.321 | 0.269 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8kgz/abangle/8kgz.abangle | sabdab_dataset/8kgz/annotation/8kgz_B_VH.ann | sabdab_dataset/8kgz/annotation/8kgz_B_VL.ann | sabdab_dataset/8kgz/imgt/8kgz_B_H.ann | sabdab_dataset/8kgz/imgt/8kgz_B_L.ann | sabdab_dataset/8kgz/sequence/8kgz_raw.pdb | sabdab_dataset/8kgz/sequence/8kgz_B_VH.fa | sabdab_dataset/8kgz/sequence/8kgz_B_VL.fa | sabdab_dataset/8kgz/structure/8kgz.pdb | sabdab_dataset/8kgz/structure/chothia/8kgz.pdb | true | false | test |
8kh4 | E | null | 0 | B | C | protein | protein | NA | NA | guanine nucleotide-binding protein g(olf) subunit alpha,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/11/23 | Cryo-EM structure of the GPR161-Gs complex | Homo sapiens; Lama glama | lama glama | null | homo sapiens | homo sapiens | Nie, Y., Qiu, Z., Zheng, S., Chen, S. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8kh4/annotation/8kh4_E_VH.ann | null | sabdab_dataset/8kh4/imgt/8kh4_E_H.ann | null | sabdab_dataset/8kh4/sequence/8kh4_raw.pdb | sabdab_dataset/8kh4/sequence/8kh4_E_VH.fa | null | sabdab_dataset/8kh4/structure/8kh4.pdb | sabdab_dataset/8kh4/structure/chothia/8kh4.pdb | false | false | train |
8kh5 | E | null | 0 | B | C | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/18/23 | Cryo-EM structure of the GPR174-Gs complex bound to endogenous lysoPS | Homo sapiens; Lama glama | lama glama | null | homo sapiens | homo sapiens | Nie, Y., Qiu, Z., Zheng, S., Chen, S. | 2.83 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8kh5/annotation/8kh5_E_VH.ann | null | sabdab_dataset/8kh5/imgt/8kh5_E_H.ann | null | sabdab_dataset/8kh5/sequence/8kh5_raw.pdb | sabdab_dataset/8kh5/sequence/8kh5_E_VH.fa | null | sabdab_dataset/8kh5/structure/8kh5.pdb | sabdab_dataset/8kh5/structure/chothia/8kh5.pdb | false | false | train |
8khc | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 04/17/24 | SARS-CoV-2 Omicron spike in complex with 5817 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cao, L., Wang, X. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8khc/abangle/8khc.abangle | sabdab_dataset/8khc/annotation/8khc_F_VH.ann | sabdab_dataset/8khc/annotation/8khc_G_VL.ann | sabdab_dataset/8khc/imgt/8khc_F_H.ann | sabdab_dataset/8khc/imgt/8khc_G_L.ann | sabdab_dataset/8khc/sequence/8khc_raw.pdb | sabdab_dataset/8khc/sequence/8khc_F_VH.fa | sabdab_dataset/8khc/sequence/8khc_G_VL.fa | sabdab_dataset/8khc/structure/8khc.pdb | sabdab_dataset/8khc/structure/chothia/8khc.pdb | false | false | train |
8khc | H | J | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 04/17/24 | SARS-CoV-2 Omicron spike in complex with 5817 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cao, L., Wang, X. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8khc/abangle/8khc.abangle | sabdab_dataset/8khc/annotation/8khc_H_VH.ann | sabdab_dataset/8khc/annotation/8khc_J_VL.ann | sabdab_dataset/8khc/imgt/8khc_H_H.ann | sabdab_dataset/8khc/imgt/8khc_J_L.ann | sabdab_dataset/8khc/sequence/8khc_raw.pdb | sabdab_dataset/8khc/sequence/8khc_H_VH.fa | sabdab_dataset/8khc/sequence/8khc_J_VL.fa | sabdab_dataset/8khc/structure/8khc.pdb | sabdab_dataset/8khc/structure/chothia/8khc.pdb | false | false | train |
