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  1. sabdab_dataset/1i8i/abangle/1i8i.abangle +2 -0
  2. sabdab_dataset/1i8i/annotation/1i8i_A_VL.ann +107 -0
  3. sabdab_dataset/1i8i/annotation/1i8i_B_VH.ann +120 -0
  4. sabdab_dataset/1i8i/imgt/1i8i_A_L.ann +3 -0
  5. sabdab_dataset/1i8i/imgt/1i8i_B_H.ann +3 -0
  6. sabdab_dataset/1i8i/sequence/1i8i_A_VL.fa +6 -0
  7. sabdab_dataset/1i8i/sequence/1i8i_B_VH.fa +6 -0
  8. sabdab_dataset/1i8i/sequence/1i8i_raw.pdb +6 -0
  9. sabdab_dataset/1i8i/structure/1i8i.pdb +0 -0
  10. sabdab_dataset/1i8i/structure/chothia/1i8i.pdb +0 -0
  11. sabdab_dataset/2ywz/annotation/2ywz_A_VH.ann +111 -0
  12. sabdab_dataset/3k74/annotation/3k74_B_VH.ann +115 -0
  13. sabdab_dataset/3k74/imgt/3k74_B_H.ann +3 -0
  14. sabdab_dataset/3k74/sequence/3k74_B_VH.fa +6 -0
  15. sabdab_dataset/3k74/sequence/3k74_raw.pdb +4 -0
  16. sabdab_dataset/3k74/structure/3k74.pdb +0 -0
  17. sabdab_dataset/3k74/structure/chothia/3k74.pdb +0 -0
  18. sabdab_dataset/5ugy/abangle/5ugy.abangle +4 -0
  19. sabdab_dataset/5ugy/annotation/5ugy_H_VH.ann +126 -0
  20. sabdab_dataset/5ugy/annotation/5ugy_I_VH.ann +126 -0
  21. sabdab_dataset/5ugy/annotation/5ugy_J_VH.ann +126 -0
  22. sabdab_dataset/5ugy/annotation/5ugy_L_VL.ann +107 -0
  23. sabdab_dataset/5ugy/annotation/5ugy_M_VL.ann +107 -0
  24. sabdab_dataset/5ugy/annotation/5ugy_N_VL.ann +107 -0
  25. sabdab_dataset/5ugy/imgt/5ugy_H_H.ann +4 -0
  26. sabdab_dataset/5ugy/imgt/5ugy_I_H.ann +4 -0
  27. sabdab_dataset/5ugy/imgt/5ugy_J_H.ann +4 -0
  28. sabdab_dataset/5ugy/imgt/5ugy_L_L.ann +4 -0
  29. sabdab_dataset/5ugy/imgt/5ugy_M_L.ann +4 -0
  30. sabdab_dataset/5ugy/imgt/5ugy_N_L.ann +4 -0
  31. sabdab_dataset/5ugy/sequence/5ugy_H_VH.fa +6 -0
  32. sabdab_dataset/5ugy/sequence/5ugy_I_VH.fa +6 -0
  33. sabdab_dataset/5ugy/sequence/5ugy_J_VH.fa +6 -0
  34. sabdab_dataset/5ugy/sequence/5ugy_L_VL.fa +6 -0
  35. sabdab_dataset/5ugy/sequence/5ugy_M_VL.fa +6 -0
  36. sabdab_dataset/5ugy/sequence/5ugy_N_VL.fa +6 -0
  37. sabdab_dataset/5ugy/sequence/5ugy_raw.pdb +24 -0
  38. sabdab_dataset/5ugy/structure/5ugy.pdb +0 -0
  39. sabdab_dataset/5ugy/structure/chothia/5ugy.pdb +0 -0
  40. sabdab_dataset/6sf6/abangle/6sf6.abangle +3 -0
  41. sabdab_dataset/6sf6/annotation/6sf6_A_VH.ann +123 -0
  42. sabdab_dataset/6sf6/annotation/6sf6_B_VL.ann +112 -0
  43. sabdab_dataset/6sf6/annotation/6sf6_H_VH.ann +123 -0
  44. sabdab_dataset/6sf6/annotation/6sf6_L_VL.ann +112 -0
  45. sabdab_dataset/6sf6/imgt/6sf6_A_H.ann +4 -0
  46. sabdab_dataset/6sf6/imgt/6sf6_B_L.ann +4 -0
  47. sabdab_dataset/6sf6/imgt/6sf6_H_H.ann +4 -0
  48. sabdab_dataset/6sf6/imgt/6sf6_L_L.ann +4 -0
  49. sabdab_dataset/6sf6/sequence/6sf6_A_VH.fa +6 -0
  50. sabdab_dataset/6sf6/sequence/6sf6_B_VL.fa +6 -0
sabdab_dataset/1i8i/abangle/1i8i.abangle ADDED
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+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
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+ 1i8i B A 0 -60.19 71.34 117.45 117.97 80.14 16.14
sabdab_dataset/1i8i/annotation/1i8i_A_VL.ann ADDED
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sabdab_dataset/1i8i/annotation/1i8i_B_VH.ann ADDED
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+ H1 Q
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sabdab_dataset/1i8i/imgt/1i8i_A_L.ann ADDED
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1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
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+ J Mus_musculus IGKJ5*01 IG IGKJ IGKJ5 IGKJ5 NA True
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+ V Mus_musculus IGKV17-127*01 IG IGKV IGKV17 IGKV17-127 NA True
sabdab_dataset/1i8i/imgt/1i8i_B_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
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+ J Mus_musculus IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
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+ V Mus_musculus IGHV5-6*03 IG IGHV IGHV5 IGHV5-6 NA True
sabdab_dataset/1i8i/sequence/1i8i_A_VL.fa ADDED
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+ >1i8i_A|seqres|full
