Add batch 21
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- 1cyn/1cyn_ligand.mol2 +408 -0
- 1cyn/1cyn_ligand.sdf +398 -0
- 1cyn/1cyn_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1cyn/1cyn_protein_processed_fix.pdb +0 -0
- 1o34/1o34_ligand.mol2 +80 -0
- 1o34/1o34_ligand.sdf +66 -0
- 1o34/1o34_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1o34/1o34_protein_processed_fix.pdb +0 -0
- 1q54/1q54_ligand.mol2 +67 -0
- 1q54/1q54_ligand.sdf +63 -0
- 1q54/1q54_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1q54/1q54_protein_processed_fix.pdb +0 -0
- 1q6j/1q6j_ligand.mol2 +150 -0
- 1q6j/1q6j_ligand.sdf +148 -0
- 1q6j/1q6j_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1q6j/1q6j_protein_processed_fix.pdb +0 -0
- 1vwl/1vwl_ligand.mol2 +284 -0
- 1vwl/1vwl_ligand.sdf +272 -0
- 1vwl/1vwl_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1vwl/1vwl_protein_processed_fix.pdb +0 -0
- 2c9d/2c9d_ligand.mol2 +131 -0
- 2c9d/2c9d_ligand.sdf +125 -0
- 2c9d/2c9d_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2c9d/2c9d_protein_processed_fix.pdb +0 -0
- 2e5y/2e5y_ligand.mol2 +104 -0
- 2e5y/2e5y_ligand.sdf +102 -0
- 2e5y/2e5y_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2e5y/2e5y_protein_processed_fix.pdb +0 -0
- 2f6t/2f6t_ligand.mol2 +113 -0
- 2f6t/2f6t_ligand.sdf +105 -0
- 2f6t/2f6t_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2f6t/2f6t_protein_processed_fix.pdb +0 -0
- 2kff/2kff_ligand.mol2 +403 -0
- 2kff/2kff_ligand.sdf +397 -0
- 2kff/2kff_protein_esmfold_aligned_tr_fix.pdb +825 -0
- 2kff/2kff_protein_processed_fix.pdb +0 -0
- 2oxd/2oxd_ligand.mol2 +49 -0
- 2oxd/2oxd_ligand.sdf +39 -0
- 2oxd/2oxd_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2oxd/2oxd_protein_processed_fix.pdb +0 -0
- 2vmc/2vmc_ligand.mol2 +76 -0
- 2vmc/2vmc_ligand.sdf +66 -0
- 2vmc/2vmc_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2vmc/2vmc_protein_processed_fix.pdb +0 -0
- 2ybt/2ybt_ligand.mol2 +117 -0
- 2ybt/2ybt_ligand.sdf +107 -0
- 2ybt/2ybt_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2ybt/2ybt_protein_processed_fix.pdb +0 -0
- 3bm8/3bm8_ligand.mol2 +60 -0
- 3bm8/3bm8_ligand.sdf +50 -0
1cyn/1cyn_ligand.mol2
ADDED
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| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:45 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1cyn_ligand
|
| 7 |
+
196 196 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N 17.7810 21.9410 36.8890 N.am 1 BMT -0.2503
|
| 14 |
+
2 CN 17.9180 23.2950 37.5310 C.3 1 BMT 0.0255
|
| 15 |
+
3 CA 18.3340 21.6680 35.5530 C.3 1 BMT 0.1594
|
| 16 |
+
4 C 19.8550 21.8280 35.4030 C.2 1 BMT 0.2067
|
| 17 |
+
5 O 20.6020 22.2520 36.3140 O.2 1 BMT -0.3943
|
| 18 |
+
6 CB 17.6100 22.5300 34.4770 C.3 1 BMT 0.0994
|
| 19 |
+
7 OG1 18.0560 23.8860 34.6240 O.3 1 BMT -0.3867
|
| 20 |
+
8 CG2 16.0570 22.4840 34.6490 C.3 1 BMT -0.0069
|
| 21 |
+
9 CD1 15.5880 21.0390 34.5130 C.3 1 BMT -0.0583
|
| 22 |
+
10 CD2 15.3500 23.3780 33.6200 C.3 1 BMT -0.0313
|
| 23 |
+
11 CE 15.5480 22.9180 32.1720 C.2 1 BMT -0.0986
|
| 24 |
+
12 CZ 15.7520 23.7650 31.1730 C.2 1 BMT -0.1017
|
| 25 |
+
13 CH 15.9540 23.2840 29.7400 C.3 1 BMT -0.0486
|
| 26 |
+
14 N 20.3650 21.3770 34.2510 N.am 1 ABA -0.2636
|
| 27 |
+
15 CA 21.8040 21.3180 34.0550 C.3 1 ABA 0.1309
|
| 28 |
+
16 C 22.1910 22.1510 32.8410 C.2 1 ABA 0.2059
|
| 29 |
+
17 O 22.2260 21.6350 31.7190 O.2 1 ABA -0.3942
|
| 30 |
+
18 CB 22.2330 19.8590 33.8470 C.3 1 ABA -0.0152
|
| 31 |
+
19 CG 21.8650 18.9070 35.0110 C.3 1 ABA -0.0610
|
| 32 |
+
20 N 22.4370 23.4550 32.9850 N.am 1 SAR -0.2556
|
| 33 |
+
21 CA 22.7530 24.2310 31.7840 C.3 1 SAR 0.1227
|
| 34 |
+
22 C 21.8890 25.4770 31.7220 C.2 1 SAR 0.2032
|
| 35 |
+
23 O 22.4380 26.5820 31.8240 O.2 1 SAR -0.3945
|
| 36 |
+
24 CN 22.5040 24.1330 34.3240 C.3 1 SAR 0.0252
|
| 37 |
+
25 N 20.5610 25.4020 31.5630 N.am 1 MLE -0.2531
|
| 38 |
+
26 CN 19.8060 24.1180 31.4110 C.3 1 MLE 0.0254
|
| 39 |
+
27 CA 19.8060 26.6410 31.6360 C.3 1 MLE 0.1336
|
| 40 |
+
28 CB 18.8020 26.7980 30.4630 C.3 1 MLE -0.0099
|
| 41 |
+
29 CG 19.2410 26.7740 29.0070 C.3 1 MLE -0.0425
|
| 42 |
+
30 CD1 18.1090 27.3330 28.2070 C.3 1 MLE -0.0625
|
| 43 |
+
31 CD2 20.4750 27.6040 28.7660 C.3 1 MLE -0.0625
|
| 44 |
+
32 C 19.0260 26.6620 32.9400 C.2 1 MLE 0.2041
|
| 45 |
+
33 O 17.9400 26.0870 33.0190 O.2 1 MLE -0.3944
|
| 46 |
+
34 N 19.5510 27.2830 33.9870 N.am 1 VAL -0.2635
|
| 47 |
+
35 CA 18.8550 27.2650 35.2730 C.3 1 VAL 0.1334
|
| 48 |
+
36 C 17.6390 28.1970 35.1550 C.2 1 VAL 0.2064
|
| 49 |
+
37 O 17.8230 29.3330 34.6680 O.2 1 VAL -0.3942
|
| 50 |
+
38 CB 19.8570 27.7120 36.3910 C.3 1 VAL -0.0062
|
| 51 |
+
39 CG1 19.2480 27.6570 37.7810 C.3 1 VAL -0.0584
|
| 52 |
+
40 CG2 20.9950 26.7130 36.4350 C.3 1 VAL -0.0584
|
| 53 |
+
41 N 16.4200 27.7640 35.5270 N.am 1 MLE -0.2529
|
| 54 |
+
42 CN 16.0990 26.4210 36.1460 C.3 1 MLE 0.0254
|
| 55 |
+
43 CA 15.3170 28.7060 35.3180 C.3 1 MLE 0.1336
|
| 56 |
+
44 CB 14.1770 28.0320 34.4760 C.3 1 MLE -0.0099
|
| 57 |
+
45 CG 14.5560 27.5070 33.0700 C.3 1 MLE -0.0425
|
| 58 |
+
46 CD1 13.3920 26.7640 32.4830 C.3 1 MLE -0.0625
|
| 59 |
+
47 CD2 14.9660 28.6610 32.1610 C.3 1 MLE -0.0625
|
| 60 |
+
48 C 14.7750 29.2460 36.6330 C.2 1 MLE 0.2041
|
| 61 |
+
49 O 15.3970 29.0760 37.6910 O.2 1 MLE -0.3944
|
| 62 |
+
50 N 13.6560 29.9590 36.6130 N.am 1 ALA -0.2640
|
| 63 |
+
51 CA 13.1010 30.4870 37.8450 C.3 1 ALA 0.1282
|
| 64 |
+
52 C 12.2480 29.4460 38.5560 C.2 1 ALA 0.2036
|
| 65 |
+
53 O 11.8650 28.4130 37.9930 O.2 1 ALA -0.3944
|
| 66 |
+
54 CB 12.2330 31.6860 37.5390 C.3 1 ALA -0.0244
|
| 67 |
+
55 N 11.9290 29.6810 39.8240 N.am 1 DSN -0.2640
|
| 68 |
+
56 CA 11.0110 28.8140 40.5310 C.3 1 DSN 0.1284
|
| 69 |
+
57 CB 10.2310 29.6540 41.5470 C.3 1 DSN -0.0244
|
| 70 |
+
58 C 11.8240 27.7370 41.2330 C.2 1 DSN 0.2059
|
| 71 |
+
59 O 12.8870 28.0900 41.7540 O.2 1 DSN -0.3942
|
| 72 |
+
60 N 11.4120 26.4490 41.2480 N.am 1 MLE -0.2529
|
| 73 |
+
61 CN 10.1460 25.9790 40.5870 C.3 1 MLE 0.0254
|
| 74 |
+
62 CA 12.1940 25.4390 41.9500 C.3 1 MLE 0.1338
|
| 75 |
+
63 CB 11.4160 24.9440 43.1690 C.3 1 MLE -0.0099
|
| 76 |
+
64 CG 11.1370 25.9780 44.2790 C.3 1 MLE -0.0425
|
| 77 |
+
65 CD1 10.1820 25.3880 45.3080 C.3 1 MLE -0.0625
|
| 78 |
+
66 CD2 12.4400 26.3920 44.9250 C.3 1 MLE -0.0625
|
| 79 |
+
67 C 12.4990 24.2780 41.0180 C.2 1 MLE 0.2064
|
| 80 |
+
68 O 11.9090 23.1940 41.1050 O.2 1 MLE -0.3942
|
| 81 |
+
69 N 13.4040 24.4830 40.0570 N.am 1 MLE -0.2529
|
| 82 |
+
70 CN 14.1810 25.7700 39.8510 C.3 1 MLE 0.0254
|
| 83 |
+
71 CA 13.6890 23.3650 39.1600 C.3 1 MLE 0.1338
|
| 84 |
+
72 CB 13.5350 23.8540 37.6860 C.3 1 MLE -0.0099
|
| 85 |
+
73 CG 12.1210 24.3150 37.2570 C.3 1 MLE -0.0425
|
| 86 |
+
74 CD1 12.1520 24.7230 35.8030 C.3 1 MLE -0.0625
|
| 87 |
+
75 CD2 11.1100 23.2080 37.4880 C.3 1 MLE -0.0625
|
| 88 |
+
76 C 15.0710 22.7590 39.4000 C.2 1 MLE 0.2064
|
| 89 |
+
77 O 15.8570 23.3220 40.1800 O.2 1 MLE -0.3942
|
| 90 |
+
78 N 15.4250 21.5970 38.8280 N.am 1 MVA -0.2526
|
| 91 |
+
79 CN 14.4220 20.6910 38.1640 C.3 1 MVA 0.0254
|
| 92 |
+
80 CA 16.8050 21.1250 39.0330 C.3 1 MVA 0.1359
|
| 93 |
+
81 CB 16.8680 19.8150 39.8580 C.3 1 MVA -0.0061
|
| 94 |
+
82 CG1 18.3280 19.5720 40.2350 C.3 1 MVA -0.0584
|
| 95 |
+
83 CG2 16.0200 19.8890 41.1280 C.3 1 MVA -0.0584
|
| 96 |
+
84 C 17.4000 20.8750 37.6340 C.2 1 MVA 0.2067
|
| 97 |
+
85 O 17.4330 19.7040 37.1720 O.2 1 MVA -0.3942
|
| 98 |
+
86 H1 18.2335 24.0290 36.7749 H 1 BMT 0.0488
|
| 99 |
+
87 H2 18.6708 23.2467 38.3316 H 1 BMT 0.0488
|
| 100 |
+
88 H3 16.9500 23.5991 37.9557 H 1 BMT 0.0488
|
| 101 |
+
89 H4 18.1102 20.6128 35.3376 H 1 BMT 0.0828
|
| 102 |
+
90 H5 17.8721 22.1572 33.4759 H 1 BMT 0.0646
|
| 103 |
+
91 H6 17.6261 24.4316 33.9759 H 1 BMT 0.2101
|
| 104 |
+
92 H7 15.8032 22.8473 35.6558 H 1 BMT 0.0345
|
| 105 |
+
93 H8 14.4954 20.9954 34.6325 H 1 BMT 0.0235
|
| 106 |
+
94 H9 16.0666 20.4236 35.2890 H 1 BMT 0.0235
|
| 107 |
+
95 H10 15.8637 20.6560 33.5194 H 1 BMT 0.0235
|
| 108 |
+
96 H11 15.7444 24.4002 33.7175 H 1 BMT 0.0391
|
| 109 |
+
97 H12 14.2724 23.3781 33.8409 H 1 BMT 0.0391
|
| 110 |
+
98 H13 15.5200 21.8513 31.9546 H 1 BMT 0.0450
|
| 111 |
+
99 H14 15.7760 24.8336 31.3813 H 1 BMT 0.0447
|
| 112 |
+
100 H15 16.1052 24.1510 29.0801 H 1 BMT 0.0353
|
| 113 |
+
101 H16 15.0655 22.7244 29.4123 H 1 BMT 0.0353
|
| 114 |
+
102 H17 16.8371 22.6297 29.6938 H 1 BMT 0.0353
|
| 115 |
+
103 H18 19.7517 21.0784 33.5197 H 1 ABA 0.1883
|
| 116 |
+
104 H19 22.3087 21.7206 34.9456 H 1 ABA 0.0800
|
| 117 |
+
105 H20 23.3252 19.8375 33.7184 H 1 ABA 0.0310
|
| 118 |
+
106 H21 21.7487 19.4860 32.9325 H 1 ABA 0.0310
|
| 119 |
+
107 H22 22.2095 17.8893 34.7752 H 1 ABA 0.0232
|
| 120 |
+
108 H23 20.7738 18.9018 35.1495 H 1 ABA 0.0232
|
| 121 |
+
109 H24 22.3503 19.2533 35.9354 H 1 ABA 0.0232
|
| 122 |
+
110 H25 22.5650 23.6140 30.8930 H 1 SAR 0.0765
|
| 123 |
+
111 H26 23.8127 24.5248 31.8097 H 1 SAR 0.0765
|
| 124 |
+
112 H27 22.2394 23.4135 35.1129 H 1 SAR 0.0488
|
| 125 |
+
113 H28 21.7971 24.9756 34.3442 H 1 SAR 0.0488
|
| 126 |
+
114 H29 23.5244 24.5062 34.4954 H 1 SAR 0.0488
|
| 127 |
+
115 H30 20.5153 23.2781 31.3713 H 1 MLE 0.0488
|
| 128 |
+
116 H31 19.2184 24.1459 30.4815 H 1 MLE 0.0488
|
| 129 |
+
117 H32 19.1297 23.9866 32.2685 H 1 MLE 0.0488
|
| 130 |
+
118 H33 20.5106 27.4854 31.6147 H 1 MLE 0.0802
|
| 131 |
+
119 H34 18.3014 27.7655 30.6159 H 1 MLE 0.0315
|
| 132 |
+
120 H35 18.0701 25.9846 30.5755 H 1 MLE 0.0315
|
| 133 |
+
121 H36 19.4430 25.7365 28.7024 H 1 MLE 0.0298
|
| 134 |
+
122 H37 18.3800 27.3364 27.1409 H 1 MLE 0.0232
|
| 135 |
+
123 H38 17.9007 28.3619 28.5356 H 1 MLE 0.0232
|
| 136 |
+
124 H39 17.2132 26.7121 28.3556 H 1 MLE 0.0232
|
| 137 |
+
125 H40 21.3114 27.1964 29.3529 H 1 MLE 0.0232
|
| 138 |
+
126 H41 20.2838 28.6429 29.0728 H 1 MLE 0.0232
|
| 139 |
+
127 H42 20.7309 27.5786 27.6965 H 1 MLE 0.0232
|
| 140 |
+
128 H43 20.4232 27.7639 33.8974 H 1 VAL 0.1883
|
| 141 |
+
129 H44 18.5060 26.2459 35.4956 H 1 VAL 0.0803
|
| 142 |
+
130 H45 20.2242 28.7260 36.1741 H 1 VAL 0.0343
|
| 143 |
+
131 H46 19.9945 27.9803 38.5214 H 1 VAL 0.0234
|
| 144 |
+
132 H47 18.9338 26.6265 38.0032 H 1 VAL 0.0234
|
| 145 |
+
133 H48 18.3747 28.3243 37.8254 H 1 VAL 0.0234
|
| 146 |
+
134 H49 21.4982 26.6872 35.4572 H 1 VAL 0.0234
|
| 147 |
+
135 H50 20.5975 25.7144 36.6692 H 1 VAL 0.0234
|
| 148 |
+
136 H51 21.7156 27.0120 37.2104 H 1 VAL 0.0234
|
| 149 |
+
137 H52 17.0220 25.8297 36.2381 H 1 MLE 0.0488
|
| 150 |
+
138 H53 15.3822 25.8846 35.5069 H 1 MLE 0.0488
|
| 151 |
+
139 H54 15.6596 26.5724 37.1430 H 1 MLE 0.0488
|
| 152 |
+
140 H55 15.7068 29.5582 34.7420 H 1 MLE 0.0802
|
| 153 |
+
141 H56 13.3762 28.7751 34.3476 H 1 MLE 0.0315
|
| 154 |
+
142 H57 13.7961 27.1790 35.0567 H 1 MLE 0.0315
|
| 155 |
+
143 H58 15.4065 26.8161 33.1662 H 1 MLE 0.0298
|
| 156 |
+
144 H59 13.6614 26.3909 31.4839 H 1 MLE 0.0232
|
| 157 |
+
145 H60 12.5286 27.4407 32.4012 H 1 MLE 0.0232
|
| 158 |
+
146 H61 13.1327 25.9157 33.1335 H 1 MLE 0.0232
|
| 159 |
+
147 H62 15.8192 29.1934 32.6066 H 1 MLE 0.0232
|
| 160 |
+
148 H63 14.1205 29.3551 32.0456 H 1 MLE 0.0232
|
| 161 |
+
149 H64 15.2541 28.2668 31.1753 H 1 MLE 0.0232
|
| 162 |
+
150 H65 13.1928 30.1333 35.7440 H 1 ALA 0.1883
|
| 163 |
+
151 H66 13.9259 30.7906 38.5063 H 1 ALA 0.0797
|
| 164 |
+
152 H67 11.8139 32.0837 38.4751 H 1 ALA 0.0277
|
| 165 |
+
153 H68 11.4139 31.3845 36.8696 H 1 ALA 0.0277
|
| 166 |
+
154 H69 12.8394 32.4624 37.0498 H 1 ALA 0.0277
|
| 167 |
+
155 H70 12.3283 30.4670 40.2960 H 1 DSN 0.1883
|
| 168 |
+
156 H71 10.3104 28.3470 39.8232 H 1 DSN 0.0797
|
| 169 |
+
157 H72 9.5277 29.0085 42.0935 H 1 DSN 0.0277
|
| 170 |
+
158 H73 9.6722 30.4413 41.0199 H 1 DSN 0.0277
|
| 171 |
+
159 H74 10.9329 30.1154 42.2572 H 1 DSN 0.0277
|
| 172 |
+
160 H75 9.6515 26.8297 40.0952 H 1 MLE 0.0488
|
| 173 |
+
161 H76 9.4731 25.5521 41.3452 H 1 MLE 0.0488
|
| 174 |
+
162 H77 10.3871 25.2114 39.8369 H 1 MLE 0.0488
|
| 175 |
+
163 H78 13.1411 25.8866 42.2858 H 1 MLE 0.0802
|
| 176 |
+
164 H79 11.9891 24.1194 43.6180 H 1 MLE 0.0315
|
| 177 |
+
165 H80 10.4459 24.5658 42.8143 H 1 MLE 0.0315
|
| 178 |
+
166 H81 10.6672 26.8658 43.8306 H 1 MLE 0.0298
|
| 179 |
+
167 H82 9.9877 26.1305 46.0960 H 1 MLE 0.0232
|
| 180 |
+
168 H83 10.6331 24.4894 45.7541 H 1 MLE 0.0232
|
| 181 |
+
169 H84 9.2353 25.1180 44.8172 H 1 MLE 0.0232
|
| 182 |
+
170 H85 13.1100 26.8139 44.1614 H 1 MLE 0.0232
|
| 183 |
+
171 H86 12.9161 25.5139 45.3858 H 1 MLE 0.0232
|
| 184 |
+
172 H87 12.2418 27.1494 45.6977 H 1 MLE 0.0232
|
| 185 |
+
173 H88 13.8608 26.5146 40.5946 H 1 MLE 0.0488
|
| 186 |
+
174 H89 13.9890 26.1563 38.8391 H 1 MLE 0.0488
|
| 187 |
+
175 H90 15.2565 25.5721 39.9700 H 1 MLE 0.0488
|
| 188 |
+
176 H91 12.9429 22.5782 39.3450 H 1 MLE 0.0802
|
| 189 |
+
177 H92 13.8312 23.0254 37.0260 H 1 MLE 0.0315
|
| 190 |
+
178 H93 14.2213 24.7014 37.5413 H 1 MLE 0.0315
|
| 191 |
+
179 H94 11.8309 25.1857 37.8633 H 1 MLE 0.0298
|
| 192 |
+
180 H95 11.1491 25.0516 35.4930 H 1 MLE 0.0232
|
| 193 |
+
181 H96 12.4633 23.8657 35.1881 H 1 MLE 0.0232
|
| 194 |
+
182 H97 12.8661 25.5489 35.6690 H 1 MLE 0.0232
|
| 195 |
+
183 H98 11.1074 22.9301 38.5523 H 1 MLE 0.0232
|
| 196 |
+
184 H99 11.3808 22.3316 36.8809 H 1 MLE 0.0232
|
| 197 |
+
185 H100 10.1087 23.5595 37.1984 H 1 MLE 0.0232
|
| 198 |
+
186 H101 13.4522 21.2056 38.0953 H 1 MVA 0.0488
|
| 199 |
+
187 H102 14.3083 19.7721 38.7579 H 1 MVA 0.0488
|
| 200 |
+
188 H103 14.7728 20.4336 37.1537 H 1 MVA 0.0488
|
| 201 |
+
189 H104 17.3828 21.9021 39.5548 H 1 MVA 0.0804
|
| 202 |
+
190 H105 16.5032 18.9826 39.2382 H 1 MVA 0.0343
|
| 203 |
+
191 H106 18.4055 18.6458 40.8234 H 1 MVA 0.0234
|
| 204 |
+
192 H107 18.6981 20.4181 40.8327 H 1 MVA 0.0234
|
| 205 |
+
193 H108 18.9319 19.4770 39.3205 H 1 MVA 0.0234
|
| 206 |
+
194 H109 14.9684 20.0640 40.8570 H 1 MVA 0.0234
|
| 207 |
+
195 H110 16.3780 20.7148 41.7603 H 1 MVA 0.0234
|
| 208 |
+
196 H111 16.1034 18.9414 41.6804 H 1 MVA 0.0234
|
| 209 |
+
@<TRIPOS>BOND
|
| 210 |
+
1 1 2 1
|
| 211 |
+
2 1 3 1
|
| 212 |
+
3 1 84 am
|
| 213 |
+
4 3 4 1
|
| 214 |
+
5 3 6 1
|
| 215 |
+
6 4 5 2
|
| 216 |
+
7 4 14 am
|
| 217 |
+
8 6 7 1
|
| 218 |
+
9 6 8 1
|
| 219 |
+
10 8 9 1
|
| 220 |
+
11 8 10 1
|
| 221 |
+
12 10 11 1
|
| 222 |
+
13 11 12 2
|
| 223 |
+
14 12 13 1
|
| 224 |
+
15 14 15 1
|
| 225 |
+
16 15 16 1
|
| 226 |
+
17 15 18 1
|
| 227 |
+
18 16 17 2
|
| 228 |
+
19 16 20 am
|
| 229 |
+
20 18 19 1
|
| 230 |
+
21 20 21 1
|
| 231 |
+
22 20 24 1
|
| 232 |
+
23 21 22 1
|
| 233 |
+
24 22 23 2
|
| 234 |
+
25 22 25 am
|
| 235 |
+
26 25 26 1
|
| 236 |
+
27 25 27 1
|
| 237 |
+
28 27 28 1
|
| 238 |
+
29 27 32 1
|
| 239 |
+
30 28 29 1
|
| 240 |
+
31 29 30 1
|
| 241 |
+
32 29 31 1
|
| 242 |
+
33 32 33 2
|
| 243 |
+
34 32 34 am
|
| 244 |
+
35 34 35 1
|
| 245 |
+
36 35 36 1
|
| 246 |
+
37 35 38 1
|
| 247 |
+
38 36 37 2
|
| 248 |
+
39 36 41 am
|
| 249 |
+
40 38 39 1
|
| 250 |
+
41 38 40 1
|
| 251 |
+
42 41 42 1
|
| 252 |
+
43 41 43 1
|
| 253 |
+
44 43 44 1
|
| 254 |
+
45 43 48 1
|
| 255 |
+
46 44 45 1
|
| 256 |
+
47 45 46 1
|
| 257 |
+
48 45 47 1
|
| 258 |
+
49 48 49 2
|
| 259 |
+
50 48 50 am
|
| 260 |
+
51 50 51 1
|
| 261 |
+
52 51 52 1
|
| 262 |
+
53 51 54 1
|
| 263 |
+
54 52 53 2
|
| 264 |
+
55 52 55 am
|
| 265 |
+
56 55 56 1
|
| 266 |
+
57 56 57 1
|
| 267 |
+
58 56 58 1
|
| 268 |
+
59 58 59 2
|
| 269 |
+
60 58 60 am
|
| 270 |
+
61 60 61 1
|
| 271 |
+
62 60 62 1
|
| 272 |
+
63 62 63 1
|
| 273 |
+
64 62 67 1
|
| 274 |
+
65 63 64 1
|
| 275 |
+
66 64 65 1
|
| 276 |
+
67 64 66 1
|
| 277 |
+
68 67 68 2
|
| 278 |
+
69 67 69 am
|
| 279 |
+
70 69 70 1
|
| 280 |
+
71 69 71 1
|
| 281 |
+
72 71 72 1
|
| 282 |
+
73 71 76 1
|
| 283 |
+
74 72 73 1
|
| 284 |
+
75 73 74 1
|
| 285 |
+
76 73 75 1
|
| 286 |
+
77 76 77 2
|
| 287 |
+
78 76 78 am
|
| 288 |
+
79 78 79 1
|
| 289 |
+
80 78 80 1
|
| 290 |
+
81 80 81 1
|
| 291 |
+
82 80 84 1
|
| 292 |
+
83 81 82 1
|
| 293 |
+
84 81 83 1
|
| 294 |
+
85 84 85 2
|
| 295 |
+
86 2 86 1
|
| 296 |
+
87 2 87 1
|
| 297 |
+
88 2 88 1
|
| 298 |
+
89 3 89 1
|
| 299 |
+
90 6 90 1
|
| 300 |
+
91 7 91 1
|
| 301 |
+
92 8 92 1
|
| 302 |
+
93 9 93 1
|
| 303 |
+
94 9 94 1
|
| 304 |
+
95 9 95 1
|
| 305 |
+
96 10 96 1
|
| 306 |
+
97 10 97 1
|
| 307 |
+
98 11 98 1
|
| 308 |
+
99 12 99 1
|
| 309 |
+
100 13 100 1
|
| 310 |
+
101 13 101 1
|
| 311 |
+
102 13 102 1
|
| 312 |
+
103 14 103 1
|
| 313 |
+
104 15 104 1
|
| 314 |
+
105 18 105 1
|
| 315 |
+
106 18 106 1
|
| 316 |
+
107 19 107 1
|
| 317 |
+
108 19 108 1
|
| 318 |
+
109 19 109 1
|
| 319 |
+
110 21 110 1
|
| 320 |
+
111 21 111 1
|
| 321 |
+
112 24 112 1
|
| 322 |
+
113 24 113 1
|
| 323 |
+
114 24 114 1
|