8khd | H | J | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN | 04/17/24 | The interface structure of Omicron RBD binding to 5817 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cao, L., Wang, X. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8khd/abangle/8khd.abangle | sabdab_dataset/8khd/annotation/8khd_H_VH.ann | sabdab_dataset/8khd/annotation/8khd_J_VL.ann | sabdab_dataset/8khd/imgt/8khd_H_H.ann | sabdab_dataset/8khd/imgt/8khd_J_L.ann | sabdab_dataset/8khd/sequence/8khd_raw.pdb | sabdab_dataset/8khd/sequence/8khd_H_VH.fa | sabdab_dataset/8khd/sequence/8khd_J_VL.fa | sabdab_dataset/8khd/structure/8khd.pdb | sabdab_dataset/8khd/structure/chothia/8khd.pdb | false | false | validation |
8khr | H | L | 0 | C | A | B | protein | protein | protein | NA | NA | NA | soluble gp42 | envelope glycoprotein h | envelope glycoprotein l | VIRAL PROTEIN/IMMUNE SYSTEM | 06/19/24 | Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1 | Epstein-Barr virus (strain GD1); Homo sapiens | homo sapiens | homo sapiens | epstein-barr virus (strain gd1) | epstein-barr virus (strain gd1) | epstein-barr virus (strain gd1) | Fang, X.Y., Zhao, G.X., Zeng, M.S., Liu, Z. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8khr/abangle/8khr.abangle | sabdab_dataset/8khr/annotation/8khr_H_VH.ann | sabdab_dataset/8khr/annotation/8khr_L_VL.ann | sabdab_dataset/8khr/imgt/8khr_H_H.ann | sabdab_dataset/8khr/imgt/8khr_L_L.ann | sabdab_dataset/8khr/sequence/8khr_raw.pdb | sabdab_dataset/8khr/sequence/8khr_H_VH.fa | sabdab_dataset/8khr/sequence/8khr_L_VL.fa | sabdab_dataset/8khr/structure/8khr.pdb | sabdab_dataset/8khr/structure/chothia/8khr.pdb | false | false | validation |
8odx | H | L | 0 | A | protein | null | interleukin-12 receptor subunit beta-1 | CYTOKINE | 02/07/24 | Interleukin 12 receptor subunit beta-1 Fn domains in complex with antagonistic FAb4 fragment and VHH. | Homo sapiens; Homo sapiens x Mus musculus hybrid cell line; Lama glama | homo sapiens x mus musculus hybrid cell line | homo sapiens x mus musculus hybrid cell line | homo sapiens | Bloch, Y., Savvides, S.N. | 4.4 | X-RAY DIFFRACTION | 0.312 | 0.28 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8odx/abangle/8odx.abangle | sabdab_dataset/8odx/annotation/8odx_H_VH.ann | sabdab_dataset/8odx/annotation/8odx_L_VL.ann | sabdab_dataset/8odx/imgt/8odx_H_H.ann | sabdab_dataset/8odx/imgt/8odx_L_L.ann | sabdab_dataset/8odx/sequence/8odx_raw.pdb | sabdab_dataset/8odx/sequence/8odx_H_VH.fa | sabdab_dataset/8odx/sequence/8odx_L_VL.fa | sabdab_dataset/8odx/structure/8odx.pdb | sabdab_dataset/8odx/structure/chothia/8odx.pdb | true | false | validation |
