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  1. sabdab_dataset/1fbi/abangle/1fbi.abangle +3 -0
  2. sabdab_dataset/1fbi/annotation/1fbi_H_VH.ann +122 -0
  3. sabdab_dataset/1fbi/annotation/1fbi_L_VL.ann +109 -0
  4. sabdab_dataset/1fbi/annotation/1fbi_P_VL.ann +109 -0
  5. sabdab_dataset/1fbi/annotation/1fbi_Q_VH.ann +122 -0
  6. sabdab_dataset/1fbi/imgt/1fbi_H_H.ann +4 -0
  7. sabdab_dataset/1fbi/imgt/1fbi_L_L.ann +4 -0
  8. sabdab_dataset/1fbi/imgt/1fbi_P_L.ann +4 -0
  9. sabdab_dataset/1fbi/imgt/1fbi_Q_H.ann +4 -0
  10. sabdab_dataset/1fbi/sequence/1fbi_H_VH.fa +6 -0
  11. sabdab_dataset/1fbi/sequence/1fbi_L_VL.fa +6 -0
  12. sabdab_dataset/1fbi/sequence/1fbi_P_VL.fa +6 -0
  13. sabdab_dataset/1fbi/sequence/1fbi_Q_VH.fa +6 -0
  14. sabdab_dataset/1fbi/sequence/1fbi_raw.pdb +12 -0
  15. sabdab_dataset/1fbi/structure/1fbi.pdb +0 -0
  16. sabdab_dataset/1fbi/structure/chothia/1fbi.pdb +0 -0
  17. sabdab_dataset/1i8k/abangle/1i8k.abangle +2 -0
  18. sabdab_dataset/1i8k/annotation/1i8k_A_VL.ann +107 -0
  19. sabdab_dataset/1i8k/annotation/1i8k_B_VH.ann +120 -0
  20. sabdab_dataset/1i8k/imgt/1i8k_A_L.ann +3 -0
  21. sabdab_dataset/1i8k/imgt/1i8k_B_H.ann +3 -0
  22. sabdab_dataset/1i8k/sequence/1i8k_A_VL.fa +6 -0
  23. sabdab_dataset/1i8k/sequence/1i8k_B_VH.fa +6 -0
  24. sabdab_dataset/1i8k/sequence/1i8k_raw.pdb +6 -0
  25. sabdab_dataset/1i8k/structure/1i8k.pdb +0 -0
  26. sabdab_dataset/1i8k/structure/chothia/1i8k.pdb +0 -0
  27. sabdab_dataset/2r9h/abangle/2r9h.abangle +3 -0
  28. sabdab_dataset/2r9h/annotation/2r9h_C_VH.ann +120 -0
  29. sabdab_dataset/2r9h/annotation/2r9h_D_VL.ann +109 -0
  30. sabdab_dataset/2r9h/annotation/2r9h_E_VH.ann +120 -0
  31. sabdab_dataset/2r9h/annotation/2r9h_F_VL.ann +109 -0
  32. sabdab_dataset/2r9h/imgt/2r9h_C_H.ann +4 -0
  33. sabdab_dataset/2r9h/imgt/2r9h_D_L.ann +4 -0
  34. sabdab_dataset/2r9h/imgt/2r9h_E_H.ann +4 -0
  35. sabdab_dataset/2r9h/imgt/2r9h_F_L.ann +4 -0
  36. sabdab_dataset/2r9h/sequence/2r9h_C_VH.fa +6 -0
  37. sabdab_dataset/2r9h/sequence/2r9h_D_VL.fa +6 -0
  38. sabdab_dataset/2r9h/sequence/2r9h_E_VH.fa +6 -0
  39. sabdab_dataset/2r9h/sequence/2r9h_F_VL.fa +6 -0
  40. sabdab_dataset/2r9h/sequence/2r9h_raw.pdb +12 -0
  41. sabdab_dataset/2r9h/structure/2r9h.pdb +0 -0
  42. sabdab_dataset/2r9h/structure/chothia/2r9h.pdb +0 -0
  43. sabdab_dataset/2x1p/annotation/2x1p_A_VH.ann +127 -0
  44. sabdab_dataset/2x1p/annotation/2x1p_C_VH.ann +127 -0
  45. sabdab_dataset/2x1p/annotation/2x1p_D_VH.ann +127 -0
  46. sabdab_dataset/2x1p/imgt/2x1p_A_H.ann +3 -0
  47. sabdab_dataset/2x1p/imgt/2x1p_C_H.ann +3 -0
  48. sabdab_dataset/2x1p/imgt/2x1p_D_H.ann +3 -0
  49. sabdab_dataset/2znw/abangle/2znw.abangle +3 -0
  50. sabdab_dataset/2znw/annotation/2znw_A_VH.ann +113 -0
sabdab_dataset/1fbi/abangle/1fbi.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1fbi H L 0 -62.94 73.75 112.37 123.13 78.72 15.53
3
+ 1fbi Q P 0 -61.95 73.42 113.29 123.04 78.25 15.83
sabdab_dataset/1fbi/annotation/1fbi_H_VH.ann ADDED
@@ -0,0 +1,122 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
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+ H3 Q
4
+ H4 L
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+ H5 Q
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+ H6 Q
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+ H7 P
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+ H8 G
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+ H112 S
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+ H113 S
sabdab_dataset/1fbi/annotation/1fbi_L_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ L1 D
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sabdab_dataset/1fbi/annotation/1fbi_P_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ L1 D
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sabdab_dataset/1fbi/annotation/1fbi_Q_VH.ann ADDED
@@ -0,0 +1,122 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
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+ H2 V
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sabdab_dataset/1fbi/imgt/1fbi_H_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG1*01 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Mus_musculus IGHJ2*02 IG IGHJ IGHJ2 IGHJ2 NA True
4
+ V Mus_musculus IGHV1-69*02 IG IGHV IGHV1 IGHV1-69 NA True
sabdab_dataset/1fbi/imgt/1fbi_L_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ1*02 IG IGKJ IGKJ1 IGKJ1 NA True
4
+ V Mus_musculus IGKV10-96*01 IG IGKV IGKV10 IGKV10-96 NA True
sabdab_dataset/1fbi/imgt/1fbi_P_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGKC*01 IG IGKC IGKC IGKC NA True
3
+ J Mus_musculus IGKJ1*02 IG IGKJ IGKJ1 IGKJ1 NA True
4
+ V Mus_musculus IGKV10-96*01 IG IGKV IGKV10 IGKV10-96 NA True
sabdab_dataset/1fbi/imgt/1fbi_Q_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_musculus IGHG1*01 IG IGHC IGHG1 IGHG1 IGg True
3
+ J Mus_musculus IGHJ2*02 IG IGHJ IGHJ2 IGHJ2 NA True
4
+ V Mus_musculus IGHV1-69*02 IG IGHV IGHV1 IGHV1-69 NA True
sabdab_dataset/1fbi/sequence/1fbi_H_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1fbi_H|seqres|full
2
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
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+ >1fbi_H|seqres|region: H
4
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSS---------------------------------------------------------------------------------------------------
