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d_bash_1200
--- +++ @@ -6,10 +6,15 @@ git checkout master yarn build-prod git add -A - git commit -m ":rocket:" + + TAG=$(egrep '"version": "([0-9]+\.[0-9]+\.[0-9]+"),' package.json | egrep -o '[0-9]+\.[0-9]+\.[0-9]+') + + git commit -m ":rocket: v$TAG" + git tag -a "v$TAG" -m "v$TAG" # push to ...
bash
d_bash_1201
--- +++ @@ -16,6 +16,7 @@ # Sleep a bit to be sure that node2 is up and ready to answer us #sleep 120 +ip addr show opsbro gossip detect --auto-join cat /var/log/opsbro/gossip.log @@ -24,7 +25,7 @@ if [ $NB_MEMBERS != 2 ]; then echo "BAD number of members: $NB_MEMBERS" - + opsbro gossip members e...
bash
d_bash_1202
--- +++ @@ -5,5 +5,6 @@ if [ "${CODESPACES:-}" = "true" ]; then code \ --install-extension eamodio.gitlens \ - --install-extension flesler.url-encode + --install-extension flesler.url-encode \ + >&/dev/null fi
bash
d_bash_1203
--- +++ @@ -1,9 +1,23 @@ #!/bin/bash +dependencies=(git python3 python3-dev python3-setuptools) +proc_serve_user="procserve" +install_dir="/opt" #Update package repos and install dependencies apt-get update -dependencies=(git python3 python3-dev python3-setuptools) for dep in "${dependencies[@]}" do apt-g...
bash
d_bash_1204
--- +++ @@ -5,7 +5,6 @@ export GEM_HOME=$RUN_DIR/.beehive_gem_home export GEM_PATH=$RUN_DIR/.beehive_gem_home:`gem env path` export PATH=$RUN_DIR/.beehive_gem_home/bin:$PATH - echo $$ > $PIDFILE @@ -18,6 +17,6 @@ echo "Using start.sh file" exec /bin/sh start.sh else - echo "./script/server -p $PORT" -...
bash
d_bash_1205
--- +++ @@ -7,7 +7,7 @@ ./$appName > /dev/null & sdl_pid=$! echo "SDL pid "$sdl_pid -sleep 3 +sleep 10 test -e /proc/$sdl_pid || exit 1 cd $dirATF echo $sdl_pid > sdl.pid
bash
d_bash_1206
--- +++ @@ -8,6 +8,9 @@ neutron quota-update --tenant_id $PROJECTID --subnet 10000 openstack flavor create --ram 64 --disk 0 --vcpus 1 --id 27 ovntenant +# Add a SG rule to allow ping +neutron security-group-rule-create --direction ingress --protocol icmp default + OVN_TENANT=$(openstack project show -f value -c...
bash
d_bash_1207
--- +++ @@ -17,8 +17,8 @@ fi echo -e "\n" - echo th dataset_creator.lua -c "$dir/labels.csv" -d "$dir" "${dir}.t7" | tee $temp - th dataset_creator.lua -c "$dir/labels.csv" -d "$dir" "${dir}.t7" | tee $temp + echo th dataset_creator.lua --csv "$dir/labels.csv" --dir "$dir" "${dir}.t7" | tee $temp...
bash
d_bash_1208
--- +++ @@ -1,4 +1,4 @@ -#!/bin/sh +#!/bin/bash # # Script to perform a release of vector-web. #
bash
d_bash_1209
--- +++ @@ -18,7 +18,12 @@ # limitations under the License. ################################################################################ -echo "Starting Apache Karaf" -exec $KARAF_HOME/bin/karaf +if [ "$1" = "server" ]; then + echo "Starting Apache Karaf (server mode)" + exec $KARAF_HOME/bin/karaf server +e...
bash
d_bash_1210
--- +++ @@ -11,3 +11,13 @@ mkdir -p "${LIB_DIR}" cp -R "${BUILD_DIR}/Paste/paste" "${LIB_DIR}" cp -R "${BUILD_DIR}/youtube-dl/youtube_dl" "${LIB_DIR}" + +( + cd "${LIB_DIR}/youtube_dl" + echo 'Patching youtube_dl' + sed 's/import fcntl/# Removed fcntl import/g' utils.py > utils.py.temp + mv utils.py.te...
bash
d_bash_1211
--- +++ @@ -21,8 +21,10 @@ version=`grep '^VERSION' namebench-$$/libnamebench/version.py | cut -d\' -f2` mv namebench-$$ namebench-$version cd namebench-$version +svn log > ChangeLog.txt & ./namebench.py -q5 -j50 -x -o /tmp/$$.csv -O 8.8.8.8 -svn log > ChangeLog.txt +echo "Waiting for changelog" +wait find . -na...