| 324 |
+
115 26 115 1
|
| 325 |
+
116 26 116 1
|
| 326 |
+
117 26 117 1
|
| 327 |
+
118 27 118 1
|
| 328 |
+
119 28 119 1
|
| 329 |
+
120 28 120 1
|
| 330 |
+
121 29 121 1
|
| 331 |
+
122 30 122 1
|
| 332 |
+
123 30 123 1
|
| 333 |
+
124 30 124 1
|
| 334 |
+
125 31 125 1
|
| 335 |
+
126 31 126 1
|
| 336 |
+
127 31 127 1
|
| 337 |
+
128 34 128 1
|
| 338 |
+
129 35 129 1
|
| 339 |
+
130 38 130 1
|
| 340 |
+
131 39 131 1
|
| 341 |
+
132 39 132 1
|
| 342 |
+
133 39 133 1
|
| 343 |
+
134 40 134 1
|
| 344 |
+
135 40 135 1
|
| 345 |
+
136 40 136 1
|
| 346 |
+
137 42 137 1
|
| 347 |
+
138 42 138 1
|
| 348 |
+
139 42 139 1
|
| 349 |
+
140 43 140 1
|
| 350 |
+
141 44 141 1
|
| 351 |
+
142 44 142 1
|
| 352 |
+
143 45 143 1
|
| 353 |
+
144 46 144 1
|
| 354 |
+
145 46 145 1
|
| 355 |
+
146 46 146 1
|
| 356 |
+
147 47 147 1
|
| 357 |
+
148 47 148 1
|
| 358 |
+
149 47 149 1
|
| 359 |
+
150 50 150 1
|
| 360 |
+
151 51 151 1
|
| 361 |
+
152 54 152 1
|
| 362 |
+
153 54 153 1
|
| 363 |
+
154 54 154 1
|
| 364 |
+
155 55 155 1
|
| 365 |
+
156 56 156 1
|
| 366 |
+
157 57 157 1
|
| 367 |
+
158 57 158 1
|
| 368 |
+
159 57 159 1
|
| 369 |
+
160 61 160 1
|
| 370 |
+
161 61 161 1
|
| 371 |
+
162 61 162 1
|
| 372 |
+
163 62 163 1
|
| 373 |
+
164 63 164 1
|
| 374 |
+
165 63 165 1
|
| 375 |
+
166 64 166 1
|
| 376 |
+
167 65 167 1
|
| 377 |
+
168 65 168 1
|
| 378 |
+
169 65 169 1
|
| 379 |
+
170 66 170 1
|
| 380 |
+
171 66 171 1
|
| 381 |
+
172 66 172 1
|
| 382 |
+
173 70 173 1
|
| 383 |
+
174 70 174 1
|
| 384 |
+
175 70 175 1
|
| 385 |
+
176 71 176 1
|
| 386 |
+
177 72 177 1
|
| 387 |
+
178 72 178 1
|
| 388 |
+
179 73 179 1
|
| 389 |
+
180 74 180 1
|
| 390 |
+
181 74 181 1
|
| 391 |
+
182 74 182 1
|
| 392 |
+
183 75 183 1
|
| 393 |
+
184 75 184 1
|
| 394 |
+
185 75 185 1
|
| 395 |
+
186 79 186 1
|
| 396 |
+
187 79 187 1
|
| 397 |
+
188 79 188 1
|
| 398 |
+
189 80 189 1
|
| 399 |
+
190 81 190 1
|
| 400 |
+
191 82 191 1
|
| 401 |
+
192 82 192 1
|
| 402 |
+
193 82 193 1
|
| 403 |
+
194 83 194 1
|
| 404 |
+
195 83 195 1
|
| 405 |
+
196 83 196 1
|
| 406 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 407 |
+
1 BMT 1
|
| 408 |
+
|
1cyn/1cyn_ligand.sdf
ADDED
|
@@ -0,0 +1,398 @@
|
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|
|
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|
|
|
|
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|
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|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
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| 1 |
+
1cyn_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
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|
| 4 |
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196196 0 0 0 0 0 0 0 0999 V2000
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| 40 |
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| 171 |
+
9.2444 25.1208 44.8205 H 0 0 0 0 0
|
| 172 |
+
10.6301 24.4977 45.7492 H 0 0 0 0 0
|
| 173 |
+
9.9903 26.1246 46.0882 H 0 0 0 0 0
|
| 174 |
+
12.9238 25.5164 45.3578 H 0 0 0 0 0
|
| 175 |
+
13.0927 26.8345 44.1725 H 0 0 0 0 0
|
| 176 |
+
12.2395 27.1225 45.7087 H 0 0 0 0 0
|
| 177 |
+
13.4845 26.5876 39.6651 H 0 0 0 0 0
|
| 178 |
+
14.7669 25.9862 40.7444 H 0 0 0 0 0
|
| 179 |
+
14.8478 25.6575 38.9961 H 0 0 0 0 0
|
| 180 |
+
12.9744 22.5674 39.3632 H 0 0 0 0 0
|
| 181 |
+
13.7779 22.9979 37.0565 H 0 0 0 0 0
|
| 182 |
+
14.1803 24.7270 37.5881 H 0 0 0 0 0
|
| 183 |
+
11.8186 25.1713 37.8597 H 0 0 0 0 0
|
| 184 |
+
12.8600 25.5413 35.6716 H 0 0 0 0 0
|
| 185 |
+
12.4606 23.8727 35.1949 H 0 0 0 0 0
|
| 186 |
+
11.1577 25.0484 35.4970 H 0 0 0 0 0
|
| 187 |
+
11.3912 22.3328 36.9023 H 0 0 0 0 0
|
| 188 |
+
11.0930 22.9483 38.5465 H 0 0 0 0 0
|
| 189 |
+
10.1218 23.5502 37.1807 H 0 0 0 0 0
|
| 190 |
+
13.6732 20.3833 38.8939 H 0 0 0 0 0
|
| 191 |
+
13.9369 21.2251 37.3470 H 0 0 0 0 0
|
| 192 |
+
14.9325 19.8112 37.7722 H 0 0 0 0 0
|
| 193 |
+
17.3617 21.8750 39.5948 H 0 0 0 0 0
|
| 194 |
+
16.4683 19.0005 39.2538 H 0 0 0 0 0
|
| 195 |
+
18.9253 19.4781 39.3281 H 0 0 0 0 0
|
| 196 |
+
18.6935 20.4110 40.8271 H 0 0 0 0 0
|
| 197 |
+
18.4035 18.6541 40.8179 H 0 0 0 0 0
|
| 198 |
+
16.3804 20.7030 41.7571 H 0 0 0 0 0
|
| 199 |
+
14.9794 20.0697 40.8585 H 0 0 0 0 0
|
| 200 |
+
16.0978 18.9469 41.6707 H 0 0 0 0 0
|
| 201 |
+
1 2 1 0 0 0
|
| 202 |
+
1 3 1 0 0 0
|
| 203 |
+
1 84 1 0 0 0
|
| 204 |
+
3 4 1 0 0 0
|
| 205 |
+
3 6 1 0 0 0
|
| 206 |
+
4 5 2 0 0 0
|
| 207 |
+
4 14 1 0 0 0
|
| 208 |
+
6 7 1 0 0 0
|
| 209 |
+
6 8 1 0 0 0
|
| 210 |
+
8 9 1 0 0 0
|
| 211 |
+
8 10 1 0 0 0
|
| 212 |
+
10 11 1 0 0 0
|
| 213 |
+
11 12 2 0 0 0
|
| 214 |
+
12 13 1 0 0 0
|
| 215 |
+
14 15 1 0 0 0
|
| 216 |
+
15 16 1 0 0 0
|
| 217 |
+
15 18 1 0 0 0
|
| 218 |
+
16 17 2 0 0 0
|
| 219 |
+
16 20 1 0 0 0
|
| 220 |
+
18 19 1 0 0 0
|
| 221 |
+
20 21 1 0 0 0
|
| 222 |
+
20 24 1 0 0 0
|
| 223 |
+
21 22 1 0 0 0
|
| 224 |
+
22 23 2 0 0 0
|
| 225 |
+
22 25 1 0 0 0
|
| 226 |
+
25 26 1 0 0 0
|
| 227 |
+
25 27 1 0 0 0
|
| 228 |
+
27 28 1 0 0 0
|
| 229 |
+
27 32 1 0 0 0
|
| 230 |
+
28 29 1 0 0 0
|
| 231 |
+
29 30 1 0 0 0
|
| 232 |
+
29 31 1 0 0 0
|
| 233 |
+
32 33 2 0 0 0
|
| 234 |
+
32 34 1 0 0 0
|
| 235 |
+
34 35 1 0 0 0
|
| 236 |
+
35 36 1 0 0 0
|
| 237 |
+
35 38 1 0 0 0
|
| 238 |
+
36 37 2 0 0 0
|
| 239 |
+
36 41 1 0 0 0
|
| 240 |
+
38 39 1 0 0 0
|
| 241 |
+
38 40 1 0 0 0
|
| 242 |
+
41 42 1 0 0 0
|
| 243 |
+
41 43 1 0 0 0
|
| 244 |
+
43 44 1 0 0 0
|
| 245 |
+
43 48 1 0 0 0
|
| 246 |
+
44 45 1 0 0 0
|
| 247 |
+
45 46 1 0 0 0
|
| 248 |
+
45 47 1 0 0 0
|
| 249 |
+
48 49 2 0 0 0
|
| 250 |
+
48 50 1 0 0 0
|
| 251 |
+
50 51 1 0 0 0
|
| 252 |
+
51 52 1 0 0 0
|
| 253 |
+
51 54 1 0 0 0
|
| 254 |
+
52 53 2 0 0 0
|
| 255 |
+
52 55 1 0 0 0
|
| 256 |
+
55 56 1 0 0 0
|
| 257 |
+
56 57 1 0 0 0
|
| 258 |
+
56 58 1 0 0 0
|
| 259 |
+
58 59 2 0 0 0
|
| 260 |
+
58 60 1 0 0 0
|
| 261 |
+
60 61 1 0 0 0
|
| 262 |
+
60 62 1 0 0 0
|
| 263 |
+
62 63 1 0 0 0
|
| 264 |
+
62 67 1 0 0 0
|
| 265 |
+
63 64 1 0 0 0
|
| 266 |
+
64 65 1 0 0 0
|
| 267 |
+
64 66 1 0 0 0
|
| 268 |
+
67 68 2 0 0 0
|
| 269 |
+
67 69 1 0 0 0
|
| 270 |
+
69 70 1 0 0 0
|
| 271 |
+
69 71 1 0 0 0
|
| 272 |
+
71 72 1 0 0 0
|
| 273 |
+
71 76 1 0 0 0
|
| 274 |
+
72 73 1 0 0 0
|
| 275 |
+
73 74 1 0 0 0
|
| 276 |
+
73 75 1 0 0 0
|
| 277 |
+
76 77 2 0 0 0
|
| 278 |
+
76 78 1 0 0 0
|
| 279 |
+
78 79 1 0 0 0
|
| 280 |
+
78 80 1 0 0 0
|
| 281 |
+
80 81 1 0 0 0
|
| 282 |
+
80 84 1 0 0 0
|
| 283 |
+
81 82 1 0 0 0
|
| 284 |
+
81 83 1 0 0 0
|
| 285 |
+
84 85 2 0 0 0
|
| 286 |
+
2 86 1 0 0 0
|
| 287 |
+
2 87 1 0 0 0
|
| 288 |
+
2 88 1 0 0 0
|
| 289 |
+
3 89 1 0 0 0
|
| 290 |
+
6 90 1 0 0 0
|
| 291 |
+
7 91 1 0 0 0
|
| 292 |
+
8 92 1 0 0 0
|
| 293 |
+
9 93 1 0 0 0
|
| 294 |
+
9 94 1 0 0 0
|
| 295 |
+
9 95 1 0 0 0
|
| 296 |
+
10 96 1 0 0 0
|
| 297 |
+
10 97 1 0 0 0
|
| 298 |
+
11 98 1 0 0 0
|
| 299 |
+
12 99 1 0 0 0
|
| 300 |
+
13100 1 0 0 0
|
| 301 |
+
13101 1 0 0 0
|
| 302 |
+
13102 1 0 0 0
|
| 303 |
+
14103 1 0 0 0
|
| 304 |
+
15104 1 0 0 0
|
| 305 |
+
18105 1 0 0 0
|
| 306 |
+
18106 1 0 0 0
|
| 307 |
+
19107 1 0 0 0
|
| 308 |
+
19108 1 0 0 0
|
| 309 |
+
19109 1 0 0 0
|
| 310 |
+
21110 1 0 0 0
|
| 311 |
+
21111 1 0 0 0
|
| 312 |
+
24112 1 0 0 0
|
| 313 |
+
24113 1 0 0 0
|
| 314 |
+
24114 1 0 0 0
|
| 315 |
+
26115 1 0 0 0
|
| 316 |
+
26116 1 0 0 0
|
| 317 |
+
26117 1 0 0 0
|
| 318 |
+
27118 1 0 0 0
|
| 319 |
+
28119 1 0 0 0
|
| 320 |
+
28120 1 0 0 0
|
| 321 |
+
29121 1 0 0 0
|
| 322 |
+
30122 1 0 0 0
|
| 323 |
+
30123 1 0 0 0
|
| 324 |
+
30124 1 0 0 0
|
| 325 |
+
31125 1 0 0 0
|
| 326 |
+
31126 1 0 0 0
|
| 327 |
+
31127 1 0 0 0
|
| 328 |
+
34128 1 0 0 0
|
| 329 |
+
35129 1 0 0 0
|
| 330 |
+
38130 1 0 0 0
|
| 331 |
+
39131 1 0 0 0
|
| 332 |
+
39132 1 0 0 0
|
| 333 |
+
39133 1 0 0 0
|
| 334 |
+
40134 1 0 0 0
|
| 335 |
+
40135 1 0 0 0
|
| 336 |
+
40136 1 0 0 0
|
| 337 |
+
42137 1 0 0 0
|
| 338 |
+
42138 1 0 0 0
|
| 339 |
+
42139 1 0 0 0
|
| 340 |
+
43140 1 0 0 0
|
| 341 |
+
44141 1 0 0 0
|
| 342 |
+
44142 1 0 0 0
|
| 343 |
+
45143 1 0 0 0
|
| 344 |
+
46144 1 0 0 0
|
| 345 |
+
46145 1 0 0 0
|
| 346 |
+
46146 1 0 0 0
|
| 347 |
+
47147 1 0 0 0
|
| 348 |
+
47148 1 0 0 0
|
| 349 |
+
47149 1 0 0 0
|
| 350 |
+
50150 1 0 0 0
|
| 351 |
+
51151 1 0 0 0
|
| 352 |
+
54152 1 0 0 0
|
| 353 |
+
54153 1 0 0 0
|
| 354 |
+
54154 1 0 0 0
|
| 355 |
+
55155 1 0 0 0
|
| 356 |
+
56156 1 0 0 0
|
| 357 |
+
57157 1 0 0 0
|
| 358 |
+
57158 1 0 0 0
|
| 359 |
+
57159 1 0 0 0
|
| 360 |
+
61160 1 0 0 0
|
| 361 |
+
61161 1 0 0 0
|
| 362 |
+
61162 1 0 0 0
|
| 363 |
+
62163 1 0 0 0
|
| 364 |
+
63164 1 0 0 0
|
| 365 |
+
63165 1 0 0 0
|
| 366 |
+
64166 1 0 0 0
|
| 367 |
+
65167 1 0 0 0
|
| 368 |
+
65168 1 0 0 0
|
| 369 |
+
65169 1 0 0 0
|
| 370 |
+
66170 1 0 0 0
|
| 371 |
+
66171 1 0 0 0
|
| 372 |
+
66172 1 0 0 0
|
| 373 |
+
70173 1 0 0 0
|
| 374 |
+
70174 1 0 0 0
|
| 375 |
+
70175 1 0 0 0
|
| 376 |
+
71176 1 0 0 0
|
| 377 |
+
72177 1 0 0 0
|
| 378 |
+
72178 1 0 0 0
|
| 379 |
+
73179 1 0 0 0
|
| 380 |
+
74180 1 0 0 0
|
| 381 |
+
74181 1 0 0 0
|
| 382 |
+
74182 1 0 0 0
|
| 383 |
+
75183 1 0 0 0
|
| 384 |
+
75184 1 0 0 0
|
| 385 |
+
75185 1 0 0 0
|
| 386 |
+
79186 1 0 0 0
|
| 387 |
+
79187 1 0 0 0
|
| 388 |
+
79188 1 0 0 0
|
| 389 |
+
80189 1 0 0 0
|
| 390 |
+
81190 1 0 0 0
|
| 391 |
+
82191 1 0 0 0
|
| 392 |
+
82192 1 0 0 0
|
| 393 |
+
82193 1 0 0 0
|
| 394 |
+
83194 1 0 0 0
|
| 395 |
+
83195 1 0 0 0
|
| 396 |
+
83196 1 0 0 0
|
| 397 |
+
M END
|
| 398 |
+
$$$$
|
1cyn/1cyn_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1cyn/1cyn_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1o34/1o34_ligand.mol2
ADDED
|
@@ -0,0 +1,80 @@
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|
|
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|
|
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|
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|
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|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
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|
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|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:50 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1o34_ligand
|
| 7 |
+
31 33 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 43.9810 -3.0230 26.2160 C.ar 1 801 0.0117
|
| 14 |
+
2 C2 44.5110 -1.7140 26.2640 C.ar 1 801 -0.0689
|
| 15 |
+
3 C3 44.4860 -0.9620 27.4130 C.ar 1 801 -0.0391
|
| 16 |
+
4 C4 43.9310 -1.5300 28.5240 C.ar 1 801 0.0823
|
| 17 |
+
5 C5 43.3970 -2.7740 28.5200 C.ar 1 801 0.0333
|
| 18 |
+
6 C6 43.4050 -3.5600 27.3670 C.ar 1 801 -0.0555
|
| 19 |
+
7 C7 44.0540 -3.7690 25.0350 C.cat 1 801 0.2292
|
| 20 |
+
8 N1 43.7670 -5.0590 25.0530 N.pl3 1 801 -0.2732
|
| 21 |
+
9 N2 44.4230 -3.1350 23.9350 N.pl3 1 801 -0.2732
|
| 22 |
+
10 N3 43.7780 -1.0920 29.7220 N.pl3 1 801 -0.2489
|
| 23 |
+
11 N4 42.9210 -3.1120 29.7000 N.2 1 801 -0.3040
|
| 24 |
+
12 C8 43.1860 -2.0210 30.3930 C.2 1 801 0.1548
|
| 25 |
+
13 C1' 42.9830 -1.8940 31.7530 C.ar 1 801 0.1348
|
| 26 |
+
14 N2' 42.6900 -2.9800 32.4360 N.ar 1 801 -0.2910
|
| 27 |
+
15 C3' 42.4890 -2.9900 33.7380 C.ar 1 801 0.0036
|
| 28 |
+
16 C4' 42.5700 -1.7940 34.4430 C.ar 1 801 -0.0391
|
| 29 |
+
17 C5' 42.8780 -0.6150 33.7670 C.ar 1 801 -0.0077
|
| 30 |
+
18 C6' 43.1010 -0.6600 32.4020 C.ar 1 801 0.1359
|
| 31 |
+
19 O6' 43.4180 0.4850 31.7020 O.3 1 801 -0.3190
|
| 32 |
+
20 H1 44.9502 -1.2910 25.3678 H 1 801 0.0547
|
| 33 |
+
21 H2 44.8910 0.0432 27.4370 H 1 801 0.0547
|
| 34 |
+
22 H3 42.9772 -4.5560 27.3660 H 1 801 0.0554
|
| 35 |
+
23 H4 43.8200 -5.6105 24.1847 H 1 801 0.3180
|
| 36 |
+
24 H5 43.4903 -5.5128 25.9353 H 1 801 0.3180
|
| 37 |
+
25 H6 44.6372 -2.1281 23.9682 H 1 801 0.3180
|
| 38 |
+
26 H7 44.4963 -3.6480 23.0449 H 1 801 0.3180
|
| 39 |
+
27 H8 44.0726 -0.1720 30.0794 H 1 801 0.2302
|
| 40 |
+
28 H9 42.2637 -3.9172 34.2524 H 1 801 0.0749
|
| 41 |
+
29 H10 42.3945 -1.7790 35.5126 H 1 801 0.0707
|
| 42 |
+
30 H11 42.9421 0.3249 34.3033 H 1 801 0.0671
|
| 43 |
+
31 H12 44.2220 0.8542 32.0483 H 1 801 0.2544
|
| 44 |
+
@<TRIPOS>BOND
|
| 45 |
+
1 1 2 ar
|
| 46 |
+
2 1 6 ar
|
| 47 |
+
3 1 7 1
|
| 48 |
+
4 2 3 ar
|
| 49 |
+
5 3 4 ar
|
| 50 |
+
6 4 5 ar
|
| 51 |
+
7 4 10 1
|
| 52 |
+
8 5 6 ar
|
| 53 |
+
9 5 11 1
|
| 54 |
+
10 7 8 ar
|
| 55 |
+
11 7 9 ar
|
| 56 |
+
12 10 12 1
|
| 57 |
+
13 11 12 2
|
| 58 |
+
14 12 13 1
|
| 59 |
+
15 13 14 ar
|
| 60 |
+
16 13 18 ar
|
| 61 |
+
17 14 15 ar
|
| 62 |
+
18 15 16 ar
|
| 63 |
+
19 16 17 ar
|
| 64 |
+
20 17 18 ar
|
| 65 |
+
21 18 19 1
|
| 66 |
+
22 2 20 1
|
| 67 |
+
23 3 21 1
|
| 68 |
+
24 6 22 1
|
| 69 |
+
25 8 23 1
|
| 70 |
+
26 8 24 1
|
| 71 |
+
27 9 25 1
|
| 72 |
+
28 9 26 1
|
| 73 |
+
29 10 27 1
|
| 74 |
+
30 15 28 1
|
| 75 |
+
31 16 29 1
|
| 76 |
+
32 17 30 1
|
| 77 |
+
33 19 31 1
|
| 78 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 79 |
+
1 801 1
|
| 80 |
+
|
1o34/1o34_ligand.sdf
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1o34_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
29 31 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
43.9810 -3.0230 26.2160 C 0 0 0 0 0
|
| 6 |
+
44.5110 -1.7140 26.2640 C 0 0 0 0 0
|
| 7 |
+
44.4860 -0.9620 27.4130 C 0 0 0 0 0
|
| 8 |
+
43.9310 -1.5300 28.5240 C 0 0 0 0 0
|
| 9 |
+
43.3970 -2.7740 28.5200 C 0 0 0 0 0
|
| 10 |
+
43.4050 -3.5600 27.3670 C 0 0 0 0 0
|
| 11 |
+
44.0540 -3.7690 25.0350 C 0 0 0 0 0
|
| 12 |
+
43.7670 -5.0590 25.0530 N 0 0 0 0 0
|
| 13 |
+
44.4230 -3.1350 23.9350 N 0 0 0 0 0
|
| 14 |
+
43.7780 -1.0920 29.7220 N 0 0 0 0 0
|
| 15 |
+
42.9210 -3.1120 29.7000 N 0 0 0 0 0
|
| 16 |
+
43.1860 -2.0210 30.3930 C 0 0 0 0 0
|
| 17 |
+
42.9830 -1.8940 31.7530 C 0 0 0 0 0
|
| 18 |
+
42.6900 -2.9800 32.4360 N 0 0 0 0 0
|
| 19 |
+
42.4890 -2.9900 33.7380 C 0 0 0 0 0
|
| 20 |
+
42.5700 -1.7940 34.4430 C 0 0 0 0 0
|
| 21 |
+
42.8780 -0.6150 33.7670 C 0 0 0 0 0
|
| 22 |
+
43.1010 -0.6600 32.4020 C 0 0 0 0 0
|
| 23 |
+
43.4180 0.4850 31.7020 O 0 0 0 0 0
|
| 24 |
+
44.9526 -1.2886 25.3628 H 0 0 0 0 0
|
| 25 |
+
44.8933 0.0488 27.4372 H 0 0 0 0 0
|
| 26 |
+
42.9749 -4.5615 27.3660 H 0 0 0 0 0
|
| 27 |
+
43.8261 -5.6066 24.1945 H 0 0 0 0 0
|
| 28 |
+
44.4956 -3.6431 23.0535 H 0 0 0 0 0
|
| 29 |
+
44.6351 -2.1378 23.9679 H 0 0 0 0 0
|
| 30 |
+
42.2625 -3.9223 34.2552 H 0 0 0 0 0
|
| 31 |
+
42.3935 -1.7789 35.5185 H 0 0 0 0 0
|
| 32 |
+
42.9424 0.3301 34.3062 H 0 0 0 0 0
|
| 33 |
+
43.4550 1.2290 32.3076 H 0 0 0 0 0
|
| 34 |
+
1 2 4 0 0 0
|
| 35 |
+
1 6 4 0 0 0
|
| 36 |
+
1 7 1 0 0 0
|
| 37 |
+
2 3 4 0 0 0
|
| 38 |
+
3 4 4 0 0 0
|
| 39 |
+
4 5 4 0 0 0
|
| 40 |
+
4 10 4 0 0 0
|
| 41 |
+
5 6 4 0 0 0
|
| 42 |
+
5 11 4 0 0 0
|
| 43 |
+
7 8 2 0 0 0
|
| 44 |
+
7 9 1 0 0 0
|
| 45 |
+
10 12 4 0 0 0
|
| 46 |
+
11 12 4 0 0 0
|
| 47 |
+
12 13 1 0 0 0
|
| 48 |
+
13 14 4 0 0 0
|
| 49 |
+
13 18 4 0 0 0
|
| 50 |
+
14 15 4 0 0 0
|
| 51 |
+
15 16 4 0 0 0
|
| 52 |
+
16 17 4 0 0 0
|
| 53 |
+
17 18 4 0 0 0
|
| 54 |
+
18 19 1 0 0 0
|
| 55 |
+
2 20 1 0 0 0
|
| 56 |
+
3 21 1 0 0 0
|
| 57 |
+
6 22 1 0 0 0
|
| 58 |
+
8 23 1 0 0 0
|
| 59 |
+
9 24 1 0 0 0
|
| 60 |
+
9 25 1 0 0 0
|
| 61 |
+
15 26 1 0 0 0
|
| 62 |
+
16 27 1 0 0 0
|
| 63 |
+
17 28 1 0 0 0
|
| 64 |
+
19 29 1 0 0 0
|
| 65 |
+
M END
|
| 66 |
+
$$$$
|
1o34/1o34_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1o34/1o34_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1q54/1q54_ligand.mol2
ADDED
|
@@ -0,0 +1,67 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:50 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1q54_ligand
|
| 7 |
+
26 25 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 O1 9.3570 10.2090 13.0290 O.3 1 BHI -0.3879
|
| 14 |
+
2 O2 11.8560 2.8650 10.9670 O.co2 1 BHI -0.5891
|
| 15 |
+
3 O3 9.8540 1.6410 10.8650 O.co2 1 BHI -0.5891
|
| 16 |
+
4 O4 10.9590 2.0290 12.9380 O.co2 1 BHI -0.5891
|
| 17 |
+
5 P5 10.6890 2.6520 11.6000 P.3 1 BHI 0.2069
|
| 18 |
+
6 O6 9.9440 3.9800 11.7780 O.3 1 BHI -0.1548
|
| 19 |
+
7 O7 11.0340 6.1220 11.5380 O.co2 1 BHI -0.5556
|
| 20 |
+
8 O8 11.7170 4.5940 13.2600 O.co2 1 BHI -0.5556
|
| 21 |
+
9 P9 10.6270 5.2160 12.4240 P.3 1 BHI 0.3275
|
| 22 |
+
10 C10 10.3350 9.4300 15.3610 C.3 1 BHI 0.0320
|
| 23 |
+
11 C11 11.0890 8.2680 13.3380 C.3 1 BHI -0.0352
|
| 24 |
+
12 C12 8.8750 6.8560 13.0410 C.3 1 BHI 0.0871
|
| 25 |
+
13 C13 8.7600 7.8970 14.1700 C.3 1 BHI 0.0052
|
| 26 |
+
14 C14 9.8540 8.9860 13.9510 C.3 1 BHI 0.0753
|
| 27 |
+
15 O15 9.6200 5.7080 13.4550 O.3 1 BHI -0.2462
|
| 28 |
+
16 BR 8.7290 9.3740 16.2740 Br 1 BHI -0.0888
|
| 29 |
+
17 H1 8.6105 10.6301 13.4388 H 1 BHI 0.2102
|
| 30 |
+
18 H2 11.0697 8.7280 15.7823 H 1 BHI 0.0410
|
| 31 |
+
19 H3 10.7624 10.4435 15.3469 H 1 BHI 0.0410
|
| 32 |