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+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
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+ >1i8i_A|seqres|region: L
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+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
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+ >1i8i_A|structure|full
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+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEI-
sabdab_dataset/1i8i/sequence/1i8i_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
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+ >1i8i_B|seqres|full
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+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSGIEGR
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+ >1i8i_B|seqres|region: H
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+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSG----
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+ >1i8i_B|structure|full
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+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVS-----
sabdab_dataset/1i8i/sequence/1i8i_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
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+ >1i8i_A|type: L
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+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
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+ >1i8i_C|type: non-ab
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+ EEKKGNYVVTDH
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+ >1i8i_B|type: H
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+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSGIEGR
sabdab_dataset/1i8i/structure/1i8i.pdb ADDED
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sabdab_dataset/1i8i/structure/chothia/1i8i.pdb ADDED
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sabdab_dataset/2ywz/annotation/2ywz_A_VH.ann ADDED
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sabdab_dataset/3k74/annotation/3k74_B_VH.ann ADDED
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sabdab_dataset/3k74/imgt/3k74_B_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Lama_glama IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
3
+ V Camelus_dromedarius IGHV1S23*01 IG IGHV IGHV1 IGHV1S23 NA True
sabdab_dataset/3k74/sequence/3k74_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >3k74_B|seqres|full
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+ >3k74_B|seqres|region: H
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+ QLQESGGGLVQPGGSLRLSCAASGFTFNNYWMYWVRRAPGKGLEWVSMINPGGIITKYAESVKGRFTISRDNAKNTLYLQMNSLTSEDTAVYYCAKDWATGLAKKGQGTQVTVSS
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+ >3k74_B|structure|full
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sabdab_dataset/3k74/sequence/3k74_raw.pdb ADDED
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sabdab_dataset/3k74/structure/3k74.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/3k74/structure/chothia/3k74.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/5ugy/abangle/5ugy.abangle ADDED
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+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
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sabdab_dataset/5ugy/imgt/5ugy_H_H.ann ADDED
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1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
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3
+ J Homo_Sapiens IGHJ6*02 IG IGHJ ? IGHJ6 NA False
4
+ V Homo_Sapiens IGHV1-2*04 IG IGHV IGHV1 IGHV1-2 NA False
sabdab_dataset/5ugy/imgt/5ugy_I_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
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3
+ J Homo_Sapiens IGHJ6*02 IG IGHJ ? IGHJ6 NA False
4
+ V Homo_Sapiens IGHV1-2*04 IG IGHV IGHV1 IGHV1-2 NA False
sabdab_dataset/5ugy/imgt/5ugy_J_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_Sapiens IGHG1*03 IG IGHC ? IGHG1 IGg False
3
+ J Homo_Sapiens IGHJ6*02 IG IGHJ ? IGHJ6 NA False
4
+ V Homo_Sapiens IGHV1-2*04 IG IGHV IGHV1 IGHV1-2 NA False