5
+ >1fbi_H|structure|full
6
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
sabdab_dataset/1fbi/sequence/1fbi_L_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1fbi_L|seqres|full
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+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
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+ >1fbi_L|seqres|region: L
4
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRA---------------------------------------------------------------------------------------------------------
5
+ >1fbi_L|structure|full
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+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1fbi/sequence/1fbi_P_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1fbi_P|seqres|full
2
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
3
+ >1fbi_P|seqres|region: L
4
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRA---------------------------------------------------------------------------------------------------------
5
+ >1fbi_P|structure|full
6
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
sabdab_dataset/1fbi/sequence/1fbi_Q_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1fbi_Q|seqres|full
2
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
3
+ >1fbi_Q|seqres|region: H
4
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSS---------------------------------------------------------------------------------------------------
5
+ >1fbi_Q|structure|full
6
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
sabdab_dataset/1fbi/sequence/1fbi_raw.pdb ADDED
@@ -0,0 +1,12 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >1fbi_H|type: H
2
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
3
+ >1fbi_L|type: L
4
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
5
+ >1fbi_Q|type: H
6
+ QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNYNEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP
7
+ >1fbi_P|type: L
8
+ DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQKKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTIRNLEQEDIATYFCQQGYTLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
9
+ >1fbi_Y|type: non-ab
10
+ KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNSQATNRNTDGSTDYGVLQINSRWWCNDGRTPGSRNLCNIPCSALQSSDITATANCAKKIVSDGNGMNAWVAWRKHCKGTDVRVWIKGCRL
11
+ >1fbi_X|type: non-ab
12
+ KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNSQATNRNTDGSTDYGVLQINSRWWCNDGRTPGSRNLCNIPCSALQSSDITATANCAKKIVSDGNGMNAWVAWRKHCKGTDVRVWIKGCRL
sabdab_dataset/1fbi/structure/1fbi.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1fbi/structure/chothia/1fbi.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1i8k/abangle/1i8k.abangle ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 1i8k B A 0 -60.93 71.52 116.48 116.41 81.18 16.15
sabdab_dataset/1i8k/annotation/1i8k_A_VL.ann ADDED
@@ -0,0 +1,107 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 E
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 A
10
+ L10 S
11
+ L11 L
12
+ L12 S
13
+ L13 V
14
+ L14 A
15
+ L15 T
16
+ L16 G
17
+ L17 E
18
+ L18 K
19
+ L19 V
20
+ L20 T
21
+ L21 I
22
+ L22 R
23
+ L23 C
24
+ L24 M
25
+ L25 T
26
+ L26 S
27
+ L27 T
28
+ L28 D
29
+ L29 I
30
+ L30 D
31
+ L31 D
32
+ L32 D
33
+ L33 M
34
+ L34 N
35
+ L35 W
36
+ L36 Y
37
+ L37 Q
38
+ L38 Q
39
+ L39 K
40
+ L40 P
41
+ L41 G
42
+ L42 E
43
+ L43 P
44
+ L44 P
45
+ L45 K
46
+ L46 F
47
+ L47 L
48
+ L48 I
49
+ L49 S
50
+ L50 E
51
+ L51 G
52
+ L52 N
53
+ L53 T
54
+ L54 L
55
+ L55 R
56
+ L56 P
57
+ L57 G
58
+ L58 V
59
+ L59 P
60
+ L60 S
61
+ L61 R
62
+ L62 F
63
+ L63 S
64
+ L64 S
65
+ L65 S
66
+ L66 G
67
+ L67 T
68
+ L68 G
69
+ L69 T
70
+ L70 D
71
+ L71 F
72
+ L72 V
73
+ L73 F
74
+ L74 T
75
+ L75 I
76
+ L76 E
77
+ L77 N
78
+ L78 T
79
+ L79 L
80
+ L80 S
81
+ L81 E
82
+ L82 D
83
+ L83 V
84
+ L84 G
85
+ L85 D
86
+ L86 Y
87
+ L87 Y
88
+ L88 C
89
+ L89 L
90
+ L90 Q
91
+ L91 S
92
+ L92 F
93
+ L93 N
94
+ L94 V
95
+ L95 P
96
+ L96 L
97
+ L97 T
98
+ L98 F
99
+ L99 G
100
+ L100 C
101
+ L101 G
102
+ L102 T
103
+ L103 K
104
+ L104 L
105
+ L105 E
106
+ L106 I
107
+ L107 K
sabdab_dataset/1i8k/annotation/1i8k_B_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 K
4
+ H4 L
5
+ H5 Q
6
+ H6 Q
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 K
14
+ H14 P
15
+ H15 G
16
+ H16 A
17
+ H17 S
18
+ H18 L
19
+ H19 K
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 V
24
+ H24 T
25
+ H25 S
26
+ H26 G
27
+ H27 F
28
+ H28 T
29
+ H29 F
30
+ H30 R
31
+ H31 K
32
+ H32 F
33
+ H33 G
34
+ H34 M
35
+ H35 S
36
+ H36 W
37
+ H37 V
38
+ H38 R
39
+ H39 Q
40
+ H40 T
41
+ H41 S
42
+ H42 D
43
+ H43 K
44
+ H44 C
45
+ H45 L
46
+ H46 E
47
+ H47 W
48
+ H48 V
49
+ H49 A
50
+ H50 S
51
+ H51 I
52
+ H52 S
53
+ H52A T
54
+ H53 G
55
+ H54 G
56
+ H55 Y
57
+ H56 N
58
+ H57 T
59
+ H58 Y
60
+ H59 Y
61
+ H60 S
62
+ H61 D
63
+ H62 N
64
+ H63 V
65
+ H64 K
66
+ H65 G
67
+ H66 R
68
+ H67 F
69
+ H68 T
70
+ H69 I
71
+ H70 S
72
+ H71 R
73
+ H72 E
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 N
78
+ H77 T
79
+ H78 L
80
+ H79 Y
81
+ H80 L
82
+ H81 Q
83
+ H82 M
84
+ H82A S
85
+ H82B S
86
+ H82C L
87
+ H83 K
88
+ H84 S
89
+ H85 E
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 L
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 T
98
+ H94 R
99
+ H95 G
100
+ H96 Y
101
