thomasyu888 commited on
Commit
5c2759b
·
1 Parent(s): ad82678

Update testdataset.py

Browse files
Files changed (1) hide show
  1. testdataset.py +18 -11
testdataset.py CHANGED
@@ -67,6 +67,23 @@ class BigBioConfig(datasets.BuilderConfig):
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  subset_id: str = None
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  class TestDataset(datasets.GeneratorBasedBuilder):
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  """MedNLI"""
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@@ -92,16 +109,6 @@ class TestDataset(datasets.GeneratorBasedBuilder):
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  DEFAULT_CONFIG_NAME = "testdataset_source"
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- def _download_from_synapse(syn_id, path):
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- try:
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- import synapseclient
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- import synapseutils
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- except ModuleNotFoundError as e:
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- raise ModuleNotFoundError("synapseclient must be installed. pip install synapseclient")
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- syn = synapseclient.login()
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- synapseutils.syncFromSynapse(syn, syn_id, path=path)
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- # syn.get(entity=syn_id, downloadLocation=path)
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-
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  def _info(self) -> datasets.DatasetInfo:
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  features = datasets.Features(
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  {
@@ -124,7 +131,7 @@ class TestDataset(datasets.GeneratorBasedBuilder):
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  def _split_generators(self, dl_manager) -> List[datasets.SplitGenerator]:
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  # This is where we can call the custom download function for Synapse
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- data_dir = dl_manager.download_custom(_SYN_ID, self._download_from_synapse)
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  # data_dir = self.config.data_dir
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  if data_dir is None:
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  raise ValueError(
 
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  subset_id: str = None
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+ def download_from_synapse(syn_id, path):
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+ """Download files from a Synapse folder or project containing test, train, dev csv files
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+
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+ Args:
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+ syn_id: Synapse Id of a folder or project
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+ path: path to download files
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+ """
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+ try:
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+ import synapseclient
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+ import synapseutils
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+ except ModuleNotFoundError as e:
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+ raise ModuleNotFoundError("synapseclient must be installed. pip install synapseclient")
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+ syn = synapseclient.login()
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+ synapseutils.syncFromSynapse(syn, syn_id, path=path)
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+ # syn.get(entity=syn_id, downloadLocation=path)
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+
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+
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  class TestDataset(datasets.GeneratorBasedBuilder):
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  """MedNLI"""
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  DEFAULT_CONFIG_NAME = "testdataset_source"
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  def _info(self) -> datasets.DatasetInfo:
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  features = datasets.Features(
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  {
 
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  def _split_generators(self, dl_manager) -> List[datasets.SplitGenerator]:
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  # This is where we can call the custom download function for Synapse
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+ data_dir = dl_manager.download_custom(_SYN_ID, download_from_synapse)
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  # data_dir = self.config.data_dir
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  if data_dir is None:
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  raise ValueError(