Upload orbnetdenali_stats.json with huggingface_hub
Browse files- orbnetdenali_stats.json +255 -0
orbnetdenali_stats.json
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| 1 |
+
{
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| 2 |
+
"level_of_theory": "DFT wB97X-D3/def2-TZVP (Entos Qcore 0.8.17) + semi-empirical GFN1-xTB; NO forces in this release",
|
| 3 |
+
"units": {
|
| 4 |
+
"pos": "angstrom",
|
| 5 |
+
"energies": "eV on access (raw Hartree stored)"
|
| 6 |
+
},
|
| 7 |
+
"entity": "parent molecule (mol_id); 15 mol_ids split into sub-entities where their conformers disagree on element ordering",
|
| 8 |
+
"n_entities": 212920,
|
| 9 |
+
"n_source_mol_ids": 212905,
|
| 10 |
+
"n_conformers": 2338891,
|
| 11 |
+
"atoms_per_molecule": {
|
| 12 |
+
"min": 1,
|
| 13 |
+
"max": 74,
|
| 14 |
+
"mean": 39.51
|
| 15 |
+
},
|
| 16 |
+
"conformers_per_molecule": {
|
| 17 |
+
"min": 1,
|
| 18 |
+
"max": 35,
|
| 19 |
+
"mean": 10.98,
|
| 20 |
+
"n_single_conformer_entities": 44633
|
| 21 |
+
},
|
| 22 |
+
"total_atoms_stored": 8412013,
|
| 23 |
+
"total_conformer_atoms": 104965964,
|
| 24 |
+
"elements": {
|
| 25 |
+
"count": 17,
|
| 26 |
+
"atomic_numbers": [
|
| 27 |
+
1,
|
| 28 |
+
3,
|
| 29 |
+
5,
|
| 30 |
+
6,
|
| 31 |
+
7,
|
| 32 |
+
8,
|
| 33 |
+
9,
|
| 34 |
+
11,
|
| 35 |
+
12,
|
| 36 |
+
14,
|
| 37 |
+
15,
|
| 38 |
+
16,
|
| 39 |
+
17,
|
| 40 |
+
19,
|
| 41 |
+
20,
|
| 42 |
+
35,
|
| 43 |
+
53
|
| 44 |
+
],
|
| 45 |
+
"symbols": [
|
| 46 |
+
"H",
|
| 47 |
+
"Li",
|
| 48 |
+
"B",
|
| 49 |
+
"C",
|
| 50 |
+
"N",
|
| 51 |
+
"O",
|
| 52 |
+
"F",
|
| 53 |
+
"Na",
|
| 54 |
+
"Mg",
|
| 55 |
+
"Si",
|
| 56 |
+
"P",
|
| 57 |
+
"S",
|
| 58 |
+
"Cl",
|
| 59 |
+
"K",
|
| 60 |
+
"Ca",
|
| 61 |
+
"Br",
|
| 62 |
+
"I"
|
| 63 |
+
],
|
| 64 |
+
"atom_counts_per_entity_vector": {
|
| 65 |
+
"H": 3624716,
|
| 66 |
+
"Li": 1968,
|
| 67 |
+
"B": 8685,
|
| 68 |
+
"C": 3126319,
|
| 69 |
+
"N": 512940,
|
| 70 |
+
"O": 759200,
|
| 71 |
+
"F": 89487,
|
| 72 |
+
"Na": 1728,
|
| 73 |
+
"Mg": 512,
|
| 74 |
+
"Si": 24326,
|
| 75 |
+
"P": 55930,
|
| 76 |
+
"S": 101773,
|
| 77 |
+
"Cl": 52899,
|
| 78 |
+
"K": 1357,
|
| 79 |
+
"Ca": 488,
|
| 80 |
+
"Br": 27943,
|
| 81 |
+
"I": 21742
|
| 82 |
+
}
|
| 83 |
+
},
|
| 84 |
+
"charge": {
|
| 85 |
+
"min": -8,
|
| 86 |
+
"max": 6,
|
| 87 |
+
"n_charged_conformers": 191946,
|
| 88 |
+
"n_charged_entities": 41477,
|
| 89 |
+
"distribution": {
|
| 90 |
+
"-8": 2,
|
| 91 |
+
"-7": 6,
|
| 92 |
+
"-6": 79,
|
| 93 |
+
"-5": 238,
|
| 94 |
+
"-4": 1287,
|
| 95 |
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"-3": 5424,
|
| 96 |
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"-2": 21541,
|
| 97 |
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"-1": 67683,
|
| 98 |
+
"0": 2146945,
|
| 99 |
+
"1": 60535,
|
| 100 |
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"2": 24916,
|
| 101 |
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"3": 8065,
|
| 102 |
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"4": 1771,
|
| 103 |
+
"5": 361,
|
| 104 |
+
"6": 38
|
| 105 |
+
}
|
| 106 |
+
},
|
| 107 |
+
"subsets": {
|
| 108 |
+
"vocab": [
|
| 109 |
+
"conformers",
|
| 110 |
+
"jsch",
|
| 111 |
+
"protomers",
|
| 112 |
+
"qm7bprotomers",
|
| 113 |
+
"saltcomplex",
|
| 114 |
+
"small",
|
| 115 |
+
"ssi"
|
| 116 |
+
],
|
| 117 |
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"conformers": {
|
| 118 |
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"conformers": 1771030,
|
| 119 |
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"jsch": 142,
|
| 120 |
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"protomers": 185244,
|
| 121 |
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"qm7bprotomers": 30622,
