File size: 3,953 Bytes
eb2c013
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
{
  "1": "Diffuse ground-glass opacities in both lungs",
  "finding_id": 0,
  "mask_stats": [
    {
      "z_span": [
        275,
        302
      ],
      "max_area_slice_index": 299,
      "bbox_xyxy": [
        168,
        290,
        202,
        321
      ],
      "max_area": 917,
      "total_voxels": 21814,
      "num_slices_with_mask": 28,
      "entity_index": 0,
      "entity_value": 1,
      "selected_slices": [
        82,
        97,
        112,
        127,
        142,
        162,
        172,
        187,
        203,
        218,
        233,
        248,
        263,
        278,
        299,
        308
      ],
      "hit_slices": [
        278,
        299
      ],
      "hit_slices_info": {
        "278": {
          "area": 634,
          "bbox_xyxy": [
            175,
            296,
            205,
            320
          ],
          "entity_value": 1,
          "used_fallback_union": false
        },
        "299": {
          "area": 917,
          "bbox_xyxy": [
            168,
            290,
            202,
            321
          ],
          "entity_value": 1,
          "used_fallback_union": false
        }
      },
      "is_hit": 1,
      "export_source_csv": "/home/deeplearning/data/data2/wzc/LLM4SAM/Final_data_process_pipeline/data/ct_data_ori_npy_multi_finding/retrieval_by_mask_results_train_even_spacing/report_multi_mask_even_spacing_maxE3_ratio0.9_smooth9_minGap1.csv"
    },
    {
      "z_span": [
        120,
        166
      ],
      "max_area_slice_index": 162,
      "bbox_xyxy": [
        330,
        197,
        425,
        288
      ],
      "max_area": 4105,
      "total_voxels": 114376,
      "num_slices_with_mask": 47,
      "entity_index": 1,
      "entity_value": 2,
      "selected_slices": [
        82,
        97,
        112,
        127,
        142,
        162,
        172,
        187,
        203,
        218,
        233,
        248,
        263,
        278,
        299,
        308
      ],
      "hit_slices": [
        127,
        142,
        162
      ],
      "hit_slices_info": {
        "127": {
          "area": 1461,
          "bbox_xyxy": [
            322,
            244,
            370,
            282
          ],
          "entity_value": 2,
          "used_fallback_union": false
        },
        "142": {
          "area": 1880,
          "bbox_xyxy": [
            326,
            237,
            375,
            284
          ],
          "entity_value": 2,
          "used_fallback_union": false
        },
        "162": {
          "area": 4105,
          "bbox_xyxy": [
            330,
            197,
            425,
            288
          ],
          "entity_value": 2,
          "used_fallback_union": false
        }
      },
      "is_hit": 1,
      "export_source_csv": "/home/deeplearning/data/data2/wzc/LLM4SAM/Final_data_process_pipeline/data/ct_data_ori_npy_multi_finding/retrieval_by_mask_results_train_even_spacing/report_multi_mask_even_spacing_maxE3_ratio0.9_smooth9_minGap1.csv"
    }
  ],
  "meta": {
    "case": "train_10994_a_2.nii.gz",
    "split": "train"
  },
  "accepted_seeds": [
    {
      "mask_idx": 1,
      "seed_slice": 162,
      "max_area": 4105.0,
      "replaced_slice": 157
    },
    {
      "mask_idx": 0,
      "seed_slice": 299,
      "max_area": 917.0,
      "replaced_slice": 293
    }
  ],
  "dropped_seeds": [],
  "export_summary": {
    "num_masks": 2,
    "hit_mask_count": 2,
    "is_hit_any": 1,
    "selected_slices": [
      82,
      97,
      112,
      127,
      142,
      162,
      172,
      187,
      203,
      218,
      233,
      248,
      263,
      278,
      299,
      308
    ],
    "export_source_csv": "/home/deeplearning/data/data2/wzc/LLM4SAM/Final_data_process_pipeline/data/ct_data_ori_npy_multi_finding/retrieval_by_mask_results_train_even_spacing/report_multi_mask_even_spacing_maxE3_ratio0.9_smooth9_minGap1.csv"
  }
}