+
20 H4 11.3965 7.4416 13.9957 H 1 BHI 0.0257
|
| 33 |
+
21 H5 11.9175 8.9846 13.2379 H 1 BHI 0.0257
|
| 34 |
+
22 H6 10.8269 7.8696 12.3467 H 1 BHI 0.0257
|
| 35 |
+
23 H7 9.3807 7.3178 12.1802 H 1 BHI 0.0622
|
| 36 |
+
24 H8 7.8645 6.5376 12.7452 H 1 BHI 0.0622
|
| 37 |
+
25 H9 8.9130 7.4076 15.1432 H 1 BHI 0.0319
|
| 38 |
+
26 H10 7.7634 8.3620 14.1461 H 1 BHI 0.0319
|
| 39 |
+
@<TRIPOS>BOND
|
| 40 |
+
1 14 1 1
|
| 41 |
+
2 5 2 ar
|
| 42 |
+
3 6 5 1
|
| 43 |
+
4 9 6 1
|
| 44 |
+
5 13 12 1
|
| 45 |
+
6 14 13 1
|
| 46 |
+
7 12 15 1
|
| 47 |
+
8 10 16 1
|
| 48 |
+
9 15 9 1
|
| 49 |
+
10 14 11 1
|
| 50 |
+
11 14 10 1
|
| 51 |
+
12 9 8 ar
|
| 52 |
+
13 9 7 ar
|
| 53 |
+
14 5 4 ar
|
| 54 |
+
15 5 3 ar
|
| 55 |
+
16 1 17 1
|
| 56 |
+
17 10 18 1
|
| 57 |
+
18 10 19 1
|
| 58 |
+
19 11 20 1
|
| 59 |
+
20 11 21 1
|
| 60 |
+
21 11 22 1
|
| 61 |
+
22 12 23 1
|
| 62 |
+
23 12 24 1
|
| 63 |
+
24 13 25 1
|
| 64 |
+
25 13 26 1
|
| 65 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 66 |
+
1 BHI 1
|
| 67 |
+
|
1q54/1q54_ligand.sdf
ADDED
|
@@ -0,0 +1,63 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1q54_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
29 28 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
9.3570 10.2090 13.0290 O 0 0 0 0 0
|
| 6 |
+
11.8560 2.8650 10.9670 O 0 0 0 0 0
|
| 7 |
+
9.8540 1.6410 10.8650 O 0 0 0 0 0
|
| 8 |
+
10.9590 2.0290 12.9380 O 0 0 0 0 0
|
| 9 |
+
10.6890 2.6520 11.6000 P 0 0 0 0 0
|
| 10 |
+
9.9440 3.9800 11.7780 O 0 0 0 0 0
|
| 11 |
+
11.0340 6.1220 11.5380 O 0 0 0 0 0
|
| 12 |
+
11.7170 4.5940 13.2600 O 0 0 0 0 0
|
| 13 |
+
10.6270 5.2160 12.4240 P 0 0 0 0 0
|
| 14 |
+
10.3350 9.4300 15.3610 C 0 0 0 0 0
|
| 15 |
+
11.0890 8.2680 13.3380 C 0 0 0 0 0
|
| 16 |
+
8.8750 6.8560 13.0410 C 0 0 0 0 0
|
| 17 |
+
8.7600 7.8970 14.1700 C 0 0 0 0 0
|
| 18 |
+
9.8540 8.9860 13.9510 C 0 0 0 0 0
|
| 19 |
+
9.6200 5.7080 13.4550 O 0 0 0 0 0
|
| 20 |
+
8.7290 9.3740 16.2740 Br 0 0 0 0 0
|
| 21 |
+
10.0699 10.8443 12.9305 H 0 0 0 0 0
|
| 22 |
+
9.0282 1.5067 11.3357 H 0 0 0 0 0
|
| 23 |
+
10.1272 1.8758 13.3921 H 0 0 0 0 0
|
| 24 |
+
11.3303 3.9575 13.8657 H 0 0 0 0 0
|
| 25 |
+
11.1199 8.8058 15.7882 H 0 0 0 0 0
|
| 26 |
+
10.8345 10.3985 15.3840 H 0 0 0 0 0
|
| 27 |
+
11.4402 7.4999 14.0271 H 0 0 0 0 0
|
| 28 |
+
10.8069 7.8072 12.3913 H 0 0 0 0 0
|
| 29 |
+
11.8828 8.9952 13.1673 H 0 0 0 0 0
|
| 30 |
+
9.3930 7.3169 12.2000 H 0 0 0 0 0
|
| 31 |
+
7.8704 6.5334 12.7673 H 0 0 0 0 0
|
| 32 |
+
8.9029 7.4148 15.1370 H 0 0 0 0 0
|
| 33 |
+
7.7708 8.3546 14.1552 H 0 0 0 0 0
|
| 34 |
+
14 1 1 0 0 0
|
| 35 |
+
5 2 2 0 0 0
|
| 36 |
+
6 5 1 0 0 0
|
| 37 |
+
9 6 1 0 0 0
|
| 38 |
+
13 12 1 0 0 0
|
| 39 |
+
14 13 1 0 0 0
|
| 40 |
+
12 15 1 0 0 0
|
| 41 |
+
10 16 1 0 0 0
|
| 42 |
+
15 9 1 0 0 0
|
| 43 |
+
14 11 1 0 0 0
|
| 44 |
+
14 10 1 0 0 0
|
| 45 |
+
9 8 1 0 0 0
|
| 46 |
+
9 7 2 0 0 0
|
| 47 |
+
5 4 1 0 0 0
|
| 48 |
+
5 3 1 0 0 0
|
| 49 |
+
1 17 1 0 0 0
|
| 50 |
+
3 18 1 0 0 0
|
| 51 |
+
4 19 1 0 0 0
|
| 52 |
+
8 20 1 0 0 0
|
| 53 |
+
10 21 1 0 0 0
|
| 54 |
+
10 22 1 0 0 0
|
| 55 |
+
11 23 1 0 0 0
|
| 56 |
+
11 24 1 0 0 0
|
| 57 |
+
11 25 1 0 0 0
|
| 58 |
+
12 26 1 0 0 0
|
| 59 |
+
12 27 1 0 0 0
|
| 60 |
+
13 28 1 0 0 0
|
| 61 |
+
13 29 1 0 0 0
|
| 62 |
+
M END
|
| 63 |
+
$$$$
|
1q54/1q54_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1q54/1q54_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1q6j/1q6j_ligand.mol2
ADDED
|
@@ -0,0 +1,150 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:50 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1q6j_ligand
|
| 7 |
+
65 69 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C32 0.4820 71.4830 69.2300 C.3 1 335 0.0105
|
| 14 |
+
2 C33 1.3310 72.4560 68.3620 C.ar 1 335 -0.0160
|
| 15 |
+
3 C4A 0.6810 73.2000 67.3600 C.ar 1 335 -0.0289
|
| 16 |
+
4 C4B 2.7520 72.6320 68.5170 C.ar 1 335 -0.0289
|
| 17 |
+
5 C5A 1.3640 74.0790 66.5340 C.ar 1 335 -0.0385
|
| 18 |
+
6 C5B 3.4480 73.5260 67.6790 C.ar 1 335 -0.0385
|
| 19 |
+
7 C36 2.7590 74.2570 66.6840 C.ar 1 335 0.0219
|
| 20 |
+
8 C37 3.4560 75.2230 65.7700 C.3 1 335 0.2931
|
| 21 |
+
9 F38 4.5250 75.6610 66.4490 F 1 335 -0.2419
|
| 22 |
+
10 F39 2.6210 76.2410 65.5850 F 1 335 -0.2419
|
| 23 |
+
11 P40 3.9410 74.6300 64.2370 P.3 1 335 0.0966
|
| 24 |
+
12 O41 2.7150 74.1080 63.4420 O.co2 1 335 -0.5668
|
| 25 |
+
13 O42 4.8420 73.5320 64.4310 O.co2 1 335 -0.5668
|
| 26 |
+
14 O43 4.5860 75.7480 63.4380 O.co2 1 335 -0.5668
|
| 27 |
+
15 C1 -0.0220 72.0300 70.6650 C.3 1 335 0.1158
|
| 28 |
+
16 C12 -0.8750 73.3690 70.5080 C.3 1 335 0.0105
|
| 29 |
+
17 C13 -2.0620 73.3090 69.5600 C.ar 1 335 -0.0160
|
| 30 |
+
18 C1A -2.2070 74.3620 68.5890 C.ar 1 335 -0.0289
|
| 31 |
+
19 C1B -3.0570 72.2710 69.5830 C.ar 1 335 -0.0289
|
| 32 |
+
20 C2A -3.2710 74.3890 67.6930 C.ar 1 335 -0.0385
|
| 33 |
+
21 C2B -4.1520 72.2930 68.6580 C.ar 1 335 -0.0385
|
| 34 |
+
22 C16 -4.2600 73.3680 67.7000 C.ar 1 335 0.0219
|
| 35 |
+
23 C17 -5.4340 73.4420 66.7040 C.3 1 335 0.2931
|
| 36 |
+
24 F18 -6.1310 72.3100 66.7870 F 1 335 -0.2419
|
| 37 |
+
25 F19 -4.9840 73.5090 65.4310 F 1 335 -0.2419
|
| 38 |
+
26 P20 -6.4920 74.7070 67.0300 P.3 1 335 0.0966
|
| 39 |
+
27 O21 -5.8660 76.0850 66.6980 O.co2 1 335 -0.5668
|
| 40 |
+
28 O22 -6.8410 74.6890 68.4930 O.co2 1 335 -0.5668
|
| 41 |
+
29 O23 -7.7320 74.5580 66.1800 O.co2 1 335 -0.5668
|
| 42 |
+
30 C51 1.2510 72.3320 71.6180 C.ar 1 335 -0.0102
|
| 43 |
+
31 C6A 2.1790 71.2970 71.9600 C.ar 1 335 -0.0362
|
| 44 |
+
32 C6B 1.4730 73.6660 72.1620 C.ar 1 335 -0.0362
|
| 45 |
+
33 C55 3.4780 72.9190 73.3360 C.ar 1 335 -0.0340
|
| 46 |
+
34 C53 3.2830 71.5720 72.8050 C.ar 1 335 -0.0323
|
| 47 |
+
35 C54 2.5660 73.9590 73.0050 C.ar 1 335 -0.0323
|
| 48 |
+
36 N61 -0.8100 70.8030 71.1680 N.pl3 1 335 -0.1785
|
| 49 |
+
37 N62 -1.2360 69.6580 70.5090 N.2 1 335 -0.0826
|
| 50 |
+
38 N63 -1.8440 68.9850 71.4840 N.2 1 335 -0.2001
|
| 51 |
+
39 C7A -1.8960 69.5190 72.7480 C.ar 1 335 0.0753
|
| 52 |
+
40 C7B -1.1940 70.8120 72.6240 C.ar 1 335 0.1061
|
| 53 |
+
41 C8A -2.4300 69.1020 73.9920 C.ar 1 335 -0.0506
|
| 54 |
+
42 C8B -1.0610 71.6540 73.8130 C.ar 1 335 -0.0323
|
| 55 |
+
43 C9A -2.2860 69.9510 75.1510 C.ar 1 335 -0.0707
|
| 56 |
+
44 C9B -1.5980 71.2350 75.0590 C.ar 1 335 -0.0695
|
| 57 |
+
45 H1 1.0898 70.5845 69.4122 H 1 335 0.0439
|
| 58 |
+
46 H2 -0.4100 71.2103 68.6469 H 1 335 0.0439
|
| 59 |
+
47 H3 -0.3887 73.0819 67.2298 H 1 335 0.0652
|
| 60 |
+
48 H4 3.2866 72.0763 69.2789 H 1 335 0.0652
|
| 61 |
+
49 H5 0.8275 74.6314 65.7711 H 1 335 0.0835
|
| 62 |
+
50 H6 4.5178 73.6540 67.7979 H 1 335 0.0835
|
| 63 |
+
51 H7 -0.1976 74.1565 70.1461 H 1 335 0.0439
|
| 64 |
+
52 H8 -1.2556 73.6416 71.5034 H 1 335 0.0439
|
| 65 |
+
53 H9 -1.4680 75.1544 68.5551 H 1 335 0.0652
|
| 66 |
+
54 H10 -2.9785 71.4662 70.3049 H 1 335 0.0652
|
| 67 |
+
55 H11 -3.3470 75.2009 66.9788 H 1 335 0.0835
|
| 68 |
+
56 H12 -4.8964 71.5053 68.6777 H 1 335 0.0835
|
| 69 |
+
57 H13 2.0362 70.2958 71.5698 H 1 335 0.0851
|
| 70 |
+
58 H14 0.7765 74.4579 71.9111 H 1 335 0.0851
|
| 71 |
+
59 H15 4.3212 73.1266 73.9849 H 1 335 0.0856
|
| 72 |
+
60 H16 3.9825 70.7832 73.0572 H 1 335 0.0698
|
| 73 |
+
61 H17 2.7083 74.9607 73.3941 H 1 335 0.0698
|
| 74 |
+
62 H18 -2.9438 68.1510 74.0734 H 1 335 0.0596
|
| 75 |
+
63 H19 -0.5479 72.6063 73.7422 H 1 335 0.0566
|
| 76 |
+
64 H20 -2.6945 69.6304 76.1025 H 1 335 0.0540
|
| 77 |
+
65 H21 -1.4977 71.8644 75.9358 H 1 335 0.0580
|
| 78 |
+
@<TRIPOS>BOND
|
| 79 |
+
1 1 2 1
|
| 80 |
+
2 1 15 1
|
| 81 |
+
3 2 3 ar
|
| 82 |
+
4 2 4 ar
|
| 83 |
+
5 3 5 ar
|
| 84 |
+
6 4 6 ar
|
| 85 |
+
7 5 7 ar
|
| 86 |
+
8 6 7 ar
|
| 87 |
+
9 7 8 1
|
| 88 |
+
10 8 9 1
|
| 89 |
+
11 8 10 1
|
| 90 |
+
12 8 11 1
|
| 91 |
+
13 11 12 ar
|
| 92 |
+
14 11 13 ar
|
| 93 |
+
15 11 14 ar
|
| 94 |
+
16 15 16 1
|
| 95 |
+
17 15 30 1
|
| 96 |
+
18 15 36 1
|
| 97 |
+
19 16 17 1
|
| 98 |
+
20 17 18 ar
|
| 99 |
+
21 17 19 ar
|
| 100 |
+
22 18 20 ar
|
| 101 |
+
23 19 21 ar
|
| 102 |
+
24 20 22 ar
|
| 103 |
+
25 21 22 ar
|
| 104 |
+
26 22 23 1
|
| 105 |
+
27 23 24 1
|
| 106 |
+
28 23 25 1
|
| 107 |
+
29 23 26 1
|
| 108 |
+
30 26 27 ar
|
| 109 |
+
31 26 28 ar
|
| 110 |
+
32 26 29 ar
|
| 111 |
+
33 30 31 ar
|
| 112 |
+
34 30 32 ar
|
| 113 |
+
35 31 34 ar
|
| 114 |
+
36 32 35 ar
|
| 115 |
+
37 36 37 1
|
| 116 |
+
38 36 40 1
|
| 117 |
+
39 37 38 2
|
| 118 |
+
40 38 39 1
|
| 119 |
+
41 39 40 ar
|
| 120 |
+
42 39 41 ar
|
| 121 |
+
43 40 42 ar
|
| 122 |
+
44 41 43 ar
|
| 123 |
+
45 42 44 ar
|
| 124 |
+
46 43 44 ar
|
| 125 |
+
47 35 33 ar
|
| 126 |
+
48 34 33 ar
|
| 127 |
+
49 1 45 1
|
| 128 |
+
50 1 46 1
|
| 129 |
+
51 3 47 1
|
| 130 |
+
52 4 48 1
|
| 131 |
+
53 5 49 1
|
| 132 |
+
54 6 50 1
|
| 133 |
+
55 16 51 1
|
| 134 |
+
56 16 52 1
|
| 135 |
+
57 18 53 1
|
| 136 |
+
58 19 54 1
|
| 137 |
+
59 20 55 1
|
| 138 |
+
60 21 56 1
|
| 139 |
+
61 31 57 1
|
| 140 |
+
62 32 58 1
|
| 141 |
+
63 33 59 1
|
| 142 |
+
64 34 60 1
|
| 143 |
+
65 35 61 1
|
| 144 |
+
66 41 62 1
|
| 145 |
+
67 42 63 1
|
| 146 |
+
68 43 64 1
|
| 147 |
+
69 44 65 1
|
| 148 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 149 |
+
1 335 1
|
| 150 |
+
|
1q6j/1q6j_ligand.sdf
ADDED
|
@@ -0,0 +1,148 @@
|
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|
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|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
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|
|
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|
|
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|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1q6j_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
69 73 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
0.4820 71.4830 69.2300 C 0 0 0 0 0
|
| 6 |
+
1.3310 72.4560 68.3620 C 0 0 0 0 0
|
| 7 |
+
0.6810 73.2000 67.3600 C 0 0 0 0 0
|
| 8 |
+
2.7520 72.6320 68.5170 C 0 0 0 0 0
|
| 9 |
+
1.3640 74.0790 66.5340 C 0 0 0 0 0
|
| 10 |
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3.4480 73.5260 67.6790 C 0 0 0 0 0
|
| 11 |
+
2.7590 74.2570 66.6840 C 0 0 0 0 0
|
| 12 |
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3.4560 75.2230 65.7700 C 0 0 0 0 0
|
| 13 |
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4.5250 75.6610 66.4490 F 0 0 0 0 0
|
| 14 |
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2.6210 76.2410 65.5850 F 0 0 0 0 0
|
| 15 |
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3.9410 74.6300 64.2370 P 0 0 0 0 0
|
| 16 |
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2.7150 74.1080 63.4420 O 0 0 0 0 0
|
| 17 |
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4.8420 73.5320 64.4310 O 0 0 0 0 0
|
| 18 |
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4.5860 75.7480 63.4380 O 0 0 0 0 0
|
| 19 |
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-0.0220 72.0300 70.6650 C 0 0 0 0 0
|
| 20 |
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-0.8750 73.3690 70.5080 C 0 0 0 0 0
|
| 21 |
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-2.0620 73.3090 69.5600 C 0 0 0 0 0
|
| 22 |
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-2.2070 74.3620 68.5890 C 0 0 0 0 0
|
| 23 |
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-3.0570 72.2710 69.5830 C 0 0 0 0 0
|
| 24 |
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-3.2710 74.3890 67.6930 C 0 0 0 0 0
|
| 25 |
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-4.1520 72.2930 68.6580 C 0 0 0 0 0
|
| 26 |
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-4.2600 73.3680 67.7000 C 0 0 0 0 0
|
| 27 |
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-5.4340 73.4420 66.7040 C 0 0 0 0 0
|
| 28 |
+
-6.1310 72.3100 66.7870 F 0 0 0 0 0
|
| 29 |
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-4.9840 73.5090 65.4310 F 0 0 0 0 0
|
| 30 |
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-6.4920 74.7070 67.0300 P 0 0 0 0 0
|
| 31 |
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-5.8660 76.0850 66.6980 O 0 0 0 0 0
|
| 32 |
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-6.8410 74.6890 68.4930 O 0 0 0 0 0
|
| 33 |
+
-7.7320 74.5580 66.1800 O 0 0 0 0 0
|
| 34 |
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1.2510 72.3320 71.6180 C 0 0 0 0 0
|
| 35 |
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2.1790 71.2970 71.9600 C 0 0 0 0 0
|
| 36 |
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1.4730 73.6660 72.1620 C 0 0 0 0 0
|
| 37 |
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3.4780 72.9190 73.3360 C 0 0 0 0 0
|
| 38 |
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3.2830 71.5720 72.8050 C 0 0 0 0 0
|
| 39 |
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2.5660 73.9590 73.0050 C 0 0 0 0 0
|
| 40 |
+
-0.8100 70.8030 71.1680 N 0 0 0 0 0
|
| 41 |
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-1.2360 69.6580 70.5090 N 0 0 0 0 0
|
| 42 |
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-1.8440 68.9850 71.4840 N 0 0 0 0 0
|
| 43 |
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-1.8960 69.5190 72.7480 C 0 0 0 0 0
|
| 44 |
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-1.1940 70.8120 72.6240 C 0 0 0 0 0
|
| 45 |
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-2.4300 69.1020 73.9920 C 0 0 0 0 0
|
| 46 |
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-1.0610 71.6540 73.8130 C 0 0 0 0 0
|
| 47 |
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-2.2860 69.9510 75.1510 C 0 0 0 0 0
|
| 48 |
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-1.5980 71.2350 75.0590 C 0 0 0 0 0
|
| 49 |
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1.1305 70.6339 69.4461 H 0 0 0 0 0
|
| 50 |
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-0.4213 71.2815 68.6542 H 0 0 0 0 0
|
| 51 |
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-0.3946 73.0813 67.2291 H 0 0 0 0 0
|
| 52 |
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3.2896 72.0733 69.2831 H 0 0 0 0 0
|
| 53 |
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0.8245 74.6345 65.7669 H 0 0 0 0 0
|
| 54 |
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4.5237 73.6547 67.7986 H 0 0 0 0 0
|
| 55 |
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2.0966 74.8285 63.3001 H 0 0 0 0 0
|
| 56 |
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3.9569 76.4647 63.3272 H 0 0 0 0 0
|
| 57 |
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-0.1950 74.1135 70.0940 H 0 0 0 0 0
|
| 58 |
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-1.2867 73.5823 71.4945 H 0 0 0 0 0
|
| 59 |
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-1.4639 75.1587 68.5549 H 0 0 0 0 0
|
| 60 |
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-2.9780 71.4617 70.3089 H 0 0 0 0 0
|
| 61 |
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-3.3474 75.2054 66.9748 H 0 0 0 0 0
|
| 62 |
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-4.9005 71.5009 68.6778 H 0 0 0 0 0
|
| 63 |
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-5.6364 76.1148 65.7663 H 0 0 0 0 0
|
| 64 |
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-7.4861 74.5721 65.2521 H 0 0 0 0 0
|
| 65 |
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2.0354 70.2902 71.5677 H 0 0 0 0 0
|
| 66 |
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0.7727 74.4622 71.9097 H 0 0 0 0 0
|
| 67 |
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4.3258 73.1278 73.9885 H 0 0 0 0 0
|
| 68 |
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3.9863 70.7789 73.0586 H 0 0 0 0 0
|
| 69 |
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2.7091 74.9662 73.3963 H 0 0 0 0 0
|
| 70 |
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-2.9466 68.1457 74.0738 H 0 0 0 0 0
|
| 71 |
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-0.5451 72.6115 73.7418 H 0 0 0 0 0
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| 72 |
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|
| 73 |
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-1.4971 71.8679 75.9407 H 0 0 0 0 0
|
| 74 |
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1 2 1 0 0 0
|
| 75 |
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1 15 1 0 0 0
|
| 76 |
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2 3 4 0 0 0
|
| 77 |
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2 4 4 0 0 0
|
| 78 |
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3 5 4 0 0 0
|
| 79 |
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4 6 4 0 0 0
|
| 80 |
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5 7 4 0 0 0
|
| 81 |
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6 7 4 0 0 0
|
| 82 |
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7 8 1 0 0 0