8odx | K | null | 0 | null | null | null | null | CYTOKINE | 02/07/24 | Interleukin 12 receptor subunit beta-1 Fn domains in complex with antagonistic FAb4 fragment and VHH. | Homo sapiens; Homo sapiens x Mus musculus hybrid cell line; Lama glama | lama glama | null | null | Bloch, Y., Savvides, S.N. | 4.4 | X-RAY DIFFRACTION | 0.312 | 0.28 | false | true | IGHV1 | null | null | null | null | null | null | null | sabdab_dataset/8odx/abangle/8odx.abangle | sabdab_dataset/8odx/annotation/8odx_K_VH.ann | null | sabdab_dataset/8odx/imgt/8odx_K_H.ann | null | sabdab_dataset/8odx/sequence/8odx_raw.pdb | sabdab_dataset/8odx/sequence/8odx_K_VH.fa | null | sabdab_dataset/8odx/structure/8odx.pdb | sabdab_dataset/8odx/structure/chothia/8odx.pdb | true | false | train |
8og0 | H | L | 0 | P | peptide | null | alpha-synuclein | IMMUNE SYSTEM | 03/27/24 | Crystal structure of MJF14-6-4-2 Fab fragment in complex with epitope peptide | Oryctolagus cuniculus; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Tars, K., Lieknina, I. | 1.712 | X-RAY DIFFRACTION | 0.231 | 0.195 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8og0/abangle/8og0.abangle | sabdab_dataset/8og0/annotation/8og0_H_VH.ann | sabdab_dataset/8og0/annotation/8og0_L_VL.ann | sabdab_dataset/8og0/imgt/8og0_H_H.ann | sabdab_dataset/8og0/imgt/8og0_L_L.ann | sabdab_dataset/8og0/sequence/8og0_raw.pdb | sabdab_dataset/8og0/sequence/8og0_H_VH.fa | sabdab_dataset/8og0/sequence/8og0_L_VL.fa | sabdab_dataset/8og0/structure/8og0.pdb | sabdab_dataset/8og0/structure/chothia/8og0.pdb | true | false | test |
8oi2 | B | null | 0 | A | protein | null | albumin | IMMUNE SYSTEM | 04/03/24 | Crystal structure of Alb1 megabody in complex with human serum albumin | Helicobacter pylori G27; Homo sapiens | helicobacter pylori g27 | null | homo sapiens | De Felice, S., Zoia, G., Romanyuk, Z., Pardon, E., Steyaert, J., Angelini, A., Cendron, L. | 3.3 | X-RAY DIFFRACTION | 0.277 | 0.226 | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8oi2/annotation/8oi2_B_VH.ann | null | sabdab_dataset/8oi2/imgt/8oi2_B_H.ann | null | sabdab_dataset/8oi2/sequence/8oi2_raw.pdb | sabdab_dataset/8oi2/sequence/8oi2_B_VH.fa | null | sabdab_dataset/8oi2/structure/8oi2.pdb | sabdab_dataset/8oi2/structure/chothia/8oi2.pdb | false | false | validation |
8ojs | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/23 | Crystal structure of the human IgD Fab - structure Fab1 | Homo sapiens | homo sapiens | homo sapiens | null | Davies, A.M., Beavil, R.L., McDonnell, J.M. | 2.75 | X-RAY DIFFRACTION | 0.256 | 0.216 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8ojs/abangle/8ojs.abangle | sabdab_dataset/8ojs/annotation/8ojs_B_VH.ann | sabdab_dataset/8ojs/annotation/8ojs_A_VL.ann | sabdab_dataset/8ojs/imgt/8ojs_B_H.ann | sabdab_dataset/8ojs/imgt/8ojs_A_L.ann | sabdab_dataset/8ojs/sequence/8ojs_raw.pdb | sabdab_dataset/8ojs/sequence/8ojs_B_VH.fa | sabdab_dataset/8ojs/sequence/8ojs_A_VL.fa | sabdab_dataset/8ojs/structure/8ojs.pdb | sabdab_dataset/8ojs/structure/chothia/8ojs.pdb | false | false | train |