+ H97 S
102
+ H98 S
103
+ H99 T
104
+ H100 S
105
+ H100A Y
106
+ H100B A
107
+ H100C M
108
+ H101 D
109
+ H102 Y
110
+ H103 W
111
+ H104 G
112
+ H105 Q
113
+ H106 G
114
+ H107 T
115
+ H108 T
116
+ H109 V
117
+ H110 T
118
+ H111 V
119
+ H112 S
120
+ H113 G
sabdab_dataset/1i8k/imgt/1i8k_A_L.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGKJ5*01 IG IGKJ IGKJ5 IGKJ5 NA True
3
+ V Mus_musculus IGKV17-127*01 IG IGKV IGKV17 IGKV17-127 NA True
sabdab_dataset/1i8k/imgt/1i8k_B_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Mus_musculus IGHJ4*01 IG IGHJ IGHJ4 IGHJ4 NA True
3
+ V Mus_musculus IGHV5-6*03 IG IGHV IGHV5 IGHV5-6 NA True
sabdab_dataset/1i8k/sequence/1i8k_A_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1i8k_A|seqres|full
2
+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
3
+ >1i8k_A|seqres|region: L
4
+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
5
+ >1i8k_A|structure|full
6
+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEI-
sabdab_dataset/1i8k/sequence/1i8k_B_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1i8k_B|seqres|full
2
+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSGIEGR
3
+ >1i8k_B|seqres|region: H
4
+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSG----
5
+ >1i8k_B|structure|full
6
+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVS-----
sabdab_dataset/1i8k/sequence/1i8k_raw.pdb ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >1i8k_A|type: L
2
+ DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEIK
3
+ >1i8k_C|type: non-ab
4
+ EEKKGNYVVTDH
5
+ >1i8k_B|type: H
6
+ QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYYSDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVSGIEGR
sabdab_dataset/1i8k/structure/1i8k.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/1i8k/structure/chothia/1i8k.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2r9h/abangle/2r9h.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 2r9h E F 0 -61.02 73.96 117.87 117.50 81.52 16.34
3
+ 2r9h C D 0 -64.20 73.55 116.22 117.74 79.78 16.27
sabdab_dataset/2r9h/annotation/2r9h_C_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H2 V
2
+ H3 R
3
+ H4 L
4
+ H5 L
5
+ H6 E
6
+ H7 S
7
+ H8 G
8
+ H9 G
9
+ H10 G
10
+ H11 L
11
+ H12 V
12
+ H13 Q
13
+ H14 P
14
+ H15 G
15
+ H16 G
16
+ H17 S
17
+ H18 L
18
+ H19 K
19
+ H20 L
20
+ H21 S
21
+ H22 C
22
+ H23 A
23
+ H24 A
24
+ H25 S
25
+ H26 G
26
+ H27 F
27
+ H28 D
28
+ H29 Y
29
+ H30 S
30
+ H31 R
31
+ H32 Y
32
+ H33 W
33
+ H34 M
34
+ H35 S
35
+ H36 W
36
+ H37 V
37
+ H38 R
38
+ H39 Q
39
+ H40 A
40
+ H41 P
41
+ H42 G
42
+ H43 K
43
+ H44 G
44
+ H45 L
45
+ H46 K
46
+ H47 W
47
+ H48 I
48
+ H49 G
49
+ H50 E
50
+ H51 I
51
+ H52 N
52
+ H52A P
53
+ H53 V
54
+ H54 S
55
+ H55 S
56
+ H56 T
57
+ H57 I
58
+ H58 N
59
+ H59 Y
60
+ H60 T
61
+ H61 P
62
+ H62 S
63
+ H63 L
64
+ H64 K
65
+ H65 D
66
+ H66 K
67
+ H67 F
68
+ H68 I
69
+ H69 I
70
+ H70 S
71
+ H71 R
72
+ H72 D
73
+ H73 N
74
+ H74 A
75
+ H75 K
76
+ H76 D
77
+ H77 T
78
+ H78 L
79
+ H79 Y
80
+ H80 L
81
+ H81 Q
82
+ H82 I
83
+ H82A S
84
+ H82B K
85
+ H82C V
86
+ H83 R
87
+ H84 S
88
+ H85 E
89
+ H86 D
90
+ H87 T
91
+ H88 A
92
+ H89 L
93
+ H90 Y
94
+ H91 Y
95
+ H92 C
96
+ H93 A
97
+ H94 R
98
+ H95 L
99
+ H96 Y
100
+ H97 Y
101
+ H98 G
102
+ H99 Y
103
+ H100 G
104
+ H100A Y
105
+ H100B W
106
+ H100C Y
107
+ H100D F
108
+ H101 D
109
+ H102 V
110
+ H103 W
111
+ H104 G
112
+ H105 A
113
+ H106 G
114
+ H107 T
115
+ H108 T
116
+ H109 V
117
+ H110 T
118
+ H111 V
119
+ H112 S
120
+ H113 S
sabdab_dataset/2r9h/annotation/2r9h_D_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 A
10
+ L10 I
11
+ L11 M
12
+ L12 S
13
+ L13 A
14
+ L14 A
15
+ L15 P
16
+ L16 G
17
+ L17 D
18
+ L18 K
19
+ L19 V
20
+ L20 T
21
+ L21 M
22
+ L22 T
23
+ L23 C
24
+ L24 S
25
+ L25 A
26
+ L26 S
27
+ L27 S
28
+ L28 S
29
+ L29 V
30
+ L30 S
31
+ L32 Y
32
+ L33 I
33
+ L34 H
34
+ L35 W
35
+ L36 Y
36
+ L37 Q
37
+ L38 Q
38
+ L39 K
39
+ L40 S
40
+ L41 G
41
+ L42 T
42
+ L43 S
43
+ L44 P
44
+ L45 K
45
+ L46 R
46
+ L47 W
47
+ L48 I
48
+ L49 Y
49
+ L50 D
50
+ L51 T
51
+ L52 S
52
+ L53 K
53
+ L54 L
54
+ L55 T
55
+ L56 S
56
+ L57 G
57
+ L58 V
58
+ L59 P
59
+ L60 V
60
+ L61 R
61
+ L62 F
62
+ L63 S
63
+ L64 G
64
+ L65 S
65
+ L66 G
66
+ L67 S
67
+ L68 G
68
+ L69 T
69
+ L70 S
70
+ L71 Y
71
+ L72 S
72
+ L73 L
73
+ L74 T
74
+ L75 I
75
+ L76 N
76
+ L77 T
77
+ L78 M
78
+ L79 E
79
+ L80 A
80
+ L81 E
81
+ L82 D
82
+ L83 A
83
+ L84 A
84
+ L85 T
85
+ L86 Y
86
+ L87 Y
87
+ L88 C
88
+ L89 Q
89
+ L90 Q
90
+ L91 W
91
+ L92 S
92
+ L93 S
93
+ L94 H
94
+ L95 P
95
+ L96 Q
96
+ L97 T
97
+ L98 F
98
+ L99 G
99
+ L100 G
100
+ L101 G
101
+ L102 T
102
+ L103 K
103
+ L104 L
104
+ L105 E
105
+ L106 I
106
+ L106A L
107
+ L107 R
108
+ L108 A
109
+ L109 D
sabdab_dataset/2r9h/annotation/2r9h_E_VH.ann ADDED
@@ -0,0 +1,120 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H2 V
2
+ H3 R
3
+ H4 L
4
+ H5 L
5
+ H6 E
6
+ H7 S
7
+ H8 G
8
+ H9 G
9
+ H10 G
10
+ H11 L
11
+ H12 V
12
+ H13 Q
13
+ H14 P
14
+ H15 G
15
+ H16 G
16
+ H17 S
17
+ H18 L
18
+ H19 K
19
+ H20 L
20
+ H21 S
21
+ H22 C
22
+ H23 A
23
+ H24 A
24
+ H25 S
25
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26
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27
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28
+ H29 Y
29
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30
+ H31 R
31
+ H32 Y
32
