Upload folder using huggingface_hub
Browse files- env_snapshots/esen_env.yml +146 -0
- env_snapshots/esen_pip_freeze.txt +110 -0
- env_snapshots/grace_env.yml +112 -0
- env_snapshots/grace_pip_freeze.txt +77 -0
- env_snapshots/mbd_env.yml +265 -0
- env_snapshots/mbd_pip_freeze.txt +229 -0
- env_snapshots/nequip_env.yml +113 -0
- env_snapshots/nequip_pip_freeze.txt +55 -0
- env_snapshots/tace2_env.yml +137 -0
- env_snapshots/tace2_pip_freeze.txt +73 -0
env_snapshots/esen_env.yml
ADDED
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@@ -0,0 +1,146 @@
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| 1 |
+
name: esen
|
| 2 |
+
channels:
|
| 3 |
+
- defaults
|
| 4 |
+
dependencies:
|
| 5 |
+
- _libgcc_mutex=0.1=main
|
| 6 |
+
- _openmp_mutex=5.1=52_gnu
|
| 7 |
+
- bzip2=1.0.8=h5eee18b_6
|
| 8 |
+
- ca-certificates=2026.7.16=h06a4308_0
|
| 9 |
+
- ld_impl_linux-64=2.44=h9e0c5a2_3
|
| 10 |
+
- libexpat=2.8.2=h7354ed3_1
|
| 11 |
+
- libffi=3.4.8=h06d3fd0_3
|
| 12 |
+
- libgcc=15.2.0=h69a1729_8
|
| 13 |
+
- libgcc-ng=15.2.0=h166f726_8
|
| 14 |
+
- libnsl=2.0.0=h5eee18b_0
|
| 15 |
+
- libstdcxx=15.2.0=h39759b7_8
|
| 16 |
+
- libuuid=1.41.5=h5eee18b_0
|
| 17 |
+
- libxcb=1.17.0=h9b100fa_0
|
| 18 |
+
- libzlib=1.3.2=h47b2149_0
|
| 19 |
+
- ncurses=6.5=h7934f7d_0
|
| 20 |
+
- openssl=3.5.7=h1b28b03_0
|
| 21 |
+
- packaging=26.1=py311h06a4308_0
|
| 22 |
+
- pip=26.1.2=pyhc872135_0
|
| 23 |
+
- pthread-stubs=0.3=h47b2149_2
|
| 24 |
+
- python=3.11.15=h17756b0_1
|
| 25 |
+
- readline=8.3=hc2a1206_0
|
| 26 |
+
- setuptools=83.0.0=py311h06a4308_0
|
| 27 |
+
- sqlite=3.53.2=h795bf6d_0
|
| 28 |
+
- tk=8.6.15=h54e0aa7_0
|
| 29 |
+
- tzdata=2026c=he532380_0
|
| 30 |
+
- wheel=0.47.0=py311h06a4308_0
|
| 31 |
+
- xorg-libx11=1.8.12=h9b100fa_1
|
| 32 |
+
- xorg-libxau=1.0.12=h9b100fa_0
|
| 33 |
+
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
| 34 |
+
- xorg-xorgproto=2024.1=h47b2149_2
|
| 35 |
+
- xz=5.8.2=h448239c_0
|
| 36 |
+
- zlib=1.3.2=h47b2149_0
|
| 37 |
+
- pip:
|
| 38 |
+
- absl-py==2.5.0
|
| 39 |
+
- aiohappyeyeballs==2.7.1
|
| 40 |
+
- aiohttp==3.14.3
|
| 41 |
+
- aiosignal==1.4.0
|
| 42 |
+
- annotated-types==0.8.0
|
| 43 |
+
- antlr4-python3-runtime==4.9.3
|
| 44 |
+
- anyio==4.14.2
|
| 45 |
+
- ase==3.29.0
|
| 46 |
+
- attrs==26.1.0
|
| 47 |
+
- bibtexparser==1.4.4
|
| 48 |
+
- catbench==1.1.3
|
| 49 |
+
- certifi==2026.7.22
|
| 50 |
+
- charset-normalizer==3.4.9
|
| 51 |
+
- click==8.4.2
|
| 52 |
+
- cloudpickle==3.1.2
|
| 53 |
+
- contourpy==1.3.3
|
| 54 |
+
- cycler==0.12.1
|
| 55 |
+
- e3nn==0.6.0
|
| 56 |
+
- fairchem-core==1.10.0
|
| 57 |
+
- filelock==3.32.2
|
| 58 |
+
- fonttools==4.63.0
|
| 59 |
+
- frozenlist==1.8.0
|
| 60 |
+
- fsspec==2026.7.0
|
| 61 |
+
- grpcio==1.83.0
|
| 62 |
+
- h11==0.16.0
|
| 63 |
+
- hf-xet==1.6.0
|
| 64 |
+
- httpcore==1.0.9
|
| 65 |
+
- httpx==0.28.1
|
| 66 |
+
- huggingface-hub==1.27.0
|
| 67 |
+
- hydra-core==1.3.5
|
| 68 |
+
- idna==3.18
|
| 69 |
+
- jinja2==3.1.6
|
| 70 |
+
- joblib==1.5.3
|
| 71 |
+
- kiwisolver==1.5.0
|
| 72 |
+
- llvmlite==0.48.0
|
| 73 |
+
- lmdb==2.3.0
|
| 74 |
+
- lxml==6.1.1
|
| 75 |
+
- markdown==3.10.3
|
| 76 |
+
- markupsafe==3.0.3
|
| 77 |
+
- matplotlib==3.11.1
|
| 78 |
+
- monty==2026.7.16
|
| 79 |
+
- mpmath==1.3.0
|
| 80 |
+
- multidict==6.7.1
|
| 81 |
+
- mypy-extensions==1.1.0
|
| 82 |
+
- narwhals==2.24.0
|
| 83 |
+
- networkx==3.6.1
|
| 84 |
+
- numba==0.66.0
|
| 85 |
+
- numpy==1.26.4
|
| 86 |
+
- nvidia-cublas-cu12==12.1.3.1
|
| 87 |
+
- nvidia-cuda-cupti-cu12==12.1.105
|
| 88 |
+
- nvidia-cuda-nvrtc-cu12==12.1.105
|
| 89 |
+
- nvidia-cuda-runtime-cu12==12.1.105
|
| 90 |
+
- nvidia-cudnn-cu12==9.1.0.70
|
| 91 |
+
- nvidia-cufft-cu12==11.0.2.54
|
| 92 |
+
- nvidia-curand-cu12==10.3.2.106
|
| 93 |
+
- nvidia-cusolver-cu12==11.4.5.107
|
| 94 |
+
- nvidia-cusparse-cu12==12.1.0.106
|
| 95 |
+
- nvidia-nccl-cu12==2.20.5
|
| 96 |
+
- nvidia-nvjitlink-cu12==12.9.86
|
| 97 |
+
- nvidia-nvtx-cu12==12.1.105
|
| 98 |
+
- omegaconf==2.3.1
|
| 99 |
+
- opt-einsum==3.4.0
|
| 100 |
+
- opt-einsum-fx==0.1.4
|
| 101 |
+
- orjson==3.11.9
|
| 102 |
+
- palettable==3.3.3
|
| 103 |
+
- pandas==3.0.5
|
| 104 |
+
- pillow==12.3.0
|
| 105 |
+
- platformdirs==4.11.1
|
| 106 |
+
- plotly==6.9.0
|
| 107 |
+
- propcache==0.5.2
|
| 108 |
+
- protobuf==7.35.1
|
| 109 |
+
- psutil==7.2.2
|
| 110 |
+
- pydantic==2.13.4
|
| 111 |
+
- pydantic-core==2.46.4
|
| 112 |
+
- pymatgen==2026.5.4
|
| 113 |
+
- pymatgen-core==2026.7.31
|
| 114 |
+
- pyparsing==3.3.2
|
| 115 |
+
- pyre-extensions==0.0.32
|
| 116 |
+
- python-dateutil==2.9.0.post0
|
| 117 |
+
- pyyaml==6.0.3
|
| 118 |
+
- requests==2.34.2
|
| 119 |
+
- ruamel-yaml==0.19.1
|
| 120 |
+
- scipy==1.14.1
|
| 121 |
+
- sentry-sdk==2.66.1
|
| 122 |
+
- six==1.17.0
|
| 123 |
+
- spglib==2.7.0
|
| 124 |
+
- submitit==1.5.4
|
| 125 |
+
- sympy==1.14.0
|
| 126 |
+
- tabulate==0.10.0
|
| 127 |
+
- tensorboard==2.21.0
|
| 128 |
+
- tensorboard-data-server==0.7.2
|
| 129 |
+
- torch==2.4.1
|
| 130 |
+
- torch-geometric==2.8.0.post1
|
| 131 |
+
- torch-scatter==2.1.2+pt24cu121
|
| 132 |
+
- torch-sparse==0.6.18+pt24cu121
|
| 133 |
+
- torchtnt==0.2.4
|
| 134 |
+
- tqdm==4.70.0
|
| 135 |
+
- triton==3.0.0
|
| 136 |
+
- typing-extensions==4.16.0
|
| 137 |
+
- typing-inspect==0.9.0
|
| 138 |
+
- typing-inspection==0.4.2
|
| 139 |
+
- uncertainties==3.2.3
|
| 140 |
+
- urllib3==2.7.0
|
| 141 |
+
- wandb==0.28.1
|
| 142 |
+
- werkzeug==3.1.8
|
| 143 |
+
- xlsxwriter==3.2.9
|
| 144 |
+
- xxhash==3.8.1
|
| 145 |
+
- yarl==1.24.5
|
| 146 |
+
prefix: /home/ccel2026/miniconda3/envs/esen
|