|
| 83 |
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8 9 1 0 0 0
|
| 84 |
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8 10 1 0 0 0
|
| 85 |
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8 11 1 0 0 0
|
| 86 |
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11 12 1 0 0 0
|
| 87 |
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11 13 2 0 0 0
|
| 88 |
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11 14 1 0 0 0
|
| 89 |
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15 16 1 0 0 0
|
| 90 |
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15 30 1 0 0 0
|
| 91 |
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15 36 1 0 0 0
|
| 92 |
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16 17 1 0 0 0
|
| 93 |
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17 18 4 0 0 0
|
| 94 |
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17 19 4 0 0 0
|
| 95 |
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18 20 4 0 0 0
|
| 96 |
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19 21 4 0 0 0
|
| 97 |
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20 22 4 0 0 0
|
| 98 |
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21 22 4 0 0 0
|
| 99 |
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22 23 1 0 0 0
|
| 100 |
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23 24 1 0 0 0
|
| 101 |
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23 25 1 0 0 0
|
| 102 |
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23 26 1 0 0 0
|
| 103 |
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26 27 1 0 0 0
|
| 104 |
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26 28 2 0 0 0
|
| 105 |
+
26 29 1 0 0 0
|
| 106 |
+
30 31 4 0 0 0
|
| 107 |
+
30 32 4 0 0 0
|
| 108 |
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31 34 4 0 0 0
|
| 109 |
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32 35 4 0 0 0
|
| 110 |
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36 37 4 0 0 0
|
| 111 |
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36 40 4 0 0 0
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37 38 4 0 0 0
|
| 113 |
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38 39 4 0 0 0
|
| 114 |
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39 40 4 0 0 0
|
| 115 |
+
39 41 4 0 0 0
|
| 116 |
+
40 42 4 0 0 0
|
| 117 |
+
41 43 4 0 0 0
|
| 118 |
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42 44 4 0 0 0
|
| 119 |
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43 44 4 0 0 0
|
| 120 |
+
35 33 4 0 0 0
|
| 121 |
+
34 33 4 0 0 0
|
| 122 |
+
1 45 1 0 0 0
|
| 123 |
+
1 46 1 0 0 0
|
| 124 |
+
3 47 1 0 0 0
|
| 125 |
+
4 48 1 0 0 0
|
| 126 |
+
5 49 1 0 0 0
|
| 127 |
+
6 50 1 0 0 0
|
| 128 |
+
12 51 1 0 0 0
|
| 129 |
+
14 52 1 0 0 0
|
| 130 |
+
16 53 1 0 0 0
|
| 131 |
+
16 54 1 0 0 0
|
| 132 |
+
18 55 1 0 0 0
|
| 133 |
+
19 56 1 0 0 0
|
| 134 |
+
20 57 1 0 0 0
|
| 135 |
+
21 58 1 0 0 0
|
| 136 |
+
27 59 1 0 0 0
|
| 137 |
+
29 60 1 0 0 0
|
| 138 |
+
31 61 1 0 0 0
|
| 139 |
+
32 62 1 0 0 0
|
| 140 |
+
33 63 1 0 0 0
|
| 141 |
+
34 64 1 0 0 0
|
| 142 |
+
35 65 1 0 0 0
|
| 143 |
+
41 66 1 0 0 0
|
| 144 |
+
42 67 1 0 0 0
|
| 145 |
+
43 68 1 0 0 0
|
| 146 |
+
44 69 1 0 0 0
|
| 147 |
+
M END
|
| 148 |
+
$$$$
|
1q6j/1q6j_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1q6j/1q6j_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1vwl/1vwl_ligand.mol2
ADDED
|
@@ -0,0 +1,284 @@
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:46 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1vwl_ligand
|
| 7 |
+
132 136 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N 32.8650 14.1820 -13.2150 N.am 1 HIS -0.2644
|
| 14 |
+
2 CA 32.1150 14.4180 -11.9520 C.3 1 HIS 0.1370
|
| 15 |
+
3 C 33.2130 14.8690 -11.0020 C.2 1 HIS 0.2079
|
| 16 |
+
4 O 34.2130 14.1640 -10.9210 O.2 1 HIS -0.3940
|
| 17 |
+
5 CB 31.4320 13.1080 -11.3810 C.3 1 HIS 0.0145
|
| 18 |
+
6 CG 30.5270 13.5520 -10.1980 C.2 1 HIS -0.0027
|
| 19 |
+
7 ND1 31.0300 13.8560 -9.0070 N.2 1 HIS -0.3252
|
| 20 |
+
8 CD2 29.1370 13.7330 -10.2150 C.2 1 HIS 0.0291
|
| 21 |
+
9 CE1 29.9780 14.2200 -8.3150 C.2 1 HIS 0.0907
|
| 22 |
+
10 NE2 28.8720 14.1480 -9.0090 N.pl3 1 HIS -0.2752
|
| 23 |
+
11 H1 33.2241 13.2755 -13.4369 H 1 HIS 0.1884
|
| 24 |
+
12 H2 31.3525 15.1987 -12.0898 H 1 HIS 0.0817
|
| 25 |
+
13 H3 32.1997 12.4043 -11.0269 H 1 HIS 0.0420
|
| 26 |
+
14 H4 30.8251 12.6263 -12.1618 H 1 HIS 0.0420
|
| 27 |
+
15 H5 28.4447 13.5666 -11.0389 H 1 HIS 0.0729
|
| 28 |
+
16 H6 30.0203 14.5463 -7.2769 H 1 HIS 0.1199
|
| 29 |
+
17 H7 27.9337 14.3837 -8.6556 H 1 HIS 0.2361
|
| 30 |
+
18 N 33.0150 16.0000 -10.3280 N.am 1 PRO -0.2497
|
| 31 |
+
19 CA 33.9450 16.5280 -9.2710 C.3 1 PRO 0.1338
|
| 32 |
+
20 C 34.3510 15.5430 -8.1420 C.2 1 PRO 0.2041
|
| 33 |
+
21 O 35.1280 15.8900 -7.2660 O.2 1 PRO -0.3944
|
| 34 |
+
22 CB 33.2360 17.7980 -8.7120 C.3 1 PRO -0.0104
|
| 35 |
+
23 CG 31.7490 17.5950 -9.0920 C.3 1 PRO -0.0281
|
| 36 |
+
24 CD 31.8460 16.9520 -10.4880 C.3 1 PRO 0.0369
|
| 37 |
+
25 H8 34.8780 16.8336 -9.7671 H 1 PRO 0.0802
|
| 38 |
+
26 H9 33.6383 18.7084 -9.1802 H 1 PRO 0.0313
|
| 39 |
+
27 H10 33.3551 17.8637 -7.6205 H 1 PRO 0.0313
|
| 40 |
+
28 H11 31.2448 16.9251 -8.3800 H 1 PRO 0.0287
|
| 41 |
+
29 H12 31.2146 18.5556 -9.1331 H 1 PRO 0.0287
|
| 42 |
+
30 H13 30.9231 16.4097 -10.7412 H 1 PRO 0.0524
|
| 43 |
+
31 H14 32.0511 17.7076 -11.2606 H 1 PRO 0.0524
|
| 44 |
+
32 N 33.8230 14.3510 -8.1620 N.am 1 GLN -0.2636
|
| 45 |
+
33 CA 34.2210 13.4000 -7.0780 C.3 1 GLN 0.1330
|
| 46 |
+
34 C 35.2410 12.4280 -7.6620 C.2 1 GLN 0.2038
|
| 47 |
+
35 O 35.8770 11.7160 -6.9050 O.2 1 GLN -0.3944
|
| 48 |
+
36 CB 33.0210 12.5790 -6.5760 C.3 1 GLN 0.0045
|
| 49 |
+
37 CG 33.4550 11.8980 -5.2410 C.3 1 GLN 0.0412
|
| 50 |
+
38 CD 32.2400 11.2030 -4.7060 C.2 1 GLN 0.1737
|
| 51 |
+
39 OE1 31.1580 11.7480 -4.7710 O.2 1 GLN -0.3973
|
| 52 |
+
40 NE2 32.3700 10.0230 -4.1800 N.am 1 GLN -0.3009
|
| 53 |
+
41 H15 33.1759 14.0824 -8.8756 H 1 GLN 0.1883
|
| 54 |
+
42 H16 34.6618 13.9594 -6.2397 H 1 GLN 0.0801
|
| 55 |
+
43 H17 32.7503 11.8141 -7.3187 H 1 GLN 0.0337
|
| 56 |
+
44 H18 32.1595 13.2398 -6.3994 H 1 GLN 0.0337
|
| 57 |
+
45 H19 33.8066 12.6550 -4.5245 H 1 GLN 0.0504
|
| 58 |
+
46 H20 34.2579 11.1699 -5.4288 H 1 GLN 0.0504
|
| 59 |
+
47 H21 31.5691 9.5457 -3.8184 H 1 GLN 0.1814
|
| 60 |
+
48 H22 33.2711 9.5915 -4.1365 H 1 GLN 0.1814
|
| 61 |
+
49 N 35.3650 12.4310 -8.9600 N.am 1 GLY -0.2664
|
| 62 |
+
50 CA 36.3240 11.5150 -9.6010 C.3 1 GLY 0.1203
|
| 63 |
+
51 C 37.5950 12.2700 -9.9190 C.2 1 GLY 0.2032
|
| 64 |
+
52 O 37.6670 13.4830 -9.7270 O.2 1 GLY -0.3945
|
| 65 |
+
53 H23 34.8125 13.0513 -9.5168 H 1 GLY 0.1881
|
| 66 |
+
54 H24 35.8893 11.1183 -10.5303 H 1 GLY 0.0763
|
| 67 |
+
55 H25 36.5512 10.6831 -8.9181 H 1 GLY 0.0763
|
| 68 |
+
56 N 38.5600 11.4940 -10.3990 N.am 1 PRO -0.2501
|
| 69 |
+
57 CA 39.9210 12.0080 -10.7110 C.3 1 PRO 0.1340
|
| 70 |
+
58 C 39.8400 13.0960 -11.8160 C.2 1 PRO 0.2066
|
| 71 |
+
59 O 38.7760 13.3920 -12.3360 O.2 1 PRO -0.3942
|
| 72 |
+
60 CB 40.7500 10.7110 -11.1170 C.3 1 PRO -0.0104
|
| 73 |
+
61 CG 39.6790 9.7110 -11.6510 C.3 1 PRO -0.0281
|
| 74 |
+
62 CD 38.4480 10.0110 -10.7190 C.3 1 PRO 0.0369
|
| 75 |
+
63 H26 40.3709 12.4611 -9.8153 H 1 PRO 0.0802
|
| 76 |
+
64 H27 41.2699 10.2928 -10.2424 H 1 PRO 0.0313
|
| 77 |
+
65 H28 41.4841 10.9489 -11.9009 H 1 PRO 0.0313
|
| 78 |
+
66 H29 39.4384 9.9104 -12.7057 H 1 PRO 0.0287
|
| 79 |
+
67 H30 40.0167 8.6698 -11.5424 H 1 PRO 0.0287
|
| 80 |
+
68 H31 37.5042 9.7969 -11.2418 H 1 PRO 0.0524
|
| 81 |
+
69 H32 38.5022 9.4102 -9.7991 H 1 PRO 0.0524
|
| 82 |
+
70 N 40.9830 13.6490 -12.1440 N.am 1 PRO -0.2498
|
| 83 |
+
71 CA 41.0970 14.5530 -13.3130 C.3 1 PRO 0.1338
|
| 84 |
+
72 C 40.6770 13.7210 -14.5380 C.2 1 PRO 0.2041
|
| 85 |
+
73 O 40.5740 12.5090 -14.4700 O.2 1 PRO -0.3944
|
| 86 |
+
74 CB 42.5740 14.9830 -13.3180 C.3 1 PRO -0.0104
|
| 87 |
+
75 CG 43.0030 14.7810 -11.8150 C.3 1 PRO -0.0281
|
| 88 |
+
76 CD 42.2900 13.4780 -11.4370 C.3 1 PRO 0.0369
|
| 89 |
+
77 H33 40.4446 15.4334 -13.2168 H 1 PRO 0.0802
|
| 90 |
+
78 H34 42.6792 16.0350 -13.6218 H 1 PRO 0.0313
|
| 91 |
+
79 H35 43.1696 14.3463 -13.9887 H 1 PRO 0.0313
|
| 92 |
+
80 H36 44.0943 14.6775 -11.7239 H 1 PRO 0.0287
|
| 93 |
+
81 H37 42.6604 15.6176 -11.1883 H 1 PRO 0.0287
|
| 94 |
+
82 H38 42.8363 12.5975 -11.8061 H 1 PRO 0.0524
|
| 95 |
+
83 H39 42.1523 13.3945 -10.3489 H 1 PRO 0.0524
|
| 96 |
+
84 N 40.4630 14.3760 -15.6360 N.am 1 CYS -0.2629
|
| 97 |
+
85 CA 40.0480 13.6080 -16.8470 C.3 1 CYS 0.1399
|
| 98 |
+
86 C 41.2940 12.9800 -17.4950 C.2 1 CYS 0.2047
|
| 99 |
+
87 O 42.3430 12.9030 -16.8820 O.2 1 CYS -0.3944
|
| 100 |
+
88 CB 39.3540 14.5890 -17.7930 C.3 1 CYS 0.0341
|
| 101 |
+
89 SG 38.0800 15.6060 -17.0000 S.3 1 CYS -0.1560
|
| 102 |
+
90 H40 40.5730 15.3693 -15.6709 H 1 CYS 0.1884
|
| 103 |
+
91 H41 39.3458 12.8096 -16.5651 H 1 CYS 0.0808
|
| 104 |
+
92 H42 38.8818 14.0130 -18.6025 H 1 CYS 0.0424
|
| 105 |
+
93 H43 40.1168 15.2590 -18.2164 H 1 CYS 0.0424
|
| 106 |
+
94 N 41.1060 12.5540 -18.7160 N.am 1 LYS -0.2637
|
| 107 |
+
95 CA 42.2020 11.9200 -19.4990 C.3 1 LYS 0.1306
|
| 108 |
+
96 C 43.3270 12.9430 -19.6290 C.2 1 LYS 0.1992
|
| 109 |
+
97 O 43.1040 14.1350 -19.6150 O.2 1 LYS -0.3947
|
| 110 |
+
98 CB 41.6610 11.5360 -20.8990 C.3 1 LYS -0.0122
|
| 111 |
+
99 CG 42.7830 10.9910 -21.8130 C.3 1 LYS -0.0440
|
| 112 |
+
100 CD 42.2100 10.7190 -23.2290 C.3 1 LYS -0.0124
|
| 113 |
+
101 CE 43.3650 10.3680 -24.1860 C.3 1 LYS -0.0354
|
| 114 |
+
102 NZ 42.8330 10.1080 -25.5540 N.4 1 LYS 0.2185
|
| 115 |
+
103 H44 40.2037 12.6564 -19.1347 H 1 LYS 0.1883
|
| 116 |
+
104 H45 42.5689 11.0207 -18.9827 H 1 LYS 0.0800
|
| 117 |
+
105 H46 41.2200 12.4278 -21.3682 H 1 LYS 0.0312
|
| 118 |
+
106 H47 40.8877 10.7623 -20.7830 H 1 LYS 0.0312
|
| 119 |
+
107 H48 43.1774 10.0549 -21.3910 H 1 LYS 0.0269
|
| 120 |
+
108 H49 43.5928 11.7323 -21.8814 H 1 LYS 0.0269
|
| 121 |
+
109 H50 41.6903 11.6171 -23.5940 H 1 LYS 0.0317
|
| 122 |
+
110 H51 41.5018 9.8785 -23.1838 H 1 LYS 0.0317
|
| 123 |
+
111 H52 43.8815 9.4688 -23.8191 H 1 LYS 0.0813
|
| 124 |
+
112 H53 44.0741 11.2081 -24.2246 H 1 LYS 0.0813
|
| 125 |
+
113 H54 43.5950 9.8793 -26.1730 H 1 LYS 0.1994
|
| 126 |
+
114 H55 42.3604 10.9313 -25.8929 H 1 LYS 0.1994
|
| 127 |
+
115 H56 42.1839 9.3375 -25.5213 H 1 LYS 0.1994
|
| 128 |
+
116 N 44.5450 12.5250 -19.7620 N.am 1 NH2 -0.2990
|
| 129 |
+
117 H57 45.2929 13.1832 -19.8483 H 1 NH2 0.1815
|
| 130 |
+
118 H58 44.7380 11.5439 -19.7784 H 1 NH2 0.1815
|
| 131 |
+
119 C1 33.0430 15.1960 -14.0310 C.2 1 LEA 0.1783
|
| 132 |
+
120 O1 32.6020 16.3040 -13.7610 O.2 1 LEA -0.3969
|
| 133 |
+
121 C2 33.8290 14.9530 -15.3590 C.3 1 LEA 0.0374
|
| 134 |
+
122 C3 35.3690 14.8180 -15.0790 C.3 1 LEA -0.0353
|
| 135 |
+
123 C4 36.0580 13.8120 -16.0810 C.3 1 LEA -0.0419
|
| 136 |
+
124 C5 36.6410 14.5410 -17.3100 C.3 1 LEA -0.0060
|
| 137 |
+
125 H59 33.6591 15.8008 -16.0390 H 1 LEA 0.0502
|
| 138 |
+
126 H60 33.4655 14.0273 -15.8291 H 1 LEA 0.0502
|
| 139 |
+
127 H61 35.5140 14.4531 -14.0515 H 1 LEA 0.0290
|
| 140 |
+
128 H62 35.8391 15.8066 -15.1868 H 1 LEA 0.0290
|
| 141 |
+
129 H63 35.3108 13.0802 -16.4218 H 1 LEA 0.0275
|
| 142 |
+
130 H64 36.8718 13.2886 -15.5577 H 1 LEA 0.0275
|
| 143 |
+
131 H65 35.8449 15.1681 -17.7376 H 1 LEA 0.0376
|
| 144 |
+
132 H66 36.9399 13.7774 -18.0431 H 1 LEA 0.0376
|
| 145 |
+
@<TRIPOS>BOND
|
| 146 |
+
1 2 1 1
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| 147 |
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118 86 94 am
|
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119 1 119 am
|
| 265 |
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|
| 266 |
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@<TRIPOS>SUBSTRUCTURE
|
| 283 |
+
1 HIS 1
|
| 284 |
+
|
1vwl/1vwl_ligand.sdf
ADDED
|
@@ -0,0 +1,272 @@
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|
| 1 |
+
1vwl_ligand
|
| 2 |
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-I-interpret-
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| 3 |
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| 107 |
+
42.8332 12.5789 -11.7279 H 0 0 0 0 0
|
| 108 |
+
42.1922 13.3259 -10.3621 H 0 0 0 0 0
|
| 109 |
+
40.5752 15.3892 -15.6716 H 0 0 0 0 0
|
| 110 |
+
39.3614 12.7984 -16.5995 H 0 0 0 0 0
|
| 111 |
+
38.8609 13.9984 -18.5651 H 0 0 0 0 0
|
| 112 |
+
40.1185 15.2673 -18.1719 H 0 0 0 0 0
|
| 113 |
+
40.1856 12.6585 -19.1431 H 0 0 0 0 0
|
| 114 |
+
42.5715 11.0198 -19.0078 H 0 0 0 0 0
|
| 115 |
+
41.2420 12.4288 -21.3631 H 0 0 0 0 0
|
| 116 |
+
40.9085 10.7571 -20.7757 H 0 0 0 0 0
|
| 117 |
+
43.1739 10.0634 -21.3948 H 0 0 0 0 0
|
| 118 |
+
43.5855 11.7255 -21.8807 H 0 0 0 0 0
|
| 119 |
+
41.6934 11.6080 -23.5908 H 0 0 0 0 0
|
| 120 |
+
41.5069 9.8873 -23.1848 H 0 0 0 0 0
|
| 121 |
+
43.8724 9.4743 -23.8229 H 0 0 0 0 0
|
| 122 |
+
44.0639 11.2035 -24.2260 H 0 0 0 0 0
|
| 123 |
+
43.6049 9.8767 -26.1794 H 0 0 0 0 0
|
| 124 |
+
42.1764 9.3282 -25.5196 H 0 0 0 0 0
|
| 125 |
+
42.3550 10.9417 -25.8958 H 0 0 0 0 0
|
| 126 |
+
45.3074 13.1963 -19.8539 H 0 0 0 0 0
|
| 127 |
+
44.7422 11.5243 -19.7749 H 0 0 0 0 0
|
| 128 |
+
33.6657 15.8008 -16.0243 H 0 0 0 0 0
|
| 129 |
+
33.4723 14.0293 -15.8146 H 0 0 0 0 0
|
| 130 |
+
35.5021 14.4389 -14.0657 H 0 0 0 0 0
|
| 131 |
+
35.8285 15.7982 -15.2060 H 0 0 0 0 0
|
| 132 |
+
35.3063 13.1025 -16.4269 H 0 0 0 0 0
|
| 133 |
+
36.8738 13.3118 -15.5591 H 0 0 0 0 0
|
| 134 |
+
35.8513 15.1951 -17.6797 H 0 0 0 0 0
|
| 135 |
+
36.9791 13.7628 -17.9943 H 0 0 0 0 0
|
| 136 |
+
2 1 1 0 0 0
|
| 137 |
+
2 5 1 0 0 0
|
| 138 |
+
3 2 1 0 0 0
|
| 139 |
+
3 4 2 0 0 0
|
| 140 |
+
5 6 1 0 0 0
|
| 141 |
+
6 7 4 0 0 0
|
| 142 |
+
6 8 4 0 0 0
|
| 143 |
+
8 10 4 0 0 0
|
| 144 |
+
10 9 4 0 0 0
|
| 145 |
+
7 9 4 0 0 0
|
| 146 |
+
13 12 1 0 0 0
|
| 147 |
+
12 15 1 0 0 0
|
| 148 |
+
12 11 1 0 0 0
|
| 149 |
+
11 17 1 0 0 0
|
| 150 |
+
17 16 1 0 0 0
|
| 151 |
+
15 16 1 0 0 0
|
| 152 |
+
13 14 2 0 0 0
|
| 153 |
+
11 3 1 0 0 0
|
| 154 |
+
19 18 1 0 0 0
|
| 155 |
+
19 22 1 0 0 0
|
| 156 |
+
20 19 1 0 0 0
|
| 157 |
+
20 21 2 0 0 0
|
| 158 |
+
22 23 1 0 0 0
|
| 159 |
+
23 24 1 0 0 0
|
| 160 |
+
24 26 1 0 0 0
|
| 161 |
+
24 25 2 0 0 0
|
| 162 |
+
18 13 1 0 0 0
|
| 163 |
+
28 27 1 0 0 0
|
| 164 |
+
29 28 1 0 0 0
|
| 165 |
+
29 30 2 0 0 0
|
| 166 |
+
27 20 1 0 0 0
|
| 167 |
+
33 32 1 0 0 0
|
| 168 |
+
32 35 1 0 0 0
|
| 169 |
+
32 31 1 0 0 0
|
| 170 |
+
31 37 1 0 0 0
|
| 171 |
+
37 36 1 0 0 0
|
| 172 |
+
35 36 1 0 0 0
|
| 173 |
+
33 34 2 0 0 0
|
| 174 |
+
31 29 1 0 0 0
|
| 175 |
+
40 39 1 0 0 0
|
| 176 |
+
39 42 1 0 0 0
|
| 177 |
+
39 38 1 0 0 0
|
| 178 |
+
38 44 1 0 0 0
|
| 179 |
+
44 43 1 0 0 0
|
| 180 |
+
42 43 1 0 0 0
|
| 181 |
+
40 41 2 0 0 0
|
| 182 |
+
38 33 1 0 0 0
|
| 183 |
+
46 45 1 0 0 0
|
| 184 |
+
46 49 1 0 0 0
|
| 185 |
+
47 46 1 0 0 0
|
| 186 |
+
47 48 2 0 0 0
|
| 187 |
+
49 50 1 0 0 0
|
| 188 |
+
45 40 1 0 0 0
|
| 189 |
+
51 52 1 0 0 0
|
| 190 |
+
52 55 1 0 0 0
|
| 191 |
+
52 53 1 0 0 0
|
| 192 |
+
53 54 2 0 0 0
|
| 193 |
+
55 56 1 0 0 0
|
| 194 |
+
56 57 1 0 0 0
|
| 195 |
+
57 58 1 0 0 0
|
| 196 |
+
58 59 1 0 0 0
|
| 197 |
+
47 51 1 0 0 0
|
| 198 |
+
1 61 1 0 0 0
|
| 199 |
+
53 60 1 0 0 0
|
| 200 |
+
61 62 2 0 0 0
|
| 201 |
+
61 63 1 0 0 0
|
| 202 |
+
63 64 1 0 0 0
|
| 203 |
+
64 65 1 0 0 0
|
| 204 |
+
65 66 1 0 0 0
|
| 205 |
+
66 50 1 0 0 0
|
| 206 |
+
1 67 1 0 0 0
|
| 207 |
+
2 68 1 0 0 0
|
| 208 |
+
5 69 1 0 0 0
|
| 209 |
+
5 70 1 0 0 0
|
| 210 |
+
8 71 1 0 0 0
|
| 211 |
+
9 72 1 0 0 0
|
| 212 |
+
12 73 1 0 0 0
|
| 213 |
+
15 74 1 0 0 0
|
| 214 |
+
15 75 1 0 0 0
|
| 215 |
+
16 76 1 0 0 0
|
| 216 |
+
16 77 1 0 0 0
|
| 217 |
+
17 78 1 0 0 0
|
| 218 |
+
17 79 1 0 0 0
|
| 219 |
+
18 80 1 0 0 0
|
| 220 |
+
19 81 1 0 0 0
|
| 221 |
+
22 82 1 0 0 0
|
| 222 |
+
22 83 1 0 0 0
|
| 223 |
+
23 84 1 0 0 0
|
| 224 |
+
23 85 1 0 0 0
|
| 225 |
+
26 86 1 0 0 0
|
| 226 |
+
26 87 1 0 0 0
|
| 227 |
+
27 88 1 0 0 0
|
| 228 |
+
28 89 1 0 0 0
|
| 229 |
+
28 90 1 0 0 0
|
| 230 |
+
32 91 1 0 0 0
|
| 231 |
+
35 92 1 0 0 0
|
| 232 |
+
35 93 1 0 0 0
|
| 233 |
+
36 94 1 0 0 0
|
| 234 |
+
36 95 1 0 0 0
|
| 235 |
+
37 96 1 0 0 0
|
| 236 |
+
37 97 1 0 0 0
|
| 237 |
+
39 98 1 0 0 0
|
| 238 |
+
42 99 1 0 0 0
|
| 239 |
+
42100 1 0 0 0
|
| 240 |
+
43101 1 0 0 0
|
| 241 |
+
43102 1 0 0 0
|
| 242 |
+
44103 1 0 0 0
|
| 243 |
+
44104 1 0 0 0
|
| 244 |
+
45105 1 0 0 0
|
| 245 |
+
46106 1 0 0 0
|
| 246 |
+
49107 1 0 0 0
|
| 247 |
+
49108 1 0 0 0
|
| 248 |
+
51109 1 0 0 0
|
| 249 |
+
52110 1 0 0 0
|
| 250 |
+
55111 1 0 0 0
|
| 251 |
+
55112 1 0 0 0
|
| 252 |
+
56113 1 0 0 0
|
| 253 |
+
56114 1 0 0 0
