Initial release: dependency-free reference implementation, conformance vectors, closed-form null model
5305b07 verified Download data/sequences.csv from SalutefaceAAC/synthidbio-sequence-pilot: direct link, hf CLI and curl.
- Browser
- Download file 2.96 kB
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https://huggingface.co/datasets/SalutefaceAAC/synthidbio-sequence-pilot/resolve/main/data/sequences.csv
- Command line
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hf download hf://datasets/SalutefaceAAC/synthidbio-sequence-pilot/data/sequences.csv
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curl -L -o sequences.csv https://huggingface.co/datasets/SalutefaceAAC/synthidbio-sequence-pilot/resolve/main/data/sequences.csv
2.96 kB
| record_id,backbone,arm,role,sample,length,windows,distinct_contexts,repeat_inflation_R,public_key_mean_g,null_se,null_z,null_threshold_p95,published_lab_key_mean_g,upstream_baseline_test_g,mpnn_score,mpnn_global_score,seq_recovery,sampling_temp,model_name,source_files,sequence | |
| 5L33-baseline-1,5L33,baseline,proteinmpnn_design,1,106,103,103,1.0,0.5036893203883496,0.009853293,0.3744,0.516207224,,0.5037,0.8581,0.8581,0.4151,0.1,v_48_020,5L33_baseline.fa,SIDEDTQKALDFVKALEEANPELMKKVITPDTEMEVNGKKYKGEEIVEFVKELAAKGVKYKLESYEKKGDKYVFTVTVSENGKTYTATITIKVEDGKVKEVKIEEK | |
| 5L33-baseline-2,5L33,baseline,proteinmpnn_design,2,106,103,103,1.0,0.5130097087378641,0.009853293,1.3203,0.516207224,,0.513,0.8258,0.8258,0.4623,0.1,v_48_020,5L33_baseline.fa,SIDEETKKALDFIKALEKADPELMAKVITEDTEMEVNGKKYKGKEIVDYVEKLKKEGVKYKLLEYRKEGNKYVFIVEKSENGVTKIITITIEVENGKVKKIVIEEK | |
| 5L33-native,5L33,native_reference,input_backbone,,106,103,103,1.0,0.4970873786407768,0.009853293,-0.2956,0.516207224,,,1.5969,1.5969,,,v_48_020,5L33_baseline.fa;5L33_watermarked.fa,HMPEEEKAARLFIEALEKGDPELMRKVISPDTRMEDNGREFTGDEVVEYVKEIQKRGEQWHLRRYTKEGNSWRFEVQVDNNGQTEQWEVQIEVRNGRIKRVTITHV | |
| 5L33-watermarked-1,5L33,watermarked,proteinmpnn_design,1,106,103,103,1.0,0.4998058252427189,0.009853293,-0.0197,0.516207224,0.8902,,1.1907,1.1907,0.3868,0.1,v_48_020,5L33_watermarked.fa,TIDDDTAIALKYVESLELADPALMSKVITPNTKMEYNGREFVGEEIVAYVEEVKKEGVKFELLDWERVGDEYKFTIRASKDGKTYTLELTIKVEDGKIKSVKIKKE | |
| 5L33-watermarked-2,5L33,watermarked,proteinmpnn_design,2,106,103,103,1.0,0.4955339805825244,0.009853293,-0.4533,0.516207224,0.4878,,1.2370,1.2370,0.4340,0.1,v_48_020,5L33_watermarked.fa,SMDPDTKRAHDFIDALELADPALMREVITPDTQMEYNGQRFVGEEIVEFVKQIAAEGRKYTLVSSKREGDKWLFDVEASQDGVTRREQVSVLVRDGKLERVEIRDE | |
| 6MRR-baseline-1,6MRR,baseline,proteinmpnn_design,1,68,65,65,1.0,0.5212307692307693,0.012403473,1.7117,0.520401898,,0.5212,1.0006,1.0006,0.4853,0.1,v_48_020,6MRR_baseline.fa,GVDPELEKVVKEINAFLKEQGITNVKIEVKDGTLTITVNGASEALKKFLEETKKRLEAKGYKVEVEIK | |
| 6MRR-baseline-2,6MRR,baseline,proteinmpnn_design,2,68,65,65,1.0,0.5255384615384616,0.012403473,2.059,0.520401898,,0.5255,1.0307,1.0307,0.5147,0.1,v_48_020,6MRR_baseline.fa,GSNAELDKVVEKLNAFLKEQGITNVEIKVEDGTLTIRMKGASEAVKEFLAKLKKELEAKGYTVNITIE | |
| 6MRR-native,6MRR,native_reference,input_backbone,,68,65,65,1.0,0.5144615384615384,0.012403473,1.1659,0.520401898,,,1.4467,1.4467,,,v_48_020,6MRR_baseline.fa;6MRR_watermarked.fa,GWSTELEKHREELKEFLKKEGITNVEIRIDNGRLEVRVEGGTERLKRFLEELRQKLEKKGYTVDIKIE | |
| 6MRR-watermarked-1,6MRR,watermarked,proteinmpnn_design,1,68,65,65,1.0,0.5027692307692309,0.012403473,0.2233,0.520401898,0.8636,,1.3214,1.3214,0.3971,0.1,v_48_020,6MRR_watermarked.fa,MLDPELQKVVEELNAFLQEKNVTNVKIEIKDGVLKIKTSGCTSDCRTFFSKLEKELKKKGYEVEIEIS | |
| 6MRR-watermarked-2,6MRR,watermarked,proteinmpnn_design,2,68,65,65,1.0,0.5107692307692306,0.012403473,0.8682,0.520401898,0.5227,,1.1926,1.1926,0.4412,0.1,v_48_020,6MRR_watermarked.fa,NVDAELMAAVKEIEAFLKEQGIDNVEIEVKDGTLSIKMEGASEATKQHLEQLKKRLEAKGYRVDIEIL | |