env_snapshots/esen_pip_freeze.txt
ADDED
|
@@ -0,0 +1,110 @@
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|
| 1 |
+
absl-py==2.5.0
|
| 2 |
+
aiohappyeyeballs==2.7.1
|
| 3 |
+
aiohttp==3.14.3
|
| 4 |
+
aiosignal==1.4.0
|
| 5 |
+
annotated-types==0.8.0
|
| 6 |
+
antlr4-python3-runtime==4.9.3
|
| 7 |
+
anyio==4.14.2
|
| 8 |
+
ase==3.29.0
|
| 9 |
+
attrs==26.1.0
|
| 10 |
+
bibtexparser==1.4.4
|
| 11 |
+
cabarchive==0.2.5
|
| 12 |
+
catbench==1.1.3
|
| 13 |
+
certifi==2026.7.22
|
| 14 |
+
charset-normalizer==3.4.9
|
| 15 |
+
click==8.4.2
|
| 16 |
+
cloudpickle==3.1.2
|
| 17 |
+
contourpy==1.3.3
|
| 18 |
+
cycler==0.12.1
|
| 19 |
+
e3nn==0.6.0
|
| 20 |
+
fairchem-core==1.10.0
|
| 21 |
+
filelock==3.32.2
|
| 22 |
+
fonttools==4.63.0
|
| 23 |
+
frozenlist==1.8.0
|
| 24 |
+
fsspec==2026.7.0
|
| 25 |
+
grpcio==1.83.0
|
| 26 |
+
h11==0.16.0
|
| 27 |
+
hf-xet==1.6.0
|
| 28 |
+
httpcore==1.0.9
|
| 29 |
+
httpx==0.28.1
|
| 30 |
+
huggingface_hub==1.27.0
|
| 31 |
+
hydra-core==1.3.5
|
| 32 |
+
idna==3.18
|
| 33 |
+
Jinja2==3.1.6
|
| 34 |
+
joblib==1.5.3
|
| 35 |
+
kiwisolver==1.5.0
|
| 36 |
+
llvmlite==0.48.0
|
| 37 |
+
lmdb==2.3.0
|
| 38 |
+
lxml==6.1.1
|
| 39 |
+
Markdown==3.10.3
|
| 40 |
+
MarkupSafe==3.0.3
|
| 41 |
+
matplotlib==3.11.1
|
| 42 |
+
monty==2026.7.16
|
| 43 |
+
mpmath==1.3.0
|
| 44 |
+
multidict==6.7.1
|
| 45 |
+
mypy_extensions==1.1.0
|
| 46 |
+
narwhals==2.24.0
|
| 47 |
+
networkx==3.6.1
|
| 48 |
+
numba==0.66.0
|
| 49 |
+
numpy==1.26.4
|
| 50 |
+
nvidia-cublas-cu12==12.1.3.1
|
| 51 |
+
nvidia-cuda-cupti-cu12==12.1.105
|
| 52 |
+
nvidia-cuda-nvrtc-cu12==12.1.105
|
| 53 |
+
nvidia-cuda-runtime-cu12==12.1.105
|
| 54 |
+
nvidia-cudnn-cu12==9.1.0.70
|
| 55 |
+
nvidia-cufft-cu12==11.0.2.54
|
| 56 |
+
nvidia-curand-cu12==10.3.2.106
|
| 57 |
+
nvidia-cusolver-cu12==11.4.5.107
|
| 58 |
+
nvidia-cusparse-cu12==12.1.0.106
|
| 59 |
+
nvidia-nccl-cu12==2.20.5
|
| 60 |
+
nvidia-nvjitlink-cu12==12.9.86
|
| 61 |
+
nvidia-nvtx-cu12==12.1.105
|
| 62 |
+
omegaconf==2.3.1
|
| 63 |
+
opt-einsum-fx==0.1.4
|
| 64 |
+
opt_einsum==3.4.0
|
| 65 |
+
orjson==3.11.9
|
| 66 |
+
packaging==26.1
|
| 67 |
+
palettable==3.3.3
|
| 68 |
+
pandas==3.0.5
|
| 69 |
+
pillow==12.3.0
|
| 70 |
+
platformdirs==4.11.1
|
| 71 |
+
plotly==6.9.0
|
| 72 |
+
propcache==0.5.2
|
| 73 |
+
protobuf==7.35.1
|
| 74 |
+
psutil==7.2.2
|
| 75 |
+
pydantic==2.13.4
|
| 76 |
+
pydantic_core==2.46.4
|
| 77 |
+
pymatgen==2026.5.4
|
| 78 |
+
pymatgen-core==2026.7.31
|
| 79 |
+
pyparsing==3.3.2
|
| 80 |
+
pyre-extensions==0.0.32
|
| 81 |
+
python-dateutil==2.9.0.post0
|
| 82 |
+
PyYAML==6.0.3
|
| 83 |
+
requests==2.34.2
|
| 84 |
+
ruamel.yaml==0.19.1
|
| 85 |
+
scipy==1.14.1
|
| 86 |
+
sentry-sdk==2.66.1
|
| 87 |
+
six==1.17.0
|
| 88 |
+
spglib==2.7.0
|
| 89 |
+
submitit==1.5.4
|
| 90 |
+
sympy==1.14.0
|
| 91 |
+
tabulate==0.10.0
|
| 92 |
+
tensorboard==2.21.0
|
| 93 |
+
tensorboard-data-server==0.7.2
|
| 94 |
+
torch==2.4.1
|
| 95 |
+
torch-geometric==2.8.0.post1
|
| 96 |
+
torch_scatter==2.1.2+pt24cu121
|
| 97 |
+
torch_sparse==0.6.18+pt24cu121
|
| 98 |
+
torchtnt==0.2.4
|
| 99 |
+
tqdm==4.70.0
|
| 100 |
+
triton==3.0.0
|
| 101 |
+
typing-inspect==0.9.0
|
| 102 |
+
typing-inspection==0.4.2
|
| 103 |
+
typing_extensions==4.16.0
|
| 104 |
+
uncertainties==3.2.3
|
| 105 |
+
urllib3==2.7.0
|
| 106 |
+
wandb==0.28.1
|
| 107 |
+
Werkzeug==3.1.8
|
| 108 |
+
xlsxwriter==3.2.9
|
| 109 |
+
xxhash==3.8.1
|
| 110 |
+
yarl==1.24.5
|
env_snapshots/grace_env.yml
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
name: grace
|
| 2 |
+
channels:
|
| 3 |
+
- defaults
|
| 4 |
+
dependencies:
|
| 5 |
+
- _libgcc_mutex=0.1=main
|
| 6 |
+
- _openmp_mutex=5.1=52_gnu
|
| 7 |
+
- bzip2=1.0.8=h5eee18b_6
|
| 8 |
+
- ca-certificates=2026.5.14=h06a4308_0
|
| 9 |
+
- ld_impl_linux-64=2.44=h9e0c5a2_3
|
| 10 |
+
- libexpat=2.8.2=h7354ed3_1
|
| 11 |
+
- libffi=3.4.8=h06d3fd0_3
|
| 12 |
+
- libgcc=15.2.0=h69a1729_8
|
| 13 |
+
- libgcc-ng=15.2.0=h166f726_8
|
| 14 |
+
- libnsl=2.0.0=h5eee18b_0
|
| 15 |
+
- libstdcxx=15.2.0=h39759b7_8
|
| 16 |
+
- libuuid=1.41.5=h5eee18b_0
|
| 17 |
+
- libxcb=1.17.0=h9b100fa_0
|
| 18 |
+
- libzlib=1.3.2=h47b2149_0
|
| 19 |
+
- ncurses=6.5=h7934f7d_0
|
| 20 |
+
- openssl=3.5.7=h1b28b03_0
|
| 21 |
+
- packaging=26.0=py311h06a4308_0
|
| 22 |
+
- pip=26.1.2=pyhc872135_0
|
| 23 |
+
- pthread-stubs=0.3=h0ce48e5_1
|
| 24 |
+
- python=3.11.15=h17756b0_1
|
| 25 |
+
- readline=8.3=hc2a1206_0
|
| 26 |
+
- setuptools=82.0.1=py311h06a4308_0
|
| 27 |
+
- sqlite=3.53.2=h795bf6d_0
|
| 28 |
+
- tk=8.6.15=h54e0aa7_0
|
| 29 |
+
- wheel=0.47.0=py311h06a4308_0
|
| 30 |
+
- xorg-libx11=1.8.12=h9b100fa_1
|
| 31 |
+
- xorg-libxau=1.0.12=h9b100fa_0
|
| 32 |
+
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
| 33 |
+
- xorg-xorgproto=2024.1=h47b2149_2
|
| 34 |
+
- xz=5.8.2=h448239c_0
|
| 35 |
+
- zlib=1.3.2=h47b2149_0
|
| 36 |
+
- pip:
|
| 37 |
+
- absl-py==2.5.0
|
| 38 |
+
- ase==3.29.0
|
| 39 |
+
- astunparse==1.6.3
|
| 40 |
+
- catbench==1.1.3
|
| 41 |
+
- certifi==2026.6.17
|
| 42 |
+
- charset-normalizer==3.4.9
|
| 43 |
+
- contourpy==1.3.3
|
| 44 |
+
- cycler==0.12.1
|
| 45 |
+
- flatbuffers==25.12.19
|
| 46 |
+
- fonttools==4.63.0
|
| 47 |
+
- gast==0.7.0
|
| 48 |
+
- google-pasta==0.2.0
|
| 49 |
+
- grpcio==1.82.1
|
| 50 |
+
- h5py==3.16.0
|
| 51 |
+
- idna==3.18
|
| 52 |
+
- joblib==1.5.3
|
| 53 |
+
- keras==3.15.0
|
| 54 |
+
- kiwisolver==1.5.0
|
| 55 |
+
- libclang==18.1.1
|
| 56 |
+
- markdown==3.10.2
|
| 57 |
+
- markdown-it-py==4.2.0
|
| 58 |
+
- markupsafe==3.0.3
|
| 59 |
+
- matplotlib==3.11.0
|
| 60 |
+
- matscipy==1.2.0
|
| 61 |
+
- mdurl==0.1.2
|
| 62 |
+