|
| 254 |
+
57115 1 0 0 0
|
| 255 |
+
57116 1 0 0 0
|
| 256 |
+
58117 1 0 0 0
|
| 257 |
+
58118 1 0 0 0
|
| 258 |
+
59119 1 0 0 0
|
| 259 |
+
59120 1 0 0 0
|
| 260 |
+
59121 1 0 0 0
|
| 261 |
+
60122 1 0 0 0
|
| 262 |
+
60123 1 0 0 0
|
| 263 |
+
63124 1 0 0 0
|
| 264 |
+
63125 1 0 0 0
|
| 265 |
+
64126 1 0 0 0
|
| 266 |
+
64127 1 0 0 0
|
| 267 |
+
65128 1 0 0 0
|
| 268 |
+
65129 1 0 0 0
|
| 269 |
+
66130 1 0 0 0
|
| 270 |
+
66131 1 0 0 0
|
| 271 |
+
M END
|
| 272 |
+
$$$$
|
1vwl/1vwl_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1vwl/1vwl_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2c9d/2c9d_ligand.mol2
ADDED
|
@@ -0,0 +1,131 @@
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:55 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2c9d_ligand
|
| 7 |
+
57 58 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 O2P -17.8040 7.7130 -34.2270 O.co2 1 PHR -0.5537
|
| 14 |
+
2 P -16.5950 7.3460 -33.3970 P.3 1 PHR 0.2007
|
| 15 |
+
3 O3P -16.6030 5.9250 -32.8880 O.co2 1 PHR -0.5537
|
| 16 |
+
4 O1P -15.2780 7.7820 -33.9920 O.co2 1 PHR -0.5537
|
| 17 |
+
5 O27 -16.7040 8.2750 -32.0860 O.3 1 PHR -0.2761
|
| 18 |
+
6 C20 -16.6050 7.7380 -30.7720 C.3 1 PHR 0.0784
|
| 19 |
+
7 C19 -18.0110 7.3970 -30.2900 C.3 1 PHR -0.0250
|
| 20 |
+
8 C18 -17.9820 6.6310 -28.9710 C.3 1 PHR -0.0506
|
| 21 |
+
9 C17 -17.6860 7.5540 -27.7950 C.3 1 PHR -0.0508
|
| 22 |
+
10 C16 -18.9340 8.3030 -27.3520 C.3 1 PHR -0.0293
|
| 23 |
+
11 C15 -18.7160 9.8100 -27.4410 C.3 1 PHR 0.0435
|
| 24 |
+
12 N5 -18.1800 10.3420 -26.1830 N.am 1 PHR -0.2348
|
| 25 |
+
13 C9 -18.7700 10.4850 -24.9850 C.2 1 PHR 0.1488
|
| 26 |
+
14 C4 -20.1400 10.1510 -24.5260 C.2 1 PHR 0.2001
|
| 27 |
+
15 O2 -20.9920 9.6490 -25.2890 O.2 1 PHR -0.4201
|
| 28 |
+
16 N3 -20.4320 10.4240 -23.2320 N.am 1 PHR -0.1906
|
| 29 |
+
17 C6 -16.9500 10.8250 -25.9620 C.2 1 PHR 0.2994
|
| 30 |
+
18 O4 -16.0740 10.8510 -26.9040 O.2 1 PHR -0.4081
|
| 31 |
+
19 N7 -16.6730 11.2720 -24.7190 N.am 1 PHR -0.1806
|
| 32 |
+
20 C8 -17.8150 11.0820 -24.0260 C.2 1 PHR 0.1990
|
| 33 |
+
21 N1 -18.2530 11.2940 -22.7530 N.am 1 PHR -0.1945
|
| 34 |
+
22 C2 -19.5250 10.9740 -22.3730 C.2 1 PHR 0.3156
|
| 35 |
+
23 O1 -19.8800 11.1930 -21.1900 O.2 1 PHR -0.3876
|
| 36 |
+
24 C10 -15.3930 11.8450 -24.2750 C.3 1 PHR 0.0889
|
| 37 |
+
25 C11 -15.1070 11.6570 -22.7840 C.3 1 PHR 0.1096
|
| 38 |
+
26 O19 -15.0440 10.2590 -22.4870 O.3 1 PHR -0.3865
|
| 39 |
+
27 C12 -13.8280 12.3570 -22.3000 C.3 1 PHR 0.1114
|
| 40 |
+
28 O21 -14.1900 13.6620 -21.8330 O.3 1 PHR -0.3865
|
| 41 |
+
29 C13 -12.7120 12.4730 -23.3510 C.3 1 PHR 0.1065
|
| 42 |
+
30 O23 -12.2590 11.1660 -23.7270 O.3 1 PHR -0.3869
|
| 43 |
+
31 C14 -11.5200 13.2920 -22.8540 C.3 1 PHR 0.0727
|
| 44 |
+
32 O26 -10.7880 12.5770 -21.8440 O.3 1 PHR -0.3924
|
| 45 |
+
33 H1 -16.1506 8.4804 -30.0995 H 1 PHR 0.0612
|
| 46 |
+
34 H2 -15.9857 6.8290 -30.7868 H 1 PHR 0.0612
|
| 47 |
+
35 H3 -18.5091 6.7785 -31.0511 H 1 PHR 0.0291
|
| 48 |
+
36 H4 -18.5760 8.3301 -30.1485 H 1 PHR 0.0291
|
| 49 |
+
37 H5 -17.2013 5.8579 -29.0238 H 1 PHR 0.0266
|
| 50 |
+
38 H6 -18.9605 6.1538 -28.8132 H 1 PHR 0.0266
|
| 51 |
+
39 H7 -16.9187 8.2826 -28.0957 H 1 PHR 0.0266
|
| 52 |
+
40 H8 -17.3112 6.9530 -26.9534 H 1 PHR 0.0266
|
| 53 |
+
41 H9 -19.1678 8.0325 -26.3117 H 1 PHR 0.0288
|
| 54 |
+
42 H10 -19.7750 8.0205 -28.0022 H 1 PHR 0.0288
|
| 55 |
+
43 H11 -19.6769 10.2997 -27.6575 H 1 PHR 0.0564
|
| 56 |
+
44 H12 -18.0048 10.0227 -28.2528 H 1 PHR 0.0564
|
| 57 |
+
45 H13 -21.3488 10.2142 -22.8923 H 1 PHR 0.2244
|
| 58 |
+
46 H14 -17.6285 11.6931 -22.0817 H 1 PHR 0.2306
|
| 59 |
+
47 H15 -15.4041 12.9235 -24.4910 H 1 PHR 0.0624
|
| 60 |
+
48 H16 -14.5837 11.3651 -24.8449 H 1 PHR 0.0624
|
| 61 |
+
49 H17 -15.9504 12.0913 -22.2272 H 1 PHR 0.0646
|
| 62 |
+
50 H18 -14.3497 9.8589 -22.9974 H 1 PHR 0.2100
|
| 63 |
+
51 H19 -13.4265 11.7766 -21.4563 H 1 PHR 0.0647
|
| 64 |
+
52 H20 -13.4127 14.1148 -21.5278 H 1 PHR 0.2100
|
| 65 |
+
53 H21 -13.1281 12.9731 -24.2380 H 1 PHR 0.0643
|
| 66 |
+
54 H22 -11.9233 10.7159 -22.9608 H 1 PHR 0.2100
|
| 67 |
+
55 H23 -11.8859 14.2389 -22.4303 H 1 PHR 0.0584
|
| 68 |
+
56 H24 -10.8508 13.5036 -23.7010 H 1 PHR 0.0584
|
| 69 |
+
57 H25 -10.4666 11.7597 -22.2063 H 1 PHR 0.2095
|
| 70 |
+
@<TRIPOS>BOND
|
| 71 |
+
1 1 2 ar
|
| 72 |
+
2 2 3 ar
|
| 73 |
+
3 2 4 ar
|
| 74 |
+
4 2 5 1
|
| 75 |
+
5 5 6 1
|
| 76 |
+
6 6 7 1
|
| 77 |
+
7 7 8 1
|
| 78 |
+
8 8 9 1
|
| 79 |
+
9 9 10 1
|
| 80 |
+
10 10 11 1
|
| 81 |
+
11 11 12 1
|
| 82 |
+
12 12 13 am
|
| 83 |
+
13 12 17 am
|
| 84 |
+
14 13 14 1
|
| 85 |
+
15 13 20 2
|
| 86 |
+
16 14 15 2
|
| 87 |
+
17 14 16 am
|
| 88 |
+
18 16 22 am
|
| 89 |
+
19 17 18 2
|
| 90 |
+
20 17 19 am
|
| 91 |
+
21 19 20 am
|
| 92 |
+
22 19 24 1
|
| 93 |
+
23 20 21 1
|
| 94 |
+
24 21 22 am
|
| 95 |
+
25 22 23 2
|
| 96 |
+
26 24 25 1
|
| 97 |
+
27 25 26 1
|
| 98 |
+
28 25 27 1
|
| 99 |
+
29 27 28 1
|
| 100 |
+
30 27 29 1
|
| 101 |
+
31 29 30 1
|
| 102 |
+
32 29 31 1
|
| 103 |
+
33 31 32 1
|
| 104 |
+
34 6 33 1
|
| 105 |
+
35 6 34 1
|
| 106 |
+
36 7 35 1
|
| 107 |
+
37 7 36 1
|
| 108 |
+
38 8 37 1
|
| 109 |
+
39 8 38 1
|
| 110 |
+
40 9 39 1
|
| 111 |
+
41 9 40 1
|
| 112 |
+
42 10 41 1
|
| 113 |
+
43 10 42 1
|
| 114 |
+
44 11 43 1
|
| 115 |
+
45 11 44 1
|
| 116 |
+
46 16 45 1
|
| 117 |
+
47 21 46 1
|
| 118 |
+
48 24 47 1
|
| 119 |
+
49 24 48 1
|
| 120 |
+
50 25 49 1
|
| 121 |
+
51 26 50 1
|
| 122 |
+
52 27 51 1
|
| 123 |
+
53 28 52 1
|
| 124 |
+
54 29 53 1
|
| 125 |
+
55 30 54 1
|
| 126 |
+
56 31 55 1
|
| 127 |
+
57 31 56 1
|
| 128 |
+
58 32 57 1
|
| 129 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 130 |
+
1 PHR 1
|
| 131 |
+
|
2c9d/2c9d_ligand.sdf
ADDED
|
@@ -0,0 +1,125 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2c9d_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
59 60 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
-17.8040 7.7130 -34.2270 O 0 0 0 0 0
|
| 6 |
+
-16.5950 7.3460 -33.3970 P 0 0 0 0 0
|
| 7 |
+
-16.6030 5.9250 -32.8880 O 0 0 0 0 0
|
| 8 |
+
-15.2780 7.7820 -33.9920 O 0 0 0 0 0
|
| 9 |
+
-16.7040 8.2750 -32.0860 O 0 0 0 0 0
|
| 10 |
+
-16.6050 7.7380 -30.7720 C 0 0 0 0 0
|
| 11 |
+
-18.0110 7.3970 -30.2900 C 0 0 0 0 0
|
| 12 |
+
-17.9820 6.6310 -28.9710 C 0 0 0 0 0
|
| 13 |
+
-17.6860 7.5540 -27.7950 C 0 0 0 0 0
|
| 14 |
+
-18.9340 8.3030 -27.3520 C 0 0 0 0 0
|
| 15 |
+
-18.7160 9.8100 -27.4410 C 0 0 0 0 0
|
| 16 |
+
-18.1800 10.3420 -26.1830 N 0 0 0 0 0
|
| 17 |
+
-18.7700 10.4850 -24.9850 C 0 0 0 0 0
|
| 18 |
+
-20.1400 10.1510 -24.5260 C 0 0 0 0 0
|
| 19 |
+
-20.9920 9.6490 -25.2890 O 0 0 0 0 0
|
| 20 |
+
-20.4320 10.4240 -23.2320 N 0 0 0 0 0
|
| 21 |
+
-16.9500 10.8250 -25.9620 C 0 0 0 0 0
|
| 22 |
+
-16.0740 10.8510 -26.9040 O 0 0 0 0 0
|
| 23 |
+
-16.6730 11.2720 -24.7190 N 0 0 0 0 0
|
| 24 |
+
-17.8150 11.0820 -24.0260 C 0 0 0 0 0
|
| 25 |
+
-18.2530 11.2940 -22.7530 N 0 0 0 0 0
|
| 26 |
+
-19.5250 10.9740 -22.3730 C 0 0 0 0 0
|
| 27 |
+
-19.8800 11.1930 -21.1900 O 0 0 0 0 0
|
| 28 |
+
-15.3930 11.8450 -24.2750 C 0 0 0 0 0
|
| 29 |
+
-15.1070 11.6570 -22.7840 C 0 0 0 0 0
|
| 30 |
+
-15.0440 10.2590 -22.4870 O 0 0 0 0 0
|
| 31 |
+
-13.8280 12.3570 -22.3000 C 0 0 0 0 0
|
| 32 |
+
-14.1900 13.6620 -21.8330 O 0 0 0 0 0
|
| 33 |
+
-12.7120 12.4730 -23.3510 C 0 0 0 0 0
|
| 34 |
+
-12.2590 11.1660 -23.7270 O 0 0 0 0 0
|
| 35 |
+
-11.5200 13.2920 -22.8540 C 0 0 0 0 0
|
| 36 |
+
-10.7880 12.5770 -21.8440 O 0 0 0 0 0
|
| 37 |
+
-17.7288 8.6261 -34.5136 H 0 0 0 0 0
|
| 38 |
+
-15.3491 8.6911 -34.2922 H 0 0 0 0 0
|
| 39 |
+
-16.1456 8.4658 -30.1032 H 0 0 0 0 0
|
| 40 |
+
-15.9835 6.8425 -30.7788 H 0 0 0 0 0
|
| 41 |
+
-18.4903 6.7701 -31.0419 H 0 0 0 0 0
|
| 42 |
+
-18.5574 8.3275 -30.1360 H 0 0 0 0 0
|
| 43 |
+
-17.1950 5.8788 -29.0260 H 0 0 0 0 0
|
| 44 |
+
-18.9600 6.1757 -28.8147 H 0 0 0 0 0
|
| 45 |
+
-16.9365 8.2819 -28.1055 H 0 0 0 0 0
|
| 46 |
+
-17.3297 6.9496 -26.9608 H 0 0 0 0 0
|
| 47 |
+
-19.1560 8.0388 -26.3181 H 0 0 0 0 0
|
| 48 |
+
-19.7619 8.0269 -28.0050 H 0 0 0 0 0
|
| 49 |
+
-19.6740 10.2895 -27.6422 H 0 0 0 0 0
|
| 50 |
+
-18.0004 10.0122 -28.2380 H 0 0 0 0 0
|
| 51 |
+
-21.3672 10.2100 -22.8855 H 0 0 0 0 0
|
| 52 |
+
-17.6160 11.7011 -22.0682 H 0 0 0 0 0
|
| 53 |
+
-15.4385 12.9180 -24.4615 H 0 0 0 0 0
|
| 54 |
+
-14.6028 11.3306 -24.8219 H 0 0 0 0 0
|
| 55 |
+
-15.9277 12.1315 -22.2461 H 0 0 0 0 0
|
| 56 |
+
-14.8646 10.1395 -21.5515 H 0 0 0 0 0
|
| 57 |
+
-13.4065 11.7344 -21.5109 H 0 0 0 0 0
|
| 58 |
+
-13.4044 14.1196 -21.5246 H 0 0 0 0 0
|
| 59 |
+
-13.1372 12.9927 -24.2097 H 0 0 0 0 0
|
| 60 |
+
-11.5627 11.2463 -24.3830 H 0 0 0 0 0
|
| 61 |
+
-11.8904 14.2227 -22.4242 H 0 0 0 0 0
|
| 62 |
+
-10.8550 13.4871 -23.6953 H 0 0 0 0 0
|
| 63 |
+
-10.0467 13.1111 -21.5492 H 0 0 0 0 0
|
| 64 |
+
1 2 1 0 0 0
|
| 65 |
+
2 3 2 0 0 0
|
| 66 |
+
2 4 1 0 0 0
|
| 67 |
+
2 5 1 0 0 0
|
| 68 |
+
5 6 1 0 0 0
|
| 69 |
+
6 7 1 0 0 0
|
| 70 |
+
7 8 1 0 0 0
|
| 71 |
+
8 9 1 0 0 0
|
| 72 |
+
9 10 1 0 0 0
|
| 73 |
+
10 11 1 0 0 0
|
| 74 |
+
11 12 1 0 0 0
|
| 75 |
+
12 13 1 0 0 0
|
| 76 |
+
12 17 1 0 0 0
|
| 77 |
+
13 14 1 0 0 0
|
| 78 |
+
13 20 2 0 0 0
|
| 79 |
+
14 15 2 0 0 0
|
| 80 |
+
14 16 1 0 0 0
|
| 81 |
+
16 22 1 0 0 0
|
| 82 |
+
17 18 2 0 0 0
|
| 83 |
+
17 19 1 0 0 0
|
| 84 |
+
19 20 1 0 0 0
|
| 85 |
+
19 24 1 0 0 0
|
| 86 |
+
20 21 1 0 0 0
|
| 87 |
+
21 22 1 0 0 0
|
| 88 |
+
22 23 2 0 0 0
|
| 89 |
+
24 25 1 0 0 0
|
| 90 |
+
25 26 1 0 0 0
|
| 91 |
+
25 27 1 0 0 0
|
| 92 |
+
27 28 1 0 0 0
|
| 93 |
+
27 29 1 0 0 0
|
| 94 |
+
29 30 1 0 0 0
|
| 95 |
+
29 31 1 0 0 0
|
| 96 |
+
31 32 1 0 0 0
|
| 97 |
+
1 33 1 0 0 0
|
| 98 |
+
4 34 1 0 0 0
|
| 99 |
+
6 35 1 0 0 0
|
| 100 |
+
6 36 1 0 0 0
|
| 101 |
+
7 37 1 0 0 0
|
| 102 |
+
7 38 1 0 0 0
|
| 103 |
+
8 39 1 0 0 0
|
| 104 |
+
8 40 1 0 0 0
|
| 105 |
+
9 41 1 0 0 0
|
| 106 |
+
9 42 1 0 0 0
|
| 107 |
+
10 43 1 0 0 0
|
| 108 |
+
10 44 1 0 0 0
|
| 109 |
+
11 45 1 0 0 0
|
| 110 |
+
11 46 1 0 0 0
|
| 111 |
+
16 47 1 0 0 0
|
| 112 |
+
21 48 1 0 0 0
|
| 113 |
+
24 49 1 0 0 0
|
| 114 |
+
24 50 1 0 0 0
|
| 115 |
+
25 51 1 0 0 0
|
| 116 |
+
26 52 1 0 0 0
|
| 117 |
+
27 53 1 0 0 0
|
| 118 |
+
28 54 1 0 0 0
|
| 119 |
+
29 55 1 0 0 0
|
| 120 |
+
30 56 1 0 0 0
|
| 121 |
+
31 57 1 0 0 0
|
| 122 |
+
31 58 1 0 0 0
|
| 123 |
+
32 59 1 0 0 0
|
| 124 |
+
M END
|
| 125 |
+
$$$$
|
2c9d/2c9d_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2c9d/2c9d_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2e5y/2e5y_ligand.mol2
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:56 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2e5y_ligand
|
| 7 |
+
43 45 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 PG 24.3820 13.9950 9.7310 P.3 1 ATP 0.1879
|
| 14 |
+
2 O1G 23.8720 12.9180 10.6960 O.co2 1 ATP -0.6091
|
| 15 |
+
3 O2G 23.2910 14.9340 9.3410 O.co2 1 ATP -0.6091
|
| 16 |
+
4 O3G 25.1830 13.4800 8.5500 O.co2 1 ATP -0.6091
|
| 17 |
+
5 PB 26.3190 16.1500 10.1240 P.3 1 ATP 0.3553
|
| 18 |
+
6 O1B 26.1120 16.4690 8.6530 O.co2 1 ATP -0.5652
|
| 19 |
+
7 O2B 27.6910 16.1670 10.6880 O.co2 1 ATP -0.5652
|
| 20 |
+
8 O3B 25.5190 14.8130 10.5180 O.3 1 ATP -0.1546
|
| 21 |
+
9 PA 25.8500 18.7340 11.3740 P.3 1 ATP 0.3266
|
| 22 |
+
10 O1A 27.0770 18.8040 12.2340 O.co2 1 ATP -0.5692
|
| 23 |
+
11 O2A 25.8890 19.5080 10.0700 O.co2 1 ATP -0.5692
|
| 24 |
+
12 O3A 25.4790 17.2150 11.0070 O.3 1 ATP -0.1171
|
| 25 |
+
13 O5' 24.4920 19.2300 12.1040 O.3 1 ATP -0.2441
|
| 26 |
+
14 C5' 23.3000 19.5510 11.3900 C.3 1 ATP 0.1131
|
| 27 |
+
15 C4' 22.1560 19.6980 12.3910 C.3 1 ATP 0.1189
|
| 28 |
+
16 O4' 21.7830 18.3960 12.8280 O.3 1 ATP -0.3364
|
| 29 |
+
17 C3' 22.6790 20.4250 13.6090 C.3 1 ATP 0.1149
|
| 30 |
+
18 O3' 21.4900 21.0480 14.0690 O.3 1 ATP -0.3864
|
| 31 |
+
19 C2' 22.8330 19.4110 14.7060 C.3 1 ATP 0.1385
|
| 32 |
+
20 O2' 22.6920 19.8860 16.0490 O.3 1 ATP -0.3836
|
| 33 |
+
21 C1' 22.0670 18.1990 14.2330 C.3 1 ATP 0.2010
|
| 34 |
+
22 N9 22.6830 16.9140 14.4720 N.pl3 1 ATP -0.1919
|
| 35 |
+
23 C8 23.7800 16.4020 13.6830 C.2 1 ATP 0.1123
|
| 36 |
+
24 N7 24.0280 15.1110 14.2240 N.2 1 ATP -0.2958
|
| 37 |
+
25 C5 23.2260 14.9010 15.3750 C.ar 1 ATP 0.1045
|
| 38 |
+
26 C6 23.0860 13.7380 16.2970 C.ar 1 ATP 0.1298
|
| 39 |
+
27 N6 23.6640 12.5210 15.9050 N.pl3 1 ATP -0.3152
|
| 40 |
+
28 N1 22.0020 13.9280 17.2340 N.ar 1 ATP -0.2698
|
| 41 |
+
29 C2 21.1440 15.1030 17.3890 C.ar 1 ATP 0.0533
|
| 42 |
+
30 N3 21.2840 16.2200 16.4710 N.ar 1 ATP -0.2714
|
| 43 |
+
31 C4 22.3690 16.0590 15.5380 C.ar 1 ATP 0.1613
|
| 44 |
+
32 H1 23.0672 18.7464 10.6770 H 1 ATP 0.0648
|
| 45 |
+
33 H2 23.4382 20.4959 10.8442 H 1 ATP 0.0648
|
| 46 |
+
34 H3 21.3045 20.2303 11.9420 H 1 ATP 0.0651
|
| 47 |
+
35 H4 23.5504 21.0724 13.4317 H 1 ATP 0.0648
|
| 48 |
+
36 H5 21.6802 21.5518 14.8516 H 1 ATP 0.2100
|
| 49 |
+
37 H6 23.8884 19.1027 14.6731 H 1 ATP 0.0676
|
| 50 |
+
38 H7 21.8256 20.2586 16.1626 H 1 ATP 0.2101
|
| 51 |
+
39 H8 21.1110 18.1883 14.7769 H 1 ATP 0.0996
|
| 52 |
+
40 H9 24.2987 16.8933 12.8611 H 1 ATP 0.1349
|
| 53 |
+
41 H10 23.5884 11.6947 16.5153 H 1 ATP 0.1820
|
| 54 |
+
42 H11 24.1639 12.4539 15.0069 H 1 ATP 0.1820
|
| 55 |
+
43 H12 20.4082 15.1397 18.1842 H 1 ATP 0.0996
|
| 56 |
+
@<TRIPOS>BOND
|
| 57 |
+
1 1 2 ar
|
| 58 |
+
2 1 3 ar
|
| 59 |
+
3 1 4 ar
|
| 60 |
+
4 8 1 1
|
| 61 |
+
5 5 6 ar
|
| 62 |
+
6 5 7 ar
|
| 63 |
+
7 5 8 1
|
| 64 |
+
8 12 5 1
|
| 65 |
+
9 9 10 ar
|
| 66 |
+
10 9 11 ar
|
| 67 |
+
11 9 12 1
|
| 68 |
+
12 9 13 1
|
| 69 |
+
13 13 14 1
|
| 70 |
+
14 14 15 1
|
| 71 |
+
15 15 16 1
|
| 72 |
+
16 15 17 1
|
| 73 |
+
17 16 21 1
|
| 74 |
+
18 17 18 1
|
| 75 |
+
19 17 19 1
|
| 76 |
+
20 19 20 1
|
| 77 |
+
21 19 21 1
|
| 78 |
+
22 21 22 1
|
| 79 |
+
23 22 23 1
|
| 80 |
+
24 22 31 1
|
| 81 |
+
25 23 24 2
|
| 82 |
+
26 24 25 1
|
| 83 |
+
27 25 26 ar
|
| 84 |
+
28 25 31 ar
|
| 85 |
+
29 26 27 1
|
| 86 |
+
30 26 28 ar
|
| 87 |
+
31 28 29 ar
|
| 88 |
+
32 29 30 ar
|
| 89 |
+
33 30 31 ar
|
| 90 |
+
34 14 32 1
|
| 91 |
+
35 14 33 1
|
| 92 |
+
36 15 34 1
|
| 93 |
+
37 17 35 1
|
| 94 |
+
38 18 36 1
|
| 95 |
+
39 19 37 1
|
| 96 |
+
40 20 38 1
|
| 97 |
+
41 21 39 1
|
| 98 |
+
42 23 40 1
|
| 99 |
+
43 27 41 1
|
| 100 |
+
44 27 42 1
|
| 101 |
+
45 29 43 1
|
| 102 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 103 |
+
1 ATP 1
|
| 104 |
+
|
2e5y/2e5y_ligand.sdf
ADDED
|
@@ -0,0 +1,102 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2e5y_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
47 49 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
24.3820 13.9950 9.7310 P 0 0 0 0 0
|
| 6 |
+
23.8720 12.9180 10.6960 O 0 0 0 0 0
|
| 7 |
+
23.2910 14.9340 9.3410 O 0 0 0 0 0
|
| 8 |
+
25.1830 13.4800 8.5500 O 0 0 0 0 0
|
| 9 |
+
26.3190 16.1500 10.1240 P 0 0 0 0 0
|
| 10 |
+
26.1120 16.4690 8.6530 O 0 0 0 0 0
|
| 11 |
+
27.6910 16.1670 10.6880 O 0 0 0 0 0
|
| 12 |
+
25.5190 14.8130 10.5180 O 0 0 0 0 0
|
| 13 |
+
25.8500 18.7340 11.3740 P 0 0 0 0 0
|
| 14 |
+
27.0770 18.8040 12.2340 O 0 0 0 0 0
|
| 15 |
+
25.8890 19.5080 10.0700 O 0 0 0 0 0
|
| 16 |
+
25.4790 17.2150 11.0070 O 0 0 0 0 0
|
| 17 |
+
24.4920 19.2300 12.1040 O 0 0 0 0 0
|
| 18 |
+
23.3000 19.5510 11.3900 C 0 0 0 0 0
|
| 19 |
+
22.1560 19.6980 12.3910 C 0 0 0 0 0
|
| 20 |
+
21.7830 18.3960 12.8280 O 0 0 0 0 0
|
| 21 |
+
22.6790 20.4250 13.6090 C 0 0 0 0 0
|
| 22 |
+
21.4900 21.0480 14.0690 O 0 0 0 0 0
|
| 23 |
+
22.8330 19.4110 14.7060 C 0 0 0 0 0
|
| 24 |
+
22.6920 19.8860 16.0490 O 0 0 0 0 0
|
| 25 |
+
22.0670 18.1990 14.2330 C 0 0 0 0 0
|
| 26 |
+
22.6830 16.9140 14.4720 N 0 0 0 0 0
|
| 27 |
+
23.7800 16.4020 13.6830 C 0 0 0 0 0
|
| 28 |
+
24.0280 15.1110 14.2240 N 0 0 0 0 0
|
| 29 |
+
23.2260 14.9010 15.3750 C 0 0 0 0 0
|
| 30 |
+
23.0860 13.7380 16.2970 C 0 0 0 0 0
|
| 31 |
+
23.6640 12.5210 15.9050 N 0 0 0 0 0
|
| 32 |
+
22.0020 13.9280 17.2340 N 0 0 0 0 0
|
| 33 |
+
21.1440 15.1030 17.3890 C 0 0 0 0 0
|
| 34 |
+
21.2840 16.2200 16.4710 N 0 0 0 0 0
|
| 35 |
+
22.3690 16.0590 15.5380 C 0 0 0 0 0
|
| 36 |
+
24.5945 12.3302 10.9285 H 0 0 0 0 0
|
| 37 |
+
25.8665 12.8835 8.8641 H 0 0 0 0 0
|
| 38 |
+
25.1765 16.4167 8.4439 H 0 0 0 0 0
|
| 39 |
+
25.0570 19.3919 9.6053 H 0 0 0 0 0
|
| 40 |
+
23.0698 18.7588 10.6775 H 0 0 0 0 0
|
| 41 |
+
23.4356 20.4836 10.8423 H 0 0 0 0 0
|
| 42 |
+
21.3216 20.2292 11.9329 H 0 0 0 0 0
|
| 43 |
+
23.5711 21.0166 13.4036 H 0 0 0 0 0
|
| 44 |
+
21.6822 21.5571 14.8599 H 0 0 0 0 0
|
| 45 |
+
23.8698 19.1121 14.8605 H 0 0 0 0 0
|
| 46 |
+
22.8097 19.1548 16.6598 H 0 0 0 0 0
|
| 47 |
+
21.1619 18.1381 14.8373 H 0 0 0 0 0
|
| 48 |
+
24.2991 16.8937 12.8603 H 0 0 0 0 0
|
| 49 |
+
24.1590 12.4546 15.0157 H 0 0 0 0 0
|
| 50 |
+
23.5892 11.7028 16.5094 H 0 0 0 0 0
|
| 51 |
+
20.4041 15.1399 18.1886 H 0 0 0 0 0