|
| 122 |
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"saltcomplex": 249496,
|
| 123 |
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"small": 94569,
|
| 124 |
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"ssi": 7788
|
| 125 |
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},
|
| 126 |
+
"entities": {
|
| 127 |
+
"conformers": 116935,
|
| 128 |
+
"jsch": 142,
|
| 129 |
+
"protomers": 16773,
|
| 130 |
+
"qm7bprotomers": 9428,
|
| 131 |
+
"saltcomplex": 21305,
|
| 132 |
+
"small": 40549,
|
| 133 |
+
"ssi": 7788
|
| 134 |
+
}
|
| 135 |
+
},
|
| 136 |
+
"splits": {
|
| 137 |
+
"test_set": {
|
| 138 |
+
"conformers": 15120,
|
| 139 |
+
"entities": 998
|
| 140 |
+
},
|
| 141 |
+
"test_set_plus": {
|
| 142 |
+
"conformers": 55023,
|
| 143 |
+
"entities": 8743
|
| 144 |
+
},
|
| 145 |
+
"prelim_1": {
|
| 146 |
+
"conformers": 235224,
|
| 147 |
+
"entities": 21120
|
| 148 |
+
},
|
| 149 |
+
"training_set_plus": {
|
| 150 |
+
"conformers": 2268748,
|
| 151 |
+
"entities": 203179
|
| 152 |
+
}
|
| 153 |
+
},
|
| 154 |
+
"energy_dft_raw_hartree": {
|
| 155 |
+
"min": -21127.445811038782,
|
| 156 |
+
"max": 0.0,
|
| 157 |
+
"n_nonfinite": 0
|
| 158 |
+
},
|
| 159 |
+
"energy_gfn1_xtb_raw_hartree": {
|
| 160 |
+
"min": -173.9577021317025,
|
| 161 |
+
"max": 0.2350495,
|
| 162 |
+
"n_nonfinite": 7185
|
| 163 |
+
},
|
| 164 |
+
"reference_vectors_hartree": {
|
| 165 |
+
"dft": {
|
| 166 |
+
"per_element": {
|
| 167 |
+
"H": -0.6026479353834693,
|
| 168 |
+
"Li": -7.596389778104694,
|
| 169 |
+
"B": -24.94374564126091,
|
| 170 |
+
"C": -38.10834821940651,
|
| 171 |
+
"N": -54.7448411224096,
|
| 172 |
+
"O": -75.22366613572332,
|
| 173 |
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"F": -99.86024286746968,
|
| 174 |
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"Na": -162.34749978494253,
|
| 175 |
+
"Mg": -200.15770264186403,
|
| 176 |
+
"Si": -289.48821347128074,
|
| 177 |
+
"P": -341.43536290745976,
|
| 178 |
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"S": -398.1887024076832,
|
| 179 |
+
"Cl": -460.2023385078045,
|
| 180 |
+
"K": -600.0456342201392,
|
| 181 |
+
"Ca": -677.2447175492706,
|
| 182 |
+
"Br": -2574.1881814248,
|
| 183 |
+
"I": -297.72532661434417
|
| 184 |
+
},
|
| 185 |
+
"per_charge": 0.1879831105193654
|
| 186 |
+
},
|
| 187 |
+
"xtb1": {
|
| 188 |
+
"per_element": {
|
| 189 |
+
"H": -0.5208329572193469,
|
| 190 |
+
"Li": -1.7461316517027954,
|
| 191 |
+
"B": -1.5424501004892137,
|
| 192 |
+
"C": -1.9929689619492361,
|
| 193 |
+
"N": -3.075480397103448,
|
| 194 |
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"O": -4.6038807225407075,
|
| 195 |
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"F": -5.1617902995225675,
|
| 196 |
+
"Na": -2.093343480346614,
|
| 197 |
+
"Mg": -2.9610922955833923,
|
| 198 |
+
"Si": -2.1037321265006854,
|
| 199 |
+
"P": -2.958554182863907,
|
| 200 |
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"S": -3.6296984208737113,
|
| 201 |
+
"Cl": -4.347008992761528,
|
| 202 |
+
"K": 0.11038325938693395,
|
| 203 |
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"Ca": -2.585809497684917,
|
| 204 |
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"Br": -4.077201157275856,
|
| 205 |
+
"I": -4.302467838450667
|
| 206 |
+
},
|
| 207 |
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"per_charge": 0.0031307393171228323
|
| 208 |
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},
|
| 209 |
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"delta": {
|
| 210 |
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"per_element": {
|
| 211 |
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"H": -0.08186425735912417,
|
| 212 |
+
"Li": -5.850749233319732,