- ml-dtypes==0.5.4
|
| 63 |
+
- mpmath==1.3.0
|
| 64 |
+
- namex==0.1.0
|
| 65 |
+
- narwhals==2.23.0
|
| 66 |
+
- numpy==2.4.6
|
| 67 |
+
- nvidia-cublas-cu12==12.9.2.10
|
| 68 |
+
- nvidia-cuda-cupti-cu12==12.9.79
|
| 69 |
+
- nvidia-cuda-nvcc-cu12==12.9.86
|
| 70 |
+
- nvidia-cuda-nvrtc-cu12==12.9.86
|
| 71 |
+
- nvidia-cuda-runtime-cu12==12.9.79
|
| 72 |
+
- nvidia-cudnn-cu12==9.24.0.43
|
| 73 |
+
- nvidia-cufft-cu12==11.4.1.4
|
| 74 |
+
- nvidia-curand-cu12==10.3.10.19
|
| 75 |
+
- nvidia-cusolver-cu12==11.7.5.82
|
| 76 |
+
- nvidia-cusparse-cu12==12.5.10.65
|
| 77 |
+
- nvidia-nccl-cu12==2.30.7
|
| 78 |
+
- nvidia-nvjitlink-cu12==12.9.86
|
| 79 |
+
- opt-einsum==3.4.0
|
| 80 |
+
- optree==0.19.1
|
| 81 |
+
- pandas==2.3.3
|
| 82 |
+
- pillow==12.3.0
|
| 83 |
+
- prompt-toolkit==3.0.52
|
| 84 |
+
- protobuf==7.35.1
|
| 85 |
+
- pygments==2.20.0
|
| 86 |
+
- pyparsing==3.3.2
|
| 87 |
+
- python-dateutil==2.9.0.post0
|
| 88 |
+
- pytz==2026.2
|
| 89 |
+
- pyyaml==6.0.3
|
| 90 |
+
- questionary==2.1.1
|
| 91 |
+
- requests==2.34.2
|
| 92 |
+
- rich==15.0.0
|
| 93 |
+
- scikit-learn==1.9.0
|
| 94 |
+
- scipy==1.17.1
|
| 95 |
+
- six==1.17.0
|
| 96 |
+
- sympy==1.14.0
|
| 97 |
+
- tensorboard==2.20.0
|
| 98 |
+
- tensorboard-data-server==0.7.2
|
| 99 |
+
- tensorflow==2.20.0
|
| 100 |
+
- tensorpotential==0.6.0
|
| 101 |
+
- termcolor==3.3.0
|
| 102 |
+
- tf-keras==2.20.1
|
| 103 |
+
- threadpoolctl==3.6.0
|
| 104 |
+
- tqdm==4.68.4
|
| 105 |
+
- typing-extensions==4.16.0
|
| 106 |
+
- tzdata==2026.2
|
| 107 |
+
- urllib3==2.7.0
|
| 108 |
+
- wcwidth==0.8.2
|
| 109 |
+
- werkzeug==3.1.8
|
| 110 |
+
- wrapt==2.2.2
|
| 111 |
+
- xlsxwriter==3.2.9
|
| 112 |
+
prefix: /home/ccel2026/miniconda3/envs/grace
|
env_snapshots/grace_pip_freeze.txt
ADDED
|
@@ -0,0 +1,77 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
absl-py==2.5.0
|
| 2 |
+
ase==3.29.0
|
| 3 |
+
astunparse==1.6.3
|
| 4 |
+
cabarchive==0.2.5
|
| 5 |
+
catbench==1.1.3
|
| 6 |
+
certifi==2026.6.17
|
| 7 |
+
charset-normalizer==3.4.9
|
| 8 |
+
contourpy==1.3.3
|
| 9 |
+
cycler==0.12.1
|
| 10 |
+
flatbuffers==25.12.19
|
| 11 |
+
fonttools==4.63.0
|
| 12 |
+
gast==0.7.0
|
| 13 |
+
google-pasta==0.2.0
|
| 14 |
+
grpcio==1.82.1
|
| 15 |
+
h5py==3.16.0
|
| 16 |
+
idna==3.18
|
| 17 |
+
joblib==1.5.3
|
| 18 |
+
keras==3.15.0
|
| 19 |
+
kiwisolver==1.5.0
|
| 20 |
+
libclang==18.1.1
|
| 21 |
+
Markdown==3.10.2
|
| 22 |
+
markdown-it-py==4.2.0
|
| 23 |
+
MarkupSafe==3.0.3
|
| 24 |
+
matplotlib==3.11.0
|
| 25 |
+
matscipy==1.2.0
|
| 26 |
+
mdurl==0.1.2
|
| 27 |
+
ml_dtypes==0.5.4
|
| 28 |
+
mpmath==1.3.0
|
| 29 |
+
namex==0.1.0
|
| 30 |
+
narwhals==2.23.0
|
| 31 |
+
numpy==2.4.6
|
| 32 |
+
nvidia-cublas-cu12==12.9.2.10
|
| 33 |
+
nvidia-cuda-cupti-cu12==12.9.79
|
| 34 |
+
nvidia-cuda-nvcc-cu12==12.9.86
|
| 35 |
+
nvidia-cuda-nvrtc-cu12==12.9.86
|
| 36 |
+
nvidia-cuda-runtime-cu12==12.9.79
|
| 37 |
+
nvidia-cudnn-cu12==9.24.0.43
|
| 38 |
+
nvidia-cufft-cu12==11.4.1.4
|
| 39 |
+
nvidia-curand-cu12==10.3.10.19
|
| 40 |
+
nvidia-cusolver-cu12==11.7.5.82
|
| 41 |
+
nvidia-cusparse-cu12==12.5.10.65
|
| 42 |
+
nvidia-nccl-cu12==2.30.7
|
| 43 |
+
nvidia-nvjitlink-cu12==12.9.86
|
| 44 |
+
opt_einsum==3.4.0
|
| 45 |
+
optree==0.19.1
|
| 46 |
+
packaging==26.0
|
| 47 |
+
pandas==2.3.3
|
| 48 |
+
pillow==12.3.0
|
| 49 |
+
prompt_toolkit==3.0.52
|
| 50 |
+
protobuf==7.35.1
|
| 51 |
+
Pygments==2.20.0
|
| 52 |
+
pyparsing==3.3.2
|
| 53 |
+
python-dateutil==2.9.0.post0
|
| 54 |
+
pytz==2026.2
|
| 55 |
+
PyYAML==6.0.3
|
| 56 |
+
questionary==2.1.1
|
| 57 |
+
requests==2.34.2
|
| 58 |
+
rich==15.0.0
|
| 59 |
+
scikit-learn==1.9.0
|
| 60 |
+
scipy==1.17.1
|
| 61 |
+
six==1.17.0
|
| 62 |
+
sympy==1.14.0
|
| 63 |
+
tensorboard==2.20.0
|
| 64 |
+
tensorboard-data-server==0.7.2
|
| 65 |
+
tensorflow==2.20.0
|
| 66 |
+
tensorpotential==0.6.0
|
| 67 |
+
termcolor==3.3.0
|
| 68 |
+
tf_keras==2.20.1
|
| 69 |
+
threadpoolctl==3.6.0
|
| 70 |
+
tqdm==4.68.4
|
| 71 |
+
typing_extensions==4.16.0
|
| 72 |
+
tzdata==2026.2
|
| 73 |
+
urllib3==2.7.0
|
| 74 |
+
wcwidth==0.8.2
|
| 75 |
+
Werkzeug==3.1.8
|
| 76 |
+
wrapt==2.2.2
|
| 77 |
+
xlsxwriter==3.2.9
|
env_snapshots/mbd_env.yml
ADDED
|
@@ -0,0 +1,265 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
name: mbd
|
| 2 |
+
channels:
|
| 3 |
+
- defaults
|
| 4 |
+
dependencies:
|
| 5 |
+
- _libgcc_mutex=0.1=main
|
| 6 |
+
- _openmp_mutex=5.1=52_gnu
|
| 7 |
+
- bzip2=1.0.8=h5eee18b_6
|
| 8 |
+
- ca-certificates=2026.7.16=h06a4308_0
|
| 9 |
+
- ld_impl_linux-64=2.44=h9e0c5a2_3
|
| 10 |
+
- libexpat=2.8.2=h7354ed3_1
|
| 11 |
+
- libffi=3.4.8=h06d3fd0_3
|
| 12 |
+
- libgcc=15.2.0=h69a1729_8
|
| 13 |
+
- libgcc-ng=15.2.0=h166f726_8
|
| 14 |
+
- libnsl=2.0.0=h5eee18b_0
|
| 15 |
+
- libstdcxx=15.2.0=h39759b7_8
|
| 16 |
+
- libuuid=1.41.5=h5eee18b_0
|
| 17 |
+
- libxcb=1.17.0=h9b100fa_0
|
| 18 |
+
- libzlib=1.3.2=h47b2149_0
|
| 19 |
+
- ncurses=6.5=h7934f7d_0
|
| 20 |
+
- openssl=3.5.7=h1b28b03_0
|
| 21 |
+
- packaging=26.1=py311h06a4308_0
|
| 22 |
+
- pip=26.1.2=pyhc872135_0
|
| 23 |
+
- pthread-stubs=0.3=h47b2149_2
|
| 24 |
+
- python=3.11.15=h17756b0_1
|
| 25 |
+
- readline=8.3=hc2a1206_0
|
| 26 |
+
- sqlite=3.53.2=h795bf6d_0
|
| 27 |
+
- tk=8.6.15=h54e0aa7_0
|
| 28 |
+
- tzdata=2026c=he532380_0
|
| 29 |
+
- wheel=0.47.0=py311h06a4308_0
|
| 30 |
+
- xorg-libx11=1.8.12=h9b100fa_1
|
| 31 |
+
- xorg-libxau=1.0.12=h9b100fa_0
|
| 32 |
+
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
| 33 |
+
- xorg-xorgproto=2024.1=h47b2149_2
|
| 34 |
+
- xz=5.8.2=h448239c_0
|
| 35 |
+
- zlib=1.3.2=h47b2149_0
|
| 36 |
+
- pip:
|
| 37 |
+