sabdab_dataset/5ugy/imgt/5ugy_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_Sapiens IGLC2*01 IG IGLC ? IGLC2 NA False
3
+ J Homo_Sapiens IGLJ2*01 IG IGLJ ? IGLJ2 NA False
4
+ V Homo_Sapiens IGLV3-21*02 IG IGLV IGLV3 IGLV3-21 NA False
sabdab_dataset/5ugy/imgt/5ugy_M_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_Sapiens IGLC2*01 IG IGLC ? IGLC2 NA False
3
+ J Homo_Sapiens IGLJ2*01 IG IGLJ ? IGLJ2 NA False
4
+ V Homo_Sapiens IGLV3-21*02 IG IGLV IGLV3 IGLV3-21 NA False
sabdab_dataset/5ugy/imgt/5ugy_N_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Homo_Sapiens IGLC2*01 IG IGLC ? IGLC2 NA False
3
+ J Homo_Sapiens IGLJ2*01 IG IGLJ ? IGLJ2 NA False
4
+ V Homo_Sapiens IGLV3-21*02 IG IGLV IGLV3 IGLV3-21 NA False
sabdab_dataset/5ugy/sequence/5ugy_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_H|seqres|full
2
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
3
+ >5ugy_H|seqres|region: H
4
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSS-----------------------------------------------------------------------------------------------------
5
+ >5ugy_H|structure|full
6
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPS------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
sabdab_dataset/5ugy/sequence/5ugy_I_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_I|seqres|full
2
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
3
+ >5ugy_I|seqres|region: H
4
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSS-----------------------------------------------------------------------------------------------------
5
+ >5ugy_I|structure|full
6
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPS------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
sabdab_dataset/5ugy/sequence/5ugy_J_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_J|seqres|full
2
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
3
+ >5ugy_J|seqres|region: H
4
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSS-----------------------------------------------------------------------------------------------------
5
+ >5ugy_J|structure|full
6
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPS------GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
sabdab_dataset/5ugy/sequence/5ugy_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_L|seqres|full
2
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
3
+ >5ugy_L|seqres|region: L
4
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVL-------------------------------------------------------------------------------------------------------
5
+ >5ugy_L|structure|full
6
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
sabdab_dataset/5ugy/sequence/5ugy_M_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_M|seqres|full
2
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
3
+ >5ugy_M|seqres|region: L
4
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVL-------------------------------------------------------------------------------------------------------
5
+ >5ugy_M|structure|full
6
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
sabdab_dataset/5ugy/sequence/5ugy_N_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >5ugy_N|seqres|full
2
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
3
+ >5ugy_N|seqres|region: L
4
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVL-------------------------------------------------------------------------------------------------------
5
+ >5ugy_N|structure|full
6
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
sabdab_dataset/5ugy/sequence/5ugy_raw.pdb ADDED
@@ -0,0 +1,24 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >5ugy_A|type: non-ab
2
+ EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
3
+ >5ugy_C|type: non-ab
4
+ EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
5
+ >5ugy_B|type: non-ab
6
+ GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
7
+ >5ugy_E|type: non-ab
8
+ EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
9
+ >5ugy_D|type: non-ab
10
+ GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
11
+ >5ugy_F|type: non-ab
12
+ GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
13
+ >5ugy_I|type: H
14
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