|
| 52 |
+
1 2 1 0 0 0
|
| 53 |
+
1 3 2 0 0 0
|
| 54 |
+
1 4 1 0 0 0
|
| 55 |
+
8 1 1 0 0 0
|
| 56 |
+
5 6 1 0 0 0
|
| 57 |
+
5 7 2 0 0 0
|
| 58 |
+
5 8 1 0 0 0
|
| 59 |
+
12 5 1 0 0 0
|
| 60 |
+
9 10 2 0 0 0
|
| 61 |
+
9 11 1 0 0 0
|
| 62 |
+
9 12 1 0 0 0
|
| 63 |
+
9 13 1 0 0 0
|
| 64 |
+
13 14 1 0 0 0
|
| 65 |
+
14 15 1 0 0 0
|
| 66 |
+
15 16 1 0 0 0
|
| 67 |
+
15 17 1 0 0 0
|
| 68 |
+
16 21 1 0 0 0
|
| 69 |
+
17 18 1 0 0 0
|
| 70 |
+
17 19 1 0 0 0
|
| 71 |
+
19 20 1 0 0 0
|
| 72 |
+
19 21 1 0 0 0
|
| 73 |
+
21 22 1 0 0 0
|
| 74 |
+
22 23 4 0 0 0
|
| 75 |
+
22 31 4 0 0 0
|
| 76 |
+
23 24 4 0 0 0
|
| 77 |
+
24 25 4 0 0 0
|
| 78 |
+
25 26 4 0 0 0
|
| 79 |
+
25 31 4 0 0 0
|
| 80 |
+
26 27 1 0 0 0
|
| 81 |
+
26 28 4 0 0 0
|
| 82 |
+
28 29 4 0 0 0
|
| 83 |
+
29 30 4 0 0 0
|
| 84 |
+
30 31 4 0 0 0
|
| 85 |
+
2 32 1 0 0 0
|
| 86 |
+
4 33 1 0 0 0
|
| 87 |
+
6 34 1 0 0 0
|
| 88 |
+
11 35 1 0 0 0
|
| 89 |
+
14 36 1 0 0 0
|
| 90 |
+
14 37 1 0 0 0
|
| 91 |
+
15 38 1 0 0 0
|
| 92 |
+
17 39 1 0 0 0
|
| 93 |
+
18 40 1 0 0 0
|
| 94 |
+
19 41 1 0 0 0
|
| 95 |
+
20 42 1 0 0 0
|
| 96 |
+
21 43 1 0 0 0
|
| 97 |
+
23 44 1 0 0 0
|
| 98 |
+
27 45 1 0 0 0
|
| 99 |
+
27 46 1 0 0 0
|
| 100 |
+
29 47 1 0 0 0
|
| 101 |
+
M END
|
| 102 |
+
$$$$
|
2e5y/2e5y_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2e5y/2e5y_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2f6t/2f6t_ligand.mol2
ADDED
|
@@ -0,0 +1,113 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:52 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2f6t_ligand
|
| 7 |
+
48 49 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 O6 -10.2890 46.9830 46.3080 O.co2 1 1C2 -0.4632
|
| 14 |
+
2 S1 -9.1500 47.6340 46.9710 S.o2 1 1C2 -0.0961
|
| 15 |
+
3 O4 -8.0610 46.6760 47.1530 O.co2 1 1C2 -0.4632
|
| 16 |
+
4 O5 -8.7600 48.9290 46.3640 O.co2 1 1C2 -0.4632
|
| 17 |
+
5 N3 -9.6980 48.0460 48.4440 N.am 1 1C2 -0.2261
|
| 18 |
+
6 C15 -10.2950 47.1330 49.2730 C.ar 1 1C2 0.0460
|
| 19 |
+
7 C16 -9.5240 46.3910 50.1720 C.ar 1 1C2 -0.0587
|
| 20 |
+
8 C14 -11.6840 46.9590 49.2730 C.ar 1 1C2 -0.0487
|
| 21 |
+
9 C13 -12.3190 46.0530 50.1310 C.ar 1 1C2 -0.0336
|
| 22 |
+
10 C12 -13.8250 45.8760 50.1120 C.3 1 1C2 0.0665
|
| 23 |
+
11 N2 -14.3710 45.3040 51.3590 N.am 1 1C2 -0.2160
|
| 24 |
+
12 C7 -15.6750 45.0640 51.4650 C.2 1 1C2 0.3269
|
| 25 |
+
13 O3 -16.2550 44.5920 52.4330 O.2 1 1C2 -0.3772
|
| 26 |
+
14 O2 -16.3980 45.4300 50.2750 O.3 1 1C2 -0.2578
|
| 27 |
+
15 C8 -17.8140 45.4510 50.0410 C.3 1 1C2 0.0905
|
| 28 |
+
16 C11 -18.0090 45.6610 48.5410 C.3 1 1C2 -0.0320
|
| 29 |
+
17 C10 -18.4640 46.5780 50.8350 C.3 1 1C2 -0.0320
|
| 30 |
+
18 C9 -18.3630 44.0820 50.4060 C.3 1 1C2 -0.0320
|
| 31 |
+
19 C4 -13.4950 44.9840 52.4800 C.3 1 1C2 0.1436
|
| 32 |
+
20 C5 -13.2760 46.1750 53.3680 C.2 1 1C2 0.2033
|
| 33 |
+
21 O1 -12.4680 46.1370 54.2770 O.2 1 1C2 -0.3944
|
| 34 |
+
22 N1 -13.9980 47.2640 53.1280 N.am 1 1C2 -0.2880
|
| 35 |
+
23 C6 -13.8350 48.4550 53.9550 C.3 1 1C2 0.0196
|
| 36 |
+
24 C3 -12.2180 44.3430 51.9280 C.3 1 1C2 0.0117
|
| 37 |
+
25 C2 -11.5380 45.3190 50.9990 C.ar 1 1C2 -0.0511
|
| 38 |
+
26 C1 -10.1510 45.4740 51.0300 C.ar 1 1C2 -0.0816
|
| 39 |
+
27 H1 -9.5968 48.9914 48.7539 H 1 1C2 0.2102
|
| 40 |
+
28 H2 -8.4486 46.5228 50.2065 H 1 1C2 0.0410
|
| 41 |
+
29 H3 -12.2866 47.5438 48.5875 H 1 1C2 0.0402
|
| 42 |
+
30 H4 -14.0855 45.2060 49.2794 H 1 1C2 0.0670
|
| 43 |
+
31 H5 -14.2884 46.8603 49.9494 H 1 1C2 0.0670
|
| 44 |
+
32 H6 -19.0844 45.6844 48.3108 H 1 1C2 0.0260
|
| 45 |
+
33 H7 -17.5340 44.8356 47.9904 H 1 1C2 0.0260
|
| 46 |
+
34 H8 -17.5491 46.6143 48.2413 H 1 1C2 0.0260
|
| 47 |
+
35 H9 -19.5477 46.5819 50.6461 H 1 1C2 0.0260
|
| 48 |
+
36 H10 -18.0341 47.5414 50.5235 H 1 1C2 0.0260
|
| 49 |
+
37 H11 -18.2795 46.4241 51.9084 H 1 1C2 0.0260
|
| 50 |
+
38 H12 -19.4498 44.0659 50.2371 H 1 1C2 0.0260
|
| 51 |
+
39 H13 -18.1535 43.8735 51.4655 H 1 1C2 0.0260
|
| 52 |
+
40 H14 -17.8832 43.3156 49.7796 H 1 1C2 0.0260
|
| 53 |
+
41 H15 -13.9992 44.2240 53.0950 H 1 1C2 0.0821
|
| 54 |
+
42 H16 -14.6572 47.2675 52.3760 H 1 1C2 0.1848
|
| 55 |
+
43 H17 -14.5155 49.2433 53.6007 H 1 1C2 0.0484
|
| 56 |
+
44 H18 -12.7960 48.8096 53.8865 H 1 1C2 0.0484
|
| 57 |
+
45 H19 -14.0707 48.2101 55.0011 H 1 1C2 0.0484
|
| 58 |
+
46 H20 -12.4745 43.4267 51.3761 H 1 1C2 0.0428
|
| 59 |
+
47 H21 -11.5420 44.0934 52.7591 H 1 1C2 0.0428
|
| 60 |
+
48 H22 -9.5565 44.8845 51.7186 H 1 1C2 0.0497
|
| 61 |
+
@<TRIPOS>BOND
|
| 62 |
+
1 1 2 ar
|
| 63 |
+
2 2 3 ar
|
| 64 |
+
3 2 4 ar
|
| 65 |
+
4 2 5 am
|
| 66 |
+
5 5 6 1
|
| 67 |
+
6 6 7 ar
|
| 68 |
+
7 6 8 ar
|
| 69 |
+
8 7 26 ar
|
| 70 |
+
9 8 9 ar
|
| 71 |
+
10 9 10 1
|
| 72 |
+
11 9 25 ar
|
| 73 |
+
12 10 11 1
|
| 74 |
+
13 11 12 am
|
| 75 |
+
14 11 19 1
|
| 76 |
+
15 12 13 2
|
| 77 |
+
16 12 14 1
|
| 78 |
+
17 14 15 1
|
| 79 |
+
18 15 16 1
|
| 80 |
+
19 15 17 1
|
| 81 |
+
20 15 18 1
|
| 82 |
+
21 19 20 1
|
| 83 |
+
22 19 24 1
|
| 84 |
+
23 20 21 2
|
| 85 |
+
24 20 22 am
|
| 86 |
+
25 22 23 1
|
| 87 |
+
26 24 25 1
|
| 88 |
+
27 25 26 ar
|
| 89 |
+
28 5 27 1
|
| 90 |
+
29 7 28 1
|
| 91 |
+
30 8 29 1
|
| 92 |
+
31 10 30 1
|
| 93 |
+
32 10 31 1
|
| 94 |
+
33 16 32 1
|
| 95 |
+
34 16 33 1
|
| 96 |
+
35 16 34 1
|
| 97 |
+
36 17 35 1
|
| 98 |
+
37 17 36 1
|
| 99 |
+
38 17 37 1
|
| 100 |
+
39 18 38 1
|
| 101 |
+
40 18 39 1
|
| 102 |
+
41 18 40 1
|
| 103 |
+
42 19 41 1
|
| 104 |
+
43 22 42 1
|
| 105 |
+
44 23 43 1
|
| 106 |
+
45 23 44 1
|
| 107 |
+
46 23 45 1
|
| 108 |
+
47 24 46 1
|
| 109 |
+
48 24 47 1
|
| 110 |
+
49 26 48 1
|
| 111 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 112 |
+
1 1C2 1
|
| 113 |
+
|
2f6t/2f6t_ligand.sdf
ADDED
|
@@ -0,0 +1,105 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2f6t_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
49 50 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
-10.2890 46.9830 46.3080 O 0 0 0 0 0
|
| 6 |
+
-9.1500 47.6340 46.9710 S 0 0 0 0 0
|
| 7 |
+
-8.0610 46.6760 47.1530 O 0 0 0 0 0
|
| 8 |
+
-8.7600 48.9290 46.3640 O 0 0 0 0 0
|
| 9 |
+
-9.6980 48.0460 48.4440 N 0 0 0 0 0
|
| 10 |
+
-10.2950 47.1330 49.2730 C 0 0 0 0 0
|
| 11 |
+
-9.5240 46.3910 50.1720 C 0 0 0 0 0
|
| 12 |
+
-11.6840 46.9590 49.2730 C 0 0 0 0 0
|
| 13 |
+
-12.3190 46.0530 50.1310 C 0 0 0 0 0
|
| 14 |
+
-13.8250 45.8760 50.1120 C 0 0 0 0 0
|
| 15 |
+
-14.3710 45.3040 51.3590 N 0 0 0 0 0
|
| 16 |
+
-15.6750 45.0640 51.4650 C 0 0 0 0 0
|
| 17 |
+
-16.2550 44.5920 52.4330 O 0 0 0 0 0
|
| 18 |
+
-16.3980 45.4300 50.2750 O 0 0 0 0 0
|
| 19 |
+
-17.8140 45.4510 50.0410 C 0 0 0 0 0
|
| 20 |
+
-18.0090 45.6610 48.5410 C 0 0 0 0 0
|
| 21 |
+
-18.4640 46.5780 50.8350 C 0 0 0 0 0
|
| 22 |
+
-18.3630 44.0820 50.4060 C 0 0 0 0 0
|
| 23 |
+
-13.4950 44.9840 52.4800 C 0 0 0 0 0
|
| 24 |
+
-13.2760 46.1750 53.3680 C 0 0 0 0 0
|
| 25 |
+
-12.4680 46.1370 54.2770 O 0 0 0 0 0
|
| 26 |
+
-13.9980 47.2640 53.1280 N 0 0 0 0 0
|
| 27 |
+
-13.8350 48.4550 53.9550 C 0 0 0 0 0
|
| 28 |
+
-12.2180 44.3430 51.9280 C 0 0 0 0 0
|
| 29 |
+
-11.5380 45.3190 50.9990 C 0 0 0 0 0
|
| 30 |
+
-10.1510 45.4740 51.0300 C 0 0 0 0 0
|
| 31 |
+
-8.0142 49.2949 46.8451 H 0 0 0 0 0
|
| 32 |
+
-9.5948 49.0103 48.7601 H 0 0 0 0 0
|
| 33 |
+
-8.4426 46.5236 50.2066 H 0 0 0 0 0
|
| 34 |
+
-12.2899 47.5471 48.5837 H 0 0 0 0 0
|
| 35 |
+
-14.0616 45.1831 49.3045 H 0 0 0 0 0
|
| 36 |
+
-14.2678 46.8639 49.9853 H 0 0 0 0 0
|
| 37 |
+
-17.5529 46.6058 48.2454 H 0 0 0 0 0
|
| 38 |
+
-17.5379 44.8426 47.9966 H 0 0 0 0 0
|
| 39 |
+
-19.0749 45.6840 48.3142 H 0 0 0 0 0
|
| 40 |
+
-18.2804 46.4243 51.8984 H 0 0 0 0 0
|
| 41 |
+
-18.0371 47.5320 50.5254 H 0 0 0 0 0
|
| 42 |
+
-19.5377 46.5808 50.6470 H 0 0 0 0 0
|
| 43 |
+
-17.8868 43.3235 49.7847 H 0 0 0 0 0
|
| 44 |
+
-18.1548 43.8766 51.4560 H 0 0 0 0 0
|
| 45 |
+
-19.4399 44.0673 50.2382 H 0 0 0 0 0
|
| 46 |
+
-13.9608 44.2534 53.1413 H 0 0 0 0 0
|
| 47 |
+
-14.6704 47.2676 52.3610 H 0 0 0 0 0
|
| 48 |
+
-14.0688 48.2110 54.9913 H 0 0 0 0 0
|
| 49 |
+
-12.8051 48.8053 53.8863 H 0 0 0 0 0
|
| 50 |
+
-14.5098 49.2353 53.6030 H 0 0 0 0 0
|
| 51 |
+
-12.4701 43.4330 51.3835 H 0 0 0 0 0
|
| 52 |
+
-11.5483 44.0920 52.7506 H 0 0 0 0 0
|
| 53 |
+
-9.5532 44.8813 51.7224 H 0 0 0 0 0
|
| 54 |
+
1 2 2 0 0 0
|
| 55 |
+
2 3 2 0 0 0
|
| 56 |
+
2 4 1 0 0 0
|
| 57 |
+
2 5 1 0 0 0
|
| 58 |
+
5 6 1 0 0 0
|
| 59 |
+
6 7 4 0 0 0
|
| 60 |
+
6 8 4 0 0 0
|
| 61 |
+
7 26 4 0 0 0
|
| 62 |
+
8 9 4 0 0 0
|
| 63 |
+
9 10 1 0 0 0
|
| 64 |
+
9 25 4 0 0 0
|
| 65 |
+
10 11 1 0 0 0
|
| 66 |
+
11 12 1 0 0 0
|
| 67 |
+
11 19 1 0 0 0
|
| 68 |
+
12 13 2 0 0 0
|
| 69 |
+
12 14 1 0 0 0
|
| 70 |
+
14 15 1 0 0 0
|
| 71 |
+
15 16 1 0 0 0
|
| 72 |
+
15 17 1 0 0 0
|
| 73 |
+
15 18 1 0 0 0
|
| 74 |
+
19 20 1 0 0 0
|
| 75 |
+
19 24 1 0 0 0
|
| 76 |
+
20 21 2 0 0 0
|
| 77 |
+
20 22 1 0 0 0
|
| 78 |
+
22 23 1 0 0 0
|
| 79 |
+
24 25 1 0 0 0
|
| 80 |
+
25 26 4 0 0 0
|
| 81 |
+
4 27 1 0 0 0
|
| 82 |
+
5 28 1 0 0 0
|
| 83 |
+
7 29 1 0 0 0
|
| 84 |
+
8 30 1 0 0 0
|
| 85 |
+
10 31 1 0 0 0
|
| 86 |
+
10 32 1 0 0 0
|
| 87 |
+
16 33 1 0 0 0
|
| 88 |
+
16 34 1 0 0 0
|
| 89 |
+
16 35 1 0 0 0
|
| 90 |
+
17 36 1 0 0 0
|
| 91 |
+
17 37 1 0 0 0
|
| 92 |
+
17 38 1 0 0 0
|
| 93 |
+
18 39 1 0 0 0
|
| 94 |
+
18 40 1 0 0 0
|
| 95 |
+
18 41 1 0 0 0
|
| 96 |
+
19 42 1 0 0 0
|
| 97 |
+
22 43 1 0 0 0
|
| 98 |
+
23 44 1 0 0 0
|
| 99 |
+
23 45 1 0 0 0
|
| 100 |
+
23 46 1 0 0 0
|
| 101 |
+
24 47 1 0 0 0
|
| 102 |
+
24 48 1 0 0 0
|
| 103 |
+
26 49 1 0 0 0
|
| 104 |
+
M END
|
| 105 |
+
$$$$
|
2f6t/2f6t_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2f6t/2f6t_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2kff/2kff_ligand.mol2
ADDED
|
@@ -0,0 +1,403 @@
|
|
|
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|
|
|
|
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|
|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
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|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:13:02 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2kff_ligand
|
| 7 |
+
192 195 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N 13.2890 17.7240 -15.8450 N.4 1 PHE 0.2394
|
| 14 |
+
2 CA 12.3710 16.7100 -15.2870 C.3 1 PHE 0.0744
|
| 15 |
+
3 C 13.1240 15.7750 -14.3490 C.2 1 PHE 0.2289
|
| 16 |
+
4 O 13.9360 14.9610 -14.7890 O.2 1 PHE -0.3905
|
| 17 |
+
5 CB 11.7120 15.8920 -16.4050 C.3 1 PHE 0.0416
|
| 18 |
+
6 CG 10.8120 16.6950 -17.3080 C.ar 1 PHE -0.0353
|
| 19 |
+
7 CD1 9.5020 16.9610 -16.9420 C.ar 1 PHE -0.0600
|
| 20 |
+
8 CD2 11.2760 17.1790 -18.5220 C.ar 1 PHE -0.0600
|
| 21 |
+
9 CE1 8.6740 17.6990 -17.7660 C.ar 1 PHE -0.0686
|
| 22 |
+
10 CE2 10.4520 17.9180 -19.3490 C.ar 1 PHE -0.0686
|
| 23 |
+
11 CZ 9.1490 18.1760 -18.9720 C.ar 1 PHE -0.0687
|
| 24 |
+
12 N 12.8760 15.9240 -13.0590 N.am 1 ASN -0.2587
|
| 25 |
+
13 CA 13.4720 15.0610 -12.0480 C.3 1 ASN 0.1477
|
| 26 |
+
14 C 12.4380 14.7290 -10.9810 C.2 1 ASN 0.2064
|
| 27 |
+
15 O 12.1700 13.5560 -10.7140 O.2 1 ASN -0.3942
|
| 28 |
+
16 CB 14.6950 15.7400 -11.4220 C.3 1 ASN 0.0773
|
| 29 |
+
17 CG 15.2790 14.9620 -10.2540 C.2 1 ASN 0.1780
|
| 30 |
+
18 OD1 15.2020 13.7340 -10.1970 O.2 1 ASN -0.3970
|
| 31 |
+
19 ND2 15.8760 15.6780 -9.3160 N.am 1 ASN -0.3007
|
| 32 |
+
20 N 11.8530 15.7790 -10.4020 N.am 1 TYR -0.2620
|
| 33 |
+
21 CA 10.8110 15.6560 -9.3810 C.3 1 TYR 0.1390
|
| 34 |
+
22 C 11.3560 15.1420 -8.0510 C.2 1 TYR 0.2057
|
| 35 |
+
23 O 12.4190 14.5210 -7.9830 O.2 1 TYR -0.3942
|
| 36 |
+
24 CB 9.6580 14.7630 -9.8570 C.3 1 TYR 0.0163
|
| 37 |
+
25 CG 8.7310 15.4290 -10.8540 C.ar 1 TYR -0.0493
|
| 38 |
+
26 CD1 7.8330 16.4080 -10.4530 C.ar 1 TYR -0.0685
|
| 39 |
+
27 CD2 8.7660 15.0840 -12.2010 C.ar 1 TYR -0.0685
|
| 40 |
+
28 CE1 6.9980 17.0280 -11.3640 C.ar 1 TYR -0.0398
|
| 41 |
+
29 CE2 7.9330 15.6960 -13.1170 C.ar 1 TYR -0.0398
|
| 42 |
+
30 CZ 7.0040 16.6360 -12.6730 C.ar 1 TYR 0.0805
|
| 43 |
+
31 OH 6.2280 17.2890 -13.6060 O.3 1 TYR -0.3376
|
| 44 |
+
32 N 10.6150 15.4310 -6.9900 N.am 1 GLU -0.2635
|
| 45 |
+
33 CA 10.9860 15.0150 -5.6470 C.3 1 GLU 0.1325
|
| 46 |
+
34 C 10.5600 13.5780 -5.4020 C.2 1 GLU 0.2041
|
| 47 |
+
35 O 9.4100 13.3110 -5.0450 O.2 1 GLU -0.3944
|
| 48 |
+
36 CB 10.3470 15.9230 -4.5870 C.3 1 GLU -0.0008
|
| 49 |
+
37 CG 10.7930 17.3770 -4.6490 C.3 1 GLU 0.0044
|
| 50 |
+
38 CD 10.3450 18.0940 -5.9080 C.2 1 GLU 0.0350
|
| 51 |
+
39 OE1 9.2500 17.7730 -6.4120 O.co2 1 GLU -0.5690
|
| 52 |
+
40 OE2 11.0870 18.9660 -6.4100 O.co2 1 GLU -0.5690
|
| 53 |
+
41 N 11.4780 12.6530 -5.6220 N.am 1 SER -0.2616
|
| 54 |
+
42 CA 11.1930 11.2460 -5.4110 C.3 1 SER 0.1539
|
| 55 |
+
43 C 11.0530 10.9450 -3.9200 C.2 1 SER 0.2063
|
| 56 |
+
44 O 11.9910 11.1340 -3.1430 O.2 1 SER -0.3943
|
| 57 |
+
45 CB 12.2890 10.3760 -6.0380 C.3 1 SER 0.0843
|
| 58 |
+
46 OG 11.9360 8.9990 -6.0130 O.3 1 SER -0.3903
|
| 59 |
+
47 N 9.8720 10.4930 -3.5250 N.am 1 THR -0.2613
|
| 60 |
+
48 CA 9.6120 10.1470 -2.1390 C.3 1 THR 0.1565
|
| 61 |
+
49 C 9.5490 8.6260 -1.9910 C.2 1 THR 0.2066
|
| 62 |
+
50 O 9.0010 8.0910 -1.0270 O.2 1 THR -0.3943
|
| 63 |
+
51 CB 8.2910 10.7810 -1.6580 C.3 1 THR 0.0924
|
| 64 |
+
52 OG1 8.1780 12.1100 -2.1870 O.3 1 THR -0.3874
|
| 65 |
+
53 CG2 8.2280 10.8410 -0.1350 C.3 1 THR -0.0346
|
| 66 |
+
54 N 10.1260 7.9330 -2.9640 N.am 1 ASN -0.2615
|
| 67 |
+
55 CA 10.1550 6.4800 -2.9610 C.3 1 ASN 0.1478
|
| 68 |
+
56 C 11.5060 5.9780 -2.4510 C.2 1 ASN 0.2088
|
| 69 |
+
57 O 12.5260 6.1230 -3.1270 O.2 1 ASN -0.3940
|
| 70 |
+
58 CB 9.8900 5.9410 -4.3680 C.3 1 ASN 0.0773
|
| 71 |
+
59 CG 9.8660 4.4270 -4.4110 C.2 1 ASN 0.1780
|
| 72 |
+
60 OD1 10.8950 3.7810 -4.5920 O.2 1 ASN -0.3970
|
| 73 |
+
61 ND2 8.6910 3.8490 -4.2430 N.am 1 ASN -0.3007
|
| 74 |
+
62 N 11.5230 5.3730 -1.2510 N.am 1 PRO -0.2497
|
| 75 |
+
63 CA 12.7550 4.9030 -0.5940 C.3 1 PRO 0.1338
|
| 76 |
+
64 C 13.3380 3.6520 -1.2440 C.2 1 PRO 0.2042
|
| 77 |
+
65 O 14.3950 3.1650 -0.8430 O.2 1 PRO -0.3944
|
| 78 |
+
66 CB 12.3040 4.5890 0.8430 C.3 1 PRO -0.0104
|
| 79 |
+
67 CG 10.9090 5.1170 0.9610 C.3 1 PRO -0.0281
|
| 80 |
+
68 CD 10.3440 5.1030 -0.4250 C.3 1 PRO 0.0369
|
| 81 |
+
69 N 12.6490 3.1330 -2.2450 N.am 1 PHE -0.2619
|
| 82 |
+
70 CA 13.1090 1.9390 -2.9350 C.3 1 PHE 0.1404
|
| 83 |
+
71 C 13.9690 2.3040 -4.1340 C.2 1 PHE 0.2060
|
| 84 |
+
72 O 14.7310 1.4800 -4.6280 O.2 1 PHE -0.3942
|
| 85 |
+
73 CB 11.9220 1.0800 -3.3790 C.3 1 PHE 0.0214
|
| 86 |
+
74 CG 11.1620 0.4830 -2.2340 C.ar 1 PHE -0.0386
|
| 87 |
+
75 CD1 11.6020 -0.6830 -1.6420 C.ar 1 PHE -0.0601
|
| 88 |
+
76 CD2 10.0070 1.0830 -1.7590 C.ar 1 PHE -0.0601
|
| 89 |
+
77 CE1 10.9050 -1.2490 -0.5940 C.ar 1 PHE -0.0686
|
| 90 |
+
78 CE2 9.3040 0.5260 -0.7110 C.ar 1 PHE -0.0686
|
| 91 |
+
79 CZ 9.7550 -0.6040 -0.1060 C.ar 1 PHE -0.0687
|
| 92 |
+
80 N 13.8430 3.5370 -4.6040 N.am 1 THR -0.2612
|
| 93 |
+
81 CA 14.6310 3.9830 -5.7390 C.3 1 THR 0.1565
|
| 94 |
+
82 C 15.6100 5.0860 -5.3320 C.2 1 THR 0.2065
|
| 95 |
+
83 O 16.7690 5.0520 -5.7410 O.2 1 THR -0.3943
|
| 96 |
+
84 CB 13.7360 4.4480 -6.9210 C.3 1 THR 0.0924
|
| 97 |
+
85 OG1 14.5460 4.7900 -8.0560 O.3 1 THR -0.3874
|
| 98 |
+
86 CG2 12.8710 5.6420 -6.5410 C.3 1 THR -0.0346
|
| 99 |
+
87 N 15.1340 6.0400 -4.5100 N.am 1 ALA -0.2639
|
| 100 |
+
88 CA 15.9450 7.1670 -4.0180 C.3 1 ALA 0.1282
|
| 101 |
+
89 C 16.4000 8.0980 -5.1500 C.2 1 ALA 0.2031
|
| 102 |
+
90 O 15.9630 9.2490 -5.2280 O.2 1 ALA -0.3944
|
| 103 |
+
91 CB 17.1450 6.6660 -3.2220 C.3 1 ALA -0.0244
|
| 104 |
+
92 N 17.2690 7.5760 -6.0140 N.am 1 LYS -0.2695
|
| 105 |
+
93 CA 17.8340 8.3070 -7.1450 C.3 1 LYS 0.0944
|
| 106 |
+
94 C 18.6930 9.4760 -6.6610 C.2 1 LYS 0.0601
|
| 107 |
+
95 O 19.7540 9.2200 -6.0620 O.co2 1 LYS -0.5666
|
| 108 |
+
96 CB 16.7340 8.8140 -8.0810 C.3 1 LYS -0.0177
|
| 109 |
+
97 CG 17.1820 8.9040 -9.5310 C.3 1 LYS -0.0446
|
| 110 |
+
98 CD 16.3640 9.9200 -10.3170 C.3 1 LYS -0.0125
|
| 111 |
+
99 CE 17.0350 11.2880 -10.3310 C.3 1 LYS -0.0354
|
| 112 |
+
100 NZ 17.1160 11.9050 -8.9750 N.4 1 LYS 0.2185
|
| 113 |
+
101 OXT 18.3160 10.6450 -6.9050 O.co2 1 LYS -0.5666
|
| 114 |
+
102 H1 12.7787 18.3353 -16.4630 H 1 PHE 0.2017
|
| 115 |
+
103 H2 14.0247 17.2648 -16.3587 H 1 PHE 0.2017
|
| 116 |
+
104 H3 13.6899 18.2638 -15.0941 H 1 PHE 0.2017
|
| 117 |
+
105 H4 11.5843 17.2263 -14.7174 H 1 PHE 0.1122
|
| 118 |
+
106 H5 11.1131 15.0940 -15.9418 H 1 PHE 0.0507
|
| 119 |
+
107 H6 12.5068 15.4442 -17.0195 H 1 PHE 0.0507
|
| 120 |
+
108 H7 9.1226 16.5858 -15.9984 H 1 PHE 0.0557
|
| 121 |
+
109 H8 12.2965 16.9753 -18.8255 H 1 PHE 0.0557
|
| 122 |
+
110 H9 7.6525 17.9034 -17.4662 H 1 PHE 0.0599
|
| 123 |
+
111 H10 10.8282 18.2950 -20.2931 H 1 PHE 0.0599
|
| 124 |
+
112 H11 8.4999 18.7520 -19.6215 H 1 PHE 0.0559