- absl-py==2.5.0
|
| 38 |
+
- aiohappyeyeballs==2.7.1
|
| 39 |
+
- aiohttp==3.14.3
|
| 40 |
+
- aiohttp-cors==0.8.1
|
| 41 |
+
- aiosignal==1.4.0
|
| 42 |
+
- annotated-doc==0.0.5
|
| 43 |
+
- annotated-types==0.8.0
|
| 44 |
+
- antlr4-python3-runtime==4.9.3
|
| 45 |
+
- anyio==4.14.2
|
| 46 |
+
- anywidget==0.11.0
|
| 47 |
+
- ase==3.29.0
|
| 48 |
+
- ase-db-backends==0.11.0
|
| 49 |
+
- asttokens==3.0.2
|
| 50 |
+
- attrs==26.1.0
|
| 51 |
+
- bibtexparser==1.4.4
|
| 52 |
+
- boto3==1.43.67
|
| 53 |
+
- botocore==1.43.67
|
| 54 |
+
- braceexpand==0.1.7
|
| 55 |
+
- cached-path==1.8.10
|
| 56 |
+
- catbench==1.1.3
|
| 57 |
+
- certifi==2026.7.22
|
| 58 |
+
- cffi==2.1.1
|
| 59 |
+
- charset-normalizer==3.4.9
|
| 60 |
+
- chgnet==0.4.2
|
| 61 |
+
- click==8.4.2
|
| 62 |
+
- cloudpickle==3.1.2
|
| 63 |
+
- clusterscope==0.0.18
|
| 64 |
+
- colorful==0.5.8
|
| 65 |
+
- comm==0.2.3
|
| 66 |
+
- configargparse==1.7.5
|
| 67 |
+
- contourpy==1.3.3
|
| 68 |
+
- cryptography==50.0.0
|
| 69 |
+
- cuda-bindings==13.3.1
|
| 70 |
+
- cuda-pathfinder==1.6.0
|
| 71 |
+
- cuda-toolkit==13.0.3.0
|
| 72 |
+
- cycler==0.12.1
|
| 73 |
+
- cython==3.2.9
|
| 74 |
+
- distlib==0.4.3
|
| 75 |
+
- dm-tree==0.1.8
|
| 76 |
+
- dscribe==2.1.2
|
| 77 |
+
- e3nn==0.6.0
|
| 78 |
+
- executing==2.2.1
|
| 79 |
+
- fairchem-core==2.21.0
|
| 80 |
+
- fastapi==0.141.1
|
| 81 |
+
- filelock==3.32.2
|
| 82 |
+
- fonttools==4.63.0
|
| 83 |
+
- frozenlist==1.8.0
|
| 84 |
+
- fsspec==2026.7.0
|
| 85 |
+
- google-api-core==2.34.0
|
| 86 |
+
- google-auth==2.56.3
|
| 87 |
+
- google-cloud-core==2.6.1
|
| 88 |
+
- google-cloud-storage==3.13.1
|
| 89 |
+
- google-crc32c==1.8.0
|
| 90 |
+
- google-resumable-media==2.10.1
|
| 91 |
+
- googleapis-common-protos==1.75.1
|
| 92 |
+
- grpcio==1.83.0
|
| 93 |
+
- h11==0.16.0
|
| 94 |
+
- hf-xet==1.6.0
|
| 95 |
+
- httpcore==1.0.9
|
| 96 |
+
- httptools==0.8.0
|
| 97 |
+
- httpx==0.28.1
|
| 98 |
+
- huggingface-hub==1.27.0
|
| 99 |
+
- hydra-core==1.3.5
|
| 100 |
+
- idna==3.18
|
| 101 |
+
- ipython==9.16.1
|
| 102 |
+
- ipython-pygments-lexers==1.1.1
|
| 103 |
+
- ipywidgets==8.1.8
|
| 104 |
+
- jedi==0.20.0
|
| 105 |
+
- jinja2==3.1.6
|
| 106 |
+
- jmespath==1.1.0
|
| 107 |
+
- joblib==1.5.3
|
| 108 |
+
- jsonschema==4.26.0
|
| 109 |
+
- jsonschema-specifications==2025.9.1
|
| 110 |
+
- jupyterlab-widgets==3.0.16
|
| 111 |
+
- kiwisolver==1.5.0
|
| 112 |
+
- lightning==2.6.5
|
| 113 |
+
- lightning-utilities==0.15.3
|
| 114 |
+
- llvmlite==0.48.0
|
| 115 |
+
- lmdb==1.7.3
|
| 116 |
+
- lxml==6.1.1
|
| 117 |
+
- markdown==3.10.3
|
| 118 |
+
- markdown-it-py==4.2.0
|
| 119 |
+
- markupsafe==3.0.3
|
| 120 |
+
- matbench-discovery==1.3.1
|
| 121 |
+
- matplotlib==3.11.1
|
| 122 |
+
- matplotlib-inline==0.2.2
|
| 123 |
+
- matscipy==1.2.0
|
| 124 |
+
- mdurl==0.1.2
|
| 125 |
+
- mmh3==5.2.1
|
| 126 |
+
- monty==2026.7.16
|
| 127 |
+
- moyopy==0.15.0
|
| 128 |
+
- mpmath==1.3.0
|
| 129 |
+
- msgpack==1.2.1
|
| 130 |
+
- multidict==6.7.1
|
| 131 |
+
- mypy-extensions==1.1.0
|
| 132 |
+
- narwhals==2.24.0
|
| 133 |
+
- networkx==3.6.1
|
| 134 |
+
- ninja==1.13.0
|
| 135 |
+
- numba==0.66.0
|
| 136 |
+
- numpy==2.4.6
|
| 137 |
+
- nvidia-cublas==13.1.1.3
|
| 138 |
+
- nvidia-cublas-cu12==12.8.4.1
|
| 139 |
+
- nvidia-cuda-cupti==13.0.85
|
| 140 |
+
- nvidia-cuda-cupti-cu12==12.8.90
|
| 141 |
+
- nvidia-cuda-nvrtc==13.0.88
|
| 142 |
+
- nvidia-cuda-nvrtc-cu12==12.8.93
|
| 143 |
+
- nvidia-cuda-runtime==13.0.96
|
| 144 |
+
- nvidia-cuda-runtime-cu12==12.8.90
|
| 145 |
+
- nvidia-cudnn-cu12==9.10.2.21
|
| 146 |
+
- nvidia-cudnn-cu13==9.20.0.48
|
| 147 |
+
- nvidia-cufft==12.0.0.61
|
| 148 |
+
- nvidia-cufft-cu12==11.3.3.83
|
| 149 |
+
- nvidia-cufile==1.15.1.6
|
| 150 |
+
- nvidia-cufile-cu12==1.13.1.3
|
| 151 |
+
- nvidia-curand==10.4.0.35
|
| 152 |
+
- nvidia-curand-cu12==10.3.9.90
|
| 153 |
+
- nvidia-cusolver==12.0.4.66
|
| 154 |
+
- nvidia-cusolver-cu12==11.7.3.90
|
| 155 |
+
- nvidia-cusparse==12.6.3.3
|
| 156 |
+
- nvidia-cusparse-cu12==12.5.8.93
|
| 157 |
+
- nvidia-cusparselt-cu12==0.7.1
|
| 158 |
+
- nvidia-cusparselt-cu13==0.8.1
|
| 159 |
+
- nvidia-ml-py3==7.352.0
|
| 160 |
+
- nvidia-nccl-cu12==2.27.3
|
| 161 |
+
- nvidia-nccl-cu13==2.29.7
|
| 162 |
+
- nvidia-nvjitlink==13.3.33
|
| 163 |
+
- nvidia-nvjitlink-cu12==12.8.93
|
| 164 |
+
- nvidia-nvshmem-cu13==3.4.5
|
| 165 |
+
- nvidia-nvtx==13.0.85
|
| 166 |
+
- nvidia-nvtx-cu12==12.8.90
|
| 167 |
+
- omegaconf==2.3.1
|
| 168 |
+
- opencensus==0.11.4
|
| 169 |
+
- opencensus-context==0.1.3
|
| 170 |
+
- opentelemetry-api==1.44.0
|
| 171 |
+
- opentelemetry-exporter-prometheus==0.65b0
|
| 172 |
+
- opentelemetry-proto==1.44.0
|
| 173 |
+
- opentelemetry-sdk==1.44.0
|
| 174 |
+
- opentelemetry-semantic-conventions==0.65b0
|
| 175 |
+
- opt-einsum==3.4.0
|
| 176 |
+
- opt-einsum-fx==0.1.4
|
| 177 |
+
- orb-models==0.5.5
|
| 178 |
+
- orjson==3.11.9
|
| 179 |
+
- palettable==3.3.3
|
| 180 |
+
- pandas==3.0.5
|
| 181 |
+
- parso==0.8.7
|
| 182 |
+
- pexpect==4.9.0
|
| 183 |
+
- pillow==12.3.0
|
| 184 |
+
- platformdirs==4.11.1
|
| 185 |
+
- plotly==6.9.0
|
| 186 |
+
- prometheus-client==0.26.0
|
| 187 |
+
- prompt-toolkit==3.0.53
|
| 188 |
+
- propcache==0.5.2
|
| 189 |
+
- proto-plus==1.28.3
|
| 190 |
+
- protobuf==7.35.1
|
| 191 |
+
- psutil==7.2.2
|
| 192 |
+
- psycopg2-binary==2.9.12
|
| 193 |
+
- psygnal==0.15.1
|
| 194 |
+
- ptyprocess==0.7.0
|
| 195 |
+
- pure-eval==0.2.3
|
| 196 |
+
- py-spy==0.4.2
|
| 197 |
+
- pyasn1==0.6.4
|
| 198 |
+
- pyasn1-modules==0.4.2
|
| 199 |
+
- pycparser==3.0
|
| 200 |
+
- pydantic==2.13.4
|
| 201 |
+