+ H33 W
33
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34
+ H35 S
35
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36
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37
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38
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39
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40
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41
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42
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43
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44
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45
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46
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47
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48
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49
+ H50 E
50
+ H51 I
51
+ H52 N
52
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53
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54
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55
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56
+ H56 T
57
+ H57 I
58
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59
+ H59 Y
60
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61
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62
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63
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64
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65
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66
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67
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68
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69
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70
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71
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72
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73
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74
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75
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76
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77
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78
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79
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80
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81
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82
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83
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84
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85
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86
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87
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88
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89
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90
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91
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92
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93
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94
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95
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96
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97
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98
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99
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100
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101
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102
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103
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104
+ H100A Y
105
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106
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107
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108
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109
+ H102 V
110
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111
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112
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113
+ H106 G
114
+ H107 T
115
+ H108 T
116
+ H109 V
117
+ H110 T
118
+ H111 V
119
+ H112 S
120
+ H113 S
sabdab_dataset/2r9h/annotation/2r9h_F_VL.ann ADDED
@@ -0,0 +1,109 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ L1 D
2
+ L2 I
3
+ L3 V
4
+ L4 L
5
+ L5 T
6
+ L6 Q
7
+ L7 S
8
+ L8 P
9
+ L9 A
10
+ L10 I
11
+ L11 M
12
+ L12 S
13
+ L13 A
14
+ L14 A
15
+ L15 P
16
+ L16 G
17
+ L17 D
18
+ L18 K
19
+ L19 V
20
+ L20 T
21
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22
+ L22 T
23
+ L23 C
24
+ L24 S
25
+ L25 A
26
+ L26 S
27
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28
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29
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30
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31
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32
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33
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34
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35
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36
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37
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38
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39