|
| 213 |
+
"B": -23.40128045736529,
|
| 214 |
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"C": -36.11531229104133,
|
| 215 |
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"N": -51.66940632377754,
|
| 216 |
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"O": -70.61988109493491,
|
| 217 |
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"F": -94.69855241016305,
|
| 218 |
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"Na": -160.25446875167933,
|
| 219 |
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"Mg": -197.1966867548762,
|
| 220 |
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"Si": -287.38429902700466,
|
| 221 |
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"P": -338.47663208579604,
|
| 222 |
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"S": -394.55916256733974,
|
| 223 |
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"Cl": -455.85551492330785,
|
| 224 |
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"K": -600.1557885996543,
|
| 225 |
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"Ca": -674.656620279178,
|
| 226 |
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"Br": -2570.1112766606584,
|
| 227 |
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"I": -293.42298880012567
|
| 228 |
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},
|
| 229 |
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"per_charge": 0.18549340465622702
|
| 230 |
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}
|
| 231 |
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},
|
| 232 |
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"hartree_to_eV": 27.211386245988,
|
| 233 |
+
"bounding_box_extent_angstrom_exact": {
|
| 234 |
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"side_min": 0.0,
|
| 235 |
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"side_max": 281.5433349609375,
|
| 236 |
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"diagonal_min": 0.0,
|
| 237 |
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"diagonal_max": 316.7602233886719,
|
| 238 |
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"largest_diagonal_entity_id": "saltcomplex_3753_CHEMBL3084413_Chloride",
|
| 239 |
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"largest_diagonal_subset": "saltcomplex",
|
| 240 |
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"exhaustive": true,
|
| 241 |
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"n_conformers": 2338891
|
| 242 |
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},
|
| 243 |
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"bounding_box_extent_angstrom_sampled": {
|
| 244 |
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"side_min": 0.19543133676052094,
|
| 245 |
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"side_max": 94.33129072189331,
|
| 246 |
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"diagonal_min": 2.223905484184143,
|
| 247 |
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"diagonal_max": 95.07935676085008
|
| 248 |
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},
|
| 249 |
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"energy_dft_referenced_eV_sampled": {
|
| 250 |
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"min": -13.332751436731693,
|
| 251 |
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"max": 58.51679954018386,
|
| 252 |
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"mean": 0.08300002825771574
|
| 253 |
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},
|
| 254 |
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"sample_size_for_distributions": 8000
|
| 255 |
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}
|