- pydantic-core==2.46.4
|
| 202 |
+
- pygments==2.20.0
|
| 203 |
+
- pymatgen==2026.5.4
|
| 204 |
+
- pymatgen-core==2026.7.31
|
| 205 |
+
- pymatviz==0.18.0
|
| 206 |
+
- pymysql==1.2.0
|
| 207 |
+
- pyparsing==3.3.2
|
| 208 |
+
- pyre-extensions==0.0.32
|
| 209 |
+
- python-dateutil==2.9.0.post0
|
| 210 |
+
- python-discovery==1.5.1
|
| 211 |
+
- python-dotenv==1.2.2
|
| 212 |
+
- pytorch-lightning==2.6.5
|
| 213 |
+
- pyyaml==6.0.3
|
| 214 |
+
- ray==2.56.1
|
| 215 |
+
- referencing==0.37.0
|
| 216 |
+
- requests==2.34.2
|
| 217 |
+
- rich==13.9.4
|
| 218 |
+
- rpds-py==2026.6.3
|
| 219 |
+
- ruamel-yaml==0.19.1
|
| 220 |
+
- s3transfer==0.19.2
|
| 221 |
+
- scikit-learn==1.9.0
|
| 222 |
+
- scipy==1.17.1
|
| 223 |
+
- seaborn==0.13.2
|
| 224 |
+
- sentry-sdk==2.66.1
|
| 225 |
+
- setuptools==80.10.2
|
| 226 |
+
- sevenn==0.13.0
|
| 227 |
+
- six==1.17.0
|
| 228 |
+
- smart-open==8.0.1
|
| 229 |
+
- sparse==0.19.1
|
| 230 |
+
- spglib==2.7.0
|
| 231 |
+
- stack-data==0.6.3
|
| 232 |
+
- starlette==1.6.0
|
| 233 |
+
- submitit==1.5.4
|
| 234 |
+
- sympy==1.14.0
|
| 235 |
+
- tabulate==0.10.0
|
| 236 |
+
- tace==0.1.0
|
| 237 |
+
- tensorboard==2.21.0
|
| 238 |
+
- tensorboard-data-server==0.7.2
|
| 239 |
+
- threadpoolctl==3.6.0
|
| 240 |
+
- torch==2.8.0
|
| 241 |
+
- torch-geometric==2.8.0.post1
|
| 242 |
+
- torchmetrics==1.9.0
|
| 243 |
+
- torchtnt==0.2.4
|
| 244 |
+
- tqdm==4.70.0
|
| 245 |
+
- traitlets==5.16.1
|
| 246 |
+
- triton==3.4.0
|
| 247 |
+
- typing-extensions==4.16.0
|
| 248 |
+
- typing-inspect==0.9.0
|
| 249 |
+
- typing-inspection==0.4.2
|
| 250 |
+
- uncertainties==3.2.3
|
| 251 |
+
- urllib3==2.7.0
|
| 252 |
+
- uvicorn==0.52.1
|
| 253 |
+
- uvloop==0.22.1
|
| 254 |
+
- virtualenv==21.7.3
|
| 255 |
+
- wandb==0.28.1
|
| 256 |
+
- watchfiles==1.2.0
|
| 257 |
+
- wcwidth==0.8.2
|
| 258 |
+
- websockets==17.0.1
|
| 259 |
+
- werkzeug==3.1.8
|
| 260 |
+
- widgetsnbextension==4.0.15
|
| 261 |
+
- wrapt==2.3.0
|
| 262 |
+
- xlsxwriter==3.2.9
|
| 263 |
+
- xxhash==3.8.1
|
| 264 |
+
- yarl==1.24.5
|
| 265 |
+
prefix: /home/ccel2026/miniconda3/envs/mbd
|
env_snapshots/mbd_pip_freeze.txt
ADDED
|
@@ -0,0 +1,229 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
absl-py==2.5.0
|
| 2 |
+
aiohappyeyeballs==2.7.1
|
| 3 |
+
aiohttp==3.14.3
|
| 4 |
+
aiohttp-cors==0.8.1
|
| 5 |
+
aiosignal==1.4.0
|
| 6 |
+
annotated-doc==0.0.5
|
| 7 |
+
annotated-types==0.8.0
|
| 8 |
+
antlr4-python3-runtime==4.9.3
|
| 9 |
+
anyio==4.14.2
|
| 10 |
+
anywidget==0.11.0
|
| 11 |
+
ase==3.29.0
|
| 12 |
+
ase_db_backends==0.11.0
|
| 13 |
+
asttokens==3.0.2
|
| 14 |
+
attrs==26.1.0
|
| 15 |
+
bibtexparser==1.4.4
|
| 16 |
+
boto3==1.43.67
|
| 17 |
+
botocore==1.43.67
|
| 18 |
+
braceexpand==0.1.7
|
| 19 |
+
cabarchive==0.2.5
|
| 20 |
+
cached_path==1.8.10
|
| 21 |
+
catbench==1.1.3
|
| 22 |
+
certifi==2026.7.22
|
| 23 |
+
cffi==2.1.1
|
| 24 |
+
charset-normalizer==3.4.9
|
| 25 |
+
chgnet==0.4.2
|
| 26 |
+
click==8.4.2
|
| 27 |
+
cloudpickle==3.1.2
|
| 28 |
+
clusterscope==0.0.18
|
| 29 |
+
colorful==0.5.8
|
| 30 |
+
comm==0.2.3
|
| 31 |
+
ConfigArgParse==1.7.5
|
| 32 |
+
contourpy==1.3.3
|
| 33 |
+
cryptography==50.0.0
|
| 34 |
+
cuda-bindings==13.3.1
|
| 35 |
+
cuda-pathfinder==1.6.0
|
| 36 |
+
cuda-toolkit==13.0.3.0
|
| 37 |
+
cycler==0.12.1
|
| 38 |
+
Cython==3.2.9
|
| 39 |
+
distlib==0.4.3
|
| 40 |
+
dm-tree==0.1.8
|
| 41 |
+
dscribe==2.1.2
|
| 42 |
+
e3nn==0.6.0
|
| 43 |
+
executing==2.2.1
|
| 44 |
+
fairchem-core==2.21.0
|
| 45 |
+
fastapi==0.141.1
|
| 46 |
+
filelock==3.32.2
|
| 47 |
+
fonttools==4.63.0
|
| 48 |
+
frozenlist==1.8.0
|
| 49 |
+
fsspec==2026.7.0
|
| 50 |
+
google-api-core==2.34.0
|
| 51 |
+
google-auth==2.56.3
|
| 52 |
+
google-cloud-core==2.6.1
|
| 53 |
+
google-cloud-storage==3.13.1
|
| 54 |
+
google-crc32c==1.8.0
|
| 55 |
+
google-resumable-media==2.10.1
|
| 56 |
+
googleapis-common-protos==1.75.1
|
| 57 |
+
grpcio==1.83.0
|
| 58 |
+
h11==0.16.0
|
| 59 |
+
hf-xet==1.6.0
|
| 60 |
+
httpcore==1.0.9
|
| 61 |
+
httptools==0.8.0
|
| 62 |
+
httpx==0.28.1
|
| 63 |
+
huggingface_hub==1.27.0
|
| 64 |
+
hydra-core==1.3.5
|
| 65 |
+
idna==3.18
|
| 66 |
+
ipython==9.16.1
|
| 67 |
+
ipython_pygments_lexers==1.1.1
|
| 68 |
+
ipywidgets==8.1.8
|
| 69 |
+
jedi==0.20.0
|
| 70 |
+
Jinja2==3.1.6
|
| 71 |
+
jmespath==1.1.0
|
| 72 |
+
joblib==1.5.3
|
| 73 |
+
jsonschema==4.26.0
|
| 74 |
+
jsonschema-specifications==2025.9.1
|
| 75 |
+
jupyterlab_widgets==3.0.16
|
| 76 |
+
kiwisolver==1.5.0
|
| 77 |
+
lightning==2.6.5
|
| 78 |
+
lightning-utilities==0.15.3
|
| 79 |
+
llvmlite==0.48.0
|
| 80 |
+
lmdb==1.7.3
|
| 81 |
+
lxml==6.1.1
|
| 82 |
+
Markdown==3.10.3
|
| 83 |
+
markdown-it-py==4.2.0
|
| 84 |
+
MarkupSafe==3.0.3
|
| 85 |
+
matbench-discovery==1.3.1
|
| 86 |
+
matplotlib==3.11.1
|
| 87 |
+
matplotlib-inline==0.2.2
|
| 88 |
+
matscipy==1.2.0
|
| 89 |
+
mdurl==0.1.2
|
| 90 |
+
mmh3==5.2.1
|
| 91 |
+
monty==2026.7.16
|
| 92 |
+
moyopy==0.15.0
|
| 93 |
+
mpmath==1.3.0
|
| 94 |
+
msgpack==1.2.1
|
| 95 |
+
multidict==6.7.1
|
| 96 |
+
mypy_extensions==1.1.0
|
| 97 |
+
narwhals==2.24.0
|
| 98 |
+
networkx==3.6.1
|
| 99 |
+
ninja==1.13.0
|
| 100 |
+
numba==0.66.0
|
| 101 |
+
numpy==2.4.6
|
| 102 |
+
nvidia-cublas==13.1.1.3
|
| 103 |
+
nvidia-cublas-cu12==12.8.4.1
|
| 104 |
+
nvidia-cuda-cupti==13.0.85
|
| 105 |
+
nvidia-cuda-cupti-cu12==12.8.90
|
| 106 |
+
nvidia-cuda-nvrtc==13.0.88
|
| 107 |
+
nvidia-cuda-nvrtc-cu12==12.8.93
|
| 108 |
+
nvidia-cuda-runtime==13.0.96
|
| 109 |
+
nvidia-cuda-runtime-cu12==12.8.90
|
| 110 |
+
nvidia-cudnn-cu12==9.10.2.21
|
| 111 |
+
nvidia-cudnn-cu13==9.20.0.48
|
| 112 |
+