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40
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41
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42
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43
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44
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45
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46
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47
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48
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49
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50
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51
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52
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53
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54
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55
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56
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57
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58
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59
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60
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61
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62
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63
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64
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65
+ L66 G
66
+ L67 S
67
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68
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69
+ L70 S
70
+ L71 Y
71
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72
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73
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74
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75
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76
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77
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78
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79
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80
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81
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82
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83
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84
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85
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86
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87
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88
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89
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90
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91
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92
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93
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94
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95
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96
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97
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98
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99
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100
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101
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102
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103
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104
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105
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106
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107
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108
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109
+ L109 D
sabdab_dataset/2r9h/imgt/2r9h_C_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGHG1*02 IG IGHC ? IGHG1 IGg False
3
+ J Mus_Musculus IGHJ1*01 IG IGHJ ? IGHJ1 NA False
4
+ V Mus_Musculus IGHV4-1*02 IG IGHV IGHV4 IGHV4-1 NA False
sabdab_dataset/2r9h/imgt/2r9h_D_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGKC*02 IG IGKC ? IGKC NA False
3
+ J Mus_Musculus IGKJ1*01 IG IGKJ ? IGKJ1 NA False
4
+ V Mus_Musculus IGKV4-59*01 IG IGKV IGKV4 IGKV4-59 NA False
sabdab_dataset/2r9h/imgt/2r9h_E_H.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGHG1*02 IG IGHC ? IGHG1 IGg False
3
+ J Mus_Musculus IGHJ1*01 IG IGHJ ? IGHJ1 NA False
4
+ V Mus_Musculus IGHV4-1*02 IG IGHV IGHV4 IGHV4-1 NA False
sabdab_dataset/2r9h/imgt/2r9h_F_L.ann ADDED
@@ -0,0 +1,4 @@
 
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ C Mus_Musculus IGKC*02 IG IGKC ? IGKC NA False
3
+ J Mus_Musculus IGKJ1*01 IG IGKJ ? IGKJ1 NA False
4
+ V Mus_Musculus IGKV4-59*01 IG IGKV IGKV4 IGKV4-59 NA False
sabdab_dataset/2r9h/sequence/2r9h_C_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2r9h_C|seqres|full
2
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
3
+ >2r9h_C|seqres|region: H
4
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSS-----------------------------------------------------------------------------------------------------
5
+ >2r9h_C|structure|full
6
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
sabdab_dataset/2r9h/sequence/2r9h_D_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2r9h_D|seqres|full
2
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