bash
d_bash_1212
--- +++ @@ -18,6 +18,7 @@ # build libpatlms cd libpatlms +./autogen.sh ./configure --prefix=${PATLMS_INSTALL_DIR} make make install @@ -30,6 +31,7 @@ # build server cd ${START_DIR}/server +./autogen.sh ./configure --prefix=${SERVER_INSTALL_DIR} make make install @@ -37,6 +39,7 @@ # build agent cd ${...
bash
d_bash_1213
--- +++ @@ -3,10 +3,23 @@ # Path # ------------------------------------------------------------------------- - PATH=$DOTFILES/bin +# Dotfiles binaries. +PATH=$DOTFILES/bin + +# Development binaries. PATH=$PATH:~/dev/bin -PATH=$PATH:$GOPATH/bin -PATH=$PATH:$GOROOT/bin -PATH=$PATH:/usr/local/bin:/usr/bin:/bin...
bash
d_bash_1214
--- +++ @@ -1,35 +1,39 @@ #!/bin/sh set -e -# ruby 2.2.2+: rack activesupport -# ruby 2.0+: mime-types -# (jruby 1.7 is ruby 1.9) -extras="$(ruby -e ' - rubyVersion = Gem::Version.new(RUBY_VERSION) - puts ( - ( - rubyVersion >= Gem::Version.new("2.2.2") ? [ - "rack", - "activesupport", - ] : [] - ) + ...
bash
d_bash_1215
--- +++ @@ -2,6 +2,7 @@ cd /srv/servermon/servermon sed -i -e 's/managed = False/managed = True/' puppet/models.py -./manage.py syncdb --migrate --noinput +./manage.py syncdb --noinput +./manage.py migrate --noinput # And now undo it sed -i -e 's/managed = True/managed = False/' puppet/models.py
bash
d_bash_1216
--- +++ @@ -1,4 +1,5 @@ rm -r ./build/* grunt find ./build/ -type f -exec gzip "{}" \; -exec mv "{}.gz" "{}" \; -aws s3 sync ./build/ s3://fucking-eu-cookies/ --exclude ".gitignore" --cache-control "public, max-age=604800" --content-encoding gzip --delete +aws s3 sync ./build/ s3://fucking-eu-cookies/ --exclude '*...
bash
d_bash_1217
--- +++ @@ -3,11 +3,18 @@ INITIAL_DIR=`pwd` SOURCE_DIR=$(dirname "$0") BUILD_DIR=build +UNIX_NAME=`uname` # Default 'make' to a number of jobs equal to CPU threads, but lower it # if the memory available is too low, to avoid a lock up (e.g for RPi) NUM_JOBS=`nproc` -MEM_AVAIL=`grep MemAvailable /proc/meminfo ...
bash
d_bash_1218
--- +++ @@ -20,7 +20,7 @@ alias docker-remove-none-images="docker rmi -f $(docker images | grep "<none>" | awk "{print \$3}")" # ZSH -alias reload="source ~/.zshrc" +alias reload="source $HOME/.zshrc" # OS alias l="ls -lah" @@ -39,4 +39,4 @@ alias yadev="yarn add --dev" # Dev -alias dev="cd ~/Developer" +...
bash
d_bash_1219
--- +++ @@ -7,5 +7,5 @@ if ! grep -q "/usr/local/bin/fish" /etc/shells; then echo "/usr/local/bin/fish" | sudo tee -a /etc/shells - chsh -s "/usr/local/bin/fish" fi +chsh -s "/usr/local/bin/fish"
bash
d_bash_1220
--- +++ @@ -15,7 +15,6 @@ emmet fold-comments highlight-selected - jsdoc todo-show editorconfig )
bash
d_bash_1221
--- +++ @@ -11,7 +11,7 @@ INSTALLER="brew install" elif [[ "$(uname)" == "Linux"* ]]; then echo "--> Sleep to wait nix-env ready" - sleep 180 + sleep 300 # Source /etc/profile, it will set up nix, shadowenv and other goodies . /etc/profile
bash
d_bash_1222
--- +++ @@ -12,6 +12,9 @@ chmod +x $SWAGGER fi +# Remove old stuff. +(cd $DIR/; rm -rf models restapi/operations/) + (cd $DIR/..; $SWAGGER generate server --name=weaviate --spec=openapi-specs/schema.json --default-scheme=https) (cd $DIR/..; $SWAGGER generate client --spec=openapi-specs/schema.json --default-s...
bash
d_bash_1223
--- +++ @@ -2,7 +2,7 @@ set -ev -mysql -e 'CREATE DATABASE IF NOT EXISTS mondrian_test;' +mysql -e 'CREATE DATABASE IF NOT EXISTS mondrian_test DEFAULT CHARACTER SET utf8;' mysql -e "GRANT ALL PRIVILEGES ON mondrian_test.* TO 'mondrian_test'@'localhost' IDENTIFIED BY 'mondrian_test';" psql -c "CREATE ROLE mo...
bash
d_bash_1224
--- +++ @@ -10,8 +10,8 @@ echo "Creating admin user" python manage.py shell -c "from django.contrib.auth.models import User; User.objects.filter(email='admin@humanitec.com').delete(); User.objects.create_superuser('admin', 'admin@humanitec.com', 'admin')" -echo "Loading config fixtures" -python manage.py loaddata...