nvidia-cufft==12.0.0.61
|
| 113 |
+
nvidia-cufft-cu12==11.3.3.83
|
| 114 |
+
nvidia-cufile==1.15.1.6
|
| 115 |
+
nvidia-cufile-cu12==1.13.1.3
|
| 116 |
+
nvidia-curand==10.4.0.35
|
| 117 |
+
nvidia-curand-cu12==10.3.9.90
|
| 118 |
+
nvidia-cusolver==12.0.4.66
|
| 119 |
+
nvidia-cusolver-cu12==11.7.3.90
|
| 120 |
+
nvidia-cusparse==12.6.3.3
|
| 121 |
+
nvidia-cusparse-cu12==12.5.8.93
|
| 122 |
+
nvidia-cusparselt-cu12==0.7.1
|
| 123 |
+
nvidia-cusparselt-cu13==0.8.1
|
| 124 |
+
nvidia-ml-py3==7.352.0
|
| 125 |
+
nvidia-nccl-cu12==2.27.3
|
| 126 |
+
nvidia-nccl-cu13==2.29.7
|
| 127 |
+
nvidia-nvjitlink==13.3.33
|
| 128 |
+
nvidia-nvjitlink-cu12==12.8.93
|
| 129 |
+
nvidia-nvshmem-cu13==3.4.5
|
| 130 |
+
nvidia-nvtx==13.0.85
|
| 131 |
+
nvidia-nvtx-cu12==12.8.90
|
| 132 |
+
omegaconf==2.3.1
|
| 133 |
+
opencensus==0.11.4
|
| 134 |
+
opencensus-context==0.1.3
|
| 135 |
+
opentelemetry-api==1.44.0
|
| 136 |
+
opentelemetry-exporter-prometheus==0.65b0
|
| 137 |
+
opentelemetry-proto==1.44.0
|
| 138 |
+
opentelemetry-sdk==1.44.0
|
| 139 |
+
opentelemetry-semantic-conventions==0.65b0
|
| 140 |
+
opt-einsum-fx==0.1.4
|
| 141 |
+
opt_einsum==3.4.0
|
| 142 |
+
orb-models==0.5.5
|
| 143 |
+
orjson==3.11.9
|
| 144 |
+
packaging==26.1
|
| 145 |
+
palettable==3.3.3
|
| 146 |
+
pandas==3.0.5
|
| 147 |
+
parso==0.8.7
|
| 148 |
+
pexpect==4.9.0
|
| 149 |
+
pillow==12.3.0
|
| 150 |
+
platformdirs==4.11.1
|
| 151 |
+
plotly==6.9.0
|
| 152 |
+
prometheus_client==0.26.0
|
| 153 |
+
prompt_toolkit==3.0.53
|
| 154 |
+
propcache==0.5.2
|
| 155 |
+
proto-plus==1.28.3
|
| 156 |
+
protobuf==7.35.1
|
| 157 |
+
psutil==7.2.2
|
| 158 |
+
psycopg2-binary==2.9.12
|
| 159 |
+
psygnal==0.15.1
|
| 160 |
+
ptyprocess==0.7.0
|
| 161 |
+
pure_eval==0.2.3
|
| 162 |
+
py-spy==0.4.2
|
| 163 |
+
pyasn1==0.6.4
|
| 164 |
+
pyasn1_modules==0.4.2
|
| 165 |
+
pycparser==3.0
|
| 166 |
+
pydantic==2.13.4
|
| 167 |
+
pydantic_core==2.46.4
|
| 168 |
+
Pygments==2.20.0
|
| 169 |
+
pymatgen==2026.5.4
|
| 170 |
+
pymatgen-core==2026.7.31
|
| 171 |
+
pymatviz==0.18.0
|
| 172 |
+
PyMySQL==1.2.0
|
| 173 |
+
pyparsing==3.3.2
|
| 174 |
+
pyre-extensions==0.0.32
|
| 175 |
+
python-dateutil==2.9.0.post0
|
| 176 |
+
python-discovery==1.5.1
|
| 177 |
+
python-dotenv==1.2.2
|
| 178 |
+
pytorch-lightning==2.6.5
|
| 179 |
+
PyYAML==6.0.3
|
| 180 |
+
ray==2.56.1
|
| 181 |
+
referencing==0.37.0
|
| 182 |
+
requests==2.34.2
|
| 183 |
+
rich==13.9.4
|
| 184 |
+
rpds-py==2026.6.3
|
| 185 |
+
ruamel.yaml==0.19.1
|
| 186 |
+
s3transfer==0.19.2
|
| 187 |
+
scikit-learn==1.9.0
|
| 188 |
+
scipy==1.17.1
|
| 189 |
+
seaborn==0.13.2
|
| 190 |
+
sentry-sdk==2.66.1
|
| 191 |
+
sevenn==0.13.0
|
| 192 |
+
six==1.17.0
|
| 193 |
+
smart_open==8.0.1
|
| 194 |
+
sparse==0.19.1
|
| 195 |
+
spglib==2.7.0
|
| 196 |
+
stack-data==0.6.3
|
| 197 |
+
starlette==1.6.0
|
| 198 |
+
submitit==1.5.4
|
| 199 |
+
sympy==1.14.0
|
| 200 |
+
tabulate==0.10.0
|
| 201 |
+
TACE @ git+https://github.com/xvzemin/tace@4fa3430421f81a0ca79f1d6b94d0bdbd18a24206
|
| 202 |
+
tensorboard==2.21.0
|
| 203 |
+
tensorboard-data-server==0.7.2
|
| 204 |
+
threadpoolctl==3.6.0
|
| 205 |
+
torch==2.8.0
|
| 206 |
+
torch-geometric==2.8.0.post1
|
| 207 |
+
torchmetrics==1.9.0
|
| 208 |
+
torchtnt==0.2.4
|
| 209 |
+
tqdm==4.70.0
|
| 210 |
+
traitlets==5.16.1
|
| 211 |
+
triton==3.4.0
|
| 212 |
+
typing-inspect==0.9.0
|
| 213 |
+
typing-inspection==0.4.2
|
| 214 |
+
typing_extensions==4.16.0
|
| 215 |
+
uncertainties==3.2.3
|
| 216 |
+
urllib3==2.7.0
|
| 217 |
+
uvicorn==0.52.1
|
| 218 |
+
uvloop==0.22.1
|
| 219 |
+
virtualenv==21.7.3
|
| 220 |
+
wandb==0.28.1
|
| 221 |
+
watchfiles==1.2.0
|
| 222 |
+
wcwidth==0.8.2
|
| 223 |
+
websockets==17.0.1
|
| 224 |
+
Werkzeug==3.1.8
|
| 225 |
+
widgetsnbextension==4.0.15
|
| 226 |
+
wrapt==2.3.0
|
| 227 |
+
xlsxwriter==3.2.9
|
| 228 |
+
xxhash==3.8.1
|
| 229 |
+
yarl==1.24.5
|
env_snapshots/nequip_env.yml
ADDED
|
@@ -0,0 +1,113 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
name: nequip
|
| 2 |
+
channels:
|
| 3 |
+
- defaults
|
| 4 |
+
- conda-forge
|
| 5 |
+
dependencies:
|
| 6 |
+
- _libgcc_mutex=0.1=main
|
| 7 |
+
- _openmp_mutex=5.1=52_gnu
|
| 8 |
+
- binutils=2.44=h4852527_5
|
| 9 |
+
- binutils_impl_linux-64=2.44=h78f17ca_3
|
| 10 |
+
- binutils_linux-64=2.44=hc03a8fd_3
|
| 11 |
+
- bzip2=1.0.8=h5eee18b_6
|
| 12 |
+
- c-compiler=1.11.0=h4d9bdce_0
|
| 13 |
+
- ca-certificates=2026.6.17=hbd8a1cb_0
|
| 14 |
+
- conda-gcc-specs=14.3.0=he8ccf15_19
|
| 15 |
+
- cxx-compiler=1.11.0=hfcd1e18_0
|
| 16 |
+
- gcc=14.3.0=h76bdaa0_7
|
| 17 |
+
- gcc_impl_linux-64=14.3.0=hd9e9e21_7
|
| 18 |
+
- gcc_linux-64=14.3.0=h50e9bb6_27
|
| 19 |
+
- gxx=14.3.0=he448592_7
|
| 20 |
+
- gxx_impl_linux-64=14.3.0=he663afc_7
|
| 21 |
+
- gxx_linux-64=14.3.0=hd240bd5_27
|
| 22 |
+
- kernel-headers_linux-64=6.12.0=he073ed8_6
|
| 23 |
+
- ld_impl_linux-64=2.44=h9e0c5a2_3
|
| 24 |
+
- libexpat=2.8.1=h7354ed3_1
|
| 25 |
+
- libffi=3.4.8=h06d3fd0_3
|
| 26 |
+
- libgcc=15.2.0=h69a1729_8
|
| 27 |
+
- libgcc-devel_linux-64=14.3.0=h85bb3a7_107
|
| 28 |
+
- libgcc-ng=15.2.0=h166f726_8
|
| 29 |
+
- libgfortran=15.2.0=h69a702a_19
|
| 30 |
+
- libgfortran5=15.2.0=h68bc16d_19
|
| 31 |
+
- libgomp=15.2.0=h4751f2c_8
|
| 32 |
+
- libnsl=2.0.0=h5eee18b_0
|
| 33 |
+
- libsanitizer=14.3.0=hd08acf3_7
|
| 34 |
+
- libstdcxx=15.2.0=h39759b7_8
|
| 35 |
+
- libstdcxx-devel_linux-64=14.3.0=h85bb3a7_107
|
| 36 |
+
- libuuid=1.41.5=h5eee18b_0
|
| 37 |
+
- libxcb=1.17.0=h9b100fa_0
|
| 38 |
+
- libzlib=1.3.2=h47b2149_0
|
| 39 |
+
- ncurses=6.5=h7934f7d_0
|
| 40 |
+
- openssl=3.6.3=h35e630c_0
|
| 41 |
+
- packaging=26.0=py311h06a4308_0
|
| 42 |
+
- packmol=21.2.1=h4537401_0
|
| 43 |
+
- pip=26.1.1=pyhc872135_1
|
| 44 |
+
- pthread-stubs=0.3=h0ce48e5_1
|
| 45 |
+
- python=3.11.15=h17756b0_1
|
| 46 |
+
- readline=8.3=hc2a1206_0
|
| 47 |
+
- sqlite=3.53.2=h795bf6d_0
|
| 48 |
+
- sysroot_linux-64=2.39=hc4b9eeb_6
|
| 49 |
+
- tk=8.6.15=h54e0aa7_0
|
| 50 |
+
- tzdata=2026b=he532380_0
|
| 51 |
+
- wheel=0.47.0=py311h06a4308_0
|
| 52 |
+
- xorg-libx11=1.8.12=h9b100fa_1
|
| 53 |
+
- xorg-libxau=1.0.12=h9b100fa_0
|
| 54 |
+
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
| 55 |
+
- xorg-xorgproto=2024.1=h5eee18b_1
|
| 56 |
+
- xz=5.8.2=h448239c_0
|
| 57 |
+
- zlib=1.3.2=h47b2149_0
|
| 58 |
+
- pip:
|
| 59 |
+
- aiohappyeyeballs==2.6.2
|
| 60 |
+
- aiohttp==3.14.1
|
| 61 |
+
- aiosignal==1.4.0
|
| 62 |
+
- antlr4-python3-runtime==4.9.3
|
| 63 |
+
- ase==3.28.0
|
| 64 |
+
- attrs==26.1.0
|
| 65 |
+
- catbench==1.1.3
|
| 66 |
+
- certifi==2026.6.17
|
| 67 |
+
- charset-normalizer==3.4.7
|
| 68 |
+
- contourpy==1.3.3
|
| 69 |
+
- cycler==0.12.1
|
| 70 |
+
- e3nn==0.6.0
|
| 71 |
+
- filelock==3.29.0
|
| 72 |
+
- fonttools==4.63.0
|
| 73 |
+
- frozenlist==1.8.0
|
| 74 |
+
- fsspec==2026.4.0
|
| 75 |
+
- hydra-core==1.3.3
|
| 76 |
+
- idna==3.18
|
| 77 |
+
- jinja2==3.1.6
|
| 78 |
+
- kiwisolver==1.5.0
|
| 79 |
+
- lightning==2.6.5
|
| 80 |
+
- lightning-utilities==0.15.3
|
| 81 |
+
- lmdb==2.2.1
|
| 82 |
+
- markupsafe==3.0.3
|
| 83 |
+
- matplotlib==3.11.0
|
| 84 |
+
- matscipy==1.2.0
|
| 85 |
+
- mpmath==1.3.0
|
| 86 |
+
- multidict==6.7.1
|
| 87 |
+
- nequip==0.18.0
|
| 88 |
+
- networkx==3.6.1
|
| 89 |
+
- numpy==2.4.6
|
| 90 |
+
- omegaconf==2.3.1
|
| 91 |
+
- opt-einsum==3.4.0
|
| 92 |
+
- opt-einsum-fx==0.1.4
|
| 93 |
+
- pandas==3.0.5
|
| 94 |
+
- pillow==12.2.0
|
| 95 |
+
- propcache==0.5.2
|
| 96 |
+
- pyparsing==3.3.2
|
| 97 |
+
- python-dateutil==2.9.0.post0
|
| 98 |
+
- pytorch-lightning==2.6.5
|
| 99 |
+
- pyyaml==6.0.3
|
| 100 |
+
- rdkit==2026.3.3
|
| 101 |
+
- requests==2.34.2
|
| 102 |
+
- scipy==1.17.1
|
| 103 |
+
- setuptools==70.2.0
|
| 104 |
+
- six==1.17.0
|
| 105 |
+
- sympy==1.14.0
|
| 106 |
+
- torch==2.12.1+cpu
|
| 107 |
+
- torchmetrics==1.9.0
|
| 108 |
+
- tqdm==4.68.3
|
| 109 |
+
- typing-extensions==4.15.0
|
| 110 |
+
- urllib3==2.7.0
|
| 111 |
+
- xlsxwriter==3.2.9
|
| 112 |
+
- yarl==1.24.2
|
| 113 |
+
prefix: /home/ccel2026/miniconda3/envs/nequip
|
env_snapshots/nequip_pip_freeze.txt
ADDED
|
@@ -0,0 +1,55 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
aiohappyeyeballs==2.6.2
|
| 2 |
+
aiohttp==3.14.1
|
| 3 |
+
aiosignal==1.4.0
|
| 4 |
+
antlr4-python3-runtime==4.9.3
|
| 5 |
+
ase==3.28.0
|
| 6 |
+
attrs==26.1.0
|
| 7 |
+
cabarchive==0.2.5
|
| 8 |
+
catbench==1.1.3
|
| 9 |
+
certifi==2026.6.17
|
| 10 |
+
charset-normalizer==3.4.7
|
| 11 |
+
contourpy==1.3.3
|
| 12 |
+
cycler==0.12.1
|
| 13 |
+
e3nn==0.6.0
|
| 14 |
+
filelock==3.29.0
|
| 15 |
+
fonttools==4.63.0
|
| 16 |
+
frozenlist==1.8.0
|
| 17 |
+
fsspec==2026.4.0
|
| 18 |
+
hydra-core==1.3.3
|
| 19 |
+
idna==3.18
|
| 20 |
+
Jinja2==3.1.6
|
| 21 |
+
kiwisolver==1.5.0
|
| 22 |
+
lightning==2.6.5
|
| 23 |
+
lightning-utilities==0.15.3
|
| 24 |
+
lmdb==2.2.1
|
| 25 |
+
MarkupSafe==3.0.3
|
| 26 |
+
matplotlib==3.11.0
|
| 27 |
+
matscipy==1.2.0
|
| 28 |
+
mpmath==1.3.0
|
| 29 |
+
multidict==6.7.1
|
| 30 |
+
nequip==0.18.0
|
| 31 |
+
networkx==3.6.1
|
| 32 |
+
numpy==2.4.6
|
| 33 |
+
omegaconf==2.3.1
|
| 34 |
+
opt-einsum-fx==0.1.4
|
| 35 |
+
opt_einsum==3.4.0
|
| 36 |
+
packaging==26.0
|
| 37 |
+
pandas==3.0.5
|
| 38 |
+
pillow==12.2.0
|
| 39 |
+
propcache==0.5.2
|
| 40 |
+
pyparsing==3.3.2
|
| 41 |
+
python-dateutil==2.9.0.post0
|
| 42 |
+
pytorch-lightning==2.6.5
|
| 43 |
+
PyYAML==6.0.3
|
| 44 |
+
rdkit==2026.3.3
|
| 45 |
+
requests==2.34.2
|
| 46 |
+
scipy==1.17.1
|
| 47 |
+
six==1.17.0
|
| 48 |
+
sympy==1.14.0
|
| 49 |
+
torch==2.12.1+cpu
|
| 50 |
+
torchmetrics==1.9.0
|
| 51 |
+
tqdm==4.68.3
|
| 52 |
+
typing_extensions==4.15.0
|
| 53 |
+
urllib3==2.7.0
|
| 54 |
+
xlsxwriter==3.2.9
|
| 55 |
+
yarl==1.24.2
|
env_snapshots/tace2_env.yml
ADDED
|
@@ -0,0 +1,137 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
name: tace2
|
| 2 |
+
channels:
|
| 3 |
+
- defaults
|
| 4 |
+
- conda-forge
|
| 5 |
+
dependencies:
|
| 6 |
+
- _libgcc_mutex=0.1=main
|
| 7 |
+
- _openmp_mutex=5.1=52_gnu
|
| 8 |
+
- binutils_impl_linux-64=2.44=h78f17ca_3
|
| 9 |
+
- bzip2=1.0.8=h5eee18b_6
|
| 10 |
+
- c-ares=1.34.8=h280c20c_1
|
| 11 |
+
- ca-certificates=2026.7.22=hbd8a1cb_0
|
| 12 |
+
- cmake=4.3.1=hc85cc9f_0
|
| 13 |
+
- conda-gcc-specs=15.2.0=h53410ce_20
|
| 14 |
+
- gcc=15.2.0=hc115cf6_7
|
| 15 |
+
- gcc_impl_linux-64=15.2.0=hcacfade_7
|
| 16 |
+
- gxx=15.2.0=h834e499_7
|
| 17 |
+
- gxx_impl_linux-64=15.2.0=h54ccb8d_7
|
| 18 |
+
- icu=78.3=py310h44b86e0_2
|
| 19 |
+
- kernel-headers_linux-64=6.12.0=he073ed8_6
|
| 20 |
+
- keyutils=1.6.3=hb9d3cd8_0
|
| 21 |
+
- krb5=1.22.2=hbde042b_1
|
| 22 |
+
- ld_impl_linux-64=2.44=h9e0c5a2_3
|
| 23 |
+
- libcurl=8.21.0=heca4667_4
|
| 24 |
+
- libedit=3.1.20250104=pl5321h7949ede_0
|
| 25 |
+
- libev=4.33=h280c20c_3
|
| 26 |
+
- libexpat=2.8.2=h7354ed3_1
|
| 27 |
+
- libffi=3.4.8=h06d3fd0_3
|
| 28 |
+
- libgcc=15.2.0=h69a1729_8
|
| 29 |
+
- libgcc-devel_linux-64=15.2.0=h73f6952_107
|
| 30 |
+
- libgcc-ng=15.2.0=h166f726_8
|
| 31 |
+
- libgomp=15.2.0=h4751f2c_8
|
| 32 |
+
- liblzma=5.8.2=hb03c661_0
|
| 33 |
+
- libnghttp2=1.68.1=h877daf1_0
|
| 34 |
+
- libnsl=2.0.0=h5eee18b_0
|
| 35 |
+
- libpsl=0.23.1=hf670292_0
|
| 36 |
+
- libsanitizer=15.2.0=hb13aed2_7
|
| 37 |
+
- libssh2=1.11.1=hcf80075_0
|
| 38 |
+
- libstdcxx=15.2.0=h39759b7_8
|
| 39 |
+
- libstdcxx-devel_linux-64=15.2.0=h73f6952_107
|
| 40 |
+
- libuuid=1.41.5=h5eee18b_0
|
| 41 |
+
- libuv=1.52.1=h280c20c_1
|
| 42 |
+
- libxcb=1.17.0=h9b100fa_0
|
| 43 |
+
- libzlib=1.3.2=h47b2149_0
|
| 44 |
+
- ncurses=6.5=h7934f7d_0
|
| 45 |
+
- openssl=3.6.3=h35e630c_1
|
| 46 |
+
- packaging=26.2=py311h06a4308_0
|
| 47 |
+
- pip=26.1.2=pyhc872135_0
|
| 48 |
+
- pthread-stubs=0.3=h47b2149_2
|
| 49 |
+
- python=3.11.15=h17756b0_1
|
| 50 |
+
- readline=8.3=hc2a1206_0
|
| 51 |
+
- rhash=1.4.6=hb9d3cd8_1
|
| 52 |
+
- setuptools=83.0.0=py311h06a4308_0
|
| 53 |
+
- sqlite=3.53.2=h795bf6d_0
|
| 54 |
+
- sysroot_linux-64=2.39=hc4b9eeb_6
|
| 55 |
+
- tk=8.6.15=h54e0aa7_0
|
| 56 |
+
- tzdata=2026c=he532380_0
|
| 57 |
+
- wheel=0.47.0=py311h06a4308_0
|
| 58 |
+
- xorg-libx11=1.8.12=h9b100fa_1
|
| 59 |
+
- xorg-libxau=1.0.12=h9b100fa_0
|
| 60 |
+
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
| 61 |
+
- xorg-xorgproto=2024.1=h47b2149_2
|
| 62 |
+
- xz=5.8.2=h448239c_0
|
| 63 |
+
- zlib=1.3.2=h47b2149_0
|
| 64 |
+
- zstd=1.5.7=hb78ec9c_6
|
| 65 |
+
- pip:
|
| 66 |
+
- aiohappyeyeballs==2.7.1
|
| 67 |
+
- aiohttp==3.14.3
|
| 68 |
+
- aiosignal==1.4.0
|
| 69 |
+
- antlr4-python3-runtime==4.9.3
|
| 70 |
+
- anyio==4.14.2
|
| 71 |
+
- ase==3.29.0
|
| 72 |
+
- ase-db-backends==0.11.0
|
| 73 |
+
- attrs==26.1.0
|
| 74 |
+
- catbench==1.1.3
|
| 75 |
+
- certifi==2026.7.22
|
| 76 |
+
- cffi==2.1.1
|
| 77 |
+
- charset-normalizer==3.5.0
|
| 78 |
+
- click==8.4.2
|
| 79 |
+
- configargparse==1.7.5
|
| 80 |
+
- contourpy==1.3.3
|
| 81 |
+
- cryptography==50.0.0
|
| 82 |
+
- cycler==0.12.1
|
| 83 |
+
- e3nn==0.6.0
|
| 84 |
+
- filelock==3.29.0
|
| 85 |
+
- fonttools==4.63.0
|
| 86 |
+
- frozenlist==1.8.0
|
| 87 |
+
- fsspec==2026.4.0
|
| 88 |
+
- h11==0.16.0
|
| 89 |
+
- hf-xet==1.6.0
|
| 90 |
+
- httpcore==1.0.9
|
| 91 |
+
- httpx==0.28.1
|
| 92 |
+
- huggingface-hub==1.27.0
|
| 93 |
+
- hydra-core==1.3.5
|
| 94 |
+
- idna==3.18
|
| 95 |
+
- jinja2==3.1.6
|
| 96 |
+
- kiwisolver==1.5.0
|
| 97 |
+
- lightning==2.6.5
|
| 98 |
+
- lightning-utilities==0.15.3
|
| 99 |
+
- lmdb==2.3.0
|
| 100 |
+
- markupsafe==3.0.3
|
| 101 |
+
- matplotlib==3.11.1
|
| 102 |
+
- matscipy==1.2.0
|
| 103 |
+
- mpmath==1.3.0
|
| 104 |
+
- multidict==6.7.1
|
| 105 |
+
- networkx==3.6.1
|
| 106 |
+
- ninja==1.13.0
|
| 107 |
+
- numpy==2.4.6
|
| 108 |
+
- omegaconf==2.3.1
|
| 109 |
+
- openequivariance==0.6.4
|
| 110 |
+
- opt-einsum==3.4.0
|
| 111 |
+
- opt-einsum-fx==0.1.4
|
| 112 |
+
- pandas==3.0.5
|
| 113 |
+
- pillow==12.3.0
|
| 114 |
+
- propcache==0.5.2
|
| 115 |
+
- psutil==7.2.2
|
| 116 |
+
- psycopg2-binary==2.9.12
|
| 117 |
+
- pycparser==3.0
|
| 118 |
+
- pymysql==1.2.0
|
| 119 |
+
- pyparsing==3.3.2
|
| 120 |
+
- python-dateutil==2.9.0.post0
|
| 121 |
+
- pytorch-lightning==2.6.5
|
| 122 |
+
- pyyaml==6.0.3
|
| 123 |
+
- requests==2.34.2
|
| 124 |
+
- scipy==1.17.1
|
| 125 |
+
- six==1.17.0
|
| 126 |
+
- sympy==1.14.0
|
| 127 |
+
- tace==0.2.0
|
| 128 |
+
- torch==2.13.0+cpu
|
| 129 |
+
- torch-geometric==2.8.0.post1
|
| 130 |
+
- torchmetrics==1.9.0
|
| 131 |
+
- tqdm==4.70.0
|
| 132 |
+
- typing-extensions==4.15.0
|
| 133 |
+
- urllib3==2.7.0
|
| 134 |
+
- xlsxwriter==3.2.9
|
| 135 |
+
- xxhash==3.8.1
|
| 136 |
+
- yarl==1.24.5
|
| 137 |
+
prefix: /home/ccel2026/miniconda3/envs/tace2
|
env_snapshots/tace2_pip_freeze.txt
ADDED
|
@@ -0,0 +1,73 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
aiohappyeyeballs==2.7.1
|
| 2 |
+
aiohttp==3.14.3
|
| 3 |
+
aiosignal==1.4.0
|
| 4 |
+
antlr4-python3-runtime==4.9.3
|
| 5 |
+
anyio==4.14.2
|
| 6 |
+
ase==3.29.0
|
| 7 |
+
ase_db_backends==0.11.0
|
| 8 |
+
attrs==26.1.0
|
| 9 |
+
cabarchive==0.2.5
|
| 10 |
+
catbench==1.1.3
|
| 11 |
+
certifi==2026.7.22
|
| 12 |
+
cffi==2.1.1
|
| 13 |
+
charset-normalizer==3.5.0
|
| 14 |
+
click==8.4.2
|
| 15 |
+
ConfigArgParse==1.7.5
|
| 16 |
+
contourpy==1.3.3
|
| 17 |
+
cryptography==50.0.0
|
| 18 |
+
cycler==0.12.1
|
| 19 |
+
e3nn==0.6.0
|
| 20 |
+
filelock==3.29.0
|
| 21 |
+
fonttools==4.63.0
|
| 22 |
+
frozenlist==1.8.0
|
| 23 |
+
fsspec==2026.4.0
|
| 24 |
+
h11==0.16.0
|
| 25 |
+
hf-xet==1.6.0
|
| 26 |
+
httpcore==1.0.9
|
| 27 |
+
httpx==0.28.1
|
| 28 |
+
huggingface_hub==1.27.0
|
| 29 |
+
hydra-core==1.3.5
|
| 30 |
+
idna==3.18
|
| 31 |
+
Jinja2==3.1.6
|
| 32 |
+
kiwisolver==1.5.0
|
| 33 |
+
lightning==2.6.5
|
| 34 |
+
lightning-utilities==0.15.3
|
| 35 |
+
lmdb==2.3.0
|
| 36 |
+
MarkupSafe==3.0.3
|
| 37 |
+
matplotlib==3.11.1
|
| 38 |
+
matscipy==1.2.0
|
| 39 |
+
mpmath==1.3.0
|
| 40 |
+
multidict==6.7.1
|
| 41 |
+
networkx==3.6.1
|
| 42 |
+
ninja==1.13.0
|
| 43 |
+
numpy==2.4.6
|
| 44 |
+
omegaconf==2.3.1
|
| 45 |
+
openequivariance==0.6.4
|
| 46 |
+
opt-einsum-fx==0.1.4
|
| 47 |
+
opt_einsum==3.4.0
|
| 48 |
+
packaging==26.2
|
| 49 |
+
pandas==3.0.5
|
| 50 |
+
pillow==12.3.0
|
| 51 |
+
propcache==0.5.2
|
| 52 |
+
psutil==7.2.2
|
| 53 |
+
psycopg2-binary==2.9.12
|
| 54 |
+
pycparser==3.0
|
| 55 |
+
PyMySQL==1.2.0
|
| 56 |
+
pyparsing==3.3.2
|
| 57 |
+
python-dateutil==2.9.0.post0
|
| 58 |
+
pytorch-lightning==2.6.5
|
| 59 |
+
PyYAML==6.0.3
|
| 60 |
+
requests==2.34.2
|
| 61 |
+
scipy==1.17.1
|
| 62 |
+
six==1.17.0
|
| 63 |
+
sympy==1.14.0
|
| 64 |
+
TACE @ git+https://github.com/xvzemin/tace@81f65a4c188bd09cec8d1419388f7afdcc1b6fd0
|
| 65 |
+
torch==2.13.0+cpu
|
| 66 |
+
torch-geometric==2.8.0.post1
|
| 67 |
+
torchmetrics==1.9.0
|
| 68 |
+
tqdm==4.70.0
|
| 69 |
+
typing_extensions==4.15.0
|
| 70 |
+
urllib3==2.7.0
|
| 71 |
+
xlsxwriter==3.2.9
|
| 72 |
+
xxhash==3.8.1
|
| 73 |
+
yarl==1.24.5
|