|
| 125 |
+
113 H12 12.2581 16.6541 -12.7673 H 1 ASN 0.1886
|
| 126 |
+
114 H13 13.7971 14.1260 -12.5276 H 1 ASN 0.0826
|
| 127 |
+
115 H14 14.3968 16.7365 -11.0641 H 1 ASN 0.0551
|
| 128 |
+
116 H15 15.4706 15.8449 -12.1949 H 1 ASN 0.0551
|
| 129 |
+
117 H16 16.2802 15.2241 -8.5219 H 1 ASN 0.1814
|
| 130 |
+
118 H17 15.9232 16.6733 -9.4008 H 1 ASN 0.1814
|
| 131 |
+
119 H18 12.1406 16.6957 -10.6792 H 1 TYR 0.1885
|
| 132 |
+
120 H19 10.4047 16.6631 -9.2062 H 1 TYR 0.0821
|
| 133 |
+
121 H20 9.0654 14.4665 -8.9790 H 1 TYR 0.0453
|
| 134 |
+
122 H21 10.0872 13.8671 -10.3294 H 1 TYR 0.0453
|
| 135 |
+
123 H22 7.7854 16.6915 -9.4078 H 1 TYR 0.0530
|
| 136 |
+
124 H23 9.4591 14.3216 -12.5377 H 1 TYR 0.0530
|
| 137 |
+
125 H24 6.3386 17.8250 -11.0399 H 1 TYR 0.0525
|
| 138 |
+
126 H25 8.0008 15.4481 -14.1701 H 1 TYR 0.0525
|
| 139 |
+
127 H26 5.6454 17.8951 -13.1634 H 1 TYR 0.2458
|
| 140 |
+
128 H27 9.7718 15.9532 -7.1179 H 1 GLU 0.1883
|
| 141 |
+
129 H28 12.0799 15.0812 -5.5525 H 1 GLU 0.0801
|
| 142 |
+
130 H29 10.6055 15.5265 -3.5941 H 1 GLU 0.0330
|
| 143 |
+
131 H30 9.2557 15.8925 -4.7213 H 1 GLU 0.0330
|
| 144 |
+
132 H31 11.8917 17.4064 -4.6039 H 1 GLU 0.0433
|
| 145 |
+
133 H32 10.3759 17.9065 -3.7797 H 1 GLU 0.0433
|
| 146 |
+
134 H33 12.3855 12.9278 -5.9397 H 1 SER 0.1884
|
| 147 |
+
135 H34 10.2384 11.0081 -5.9031 H 1 SER 0.0823
|
| 148 |
+
136 H35 13.2233 10.5162 -5.4746 H 1 SER 0.0606
|
| 149 |
+
137 H36 12.4400 10.6878 -7.0820 H 1 SER 0.0606
|
| 150 |
+
138 H37 12.6327 8.4874 -6.4071 H 1 SER 0.2097
|
| 151 |
+
139 H38 9.1407 10.3874 -4.1988 H 1 THR 0.1884
|
| 152 |
+
140 H39 10.4343 10.5316 -1.5178 H 1 THR 0.0826
|
| 153 |
+
141 H40 7.4513 10.1725 -2.0249 H 1 THR 0.0639
|
| 154 |
+
142 H41 8.1852 12.0735 -3.1363 H 1 THR 0.2101
|
| 155 |
+
143 H42 7.2762 11.2971 0.1749 H 1 THR 0.0257
|
| 156 |
+
144 H43 9.0649 11.4465 0.2431 H 1 THR 0.0257
|
| 157 |
+
145 H44 8.2974 9.8227 0.2753 H 1 THR 0.0257
|
| 158 |
+
146 H45 10.5538 8.4251 -3.7222 H 1 ASN 0.1885
|
| 159 |
+
147 H46 9.3656 6.1133 -2.2884 H 1 ASN 0.0826
|
| 160 |
+
148 H47 10.6834 6.3009 -5.0395 H 1 ASN 0.0551
|
| 161 |
+
149 H48 8.9169 6.3197 -4.7140 H 1 ASN 0.0551
|
| 162 |
+
150 H49 8.6170 2.8519 -4.2621 H 1 ASN 0.1814
|
| 163 |
+
151 H50 7.8750 4.4083 -4.0966 H 1 ASN 0.1814
|
| 164 |
+
152 H51 13.5160 5.6972 -0.6005 H 1 PRO 0.0802
|
| 165 |
+
153 H52 12.9640 5.0872 1.5684 H 1 PRO 0.0313
|
| 166 |
+
154 H53 12.3181 3.5034 1.0196 H 1 PRO 0.0313
|
| 167 |
+
155 H54 10.9208 6.1426 1.3585 H 1 PRO 0.0287
|
| 168 |
+
156 H55 10.3116 4.4737 1.6237 H 1 PRO 0.0287
|
| 169 |
+
157 H56 9.9060 4.1231 -0.6657 H 1 PRO 0.0524
|
| 170 |
+
158 H57 9.5822 5.8863 -0.5515 H 1 PRO 0.0524
|
| 171 |
+
159 H58 11.7964 3.5691 -2.5329 H 1 PHE 0.1885
|
| 172 |
+
160 H59 13.7211 1.3507 -2.2355 H 1 PHE 0.0823
|
| 173 |
+
161 H60 12.2994 0.2630 -4.0115 H 1 PHE 0.0474
|
| 174 |
+
162 H61 11.2350 1.7092 -3.9639 H 1 PHE 0.0474
|
| 175 |
+
163 H62 12.5055 -1.1600 -2.0042 H 1 PHE 0.0557
|
| 176 |
+
164 H63 9.6521 1.9998 -2.2157 H 1 PHE 0.0557
|
| 177 |
+
165 H64 11.2404 -2.1803 -0.1521 H 1 PHE 0.0599
|
| 178 |
+
166 H65 8.3872 0.9921 -0.3684 H 1 PHE 0.0599
|
| 179 |
+
167 H66 9.2289 -1.0076 0.7516 H 1 PHE 0.0559
|
| 180 |
+
168 H67 13.1979 4.1672 -4.1719 H 1 THR 0.1884
|
| 181 |
+
169 H68 15.2219 3.1237 -6.0888 H 1 THR 0.0826
|
| 182 |
+
170 H69 13.0740 3.6146 -7.1989 H 1 THR 0.0639
|
| 183 |
+
171 H70 13.9861 5.0720 -8.7698 H 1 THR 0.2101
|
| 184 |
+
172 H71 12.2553 5.9379 -7.4032 H 1 THR 0.0257
|
| 185 |
+
173 H72 13.5158 6.4826 -6.2452 H 1 THR 0.0257
|
| 186 |
+
174 H73 12.2169 5.3681 -5.7001 H 1 THR 0.0257
|
| 187 |
+
175 H74 14.1794 5.9804 -4.2180 H 1 ALA 0.1883
|
| 188 |
+
176 H75 15.3125 7.7568 -3.3382 H 1 ALA 0.0797
|
| 189 |
+
177 H76 17.7334 7.5247 -2.8663 H 1 ALA 0.0277
|
| 190 |
+
178 H77 17.7732 6.0324 -3.8654 H 1 ALA 0.0277
|
| 191 |
+
179 H78 16.7943 6.0796 -2.3600 H 1 ALA 0.0277
|
| 192 |
+
180 H79 17.5516 6.6262 -5.8801 H 1 LYS 0.1875
|
| 193 |
+
181 H80 18.4767 7.6170 -7.7113 H 1 LYS 0.0726
|
| 194 |
+
182 H81 16.4238 9.8152 -7.7473 H 1 LYS 0.0305
|
| 195 |
+
183 H82 15.8779 8.1259 -8.0208 H 1 LYS 0.0305
|
| 196 |
+
184 H83 17.0674 7.9158 -10.0005 H 1 LYS 0.0269
|
| 197 |
+
185 H84 18.2404 9.2024 -9.5582 H 1 LYS 0.0269
|
| 198 |
+
186 H85 15.3707 10.0141 -9.8539 H 1 LYS 0.0317
|
| 199 |
+
187 H86 16.2537 9.5656 -11.3525 H 1 LYS 0.0317
|
| 200 |
+
188 H87 16.4580 11.9560 -10.9873 H 1 LYS 0.0813
|
| 201 |
+
189 H88 18.0548 11.1754 -10.7276 H 1 LYS 0.0813
|
| 202 |
+
190 H89 17.5664 12.8043 -9.0414 H 1 LYS 0.1994
|
| 203 |
+
191 H90 17.6498 11.3062 -8.3647 H 1 LYS 0.1994
|
| 204 |
+
192 H91 16.1865 12.0215 -8.6028 H 1 LYS 0.1994
|
| 205 |
+
@<TRIPOS>BOND
|
| 206 |
+
1 1 2 1
|
| 207 |
+
2 2 3 1
|
| 208 |
+
3 2 5 1
|
| 209 |
+
4 3 4 2
|
| 210 |
+
5 3 12 am
|
| 211 |
+
6 5 6 1
|
| 212 |
+
7 6 7 ar
|
| 213 |
+
8 6 8 ar
|
| 214 |
+
9 7 9 ar
|
| 215 |
+
10 8 10 ar
|
| 216 |
+
11 9 11 ar
|
| 217 |
+
12 10 11 ar
|
| 218 |
+
13 12 13 1
|
| 219 |
+
14 13 14 1
|
| 220 |
+
15 13 16 1
|
| 221 |
+
16 14 15 2
|
| 222 |
+
17 14 20 am
|
| 223 |
+
18 16 17 1
|
| 224 |
+
19 17 18 2
|
| 225 |
+
20 17 19 am
|
| 226 |
+
21 20 21 1
|
| 227 |
+
22 21 22 1
|
| 228 |
+
23 21 24 1
|
| 229 |
+
24 22 23 2
|
| 230 |
+
25 22 32 am
|
| 231 |
+
26 24 25 1
|
| 232 |
+
27 25 26 ar
|
| 233 |
+
28 25 27 ar
|
| 234 |
+
29 26 28 ar
|
| 235 |
+
30 27 29 ar
|
| 236 |
+
31 28 30 ar
|
| 237 |
+
32 29 30 ar
|
| 238 |
+
33 30 31 1
|
| 239 |
+
34 32 33 1
|
| 240 |
+
35 33 34 1
|
| 241 |
+
36 33 36 1
|
| 242 |
+
37 34 35 2
|
| 243 |
+
38 34 41 am
|
| 244 |
+
39 36 37 1
|
| 245 |
+
40 37 38 1
|
| 246 |
+
41 38 39 ar
|
| 247 |
+
42 38 40 ar
|
| 248 |
+
43 41 42 1
|
| 249 |
+
44 42 43 1
|
| 250 |
+
45 42 45 1
|
| 251 |
+
46 43 44 2
|
| 252 |
+
47 43 47 am
|
| 253 |
+
48 45 46 1
|
| 254 |
+
49 47 48 1
|
| 255 |
+
50 48 49 1
|
| 256 |
+
51 48 51 1
|
| 257 |
+
52 49 50 2
|
| 258 |
+
53 49 54 am
|
| 259 |
+
54 51 52 1
|
| 260 |
+
55 51 53 1
|
| 261 |
+
56 54 55 1
|
| 262 |
+
57 55 56 1
|
| 263 |
+
58 55 58 1
|
| 264 |
+
59 56 57 2
|
| 265 |
+
60 56 62 am
|
| 266 |
+
61 58 59 1
|
| 267 |
+
62 59 60 2
|
| 268 |
+
63 59 61 am
|
| 269 |
+
64 62 63 1
|
| 270 |
+
65 62 68 1
|
| 271 |
+
66 63 64 1
|
| 272 |
+
67 63 66 1
|
| 273 |
+
68 64 65 2
|
| 274 |
+
69 64 69 am
|
| 275 |
+
70 66 67 1
|
| 276 |
+
71 67 68 1
|
| 277 |
+
72 69 70 1
|
| 278 |
+
73 70 71 1
|
| 279 |
+
74 70 73 1
|
| 280 |
+
75 71 72 2
|
| 281 |
+
76 71 80 am
|
| 282 |
+
77 73 74 1
|
| 283 |
+
78 74 75 ar
|
| 284 |
+
79 74 76 ar
|
| 285 |
+
80 75 77 ar
|
| 286 |
+
81 76 78 ar
|
| 287 |
+
82 77 79 ar
|
| 288 |
+
83 78 79 ar
|
| 289 |
+
84 80 81 1
|
| 290 |
+
85 81 82 1
|
| 291 |
+
86 81 84 1
|
| 292 |
+
87 82 83 2
|
| 293 |
+
88 82 87 am
|
| 294 |
+
89 84 85 1
|
| 295 |
+
90 84 86 1
|
| 296 |
+
91 87 88 1
|
| 297 |
+
92 88 89 1
|
| 298 |
+
93 88 91 1
|
| 299 |
+
94 89 90 2
|
| 300 |
+
95 89 92 am
|
| 301 |
+
96 92 93 1
|
| 302 |
+
97 93 94 1
|
| 303 |
+
98 93 96 1
|
| 304 |
+
99 94 95 ar
|
| 305 |
+
100 94 101 ar
|
| 306 |
+
101 96 97 1
|
| 307 |
+
102 97 98 1
|
| 308 |
+
103 98 99 1
|
| 309 |
+
104 99 100 1
|
| 310 |
+
105 1 102 1
|
| 311 |
+
106 1 103 1
|
| 312 |
+
107 1 104 1
|
| 313 |
+
108 2 105 1
|
| 314 |
+
109 5 106 1
|
| 315 |
+
110 5 107 1
|
| 316 |
+
111 7 108 1
|
| 317 |
+
112 8 109 1
|
| 318 |
+
113 9 110 1
|
| 319 |
+
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@<TRIPOS>SUBSTRUCTURE
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| 402 |
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1 PHE 1
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| 403 |
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|
2kff/2kff_ligand.sdf
ADDED
|
@@ -0,0 +1,397 @@
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| 1 |
+
2kff_ligand
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| 2 |
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-I-interpret-
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| 3 |
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| 130 |
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| 133 |
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| 134 |
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| 136 |
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| 137 |
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| 140 |
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| 141 |
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13.2065 10.5086 -5.4647 H 0 0 0 0 0
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| 142 |
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| 143 |
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| 144 |
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| 145 |
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| 146 |
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| 147 |
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| 148 |
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| 149 |
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| 150 |
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|
| 151 |
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| 152 |
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| 153 |
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| 154 |
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| 158 |
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| 159 |
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| 160 |
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| 161 |
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| 185 |
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| 187 |
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| 188 |
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15.9055 8.1073 -8.0329 H 0 0 0 0 0
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| 189 |
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17.0455 7.9257 -9.9919 H 0 0 0 0 0
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| 190 |
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| 191 |
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15.3883 10.0193 -9.8414 H 0 0 0 0 0
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| 192 |
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16.2743 9.5693 -11.3451 H 0 0 0 0 0
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| 193 |
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16.4385 11.9463 -10.9626 H 0 0 0 0 0
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| 194 |
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18.0523 11.1575 -10.7001 H 0 0 0 0 0
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| 195 |
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17.5719 12.8149 -9.0435 H 0 0 0 0 0
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| 196 |
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16.1750 12.0223 -8.5994 H 0 0 0 0 0
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| 197 |
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| 198 |
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17.4775 10.6188 -7.3718 H 0 0 0 0 0
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| 199 |
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1 2 1 0 0 0
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| 200 |
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2 3 1 0 0 0
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| 201 |
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2 5 1 0 0 0
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| 202 |
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3 4 2 0 0 0
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| 203 |
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3 12 1 0 0 0
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| 204 |
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5 6 1 0 0 0
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| 207 |
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7 9 4 0 0 0
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8 10 4 0 0 0
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| 209 |
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| 210 |
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10 11 4 0 0 0
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| 211 |
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12 13 1 0 0 0
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| 212 |
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13 14 1 0 0 0
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| 213 |
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13 16 1 0 0 0
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| 214 |
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14 15 2 0 0 0
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| 215 |
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14 20 1 0 0 0
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| 216 |
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16 17 1 0 0 0
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| 217 |
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17 18 2 0 0 0
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| 218 |
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17 19 1 0 0 0
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| 219 |
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20 21 1 0 0 0
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| 220 |
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21 22 1 0 0 0
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| 221 |
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21 24 1 0 0 0
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| 222 |
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22 23 2 0 0 0
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| 223 |
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22 32 1 0 0 0
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24 25 1 0 0 0
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| 225 |
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| 226 |
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26 28 4 0 0 0
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| 228 |
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| 229 |
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28 30 4 0 0 0
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| 230 |
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29 30 4 0 0 0
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30 31 1 0 0 0
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| 232 |
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32 33 1 0 0 0
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| 233 |
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33 34 1 0 0 0
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33 36 1 0 0 0
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34 35 2 0 0 0
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34 41 1 0 0 0
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36 37 1 0 0 0
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37 38 1 0 0 0
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38 39 2 0 0 0
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38 40 1 0 0 0
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41 42 1 0 0 0
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42 43 1 0 0 0
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42 45 1 0 0 0
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43 44 2 0 0 0
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43 47 1 0 0 0
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45 46 1 0 0 0
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47 48 1 0 0 0
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48 49 1 0 0 0
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48 51 1 0 0 0
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49 50 2 0 0 0
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49 54 1 0 0 0
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51 52 1 0 0 0
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51 53 1 0 0 0
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54 55 1 0 0 0
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55 56 1 0 0 0
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55 58 1 0 0 0
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56 57 2 0 0 0
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| 258 |
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56 62 1 0 0 0
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| 259 |