bash
d_bash_1225
--- +++ @@ -5,5 +5,17 @@ sudo -u nsd HOME=/opt/local/etc/nsd nsd-control-setup rm /opt/local/etc/nsd/.rnd +# Create nsd_listen.conf file with all ip addresses managed +# by vmadm sdc:nics / mdata +NSD_LISTEN_CONF='/opt/local/etc/nsd/nsd_listen.conf' +echo > ${NSD_LISTEN_CONF} +if mdata-get sdc:nics 1>/dev/null 2>...
bash
d_bash_1226
--- +++ @@ -1,6 +1,6 @@ #!/bin/bash -IMAGE_VERSION='0.2.4' +IMAGE_VERSION='0.2.5' docker rmi -f jorvis/gales-gce docker build --no-cache -t jorvis/gales-gce:latest -t jorvis/gales-gce:${IMAGE_VERSION} .
bash
d_bash_1227
--- +++ @@ -5,8 +5,8 @@ rm -rf $CHECKOUT_DIR git clone https://github.com/creationix/nvm.git $CHECKOUT_DIR cd nvm -VERSION=`git describe --abbrev=0 --tags` -git checkout master -git reset --hard $VERSION +TAG=`git describe --abbrev=0 --tags` +VERSION=`echo $TAG |sed 's/^[^0-9]*//'` +git reset --hard $TAG cd .. -f...
bash
d_bash_1228
--- +++ @@ -4,6 +4,7 @@ echo "* ruby 1.8.7-p249 build *" && echo "*************************************************************************************************" && echo "" && +rm Gemfile.lock && source /usr/local/rvm/scripts/rvm && rvm u...
bash
d_bash_1229
--- +++ @@ -1,3 +1,5 @@ +sudo apt-get update + sudo apt-get install -qq libgeos++-dev libproj-dev build-essential liblzo2-dev liblzma-dev zlib1g-dev libprotobuf-c0-dev postgresql-contrib-9.3 postgresql-9.3-postgis-2.1-scripts libprotobuf-c0 zlib1g # Se placer dans le dossier /tmp
bash
d_bash_1230
--- +++ @@ -11,6 +11,9 @@ # Assume we are running in the chef-bcpc directory +knife actor map +knife group add actor admins $(hostname -f) + # Are we running under Vagrant? If so, jump through some extra hoops. if [[ -d /home/vagrant ]]; then knife bootstrap -E $2 $1 -i /chef-bcpc-host/vbox/insecure_privat...
bash
d_bash_1231
--- +++ @@ -38,3 +38,11 @@ fi open "http://localhost:${PORT}" && python -m SimpleHTTPServer $PORT } + +dockerImages() { + if [ $# -eq 1 ]; then + docker images | grep "$1" | awk '{print $1 ":" $2}'; + else + docker images | awk '{print $1 ":" $2}'; + fi +}
bash
d_bash_1232
--- +++ @@ -16,15 +16,19 @@ [ $LM == nolm ] && COMMON_CMD="--char-discount=0.1" [ $LM == nolm ] && COMMON_LM_CONF="" - [ $LM == trigram ] && COMMON_LM_CONF="$COMMON_LM_CONF net.lm.path 'lms/wsj_trigram_no_initial_eos/LG_pushed_withsyms.fst'" + if [ $LM == lm ] + then + LM_PATH=${LM_PATH:=l...
bash
d_bash_1233
--- +++ @@ -1,2 +1,4 @@ #!/bin/sh +# Things to do after doing a clean SVN update to add the proper files. +ln -vfs CHANGES NEWS autoreconf -i -s
bash
d_bash_1234
--- +++ @@ -12,7 +12,7 @@ do if [ $redirected = N ]; then prove -l tests/unit/sources/${site}_valid_lines.t - prove -l tests/in_progress/${site}/ + prove -l tests/integration/in_progress/${site}/ fi done ) < sites.csv
bash
d_bash_1235
--- +++ @@ -1,9 +1,9 @@ -#PKGURL=https://bitbucket.org/libgd/gd-libgd/downloads/libgd-2.1.1.tar.gz -PKGURL=http://ecem.ece.ubc.ca/~cpetersen/libgd-2.1.1.tar.gz +PKGURL=https://github.com/libgd/libgd/archive/gd-2.1.1.tar.gz +PKGHASH=b089ee7fc0b47b8aa4c2c70087506806637f03be +package_download $PKGURL $PKGHASH -PKGHASH...