8ojs | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/23 | Crystal structure of the human IgD Fab - structure Fab1 | Homo sapiens | homo sapiens | homo sapiens | null | Davies, A.M., Beavil, R.L., McDonnell, J.M. | 2.75 | X-RAY DIFFRACTION | 0.256 | 0.216 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8ojs/abangle/8ojs.abangle | sabdab_dataset/8ojs/annotation/8ojs_H_VH.ann | sabdab_dataset/8ojs/annotation/8ojs_L_VL.ann | sabdab_dataset/8ojs/imgt/8ojs_H_H.ann | sabdab_dataset/8ojs/imgt/8ojs_L_L.ann | sabdab_dataset/8ojs/sequence/8ojs_raw.pdb | sabdab_dataset/8ojs/sequence/8ojs_H_VH.fa | sabdab_dataset/8ojs/sequence/8ojs_L_VL.fa | sabdab_dataset/8ojs/structure/8ojs.pdb | sabdab_dataset/8ojs/structure/chothia/8ojs.pdb | false | false | train |
8ojt | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/23 | Crystal structure of the human IgD Fab - structure Fab2 | Homo sapiens | homo sapiens | homo sapiens | null | Davies, A.M., Beavil, R.L., McDonnell, J.M. | 1.55 | X-RAY DIFFRACTION | 0.198 | 0.161 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8ojt/abangle/8ojt.abangle | sabdab_dataset/8ojt/annotation/8ojt_H_VH.ann | sabdab_dataset/8ojt/annotation/8ojt_L_VL.ann | sabdab_dataset/8ojt/imgt/8ojt_H_H.ann | sabdab_dataset/8ojt/imgt/8ojt_L_L.ann | sabdab_dataset/8ojt/sequence/8ojt_raw.pdb | sabdab_dataset/8ojt/sequence/8ojt_H_VH.fa | sabdab_dataset/8ojt/sequence/8ojt_L_VL.fa | sabdab_dataset/8ojt/structure/8ojt.pdb | sabdab_dataset/8ojt/structure/chothia/8ojt.pdb | false | false | train |
8oju | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/23 | Crystal structure of the human IgD Fab - structure Fab3 | Homo sapiens | homo sapiens | homo sapiens | null | Davies, A.M., Beavil, R.L., McDonnell, J.M. | 1.45 | X-RAY DIFFRACTION | 0.189 | 0.157 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8oju/abangle/8oju.abangle | sabdab_dataset/8oju/annotation/8oju_H_VH.ann | sabdab_dataset/8oju/annotation/8oju_L_VL.ann | sabdab_dataset/8oju/imgt/8oju_H_H.ann | sabdab_dataset/8oju/imgt/8oju_L_L.ann | sabdab_dataset/8oju/sequence/8oju_raw.pdb | sabdab_dataset/8oju/sequence/8oju_H_VH.fa | sabdab_dataset/8oju/sequence/8oju_L_VL.fa | sabdab_dataset/8oju/structure/8oju.pdb | sabdab_dataset/8oju/structure/chothia/8oju.pdb | false | false | train |
8ojv | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/14/23 | Crystal structure of the human IgD Fab - structure Fab4 | Homo sapiens | homo sapiens | homo sapiens | null | Davies, A.M., Beavil, R.L., McDonnell, J.M. | 2.1 | X-RAY DIFFRACTION | 0.216 | 0.179 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8ojv/abangle/8ojv.abangle | sabdab_dataset/8ojv/annotation/8ojv_H_VH.ann | sabdab_dataset/8ojv/annotation/8ojv_L_VL.ann | sabdab_dataset/8ojv/imgt/8ojv_H_H.ann | sabdab_dataset/8ojv/imgt/8ojv_L_L.ann | sabdab_dataset/8ojv/sequence/8ojv_raw.pdb | sabdab_dataset/8ojv/sequence/8ojv_H_VH.fa | sabdab_dataset/8ojv/sequence/8ojv_L_VL.fa | sabdab_dataset/8ojv/structure/8ojv.pdb | sabdab_dataset/8ojv/structure/chothia/8ojv.pdb | false | false | train |
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