3
+ >2r9h_D|seqres|region: L
4
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRAD------------------------------------------------------------------------------------------------------
5
+ >2r9h_D|structure|full
6
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
sabdab_dataset/2r9h/sequence/2r9h_E_VH.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2r9h_E|seqres|full
2
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
3
+ >2r9h_E|seqres|region: H
4
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSS-----------------------------------------------------------------------------------------------------
5
+ >2r9h_E|structure|full
6
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
sabdab_dataset/2r9h/sequence/2r9h_F_VL.fa ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ >2r9h_F|seqres|full
2
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
3
+ >2r9h_F|seqres|region: L
4
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRAD------------------------------------------------------------------------------------------------------
5
+ >2r9h_F|structure|full
6
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
sabdab_dataset/2r9h/sequence/2r9h_raw.pdb ADDED
@@ -0,0 +1,12 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >2r9h_A|type: non-ab
2
+ RRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPCFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQ
3
+ >2r9h_C|type: H
4
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
5
+ >2r9h_B|type: non-ab
6
+ RRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPCFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQ
7
+ >2r9h_E|type: H
8
+ VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYTPSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAALYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA
9
+ >2r9h_D|type: L
10
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
11
+ >2r9h_F|type: L
12
+ DIVLTQSPAIMSAAPGDKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSKLTSGVPVRFSGSGSGTSYSLTINTMEAEDAATYYCQQWSSHPQTFGGGTKLEILRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA
sabdab_dataset/2r9h/structure/2r9h.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2r9h/structure/chothia/2r9h.pdb ADDED
The diff for this file is too large to render. See raw diff
 
sabdab_dataset/2x1p/annotation/2x1p_A_VH.ann ADDED
@@ -0,0 +1,127 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 Q
14
+ H14 A
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 L
19
+ H19 R
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 R
28
+ H28 T
29
+ H29 F
30
+ H30 T
31
+ H31 S
32
+ H32 F
33
+ H33 A
34
+ H34 M
35
+ H35 G
36
+ H36 W
37
+ H37 F
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 E
45
+ H45 R
46
+ H46 E
47
+ H47 F
48
+ H48 V
49
+ H49 A
50
+ H50 S
51
+ H51 I
52
+ H52 S
53
+ H52A R
54
+ H53 S
55
+ H54 G
56
+ H55 T
57
+ H56 L
58
+ H57 T
59
+ H58 R
60
+ H59 Y
61
+ H60 A
62
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63
+ H62 S
64
+ H63 A
65
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66
+ H65 G
67
+ H66 R
68
+ H67 F
69
+ H68 T
70
+ H69 I
71
+ H70 S
72
+ H71 V
73
+ H72 D
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 N
78
+ H77 T
79
+ H78 V
80
+ H79 S
81
+ H80 L
82
+ H81 Q
83
+ H82 M
84
+ H82A D
85
+ H82B N
86
+ H82C L
87
+ H83 N
88
+ H84 P
89
+ H85 D
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
+ H94 A
99
+ H95 D
100
+ H96 L
101
+ H97 H
102
+ H98 R
103
+ H99 P
104
+ H100 Y
105
+ H100A G
106
+ H100B P
107
+ H100C G
108
+ H100D T
109
+ H100E Q
110
+ H100F R
111
+ H100G S
112
+ H100H D
113
+ H100I E
114
+ H100J Y
115
+ H101 D
116
+ H102 S
117
+ H103 W
118
+ H104 G
119
+ H105 Q
120
+ H106 G
121
+ H107 T
122
+ H108 Q
123
+ H109 V
124
+ H110 T
125
+ H111 V
126
+ H112 S
127
+ H113 S
sabdab_dataset/2x1p/annotation/2x1p_C_VH.ann ADDED
@@ -0,0 +1,127 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
+ H3 Q
4
+ H4 L
5
+ H5 Q
6
+ H6 E
7
+ H7 S
8
+ H8 G
9
+ H9 G
10
+ H10 G
11
+ H11 L
12
+ H12 V
13
+ H13 Q
14
+ H14 A
15
+ H15 G
16
+ H16 G
17
+ H17 S
18
+ H18 L
19
+ H19 R
20
+ H20 L
21
+ H21 S
22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
+ H27 R
28
+ H28 T
29
+ H29 F
30
+ H30 T
31
+ H31 S
32
+ H32 F
33
+ H33 A
34
+ H34 M
35
+ H35 G
36
+ H36 W
37
+ H37 F
38
+ H38 R
39
+ H39 Q
40
+ H40 A
41
+ H41 P
42
+ H42 G
43
+ H43 K
44
+ H44 E
45
+ H45 R
46
+ H46 E
47
+ H47 F
48
+ H48 V
49
+ H49 A
50
+ H50 S
51
+ H51 I
52
+ H52 S
53
+ H52A R
54
+ H53 S
55
+ H54 G
56
+ H55 T
57
+ H56 L
58
+ H57 T
59
+ H58 R
60
+ H59 Y
61
+ H60 A
62
+ H61 D
63
+ H62 S
64
+ H63 A
65
+ H64 K
66
+ H65 G
67
+ H66 R
68
+ H67 F
69
+ H68 T
70
+ H69 I
71
+ H70 S
72
+ H71 V
73
+ H72 D
74
+ H73 N
75
+ H74 A
76
+ H75 K
77
+ H76 N
78
+ H77 T
79
+ H78 V
80
+ H79 S
81
+ H80 L
82
+ H81 Q
83
+ H82 M
84
+ H82A D
85
+ H82B N
86
+ H82C L
87
+ H83 N
88
+ H84 P
89
+ H85 D
90
+ H86 D
91
+ H87 T
92
+ H88 A
93
+ H89 V
94
+ H90 Y
95
+ H91 Y
96
+ H92 C
97
+ H93 A
98
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99
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100
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101
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102
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103
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104
+ H100 Y
105
+ H100A G
106
+ H100B P
107