bash
d_bash_1236
--- +++ @@ -28,6 +28,10 @@ clean_site_name=$(slug $site_name) site_id=$(get_site_id $clean_site_name) -echo "deleting site" +if [ -z "$site_id" ]; then + echo "site already deleted" +else + echo "deleting site" -netlify sites:delete --force "${site_id}" + netlify sites:delete --force "${site_id}" +fi
bash
d_bash_1237
--- +++ @@ -19,3 +19,14 @@ service docker start echo "==> Enabling docker to start on reboot" chkconfig docker on + +curl -L https://github.com/docker/compose/releases/download/1.6.0/docker-compose-`uname -s`-`uname -m` > /usr/local/bin/docker-compose +chmod +x /usr/local/bin/docker-compose +ln -s /usr/local/bin/d...
bash
d_bash_1238
--- +++ @@ -1,4 +1,7 @@ #!/bin/bash +# +# Using git-subsplit +# https://github.com/dflydev/git-subsplit GIT_SUBSPLIT=$(pwd)/$(dirname $0)/git-subsplit.sh
bash
d_bash_1239
--- +++ @@ -20,12 +20,6 @@ cmd="curl --silent -X GET -H 'content-type: application/json' -H 'fog-user-token: ${testServerUserToken}' -H 'fog-api-token: ${testServerApiToken}' http://${testServerIP}/fog/task/active -d '{\"hostID\": [${hostID}]}'" result=$(eval $cmd) -echo -echo -echo "$cmd" -echo -echo - echo $re...
bash
d_bash_1240
--- +++ @@ -14,7 +14,7 @@ # Get documentation templates and assets if [[ ! -d zf-mkdoc-theme ]];then - wget -O zf-mkdoc-theme.tgz https://github.com/weierophinney/zf-mkdoc-theme/archive/0.1.2.tar.gz ; + wget -O zf-mkdoc-theme.tgz https://github.com/weierophinney/zf-mkdoc-theme/archive/0.1.3.tar.gz ; mk...
bash
d_bash_1241
--- +++ @@ -4,7 +4,7 @@ printf "\n\033[1m\033[34m%s\033[0m\n\n" "[macos-confs] ${1}…" } -function install_powerline_fonts() { +function install_powerline() { pip install --upgrade powerline-shell }
bash
d_bash_1242
--- +++ @@ -1,12 +1,21 @@ #! /usr/bin/env bash set -eu + + +##Parse long and short OPTIONS +OPTIONS=$(getopt -o hn: -l name:,os:,help -- "$@") + +if [ $? != 0 ]; then + echo "Failed to parse arguments." + exit 1 +fi # Call yourself with -h if no arguments [[ -z $@ ]] && ./$0 -h && exit 1 -while [[ $# -g...
bash
d_bash_1243
--- +++ @@ -12,6 +12,7 @@ brew install python@2 pip2 install --upgrade setuptools pip2 install --upgrade pip + pip2 install --upgrade wheel pip2 install --upgrade virtualenv virtualenv venv -p python2 source venv/bin/activate @@ ...
bash
d_bash_1244
--- +++ @@ -1,9 +1,9 @@ #!/bin/sh # some package -sudo yum install java -sudo yum install openssl -sudo yum install openssl-devel +sudo yum -y install java +sudo yum -y install openssl +sudo yum -y install openssl-devel # Elasticsearch wget https://download.elastic.co/elasticsearch/elasticsearch/elasticsearch...
bash
d_bash_1245
--- +++ @@ -2,10 +2,10 @@ cd third_party_sources git clone --branch v1.2.9 https://github.com/madler/zlib.git -wget https://dl.bintray.com/boostorg/release/1.75.0/source/boost_1_75_0.tar.gz -tar zxvf boost_1_75_0.tar.gz -mv boost_1_75_0 boost -rm boost_1_75_0.tar.gz +wget https://dl.bintray.com/boostorg/release/1...
bash
d_bash_1246
--- +++ @@ -1,9 +1,14 @@ #!/bin/bash # the line run in the mask function can be substituted for your own masking software. In this example it calls a SQL script +# You need to validate all the variables +# Is your ORACLE_SID the one called by workflow? In this example it is called: unmasked +# Is your ORACLE...
bash
d_bash_1247
--- +++ @@ -5,4 +5,6 @@ # # autor: Marcelo dos Santos # -git clone https://github.com/rakanalh/emacs-dashboard ~/.emacs.d/temp/dashboard +mkdir temp +git clone https://github.com/vermiculus/magithub ~/.emacs.d/temp/magithub +git clone https://github.com/zonuexe/right-click-context ~/.emacs.d/temp/right-click-conte...
bash
d_bash_1248
--- +++ @@ -1,6 +1,11 @@ #!/bin/sh set -e -x + +# Try to merge master into the current branch, and abort if it doesn't exit +# cleanly (ie there are conflicts). This will be a noop if the current branch +# is master. +git merge --no-commit origin/master || git merge --abort bundle install --deployment
bash
d_bash_1249
--- +++ @@ -1 +1,6 @@ -PATH=~/bin:~/.local/bin:$PATH +if [ -d ~/bin ]; then + PATH=$PATH:~/bin +fi +if [ -d ~/.local/bin ]; then + PATH=$PATH:~/.local/bin +fi
bash
d_bash_1250
--- +++ @@ -5,8 +5,8 @@ cd $FOLDER -# Lock and Wake Up -/usr/bin/powerd_test -p >/dev/null +# Wake Up +lipc-set-prop com.lab126.powerd wakeUp 1 sleep 10 @@ -19,7 +19,7 @@ wget http://cn-vpn.grisge.info/weather/weather.png -O $FOLDER/$FILE # Lock screen -/usr/bin/powerd_test -h >/dev/null +/usr/bin/power...