15
+ >5ugy_H|type: H
16
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
17
+ >5ugy_J|type: H
18
+ EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYHINWVRQAPGQGLEWMGWIHPNSGDTNYAQKFQGWVTMTRDTAISTAYMEVNGLKSDDTAVYYCARGGLEPRSVDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
19
+ >5ugy_M|type: L
20
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21
+ >5ugy_L|type: L
22
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23
+ >5ugy_N|type: L
24
+ SVLTQPPSVSVAPGQTARITCGGNDIGRKSVHWNQQKPGQAPVLVVCYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
sabdab_dataset/5ugy/structure/5ugy.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/5ugy/structure/chothia/5ugy.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/6sf6/abangle/6sf6.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 6sf6 H L 0 -57.04 71.36 116.90 121.23 81.96 16.60
3
+ 6sf6 A B 0 -60.90 71.00 115.54 120.35 80.01 16.33
sabdab_dataset/6sf6/annotation/6sf6_A_VH.ann ADDED
@@ -0,0 +1,123 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 A
10
+ H10 E
11
+ H11 L
12
+ H12 A
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 V
19
+ H19 N
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 K
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 Y
28
+ H28 T
29
+ H29 F
30
+ H30 T
31
+ H31 N
32
+ H32 Y
33
+ H33 W
34
+ H34 V
35
+ H35 H
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
+ H39 Q
40
+ H40 R
41
+ H41 P
42
+ H42 G
43
+ H43 Q
44
+ H44 G
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 Y
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
+ H53 S
55
+ H54 N
56
+ H55 T
57
+ H56 Y
58
+ H57 I
59
+ H58 S
60
+ H59 Y
61
+ H60 N
62
+ H61 Q
63
+ H62 Q
64
+ H63 F
65
+ H64 K
66
+ H65 D
67
+ H66 K
68
+ H67 A
69
+ H68 T
70
+ H69 L
71
+ H70 T
72
+ H71 A
73
+ H72 D
74
+ H73 K
75
+ H74 S
76
+ H75 S
77
+ H76 S
78
+ H77 T
79
+ H78 A
80
+ H79 Y
81
+ H80 M
82
+ H81 Q
83
+ H82 L
84
+ H82A S
85
+ H82B R
86
+ H82C L
87
+ H83 T
88
+ H84 Y
89
+ H85 E
90
+ H86 D
91
+ H87 S
92
+ H88 S
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 R
99
+ H95 G
100
+ H96 G
101
+ H97 F
102
+ H98 F
103
+ H99 Y
104
+ H100 D
105
+ H100A Y
106
+ H100B D
107
+ H100C V
108
+ H100D W
109
+ H100E Y
110
+ H100F F
111
+ H101 D
112
+ H102 V
113
+ H103 W
114
+ H104 G
115
+ H105 T
116
+ H106 G
117
+ H107 T
118
+ H108 T
119
+ H109 V
120
+ H110 T
121
+ H111 V
122
+ H112 S
123
+ H113 S
sabdab_dataset/6sf6/annotation/6sf6_B_VL.ann ADDED
@@ -0,0 +1,112 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 V
3
+ L3 L
4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 I
8
+ L8 P
9
+ L9 L
10
+ L10 S
11
+ L11 L
12
+ L12 P
13
+ L13 V
14
+ L14 S
15
+ L15 L
16
+ L16 G
17
+ L17 D
18
+ L18 Q
19
+ L19 A
20
+ L20 S
21
+ L21 I
22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 S
26
+ L26 S
27
+ L27 Q
28
+ L28 N
29
+ L29 I
30
+ L30 V
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
35
+ L30E N
36
+ L31 T
37
+ L32 Y
38
+ L33 L
39
+ L34 E
40
+ L35 W
41
+ L36 Y
42
+ L37 L
43
+ L38 Q
44
+ L39 K
45
+ L40 P
46
+ L41 G
47
+ L42 Q
48
+ L43 S
49
+ L44 P
50
+ L45 K
51
+ L46 L
52
+ L47 L
53
+ L48 I
54
+ L49 Y
55
+ L50 K
56
+ L51 V
57
+ L52 S
58
+ L53 N
59
+ L54 R
60
+ L55 F
61
+ L56 S
62
+ L57 G
63
+ L58 V
64
+ L59 P
65
+ L60 D
66
+ L61 R
67
+ L62 F
68
+ L63 S
69
+ L64 G
70
+ L65 S
71
+ L66 G
72
+ L67 S
73
+ L68 G
74
+ L69 T
75
+ L70 D
76
+ L71 F
77
+ L72 T
78
+ L73 L
79
+ L74 K
80
+ L75 I
81
+ L76 S
82
+ L77 R
83
+ L78 V
84
+ L79 E
85
+ L80 A
86
+ L81 E
87
+ L82 D
88
+ L83 L
89
+ L84 G
90
+ L85 V
91
+ L86 Y
92
+ L87 Y
93
+ L88 C
94
+ L89 F
95
+ L90 Q
96
+ L91 G
97
+ L92 S
98
+ L93 H
99
+ L94 V
100
+ L95 P
101
+ L96 F
102
+ L97 T
103
+ L98 F
104
+ L99 G
105
+ L100 S
106
+ L101 G
107
+ L102 T
108
+ L103 K
109
+ L104 L
110
+ L105 E
111
+ L106 I
112
+ L107 K
sabdab_dataset/6sf6/annotation/6sf6_H_VH.ann ADDED
@@ -0,0 +1,123 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 A
10
+ H10 E
11
+ H11 L
12
+ H12 A
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 V
19
+ H19 N
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 K
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 Y
28
+ H28 T
29
+ H29 F
30
+ H30 T
31
+ H31 N
32
+ H32 Y