+ H100C G
108
+ H100D T
109
+ H100E Q
110
+ H100F R
111
+ H100G S
112
+ H100H D
113
+ H100I E
114
+ H100J Y
115
+ H101 D
116
+ H102 S
117
+ H103 W
118
+ H104 G
119
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120
+ H106 G
121
+ H107 T
122
+ H108 Q
123
+ H109 V
124
+ H110 T
125
+ H111 V
126
+ H112 S
127
+ H113 S
sabdab_dataset/2x1p/annotation/2x1p_D_VH.ann ADDED
@@ -0,0 +1,127 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 Q
2
+ H2 V
3
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4
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5
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6
+ H6 E
7
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8
+ H8 G
9
+ H9 G
10
+ H10 G
11
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12
+ H12 V
13
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14
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15
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16
+ H16 G
17
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18
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19
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20
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21
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22
+ H22 C
23
+ H23 A
24
+ H24 A
25
+ H25 S
26
+ H26 G
27
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28
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29
+ H29 F
30
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31
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32
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33
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34
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35
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36
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37
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38
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39
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40
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41
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42
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43
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44
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45
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46
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47
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48
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49
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50
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51
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52
+ H52 S
53
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54
+ H53 S
55
+ H54 G
56
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57
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58
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59
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60
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61
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62
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63
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64
+ H63 A
65
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66
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67
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68
+ H67 F
69
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70
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71
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72
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73
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74
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75
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76
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77
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78
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79
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80
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81
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82
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83
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84
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85
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86
+ H82C L
87
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88
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89
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90
+ H86 D
91
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92
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93
+ H89 V
94
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95
+ H91 Y
96
+ H92 C
97
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98
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99
+ H95 D
100
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101
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102
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103
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104
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105
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106
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107
+ H100C G
108
+ H100D T
109
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110