bash
d_bash_1251
--- +++ @@ -3,8 +3,19 @@ VERSION_MAJOR=0 VERSION_MINOR=1 -DIALOG="whiptail" +DIALOG="$(which dialog 2>/dev/null)" +if [ -z "$DIALOG" ]; then + DIALOG="$(which whiptail 2>/dev/null)" +fi + +if [ -z "$DIALOG" ]; then + echo "Neither dialog or whiptail found." + exit -1 +fi + +echo $DIALOG +exit 0 function dlg {...
bash
d_bash_1252
--- +++ @@ -1,5 +1,8 @@ # set fish as default shell -chsh -s /usr/bin/fish +if ! fgrep -q '/usr/local/bin/fish' /etc/shells; then + echo '/usr/local/bin/fish' | sudo tee -a /etc/shells +fi +chsh -s /usr/local/bin/fish # install oh-my-fish curl -L https://github.com/oh-my-fish/oh-my-fish/raw/master/bin/install |...
bash
d_bash_1253
--- +++ @@ -27,7 +27,7 @@ function monitor_stop { if [ ! -z "$MONITOR_PID" ]; then - kill $MONITOR_PID + kill $MONITOR_PID || true fi }
bash
d_bash_1254
--- +++ @@ -3,10 +3,6 @@ set -euo pipefail export MSYS2_FC_CACHE_SKIP=1 - -cp /etc/pacman.d/mirrorlist.mingw64 /etc/pacman.d/mirrorlist.backup -rankmirrors -r mingw64 -v /etc/pacman.d/mirrorlist.backup > /etc/pacman.d/mirrorlist.mingw64 -cat /etc/pacman.d/mirrorlist.mingw64 pacman --noconfirm -Suy
bash
d_bash_1255
--- +++ @@ -12,6 +12,7 @@ crashplan doxie dropbox + fantastical firefox google-chrome google-drive
bash
d_bash_1256
--- +++ @@ -14,7 +14,9 @@ ln -sf $DOTFILES/.gitignore ~/.gitignore # Tools +sudo apt-get install autojump -y sudo apt-get install mosh -y +ln -sf $DOTFILES/.tmux.conf ~/.tmux.conf # Vim curl -fLo ~/.vim/autoload/plug.vim --create-dirs \
bash
d_bash_1257
--- +++ @@ -9,6 +9,14 @@ sudo apt-get update echo "----------------------------------------" +echo +echo "========================================" +echo "Host remove packages" +echo "----------------------------------------" +sudo apt-get remove -y \ + python-pytest \ + +echo "-----------------------------------...
bash
d_bash_1258
--- +++ @@ -7,7 +7,7 @@ export IS_CI=1 # Select our Xcode version -sudo xcode-select -s /Applications/Xcode_13.3.app +sudo xcode-select -s /Applications/Xcode_14.1.app # Remove the pre-installed Cocoapods binary rm /usr/local/bin/pod
bash
d_bash_1259
--- +++ @@ -29,7 +29,7 @@ mkdir build cd build if [ "$platform" == 'linux' -a "$machine" != 'armv7l' ]; then - cmake $CMAKE_COMMON_VARIABLES .. + cmake $CMAKE_COMMON_VARIABLES -DLLVM_USE_OPROFILE=ON .. else cmake $CMAKE_COMMON_VARIABLES .. fi
bash
d_bash_1260
--- +++ @@ -11,5 +11,5 @@ # Draft documents for tag in dotnet fog pkgcloud shade; do tools/build-rst.sh firstapp \ - --tag ${tag} --target "draft/firstapp-${tag}" + --tag ${tag} --target "api-ref/draft/firstapp-${tag}" done
bash
d_bash_1261
--- +++ @@ -24,12 +24,12 @@ cd .. cp --parents -v -t gh-page \ ./node_modules/jointjs/dist/joint.all.css \ - ./webui/logic.css \ ./node_modules/jquery/dist/jquery.min.js \ ./node_modules/lodash/index.js \ ./node_modules/backbone/backbone-min.js \ ./node_modules/jointjs/dist/joint.all.js \ - ./webui/logic....
