SMART Protocols Ontology: Workflow Module (SP-Workflow) ======================================================================================================================== Overview -------- SP-Workflow module represents: i) the executable elements of a protocol; ii) the experimental actions and material entities that participates in instructions (sample/specimen, organisms, reagents, instruments); and iii) the order of execution of the instructions. :Domain: Scholarly Knowledge :Category: Workflows :Current Version: 4.0 :Last Updated: 2013-07-01 :Creator: http://oxgiraldo.wordpress.com :License: Creative Commons Attribution 4.0 International (CC BY 4.0) :Format: OWL :Download: `SMART Protocols Ontology: Workflow Module (SP-Workflow) Homepage `_ Graph Metrics ------------- - **Total Nodes**: 1446 - **Total Edges**: 3017 - **Root Nodes**: 4 - **Leaf Nodes**: 834 Knowledge coverage ------------------ - Classes: 419 - Individuals: 5 - Properties: 17 Hierarchical metrics -------------------- - **Maximum Depth**: 13 - **Minimum Depth**: 0 - **Average Depth**: 7.23 - **Depth Variance**: 8.19 Breadth metrics ------------------ - **Maximum Breadth**: 36 - **Minimum Breadth**: 3 - **Average Breadth**: 14.07 - **Breadth Variance**: 120.78 Dataset Statistics ------------------ Generated Benchmarks: - **Term Types**: 5 - **Taxonomic Relations**: 577 - **Non-taxonomic Relations**: 22 - **Average Terms per Type**: 1.00 Usage Example ------------- .. code-block:: python from ontolearner.ontology import SPWorkflow # Initialize and load ontology ontology = SPWorkflow() ontology.load("path/to/ontology.OWL") # Extract datasets data = ontology.extract() # Access specific relations term_types = data.term_typings taxonomic_relations = data.type_taxonomies non_taxonomic_relations = data.type_non_taxonomic_relations