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111
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112
+ H100H D
113
+ H100I E
114
+ H100J Y
115
+ H101 D
116
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117
+ H103 W
118
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119
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120
+ H106 G
121
+ H107 T
122
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123
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124
+ H110 T
125
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126
+ H112 S
127
+ H113 S
sabdab_dataset/2x1p/imgt/2x1p_A_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Lamgla IGHJ4*01 IG IGHJ ? IGHJ4 NA False
3
+ V Lamgla IGHV1S4*01 IG IGHV IGHV1 IGHV1S4 NA False
sabdab_dataset/2x1p/imgt/2x1p_C_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Lamgla IGHJ4*01 IG IGHJ ? IGHJ4 NA False
3
+ V Lamgla IGHV1S4*01 IG IGHV IGHV1 IGHV1S4 NA False
sabdab_dataset/2x1p/imgt/2x1p_D_H.ann ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ gene_type species allele receptor_type group subgroup gene isotype parsed_from_imgt
2
+ J Lamgla IGHJ4*01 IG IGHJ ? IGHJ4 NA False
3
+ V Lamgla IGHV1S4*01 IG IGHV IGHV1 IGHV1S4 NA False
sabdab_dataset/2znw/abangle/2znw.abangle ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ pdb Hchain Lchain model HL HC1 HC2 LC1 LC2 dc
2
+ 2znw A a 0 -60.14 74.15 120.16 119.64 84.54 16.29
3
+ 2znw B b 0 -63.21 72.44 118.41 119.94 82.24 16.38
sabdab_dataset/2znw/annotation/2znw_A_VH.ann ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ H1 D
2
+ H2 I
3
+ H3 Q
4
+ H4 L
5
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6
+ H6 E
7
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8
+ H8 G
9
+ H9 P
10
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11
+ H11 L
12
+ H12 V
13
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14
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15
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16
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17
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18
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19
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20
+ H20 L
21
+ H21 T
22
+ H22 C
23
+ H23 S
24
+ H24 V
25
+ H25 T
26
+ H26 G
27
+ H27 D
28
+ H28 S
29
+ H29 I
30
+ H30 T
31
+ H31 S
32
+ H32 D
33
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34
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35
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36
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37
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38
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39
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40
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41
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42
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43
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44
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45
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46
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47
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48
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49
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50
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51
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52
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53
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54
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55
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56
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57
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58
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59
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60
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61
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62
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63
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64
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65
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66
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67
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68
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69
+ H69 I
70
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71
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72
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73
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74
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75
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76
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77
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78
+ H78 Y
79
+ H79 Y
80
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81
+ H81 D
82
+ H82 L
83
+ H82A N
84
+ H82B S
85
+ H82C V
86
+ H83 T
87
+ H84 T
88
+ H85 E
89
+ H86 D
90
+ H87 T
91
+ H88 A
92
+ H89 T
93
+ H90 Y
94
+ H91 Y
95
+ H92 C
96
+ H93 A
97
+ H94 N
98
+ H95 W
99
+ H96 D
100
+ H97 G
101
+ H101 D
102
+ H102 Y
103
+ H103 W
104
+ H104 G
105
+ H105 Q
106
+ H106 G
107
+ H107 T
108
+ H108 L
109
+ H109 V
110
+ H110 T
111
+ H111 V
112
+ H112 S
113
+ H113 A