bash
d_bash_1262
--- +++ @@ -1 +1 @@ -export MAVEN_OPTS="-Xmx800m -Xss2048k" +export MAVEN_OPTS="-Xmx800m -Xss2048k -DgenerateBackupPoms=false"
bash
d_bash_1263
--- +++ @@ -1,3 +1,9 @@ +if [ ! -d "$HOME/.sdkman" ]; then + curl -s "https://get.sdkman.io" | bash +fi + +source "$HOME/.sdkman/bin/sdkman-init.sh" + # Set JAVA_HOME JRE=$(readlink -f $(which java)) JDK=$(readlink -f $(which javac))
bash
d_bash_1264
--- +++ @@ -29,6 +29,8 @@ log_options: - syslog-address=udp://${syslog_host}:${syslog_port} - tag="{{.Name}}" + haproxy: + syslog: ${syslog_host}:${syslog_port} EOF cat > tmp/release_version.yml <<EOF
bash
d_bash_1265
--- +++ @@ -82,11 +82,11 @@ cd examples/03_mapper_evaluation_SE cd bams - snakemake -p + snakemake -p --allow-ambiguity cd .. rm -fR ~/.smbl - snakemake -p + snakemake -p --allow-ambiguity )
bash
d_bash_1266
--- +++ @@ -1,4 +1,7 @@ #!/bin/bash + +set -u +set -o errexit working_dir=`dirname $0`
bash
d_bash_1267
--- +++ @@ -1,17 +1,20 @@ #!/bin/#!/usr/bin/env bash - +echo "Installing packages" # Install modules sh ./install_packages.sh +echo "Generating synthetic users" # Generate 2 fake web site users python3 user_generator.py --n=2 +echo "Generating synthetic events" rm *.out # Generate 10 events python3 event_...
bash
d_bash_1268
--- +++ @@ -4,7 +4,7 @@ set -a FPF_CI=true -read -e -p "Enter a build designator: " -i "${USER}" BUILD_NUM +read -e -p "Enter a build designator: " -i "${USER}" CIRCLE_BUILD_NUM read -e -p "Enter AWS region: " -i "us-west-1" CI_AWS_REGION read -e -p "Enter AWS EC2 type: " -i "t2.small" CI_AWS_TYPE read -e -p "...
bash
d_bash_1269
--- +++ @@ -11,23 +11,18 @@ case $i in --gpgsql-host=*) HOST="${i#*=}" - shift # past argument=value ;; --gpgsql-port=*) PORT="${i#*=}" - shift # past argument=value ;; --gpgsql-dbname=*) DB="${i#*=}" - shift # past argument=value ;; --gpgsql-user=*) US...
bash
d_bash_1270
--- +++ @@ -1,6 +1,7 @@ #!/bin/sh -DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" +DIR=`dirname $0` +echo "BASEDIR $DIR" oc login -u test -p test --insecure-skip-tls-verify=true https://localhost:8443 oc delete project enmasse-ci
bash
d_bash_1271
--- +++ @@ -6,5 +6,11 @@ # Create base installation ./install.sh install +# Install macOS preferences +if [ "$(uname)" == "Darwin" ]; then + echo "macOS (Darwin) detected; sourcing macOS preferences" + ./macOS/install.sh +fi + # Install vim plugins and configurations ./vim/install.sh
bash
d_bash_1272
--- +++ @@ -4,7 +4,7 @@ cp hub_bash_completion.sh ~/.hub_bash_completion.sh cp gitignore ~/.gitignore cp gitconfig ~/.gitconfig -cp hub_bash_completion.sh ~/.hub_bash_completion.sh +cp hg_bash_completion ~ cp hgrc ~/.hgrc cp inputrc ~/.inputrc cp pythonrc ~/.pythonrc
bash
d_bash_1273
--- +++ @@ -9,7 +9,7 @@ # find all fastq files that are older than certain date # filter out the X FCs only -FASTQS=$(find ${DEMUX_DIR}/{*ALXX,*CCXX,*CCXY} -name *.fastq.gz ! -newermt ${CUTOFF_DATE}) +FASTQS=$(find ${DEMUX_DIR}/{*ALXX,*CCXX,*CCXY,*CCX2} -name *.fastq.gz ! -newermt ${CUTOFF_DATE}) # get the run...
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d_bash_1274
--- +++ @@ -4,7 +4,7 @@ source "${DOTFILES_ROOT}/lib/colors.sh" source "${DOTFILES_ROOT}/lib/git.sh" -ps1_prompt() { +git_info_for_ps1() { local prompt="" if is_a_git_repo; then @@ -34,7 +34,7 @@ PS1="\[\033]0;\$(basename "\\w")\007\]" # show basename of the current directory as window title PS1+="\w"...
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d_bash_1275
--- +++ @@ -1,7 +1,7 @@ GIT=https://gitlab.redox-os.org/redox-os/cargo.git GIT_UPSTREAM=https://github.com/rust-lang/cargo.git BRANCH=redox -BUILD_DEPENDS=(openssl zlib) +BUILD_DEPENDS=(curl openssl zlib) function recipe_build { sysroot="$(realpath ../sysroot)"
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d_bash_1276
--- +++ @@ -7,8 +7,14 @@ python --version pip --version pip install flake8 + +EXCLUDES='' +if [[ $PYTHON == 'py27' ]]; then + EXCLUDES='--exclude pyfakefs/fake_pathlib.py,tests/fake_pathlib_test.py' +fi + # stop the build if there are Python syntax errors or undefined names -flake8 . --count --select=E901,E999...