33
+ H33 W
34
+ H34 V
35
+ H35 H
36
+ H36 W
37
+ H37 V
38
+ H38 K
39
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40
+ H40 R
41
+ H41 P
42
+ H42 G
43
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44
+ H44 G
45
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46
+ H46 E
47
+ H47 W
48
+ H48 I
49
+ H49 G
50
+ H50 Y
51
+ H51 I
52
+ H52 N
53
+ H52A P
54
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55
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56
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57
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58
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59
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60
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61
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62
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63
+ H62 Q
64
+ H63 F
65
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66
+ H65 D
67
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68
+ H67 A
69
+ H68 T
70
+ H69 L
71
+ H70 T
72
+ H71 A
73
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74
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75
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76
+ H75 S
77
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78
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79
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80
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81
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82
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83
+ H82 L
84
+ H82A S
85
+ H82B R
86
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87
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88
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89
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90
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91
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92
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93
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94
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95
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96
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97
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98
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99
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100
+ H96 G
101
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102
+ H98 F
103
+ H99 Y
104
+ H100 D
105
+ H100A Y
106
+ H100B D
107
+ H100C V
108
+ H100D W
109
+ H100E Y
110
+ H100F F
111
+ H101 D
112
+ H102 V
113
+ H103 W
114
+ H104 G
115
+ H105 T
116
+ H106 G
117
+ H107 T
118
+ H108 T
119
+ H109 V
120
+ H110 T
121
+ H111 V
122
+ H112 S
123
+ H113 S
sabdab_dataset/6sf6/annotation/6sf6_L_VL.ann ADDED
@@ -0,0 +1,112 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 V
3
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4
+ L4 M
5
+ L5 T
6
+ L6 Q
7
+ L7 I
8
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9
+ L9 L
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+ L10 S
11
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13
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+ L15 L
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+ L16 G
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+ L17 D
18
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19
+ L19 A
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22
+ L22 S
23
+ L23 C
24
+ L24 R
25
+ L25 S
26
+ L26 S
27
+ L27 Q
28
+ L28 N
29
+ L29 I
30
+ L30 V
31
+ L30A H
32
+ L30B S
33
+ L30C N
34
+ L30D G
35
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36
+ L31 T
37
+ L32 Y
38
+ L33 L
39
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40
+ L35 W
41
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42
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43
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44
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45
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46
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47
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48
