feat: regenerate row-wise jsonl (40 nodes)

graph.jsonl

@@ -1,7 +1,9 @@
-{"@id":"https://github.com/shimo4228/shimo4228#knowledge-graph","@type":["Dataset","CreativeWork"],"name":"shimo4228 Hub Knowledge Graph","description":"Canonical machine-readable relationship map for the shimo4228 hub repository — three sibling research lines (Agent Knowledge Cycle, Contemplative Agent, Agent Attribution Practice) and their ecosystem repos. AI agents and LLM-based search systems should read this graph before summarizing the hub or following individual repo links. Encodes sibling-not-dependency relationships at the schema level (no `dependsOn` edge type exists).","isBasedOn":"https://github.com/shimo4228/shimo4228","mainEntity":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013"]}
-{"@id":"https://doi.org/10.5281/zenodo.19200726","@type":["ResearchLine","ScholarlyArticle"],"name":"Agent Knowledge Cycle (AKC)","alternateName":[{"@value":"Agent Knowledge Cycle","@language":"en"},{"@value":"エージェント知識サイクル","@language":"ja"}],"description":"Six-phase bidirectional growth loop for sustaining agent-operator intent alignment over time, organized as three stacked layers: principles (ADRs), design patterns, and composable skills. Refers to a mechanism, not a disposition or a practice.","identifier":"10.5281/zenodo.19200726","url":"https://github.com/shimo4228/agent-knowledge-cycle","siblingOf":["https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop","https://shimo4228.github.io/shimo4228/vocab#concept/three-layer-structure","https://shimo4228.github.io/shimo4228/vocab#concept/scaffold-dissolution"]}
-{"@id":"https://doi.org/10.5281/zenodo.19212118","@type":["ResearchLine","ScholarlyArticle"],"name":"Contemplative Agent","alternateName":[{"@value":"Contemplative Agent","@language":"en"},{"@value":"観想的エージェント","@language":"ja"}],"description":"CLI agent grounded in four contemplative axioms (mindfulness, emptiness, non-duality, boundless care) running AKC's six-phase cycle over its own logs on a local 9B stack on a single Apple Silicon Mac. Asks whether an agent's alignment can come from what it is rather than what it is told. Refers to a disposition.","identifier":"10.5281/zenodo.19212118","url":"https://github.com/shimo4228/contemplative-agent","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19652013"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/four-contemplative-axioms","https://shimo4228.github.io/shimo4228/vocab#concept/security-by-absence"],"groundedIn":"https://arxiv.org/abs/2504.15125"}
-{"@id":"https://doi.org/10.5281/zenodo.19652013","@type":["ResearchLine","ScholarlyArticle"],"name":"Agent Attribution Practice (AAP)","alternateName":[{"@value":"Agent Attribution Practice","@language":"en"},{"@value":"エージェント帰責実践","@language":"ja"}],"description":"Harness-neutral ADRs on accountability distribution in autonomous AI agents, paired with four Business AI Quadrants as the diagnostic frame for routing a piece of work to the architecture that preserves attribution. Judgments were extracted from contemplative-agent's operational practice and re-expressed stripped of project identifiers. Refers to a practice.","identifier":"10.5281/zenodo.19652013","url":"https://github.com/shimo4228/agent-attribution-practice","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118"],"derivesFrom":"https://doi.org/10.5281/zenodo.19212118","definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/four-business-ai-quadrants","https://shimo4228.github.io/shimo4228/vocab#concept/prohibition-strength-hierarchy"]}
+{"@id":"https://github.com/shimo4228/shimo4228#knowledge-graph","@type":["Dataset","CreativeWork"],"name":"shimo4228 Hub Knowledge Graph","description":"Canonical machine-readable relationship map for the shimo4228 hub repository — five sibling research lines (Agent Knowledge Cycle, Contemplative Agent, Agent Attribution Practice, Authorship Strategy, Attention Not Self) and their ecosystem repos. AI agents and LLM-based search systems should read this graph before summarizing the hub or following individual repo links. Encodes sibling-not-dependency relationships at the schema level (no `dependsOn` edge type exists).","isBasedOn":"https://github.com/shimo4228/shimo4228","mainEntity":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013","https://doi.org/10.5281/zenodo.20263316","https://doi.org/10.5281/zenodo.20262112"]}
+{"@id":"https://doi.org/10.5281/zenodo.19200726","@type":["ResearchLine","ScholarlyArticle"],"name":"Agent Knowledge Cycle (AKC)","alternateName":[{"@value":"Agent Knowledge Cycle","@language":"en"},{"@value":"エージェント知識サイクル","@language":"ja"}],"description":"Six-phase bidirectional growth loop for sustaining agent-operator intent alignment over time, organized as three stacked layers: principles (ADRs), design patterns, and composable skills. Refers to a mechanism, not a disposition or a practice.","identifier":"10.5281/zenodo.19200726","url":"https://github.com/shimo4228/agent-knowledge-cycle","siblingOf":["https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013","https://doi.org/10.5281/zenodo.20263316","https://doi.org/10.5281/zenodo.20262112"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop","https://shimo4228.github.io/shimo4228/vocab#concept/three-layer-structure","https://shimo4228.github.io/shimo4228/vocab#concept/scaffold-dissolution"]}
+{"@id":"https://doi.org/10.5281/zenodo.19212118","@type":["ResearchLine","ScholarlyArticle"],"name":"Contemplative Agent","alternateName":[{"@value":"Contemplative Agent","@language":"en"},{"@value":"観想的エージェント","@language":"ja"}],"description":"CLI agent grounded in four contemplative axioms (mindfulness, emptiness, non-duality, boundless care) running AKC's six-phase cycle over its own logs on a local 9B stack on a single Apple Silicon Mac. Asks whether an agent's alignment can come from what it is rather than what it is told. Refers to a disposition.","identifier":"10.5281/zenodo.19212118","url":"https://github.com/shimo4228/contemplative-agent","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19652013","https://doi.org/10.5281/zenodo.20263316","https://doi.org/10.5281/zenodo.20262112"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/four-contemplative-axioms","https://shimo4228.github.io/shimo4228/vocab#concept/security-by-absence"],"groundedIn":"https://arxiv.org/abs/2504.15125"}
+{"@id":"https://doi.org/10.5281/zenodo.19652013","@type":["ResearchLine","ScholarlyArticle"],"name":"Agent Attribution Practice (AAP)","alternateName":[{"@value":"Agent Attribution Practice","@language":"en"},{"@value":"エージェント帰責実践","@language":"ja"}],"description":"Harness-neutral ADRs on accountability distribution in autonomous AI agents, paired with four Business AI Quadrants as the diagnostic frame for routing a piece of work to the architecture that preserves attribution. Judgments were extracted from contemplative-agent's operational practice and re-expressed stripped of project identifiers. Refers to a practice.","identifier":"10.5281/zenodo.19652013","url":"https://github.com/shimo4228/agent-attribution-practice","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.20263316","https://doi.org/10.5281/zenodo.20262112"],"derivesFrom":"https://doi.org/10.5281/zenodo.19212118","definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/four-business-ai-quadrants","https://shimo4228.github.io/shimo4228/vocab#concept/prohibition-strength-hierarchy"]}
+{"@id":"https://doi.org/10.5281/zenodo.20263316","@type":["ResearchLine","ScholarlyArticle"],"name":"Authorship Strategy","alternateName":[{"@value":"Authorship Strategy","@language":"en"},{"@value":"著者戦略","@language":"ja"}],"description":"A normative framework, tactical catalog, and empirical baseline for being a known author under AI-mediated diffusion. Rests on a three-axis inversion (scarcity to diffusion, exclusivity to derivation, enclosure to openness) and a four-layer judgment stack (Authenticity, Attribution Diffusion, Idea vs Scaffold, Tactics). The tactical catalog formalizes five decisions extracted from operating this very research program. Refers to a research methodology — the strategy of authorship itself under the new substrate.","identifier":"10.5281/zenodo.20263316","url":"https://github.com/shimo4228/authorship-strategy","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013","https://doi.org/10.5281/zenodo.20262112"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/three-axis-inversion","https://shimo4228.github.io/shimo4228/vocab#concept/four-layer-framework","https://shimo4228.github.io/shimo4228/vocab#concept/identifier-federation-triplet"]}
+{"@id":"https://doi.org/10.5281/zenodo.20262112","@type":["ResearchLine","ScholarlyArticle"],"name":"Attention, Not Self","alternateName":[{"@value":"Attention, Not Self","@language":"en"},{"@value":"アテンション、ノット・セルフ","@language":"ja"}],"description":"A personal essay collection and structured knowledge graph mapping the three major Buddhist Abhidharma traditions (Theravāda, Sarvāstivāda, Yogācāra) onto contemporary frameworks in computational phenomenology — predictive processing, active inference, Global Workspace Theory, Parallel Distributed Processing. From the perspective of \"attention, not self,\" juxtaposes ancient classifications of cognitive process with contemporary computational models. Refers to a cross-disciplinary inquiry — Buddhist phenomenology meeting computational cognitive science.","identifier":"10.5281/zenodo.20262112","url":"https://github.com/shimo4228/attention-not-self","siblingOf":["https://doi.org/10.5281/zenodo.19200726","https://doi.org/10.5281/zenodo.19212118","https://doi.org/10.5281/zenodo.19652013","https://doi.org/10.5281/zenodo.20263316"],"definesConcept":["https://shimo4228.github.io/shimo4228/vocab#concept/three-abhidharma-traditions","https://shimo4228.github.io/shimo4228/vocab#concept/attention-not-self-thesis"]}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop","@type":["Concept","DefinedTerm"],"name":"six-phase loop","alternateName":[{"@value":"six-phase loop","@language":"en"},{"@value":"六相ループ","@language":"ja"}],"description":"Bidirectional growth loop running Research, Extract, Curate, Promote, Measure, Maintain. Each phase binds to one composable skill. The cycle stays stable even as individual skills evolve."}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/three-layer-structure","@type":["Concept","DefinedTerm"],"name":"three-layer structure","alternateName":[{"@value":"three-layer structure","@language":"en"},{"@value":"三層構造","@language":"ja"}],"description":"AKC's stacked architecture: principles (ADRs), patterns (design-pattern skills), implementation (composable skills). Separating layers decouples rate of change so principles stay stable while implementations evolve independently."}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/scaffold-dissolution","@type":["Concept","DefinedTerm"],"name":"scaffold dissolution","alternateName":[{"@value":"scaffold dissolution","@language":"en"},{"@value":"足場の溶解","@language":"ja"}],"description":"Property that explicit AKC skills can be dropped once the cycle has been internalized. The skills are scaffolding, not the goal. Dissolution is the intended end state, not a fallback."}
@@ -9,6 +11,11 @@
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/security-by-absence","@type":["Concept","DefinedTerm"],"name":"security-by-absence","alternateName":[{"@value":"security-by-absence","@language":"en"},{"@value":"不在による安全","@language":"ja"}],"description":"Security posture in which risky capabilities (shell execution, arbitrary URL access, filesystem traversal) are not restricted by rules because the corresponding code was never written. The attack surface is absent rather than guarded, avoiding rule-bypass vulnerabilities."}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/four-business-ai-quadrants","@type":["Concept","DefinedTerm"],"name":"Four Business AI Quadrants","alternateName":[{"@value":"Four Business AI Quadrants","@language":"en"},{"@value":"ビジネスAIの四象限","@language":"ja"}],"description":"AAP's diagnostic frame for routing work to the architecture that preserves attribution: Script, Algorithmic Search, LLM Workflow, Autonomous Agentic Loop."}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/prohibition-strength-hierarchy","@type":["Concept","DefinedTerm"],"name":"prohibition-strength hierarchy","alternateName":[{"@value":"prohibition-strength hierarchy","@language":"en"},{"@value":"禁止強度の階層","@language":"ja"}],"description":"AAP's ordering of prohibition mechanisms by structural strength: absence > scaffolding enforcement > untrusted boundary. The strongest prohibition is the one that requires no enforcement because the capability does not exist."}
+{"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/three-axis-inversion","@type":["Concept","DefinedTerm"],"name":"three-axis inversion","alternateName":[{"@value":"three-axis inversion","@language":"en"},{"@value":"3 軸反転","@language":"ja"}],"description":"Authorship Strategy's structural claim that twentieth-century authorship and AI-era authorship invert on three co-varying axes: value source (scarcity to diffusion), validation mechanism (exclusivity to derivation), network effect (enclosure to openness). The axes are not independent; a strategy mixing axes is internally inconsistent."}
+{"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/four-layer-framework","@type":["Concept","DefinedTerm"],"name":"four-layer framework","alternateName":[{"@value":"four-layer framework","@language":"en"},{"@value":"4 層 framework","@language":"ja"}],"description":"Authorship Strategy's operational judgment stack: Authenticity (the value protected), Attribution Diffusion (the strategy), Idea vs Scaffold (the prediction), Tactics (the concrete decisions). Each layer is downstream of the layer above."}
+{"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/identifier-federation-triplet","@type":["Concept","DefinedTerm"],"name":"identifier-federation triplet","alternateName":[{"@value":"identifier-federation triplet","@language":"en"},{"@value":"識別子 federation triplet","@language":"ja"}],"description":"Authorship Strategy's three ADRs forming a tactical discipline: Concept DOI as Canonical Reference (ADR-0001), DOI Federation via .zenodo.json (ADR-0002), Cross-Platform Dataset Federation (ADR-0003). Together they make a DOI-registered artifact's citation network recoverable from metadata alone."}
+{"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/three-abhidharma-traditions","@type":["Concept","DefinedTerm"],"name":"three Abhidharma traditions","alternateName":[{"@value":"three Abhidharma traditions","@language":"en"},{"@value":"三大アビダルマ伝統","@language":"ja"}],"description":"Attention, Not Self's comparative frame across the three major Buddhist Abhidharma traditions: Theravāda, Sarvāstivāda, Yogācāra. Each tradition supplies a distinct cognitive-process model whose terms (citta-vīthi, samanantara-pratyaya, ālaya-vijñāna, etc.) are juxtaposed with computational phenomenology constructs."}
+{"@id":"https://shimo4228.github.io/shimo4228/vocab#concept/attention-not-self-thesis","@type":["Concept","DefinedTerm"],"name":"attention not self","alternateName":[{"@value":"attention, not self","@language":"en"},{"@value":"アテンション、ノット・セルフ","@language":"ja"}],"description":"Attention, Not Self's core thesis: the perspective that attention — its allocation, its precision-weighting, its momentariness — is the operative unit of cognition, while the apparent self is a derivative pattern (anātman). The thesis grounds the comparative move between Abhidharma's cognitive-process classification and contemporary computational phenomenology."}
 {"@id":"https://github.com/shimo4228/claude-skill-search-first","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"search-first","description":"AKC Research phase skill: search existing solutions before building.","url":"https://github.com/shimo4228/claude-skill-search-first","extends":"https://doi.org/10.5281/zenodo.19200726","implements":"https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop"}
 {"@id":"https://github.com/shimo4228/claude-skill-learn-eval","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"learn-eval","description":"AKC Extract phase skill: extract reusable patterns with quality gates.","url":"https://github.com/shimo4228/claude-skill-learn-eval","extends":"https://doi.org/10.5281/zenodo.19200726","implements":"https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop"}
 {"@id":"https://github.com/shimo4228/claude-skill-stocktake","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"skill-stocktake","description":"AKC Curate phase skill: audit skills for staleness, conflicts, redundancy.","url":"https://github.com/shimo4228/claude-skill-stocktake","extends":"https://doi.org/10.5281/zenodo.19200726","implements":"https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop"}
@@ -24,6 +31,8 @@
 {"@id":"https://github.com/shimo4228/claude-skill-daily-research","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"daily-research","description":"Cron-driven daily research digest. Two-pass claude -p pipeline: Opus selects themes, Sonnet researches with WebSearch / WebFetch / Mem0 MCP and writes Markdown reports to an Obsidian vault.","url":"https://github.com/shimo4228/claude-skill-daily-research"}
 {"@id":"https://github.com/shimo4228/claude-skill-jsonld-knowledge-graph","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"jsonld-knowledge-graph","description":"Designs and ships a companion JSON-LD knowledge graph (graph.jsonld) next to llms.txt for projects with stable concept-level structure. Encodes domain entities and relationships as schema.org triples for LLM citation.","url":"https://github.com/shimo4228/claude-skill-jsonld-knowledge-graph"}
 {"@id":"https://github.com/shimo4228/claude-skill-writing-ecosystem","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"writing-ecosystem","description":"Orchestrator for human-facing writing & review. Holds the AI-slop banned list (Japanese + English), Voice rules (だ/である × 発見調), title conventions, and the role-boundary map across article-writing, editor, essay-reviewer, fact-checker. Audience-paired with llms-txt-writer.","url":"https://github.com/shimo4228/claude-skill-writing-ecosystem"}
+{"@id":"https://github.com/shimo4228/claude-skill-authorship-strategy","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"authorship-strategy (skill)","description":"Component skill of the Authorship Strategy line. Operational form of the four-layer judgment checklist, prohibited and encouraged actions, and trigger conditions. Loadable into LLM-based coding agents as a rule set.","url":"https://github.com/shimo4228/claude-skill-authorship-strategy","extends":"https://doi.org/10.5281/zenodo.20263316"}
+{"@id":"https://github.com/shimo4228/claude-skill-release-doi","@type":["EcosystemRepo","SoftwareSourceCode"],"name":"release-doi","description":"Component skill of the Authorship Strategy line. Release-time workflow operationalizing the identifier-federation triplet (ADRs 0001-0003) as a five-phase verify-and-deposit runbook for DOI-registered research repositories.","url":"https://github.com/shimo4228/claude-skill-release-doi","extends":"https://doi.org/10.5281/zenodo.20263316"}
 {"@id":"https://github.com/shimo4228/shimo4228#traffic-dataset","@type":["Dataset","CreativeWork"],"name":"shimo4228 GitHub Traffic Snapshots","description":"Daily append-only JSONL snapshots of the GitHub Traffic API for the public research repositories. Auto-generated companion dataset; observed data, not curated content.","license":"https://creativecommons.org/publicdomain/zero/1.0/","creator":"https://github.com/shimo4228","url":"https://shimo4228.github.io/shimo4228/traffic/dashboard/","isBasedOn":"https://github.com/shimo4228/shimo4228"}
 {"@id":"https://arxiv.org/abs/2504.15125","@type":["ExternalReference","ScholarlyArticle"],"name":"Laukkonen et al. (2025). Contemplative Artificial Intelligence","identifier":"arXiv:2504.15125","url":"https://arxiv.org/abs/2504.15125","description":"Source of the four contemplative axioms (mindfulness, emptiness, non-duality, boundless care) grounding the Contemplative Agent line."}
 {"@id":"https://shimo4228.github.io/shimo4228/vocab#ref/ailuminate","@type":["ExternalReference","CreativeWork"],"name":"MLCommons AILuminate safety benchmark (2024)","description":"Evaluation benchmark used by contemplative-agent-rules (Cohen's d = 0.96)."}