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d_bash_1277
--- +++ @@ -10,7 +10,7 @@ # Extract papers tmpdir=$(mktemp -d) -openssl aes-256-cbc -d -in $paperbin -pass pass:$password -out $tmpdir/decrypt +openssl aes-256-cbc -d -in $paperbin -pass pass:$password -md sha256 -out $tmpdir/decrypt if [ $? -ne 0 ]; then echo "Unable to decrypt $paperbin" rm -rv $tmpdir
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d_bash_1278
--- +++ @@ -6,5 +6,9 @@ rm -r bin/ cp settings.json.default settings.json + +awk '!/AssemblyInformationalVersion/' Properties/AssemblyInfo.cs > assembly.temp && mv assembly.temp Properties/AssemblyInfo.cs +echo "[assembly: AssemblyInformationalVersion(\"$(git rev-parse --verify HEAD)\")]" >> Properties/AssemblyIn...
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d_bash_1279
--- +++ @@ -4,7 +4,7 @@ # This list is from https://charlie.bz/blog/things-that-clear-rubys-method-cache IGNORE_FILE=/tmp/cache_busters_ignore -cat script/ignores | ruby -ne 'puts $_.split(/\s+###/)[0]' > $IGNORE_FILE +cat script/ignores | grep -v "^$" | ruby -ne 'puts $_.split(/\s+###/)[0]' > $IGNORE_FILE egr...
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d_bash_1280
--- +++ @@ -1,7 +1,7 @@ #!/bin/sh ### USAGE -# curl https://raw.githubusercontent.com/jenkins-infra/azure/master/scripts/init-ubuntu1404.sh && sudo ./init-ubuntu1404.sh +# curl -O https://raw.githubusercontent.com/jenkins-infra/azure/master/scripts/init-ubuntu1404.sh && sudo bash ./init-ubuntu1404.sh && newgrp do...
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d_bash_1281
--- +++ @@ -34,4 +34,4 @@ done dotfiles_echo "Dotfiles installation complete!" -dotfiles_echo "Complete Brew Bundle installation with 'brew bundle install --global'" +dotfiles_echo "Complete Brew Bundle installation with 'brew bundle install -v --global'"
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d_bash_1282
--- +++ @@ -10,13 +10,13 @@ git submodule update --init # The version of the toolkit defined by the pinned submodule -PINNED_SUBMODULE_VERSION=`cat app/assets/VERSION.txt` +PINNED_SUBMODULE_VERSION=`cat govuk_frontend_toolkit/VERSION.txt` # Force the submodule to pull the latest and checkout origin/master git...
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d_bash_1283
--- +++ @@ -2,7 +2,7 @@ yum -y install gsl-devel -PYTHON_VERSIONS=("cp35-cp35m" "cp36-cp36m" "cp37-cp37m" "cp38-cp38" "cp39-cp39") +PYTHON_VERSIONS=("cp35-cp35m" "cp36-cp36m" "cp37-cp37m" "cp38-cp38" "cp39-cp39" "cp310-cp310") for PYTHON_VERSION in ${PYTHON_VERSIONS[@]}; do /opt/python/${PYTHON_VERSION}/...
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d_bash_1284
--- +++ @@ -1,9 +1,11 @@ -# Install a package +# Install one or more packages # # Usage: -# option Package emacs-nox11 +# option Package apache mysql php + # Make sure package database gets initialized. option PackageInit -strategy_add $PHASE_FREEBSD_OPTION_INSTALL pkg -c ${BOARD_FREEBSD_MOUNTPOINT} -y $1 - +...
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d_bash_1285
--- +++ @@ -26,7 +26,7 @@ GIT_COMMIT_SHORT=${GIT_COMMIT:0:7} fi -if [ "x$RELEASE" = "xtrue" ]; then +if [ "x$BUILD_RELEASE" = "xtrue" ]; then BUILD_ID=$BUILD_NUMBER else BUILD_ID=$BUILD_NUMBER.$(date +%y%m%d)git${GIT_COMMIT_SHORT}
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d_bash_1286
--- +++ @@ -13,7 +13,7 @@ } start musashi /media/musashi 8080 start staging $HOME/staging 8081 -start staging $HOME/media 8082 +start media $HOME/media 8082 start timothy /media/timothy/movies 8083 start usb1 /run/media/zero/USB20FD 8084 start usb2 /run/media/zero/f538fa97-80d3-4ef3-9010-99460637a69a 8085
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d_bash_1287
--- +++ @@ -12,7 +12,7 @@ export PYTHONPATH="src" pytest \ --cov=src \ - -n 2 \ + -n 4 \ -s \ --junitxml=build/pytest-$envname.xml \ src/tests src/integration_tests
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d_bash_1288
--- +++ @@ -1,6 +1,6 @@ +# !/bin/bash + # After getting ASDF installed, run this script... - -set -e ########################################################################### # Custom @@ -14,9 +14,9 @@ # Generalized asdf_setup() { - asdf plugin-add $1 - asdf install $1 $2 - asdf global $1 $2 + asdf plu...
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d_bash_1289
--- +++ @@ -1,6 +1,6 @@ # Use `hub` as our git wrapper: # http://defunkt.github.com/hub/ -hub_path=$(readlink -f `which hub`) +hub_path=$(which hub) if (( $+commands[hub] )) then alias git=$hub_path
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d_bash_1290
--- +++ @@ -1,2 +1,2 @@ ./build-common.sh -electron-packager build Squiffy --platform=linux --arch=x64 --version=0.29.2 --app-bundle-id=uk.co.textadventures.squiffy --helper-bundle-id=uk.co.textadventures.squiffy.helper --app-version=4.0.0 +electron-packager build Squiffy --platform=linux --arch=x64 --version=0.28.3...
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d_bash_1291
--- +++ @@ -8,9 +8,9 @@ curl -sL "https://keyserver.ubuntu.com/pks/lookup?op=get&search=0x2EE0EA64E40A89B84B2DF73499E82A75642AC823" | sudo -H gpg --no-default-keyring --keyring gnupg-ring:/etc/apt/trusted.gpg.d/scalasbt-release.gpg --import sudo chmod 644 /etc/apt/trusted.gpg.d/scalasbt-release.gpg sudo apt-get up...
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d_bash_1292
--- +++ @@ -1,26 +1,26 @@ #!/bin/sh - -TESTS="1 2 3" if [ $# -lt 1 ] ; then echo 'Specify binary to run as the first argument' exit 1 fi -for _t in $TESTS ; do - $1 ${TEST_DIR}/$_t.in ${TEST_DIR}/$_t.out + +for _tin in ${TEST_DIR}/*.in ; do + _t=`echo $_tin | sed -e 's/.in$//'` + $1 $_t.in $_t.out if [ $...
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d_bash_1293
--- +++ @@ -1,12 +1,11 @@ #!/usr/bin/env bash if [ -z "$1" ]; then - echo "Usage: $0 <vk_id>" + echo "Usage: $0 <vk_id>" 1>&2 exit 1 fi -function notify -{ +notify() { TEXT="offline" if [ "$2" -ne 0 ] then
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d_bash_1294
--- +++ @@ -7,7 +7,8 @@ secrets_uri="s3://${state_bucket}/google-oauth-secrets.yml" export oauth_client_id export oauth_client_secret - if aws s3 ls "${secrets_uri}" > /dev/null ; then + secrets_size=$(aws s3 ls "${secrets_uri}" | awk '{print $3}') + if [ "${secrets_size}" != 0 ] && [ -n "${secrets_size}"...
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d_bash_1295
--- +++ @@ -26,5 +26,5 @@ echo " samtools view -bh -@ $THREADS -f 2 -o ${c}.bam VCAP_dedup.realigned.bam $c \ && samtools index -@ $THREADS ${c}.bam ${c}.bai - " | qsub -N samtools-${THREADS}-chr${c} -cwd -V -l h_rt=02:00:00 -l h_vmem=100M #-pe threaded $THREADS + " | qsub -N samtools-${THREADS}-...
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d_bash_1296
--- +++ @@ -24,7 +24,7 @@ mkdir -p ${TEMPLATE_DIR} pushd ../game_engine - GOPATH=$(pwd) go run templater.go -filepath=${TEMPLATE_DIR} + GOPATH=$(pwd) go run engine.go -write_templates=true -template_out_dir=${TEMPLATE_DIR} popd }
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d_bash_1297
--- +++ @@ -7,3 +7,6 @@ # Create an "incoming" folder, where new analyses will land mkdir -p "$1/incoming/" + +# Populate sqlite3 db file +sqlite3 "$1/samples.sqlite" 'CREATE TABLE `samples` (`mwid` TEXT PRIMARY KEY NOT NULL,`mwpath` TEXT NOT NULL);'
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d_bash_1298
--- +++ @@ -2,17 +2,19 @@ uncrustify="uncrustify -c .uncrustify.cfg --replace --no-backup" -# We indent each thing twice because ident is not idempotent - in some cases -# it will flip-flop between two indentation styles. +# We indent each thing twice because uncrustify is not idempotent - in some +# cases it wi...
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d_bash_1299
--- +++ @@ -1,5 +1,5 @@ #!/bin/sh mkdir -p "$HOME/.vim/bundle/gocode/autoload" -mkdir -p "$HOME/.vim/bundle/gocode/ftplugin" +mkdir -p "$HOME/.vim/bundle/gocode/ftplugin/go" cp "${0%/*}/autoload/gocomplete.vim" "$HOME/.vim/bundle/gocode/autoload" -cp "${0%/*}/ftplugin/go/gocomplete.vim" "$HOME/.vim/bundle/gocode/f...
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