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49
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55
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57
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58
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59
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64
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67
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69
+ L64 G
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73
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81
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83
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84
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86
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88
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89
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90
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91
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92
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93
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94
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95
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96
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97
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98
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99
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100
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101
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102
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103
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104
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105
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106
+ L101 G
107
+ L102 T
108
+ L103 K
109
+ L104 L
110
+ L105 E
111
+ L106 I
112
+ L107 K
sabdab_dataset/6sf6/imgt/6sf6_A_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGHG1*02 IG IGHC ? IGHG1 IGg False
3
+ J Mus_Musculus IGHJ1*03 IG IGHJ ? IGHJ1 NA False
4
+ V Mus_Musculus IGHV1-7*01 IG IGHV IGHV1 IGHV1-7 NA False
sabdab_dataset/6sf6/imgt/6sf6_B_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGKC*03 IG IGKC ? IGKC NA False
3
+ J Mus_Musculus IGKJ4*01 IG IGKJ ? IGKJ4 NA False
4
+ V Mus_Musculus IGKV1-117*01 IG IGKV IGKV1 IGKV1-117 NA False
sabdab_dataset/6sf6/imgt/6sf6_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGHG1*02 IG IGHC ? IGHG1 IGg False
3
+ J Mus_Musculus IGHJ1*03 IG IGHJ ? IGHJ1 NA False
4
+ V Mus_Musculus IGHV1-7*01 IG IGHV IGHV1 IGHV1-7 NA False
sabdab_dataset/6sf6/imgt/6sf6_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGKC*03 IG IGKC ? IGKC NA False
3
+ J Mus_Musculus IGKJ4*01 IG IGKJ ? IGKJ4 NA False
4
+ V Mus_Musculus IGKV1-117*01 IG IGKV IGKV1 IGKV1-117 NA False
sabdab_dataset/6sf6/sequence/6sf6_A_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >6sf6_A|seqres|full
2
+ QVQLQQSGAELAKPGASVNLSCKASGYTFTNYWVHWVKQRPGQGLEWIGYINPSNTYISYNQQFKDKATLTADKSSSTAYMQLSRLTYEDSSVYYCARGGFFYDYDVWYFDVWGTGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICT
3
+ >6sf6_A|seqres|region: H
4
+ QVQLQQSGAELAKPGASVNLSCKASGYTFTNYWVHWVKQRPGQGLEWIGYINPSNTYISYNQQFKDKATLTADKSSSTAYMQLSRLTYEDSSVYYCARGGFFYDYDVWYFDVWGTGTTVTVSS--------------------------------------------------------------------------------------------------------------
5
+ >6sf6_A|structure|full
6
+ QVQLQQSGAELAKPGASVNLSCKASGYTFTNYWVHWVKQRPGQGLEWIGYINPSNTYISYNQQFKDKATLTADKSSSTAYMQLSRLTYEDSSVYYCARGGFFYDYDVWYFDVWGTGTTVTVSSAKTTPPSVYPLAP------NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP-----------
sabdab_dataset/6sf6/sequence/6sf6_B_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >6sf6_B|seqres|full
2
+ DVLMTQIPLSLPVSLGDQASISCRSSQNIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >6sf6_B|seqres|region: L
4
+ DVLMTQIPLSLPVSLGDQASISCRSSQNIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIK-----------------------------------------------------------------------------------------------------------
5
+ >6sf6_B|structure|full
6
+ DVLMTQIPLSLPVSLGDQASISCRSSQNIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE-