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graph/README.md

@@ -4,13 +4,13 @@ This directory ships the pre-built ctx LLM-wiki and knowledge graph.
 
 Current snapshot:
 
-- **102,925 graph nodes**
-- **2,913,930 graph edges**
+- **102,928 graph nodes**
+- **2,913,960 graph edges**
 - **52 Louvain communities**
-- **91,463 skill entity pages** with hydrated installable bodies
-- **467 agent pages**
-- **10,788 MCP server pages**
-- **207 harness pages**
+- **91,464 skill entity pages**; **89,465** have hydrated catalog bodies
+- **467 agent pages**
+- **10,790 MCP server pages**
+- **207 harness pages**
 - **89,465 hydrated `SKILL.md` bodies**
 - **28,612 long skill bodies converted through the micro-skill gate**
 
@@ -23,11 +23,12 @@ The runtime recommendation paths use this graph in two ways:
 
 | File | Contents |
 |---|---|
-| `wiki-graph-runtime.tar.gz` | Fast install artifact used by default `ctx-init --graph`: `graphify-out/*`, the skill index, 207 harness pages, wiki index files, and Obsidian metadata needed for recommendations and harness dry-runs without expanding every entity page |
+| `wiki-graph-runtime.tar.gz` | Fast install artifact used by default `ctx-init --graph`: `graphify-out/*`, the skill index, 207 harness pages, wiki index files, and Obsidian metadata needed for recommendations and harness dry-runs without expanding every entity page |
 | `wiki-graph.tar.gz` | Full LLM-wiki: entity pages, converted skill bodies, mirrored agent bodies, concept pages, `graphify-out/graph.json`, `graph-delta.json`, export manifest, communities, skill indexes, and Obsidian metadata |
 | Skill catalog gzip | Compressed skill index for the 89,465 body-backed skill entries shipped in the wiki |
 | `communities.json` | Current Louvain community export |
-| `graphify-out/dashboard-neighborhoods.sqlite3` inside both tarballs | Compact top-neighbor index used by `ctx-monitor` so `/api/graph/<slug>.json` does not cold-parse the 604 MB NetworkX graph |
+| `entity-overlays.jsonl` | Release overlay for first-class entities added after the base graph export; installed beside `graphify-out/graph.json` by `ctx-init --graph` |
+| `graphify-out/dashboard-neighborhoods.sqlite3` inside both tarballs | Compact top-neighbor index used by `ctx-monitor` so `/api/graph/<slug>.json` does not cold-parse the 818 MiB graph JSON |
 | `viz-overview.html` | Plotly overview of the graph |
 | `viz-python.html` | Python-focused graph view |
 | `viz-security.html` | Security-focused graph view |
@@ -110,14 +111,14 @@ For release-count validation, pin the exact snapshot numbers:
 
 ```bash
 python src/validate_graph_artifacts.py --deep \
-  --expected-nodes 102925 \
-  --expected-edges 2913930 \
-  --expected-semantic-edges 1683163 \
-  --expected-harness-nodes 207 \
-  --expected-skill-pages 91463 \
-  --expected-agent-pages 467 \
-  --expected-mcp-pages 10788 \
-  --expected-harness-pages 207
+  --expected-nodes 102928 \
+  --expected-edges 2913960 \
+  --expected-semantic-edges 1683193 \
+  --expected-harness-nodes 207 \
+  --expected-skill-pages 91464 \
+  --expected-agent-pages 467 \
+  --expected-mcp-pages 10790 \
+  --expected-harness-pages 207
 ```
 
 Manual sanity checks:
@@ -205,14 +206,16 @@ unpark and stage the artifacts exactly once:
 
 ```bash
 python scripts/graph_artifact_guard.py unpark
-git add graph/wiki-graph.tar.gz graph/wiki-graph-runtime.tar.gz graph/*.json.gz
+git add graph/wiki-graph.tar.gz graph/wiki-graph-runtime.tar.gz \
+  graph/skills-sh-catalog.json.gz graph/communities.json graph/entity-overlays.jsonl
 python scripts/graph_artifact_guard.py prune
 ```
 
 If a local Git integration gets interrupted while artifacts are dirty,
-`python scripts/graph_artifact_guard.py prune` removes unreachable local Git
-objects and prunable local LFS cache entries. It does not delete tracked graph
-files, rewrite history, or change the remote LFS store.
+`python scripts/graph_artifact_guard.py prune` removes prunable local LFS cache
+entries. It does not delete tracked graph files, rewrite history, or change the
+remote LFS store. Repo-wide `git prune --expire=now` is intentionally opt-in via
+`--include-git-prune` because it can discard unrelated dangling recovery objects.
 
 For a bulk skill refresh, update the existing shipped tarball through the
 release refresh path:

graph/communities.json

@@ -8085,7 +8085,9 @@
         "skill:wordpress-centric-high-seo-optimized-blogwriting-skill",
         "skill:x-article-publisher-skill",
         "skill:zendesk-automation",
-        "skill:zoho-crm-automation"
+        "skill:zoho-crm-automation",
+        "skill:nango-integration-catalog",
+        "mcp-server:nango-docs"
       ]
     },
     "3": {
@@ -103179,11 +103181,12 @@
         "skill:skills-sh-ythx-101-antigravity-bridge-antigravity-bridge",
         "skill:skills-sh-zreadai-zread-skill-zread",
         "skill:skills-sh-zw008-vmware-aiops-vmware-aiops",
-        "skill:skills-sh-zw008-vmware-monitor-vmware-monitor"
+        "skill:skills-sh-zw008-vmware-monitor-vmware-monitor",
+        "mcp-server:nango-mcp"
       ]
     }
   },
   "total_communities": 52,
-  "generated": "20260526T150500Z",
-  "export_id": "ctx-graph-overlay-20260526T150500Z-102925-2913930"
+  "generated": "20260527T171206Z",
+  "export_id": "ctx-graph-rescore-20260527T171206Z-102928-2913960"
 }