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58 59 1 0 0 0
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| 260 |
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59 60 2 0 0 0
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| 261 |
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59 61 1 0 0 0
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| 262 |
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62 63 1 0 0 0
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| 263 |
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62 68 1 0 0 0
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63 64 1 0 0 0
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63 66 1 0 0 0
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64 65 2 0 0 0
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64 69 1 0 0 0
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66 67 1 0 0 0
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67 68 1 0 0 0
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69 70 1 0 0 0
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71 72 2 0 0 0
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71 80 1 0 0 0
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73 74 1 0 0 0
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74 75 4 0 0 0
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75 77 4 0 0 0
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76 78 4 0 0 0
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77 79 4 0 0 0
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78 79 4 0 0 0
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80 81 1 0 0 0
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81 82 1 0 0 0
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81 84 1 0 0 0
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82 83 2 0 0 0
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82 87 1 0 0 0
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84 85 1 0 0 0
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84 86 1 0 0 0
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87 88 1 0 0 0
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88 89 1 0 0 0
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88 91 1 0 0 0
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89 90 2 0 0 0
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89 92 1 0 0 0
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92 93 1 0 0 0
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93 94 1 0 0 0
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93 96 1 0 0 0
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94 95 2 0 0 0
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94101 1 0 0 0
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| 299 |
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96 97 1 0 0 0
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| 300 |
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97 98 1 0 0 0
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| 301 |
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98 99 1 0 0 0
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| 302 |
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99100 1 0 0 0
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| 303 |
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1102 1 0 0 0
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| 304 |
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1103 1 0 0 0
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| 305 |
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1104 1 0 0 0
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| 306 |
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2105 1 0 0 0
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| 307 |
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5106 1 0 0 0
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5107 1 0 0 0
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8109 1 0 0 0
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| 311 |
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9110 1 0 0 0
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10111 1 0 0 0
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11112 1 0 0 0
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12113 1 0 0 0
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13114 1 0 0 0
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16115 1 0 0 0
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16116 1 0 0 0
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19117 1 0 0 0
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19118 1 0 0 0
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| 320 |
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20119 1 0 0 0
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21120 1 0 0 0
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24121 1 0 0 0
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24122 1 0 0 0
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26123 1 0 0 0
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27124 1 0 0 0
|
| 326 |
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28125 1 0 0 0
|
| 327 |
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29126 1 0 0 0
|
| 328 |
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31127 1 0 0 0
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32128 1 0 0 0
|
| 330 |
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33129 1 0 0 0
|
| 331 |
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36130 1 0 0 0
|
| 332 |
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36131 1 0 0 0
|
| 333 |
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37132 1 0 0 0
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| 334 |
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37133 1 0 0 0
|
| 335 |
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40134 1 0 0 0
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| 336 |
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41135 1 0 0 0
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| 337 |
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42136 1 0 0 0
|
| 338 |
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45137 1 0 0 0
|
| 339 |
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45138 1 0 0 0
|
| 340 |
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46139 1 0 0 0
|
| 341 |
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47140 1 0 0 0
|
| 342 |
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48141 1 0 0 0
|
| 343 |
+
51142 1 0 0 0
|
| 344 |
+
52143 1 0 0 0
|
| 345 |
+
53144 1 0 0 0
|
| 346 |
+
53145 1 0 0 0
|
| 347 |
+
53146 1 0 0 0
|
| 348 |
+
54147 1 0 0 0
|
| 349 |
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55148 1 0 0 0
|
| 350 |
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58149 1 0 0 0
|
| 351 |
+
58150 1 0 0 0
|
| 352 |
+
61151 1 0 0 0
|
| 353 |
+
61152 1 0 0 0
|
| 354 |
+
63153 1 0 0 0
|
| 355 |
+
66154 1 0 0 0
|
| 356 |
+
66155 1 0 0 0
|
| 357 |
+
67156 1 0 0 0
|
| 358 |
+
67157 1 0 0 0
|
| 359 |
+
68158 1 0 0 0
|
| 360 |
+
68159 1 0 0 0
|
| 361 |
+
69160 1 0 0 0
|
| 362 |
+
70161 1 0 0 0
|
| 363 |
+
73162 1 0 0 0
|
| 364 |
+
73163 1 0 0 0
|
| 365 |
+
75164 1 0 0 0
|
| 366 |
+
76165 1 0 0 0
|
| 367 |
+
77166 1 0 0 0
|
| 368 |
+
78167 1 0 0 0
|
| 369 |
+
79168 1 0 0 0
|
| 370 |
+
80169 1 0 0 0
|
| 371 |
+
81170 1 0 0 0
|
| 372 |
+
84171 1 0 0 0
|
| 373 |
+
85172 1 0 0 0
|
| 374 |
+
86173 1 0 0 0
|
| 375 |
+
86174 1 0 0 0
|
| 376 |
+
86175 1 0 0 0
|
| 377 |
+
87176 1 0 0 0
|
| 378 |
+
88177 1 0 0 0
|
| 379 |
+
91178 1 0 0 0
|
| 380 |
+
91179 1 0 0 0
|
| 381 |
+
91180 1 0 0 0
|
| 382 |
+
92181 1 0 0 0
|
| 383 |
+
93182 1 0 0 0
|
| 384 |
+
96183 1 0 0 0
|
| 385 |
+
96184 1 0 0 0
|
| 386 |
+
97185 1 0 0 0
|
| 387 |
+
97186 1 0 0 0
|
| 388 |
+
98187 1 0 0 0
|
| 389 |
+
98188 1 0 0 0
|
| 390 |
+
99189 1 0 0 0
|
| 391 |
+
99190 1 0 0 0
|
| 392 |
+
100191 1 0 0 0
|
| 393 |
+
100192 1 0 0 0
|
| 394 |
+
100193 1 0 0 0
|
| 395 |
+
101194 1 0 0 0
|
| 396 |
+
M END
|
| 397 |
+
$$$$
|
2kff/2kff_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
@@ -0,0 +1,825 @@
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|
|
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|
|
|
|
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| 1 |
+
REMARK 1 CREATED WITH OPENMM 8.0, 2023-02-21
|
| 2 |
+
ATOM 1 N GLY A 1 -29.054 5.868 -4.042 1.00 0.00 N
|
| 3 |
+
ATOM 2 CA GLY A 1 -29.734 5.380 -5.231 1.00 0.00 C
|
| 4 |
+
ATOM 3 C GLY A 1 -29.324 3.970 -5.615 1.00 0.00 C
|
| 5 |
+
ATOM 4 O GLY A 1 -28.397 3.406 -5.030 1.00 0.00 O
|
| 6 |
+
ATOM 5 N PRO A 2 -30.064 2.955 -6.030 1.00 0.00 N
|
| 7 |
+
ATOM 6 CA PRO A 2 -29.640 1.556 -6.096 1.00 0.00 C
|
| 8 |
+
ATOM 7 C PRO A 2 -28.130 1.405 -6.275 1.00 0.00 C
|
| 9 |
+
ATOM 8 CB PRO A 2 -30.390 1.017 -7.317 1.00 0.00 C
|
| 10 |
+
ATOM 9 O PRO A 2 -27.606 0.291 -6.212 1.00 0.00 O
|
| 11 |
+
ATOM 10 CG PRO A 2 -31.021 2.221 -7.940 1.00 0.00 C
|
| 12 |
+
ATOM 11 CD PRO A 2 -30.789 3.400 -7.038 1.00 0.00 C
|
| 13 |
+
ATOM 12 N LEU A 3 -27.196 2.459 -6.207 1.00 0.00 N
|
| 14 |
+
ATOM 13 CA LEU A 3 -25.775 2.783 -6.145 1.00 0.00 C
|
| 15 |
+
ATOM 14 C LEU A 3 -25.365 3.160 -4.725 1.00 0.00 C
|
| 16 |
+
ATOM 15 CB LEU A 3 -25.444 3.928 -7.106 1.00 0.00 C
|
| 17 |
+
ATOM 16 O LEU A 3 -25.625 4.279 -4.276 1.00 0.00 O
|
| 18 |
+
ATOM 17 CG LEU A 3 -25.660 3.649 -8.595 1.00 0.00 C
|
| 19 |
+
ATOM 18 CD1 LEU A 3 -25.539 4.938 -9.399 1.00 0.00 C
|
| 20 |
+
ATOM 19 CD2 LEU A 3 -24.667 2.606 -9.093 1.00 0.00 C
|
| 21 |
+
ATOM 20 N GLY A 4 -26.005 2.546 -3.652 1.00 0.00 N
|
| 22 |
+
ATOM 21 CA GLY A 4 -25.837 2.435 -2.212 1.00 0.00 C
|
| 23 |
+
ATOM 22 C GLY A 4 -24.948 1.276 -1.802 1.00 0.00 C
|
| 24 |
+
ATOM 23 O GLY A 4 -25.307 0.112 -1.996 1.00 0.00 O
|
| 25 |
+
ATOM 24 N SER A 5 -23.530 1.222 -2.333 1.00 0.00 N
|
| 26 |
+
ATOM 25 CA SER A 5 -22.480 0.646 -1.500 1.00 0.00 C
|
| 27 |
+
ATOM 26 C SER A 5 -21.201 1.473 -1.573 1.00 0.00 C
|
| 28 |
+
ATOM 27 CB SER A 5 -22.190 -0.795 -1.921 1.00 0.00 C
|
| 29 |
+
ATOM 28 O SER A 5 -20.563 1.548 -2.626 1.00 0.00 O
|
| 30 |
+
ATOM 29 OG SER A 5 -21.739 -0.846 -3.263 1.00 0.00 O
|
| 31 |
+
ATOM 30 N ASP A 6 -21.164 2.854 -1.209 1.00 0.00 N
|
| 32 |
+
ATOM 31 CA ASP A 6 -19.932 3.271 -0.547 1.00 0.00 C
|
| 33 |
+
ATOM 32 C ASP A 6 -19.119 2.063 -0.089 1.00 0.00 C
|
| 34 |
+
ATOM 33 CB ASP A 6 -20.244 4.178 0.645 1.00 0.00 C
|
| 35 |
+
ATOM 34 O ASP A 6 -17.979 2.208 0.357 1.00 0.00 O
|
| 36 |
+
ATOM 35 CG ASP A 6 -20.772 5.541 0.230 1.00 0.00 C
|
| 37 |
+
ATOM 36 OD1 ASP A 6 -20.600 5.930 -0.944 1.00 0.00 O
|
| 38 |
+
ATOM 37 OD2 ASP A 6 -21.362 6.233 1.088 1.00 0.00 O
|
| 39 |
+
ATOM 38 N ASP A 7 -19.615 0.833 -0.562 1.00 0.00 N
|
| 40 |
+
ATOM 39 CA ASP A 7 -18.970 -0.373 -0.053 1.00 0.00 C
|
| 41 |
+
ATOM 40 C ASP A 7 -18.170 -1.073 -1.149 1.00 0.00 C
|
| 42 |
+
ATOM 41 CB ASP A 7 -20.010 -1.332 0.532 1.00 0.00 C
|
| 43 |
+
ATOM 42 O ASP A 7 -18.574 -2.126 -1.646 1.00 0.00 O
|
| 44 |
+
ATOM 43 CG ASP A 7 -20.488 -0.918 1.912 1.00 0.00 C
|
| 45 |
+
ATOM 44 OD1 ASP A 7 -19.797 -0.124 2.585 1.00 0.00 O
|
| 46 |
+
ATOM 45 OD2 ASP A 7 -21.567 -1.392 2.330 1.00 0.00 O
|
| 47 |
+
ATOM 46 N VAL A 8 -17.616 -0.382 -2.133 1.00 0.00 N
|
| 48 |
+
ATOM 47 CA VAL A 8 -16.610 -1.219 -2.780 1.00 0.00 C
|
| 49 |
+
ATOM 48 C VAL A 8 -15.811 -1.978 -1.722 1.00 0.00 C
|
| 50 |
+
ATOM 49 CB VAL A 8 -15.662 -0.384 -3.668 1.00 0.00 C
|
| 51 |
+
ATOM 50 O VAL A 8 -15.239 -1.371 -0.815 1.00 0.00 O
|
| 52 |
+
ATOM 51 CG1 VAL A 8 -14.669 -1.289 -4.397 1.00 0.00 C
|
| 53 |
+
ATOM 52 CG2 VAL A 8 -16.463 0.449 -4.668 1.00 0.00 C
|
| 54 |
+
ATOM 53 N GLU A 9 -16.353 -3.138 -1.336 1.00 0.00 N
|
| 55 |
+
ATOM 54 CA GLU A 9 -15.559 -4.014 -0.481 1.00 0.00 C
|
| 56 |
+
ATOM 55 C GLU A 9 -14.065 -3.799 -0.707 1.00 0.00 C
|
| 57 |
+
ATOM 56 CB GLU A 9 -15.922 -5.481 -0.727 1.00 0.00 C
|
| 58 |
+
ATOM 57 O GLU A 9 -13.610 -3.715 -1.850 1.00 0.00 O
|
| 59 |
+
ATOM 58 CG GLU A 9 -15.278 -6.448 0.256 1.00 0.00 C
|
| 60 |
+
ATOM 59 CD GLU A 9 -15.656 -7.899 0.005 1.00 0.00 C
|
| 61 |
+
ATOM 60 OE1 GLU A 9 -16.419 -8.171 -0.950 1.00 0.00 O
|
| 62 |
+
ATOM 61 OE2 GLU A 9 -15.187 -8.771 0.771 1.00 0.00 O
|
| 63 |
+
ATOM 62 N TRP A 10 -13.511 -3.374 0.373 1.00 0.00 N
|
| 64 |
+
ATOM 63 CA TRP A 10 -12.055 -3.281 0.342 1.00 0.00 C
|
| 65 |
+
ATOM 64 C TRP A 10 -11.424 -4.660 0.185 1.00 0.00 C
|
| 66 |
+
ATOM 65 CB TRP A 10 -11.532 -2.609 1.615 1.00 0.00 C
|
| 67 |
+
ATOM 66 O TRP A 10 -11.374 -5.440 1.140 1.00 0.00 O
|
| 68 |
+
ATOM 67 CG TRP A 10 -10.078 -2.245 1.559 1.00 0.00 C
|
| 69 |
+
ATOM 68 CD1 TRP A 10 -9.393 -1.751 0.483 1.00 0.00 C
|
| 70 |
+
ATOM 69 CD2 TRP A 10 -9.128 -2.354 2.623 1.00 0.00 C
|
| 71 |
+
ATOM 70 CE2 TRP A 10 -7.887 -1.906 2.123 1.00 0.00 C
|
| 72 |
+
ATOM 71 CE3 TRP A 10 -9.208 -2.786 3.954 1.00 0.00 C
|
| 73 |
+
ATOM 72 NE1 TRP A 10 -8.075 -1.544 0.817 1.00 0.00 N
|
| 74 |
+
ATOM 73 CH2 TRP A 10 -6.837 -2.307 4.207 1.00 0.00 C
|
| 75 |
+
ATOM 74 CZ2 TRP A 10 -6.731 -1.878 2.908 1.00 0.00 C
|
| 76 |
+
ATOM 75 CZ3 TRP A 10 -8.058 -2.757 4.734 1.00 0.00 C
|
| 77 |
+
ATOM 76 N VAL A 11 -11.116 -5.060 -0.995 1.00 0.00 N
|
| 78 |
+
ATOM 77 CA VAL A 11 -10.691 -6.405 -1.370 1.00 0.00 C
|
| 79 |
+
ATOM 78 C VAL A 11 -9.533 -6.848 -0.478 1.00 0.00 C
|
| 80 |
+
ATOM 79 CB VAL A 11 -10.277 -6.477 -2.856 1.00 0.00 C
|
| 81 |
+
ATOM 80 O VAL A 11 -9.346 -8.044 -0.240 1.00 0.00 O
|
| 82 |
+
ATOM 81 CG1 VAL A 11 -11.477 -6.216 -3.764 1.00 0.00 C
|
| 83 |
+
ATOM 82 CG2 VAL A 11 -9.158 -5.478 -3.146 1.00 0.00 C
|
| 84 |
+
ATOM 83 N VAL A 12 -8.794 -5.911 0.048 1.00 0.00 N
|
| 85 |
+
ATOM 84 CA VAL A 12 -7.630 -6.220 0.872 1.00 0.00 C
|
| 86 |
+
ATOM 85 C VAL A 12 -8.079 -6.578 2.287 1.00 0.00 C
|
| 87 |
+
ATOM 86 CB VAL A 12 -6.633 -5.040 0.912 1.00 0.00 C
|
| 88 |
+
ATOM 87 O VAL A 12 -7.333 -7.208 3.041 1.00 0.00 O
|
| 89 |
+
ATOM 88 CG1 VAL A 12 -5.410 -5.395 1.756 1.00 0.00 C
|
| 90 |
+
ATOM 89 CG2 VAL A 12 -6.215 -4.649 -0.504 1.00 0.00 C
|
| 91 |
+
ATOM 90 N GLY A 13 -9.342 -6.193 2.688 1.00 0.00 N
|
| 92 |
+
ATOM 91 CA GLY A 13 -9.862 -6.324 4.040 1.00 0.00 C
|
| 93 |
+
ATOM 92 C GLY A 13 -9.838 -7.752 4.553 1.00 0.00 C
|
| 94 |
+
ATOM 93 O GLY A 13 -9.572 -7.989 5.733 1.00 0.00 O
|
| 95 |
+
ATOM 94 N LYS A 14 -10.036 -8.684 3.683 1.00 0.00 N
|
| 96 |
+
ATOM 95 CA LYS A 14 -10.104 -10.087 4.081 1.00 0.00 C
|
| 97 |
+
ATOM 96 C LYS A 14 -8.761 -10.572 4.619 1.00 0.00 C
|
| 98 |
+
ATOM 97 CB LYS A 14 -10.542 -10.959 2.903 1.00 0.00 C
|
| 99 |
+
ATOM 98 O LYS A 14 -8.713 -11.373 5.555 1.00 0.00 O
|
| 100 |
+
ATOM 99 CG LYS A 14 -10.711 -12.430 3.251 1.00 0.00 C
|
| 101 |
+
ATOM 100 CD LYS A 14 -11.152 -13.244 2.041 1.00 0.00 C
|
| 102 |
+
ATOM 101 CE LYS A 14 -11.243 -14.729 2.368 1.00 0.00 C
|
| 103 |
+
ATOM 102 NZ LYS A 14 -11.673 -15.530 1.184 1.00 0.00 N
|
| 104 |
+
ATOM 103 N ASP A 15 -7.712 -10.091 4.137 1.00 0.00 N
|
| 105 |
+
ATOM 104 CA ASP A 15 -6.385 -10.564 4.518 1.00 0.00 C
|
| 106 |
+
ATOM 105 C ASP A 15 -5.707 -9.585 5.476 1.00 0.00 C
|
| 107 |
+
ATOM 106 CB ASP A 15 -5.513 -10.776 3.279 1.00 0.00 C
|
| 108 |
+
ATOM 107 O ASP A 15 -4.596 -9.837 5.945 1.00 0.00 O
|
| 109 |
+
ATOM 108 CG ASP A 15 -5.990 -11.924 2.408 1.00 0.00 C
|
| 110 |
+
ATOM 109 OD1 ASP A 15 -6.489 -12.934 2.949 1.00 0.00 O
|
| 111 |
+
ATOM 110 OD2 ASP A 15 -5.864 -11.820 1.168 1.00 0.00 O
|
| 112 |
+
ATOM 111 N LYS A 16 -6.363 -8.519 5.794 1.00 0.00 N
|
| 113 |
+
ATOM 112 CA LYS A 16 -5.754 -7.454 6.584 1.00 0.00 C
|
| 114 |
+
ATOM 113 C LYS A 16 -5.296 -7.970 7.945 1.00 0.00 C
|
| 115 |
+
ATOM 114 CB LYS A 16 -6.733 -6.294 6.766 1.00 0.00 C
|
| 116 |
+
ATOM 115 O LYS A 16 -4.213 -7.616 8.416 1.00 0.00 O
|
| 117 |
+
ATOM 116 CG LYS A 16 -6.157 -5.111 7.532 1.00 0.00 C
|
| 118 |
+
ATOM 117 CD LYS A 16 -7.183 -3.997 7.694 1.00 0.00 C
|
| 119 |
+
ATOM 118 CE LYS A 16 -6.613 -2.820 8.473 1.00 0.00 C
|
| 120 |
+
ATOM 119 NZ LYS A 16 -6.214 -3.213 9.859 1.00 0.00 N
|
| 121 |
+
ATOM 120 N PRO A 17 -6.091 -8.809 8.601 1.00 0.00 N
|
| 122 |
+
ATOM 121 CA PRO A 17 -5.609 -9.277 9.903 1.00 0.00 C
|
| 123 |
+
ATOM 122 C PRO A 17 -4.249 -9.965 9.816 1.00 0.00 C
|
| 124 |
+
ATOM 123 CB PRO A 17 -6.693 -10.263 10.346 1.00 0.00 C
|
| 125 |
+
ATOM 124 O PRO A 17 -3.405 -9.788 10.699 1.00 0.00 O
|
| 126 |
+
ATOM 125 CG PRO A 17 -7.947 -9.767 9.702 1.00 0.00 C
|
| 127 |
+
ATOM 126 CD PRO A 17 -7.604 -9.229 8.342 1.00 0.00 C
|
| 128 |
+
ATOM 127 N THR A 18 -4.035 -10.745 8.824 1.00 0.00 N
|
| 129 |
+
ATOM 128 CA THR A 18 -2.743 -11.394 8.636 1.00 0.00 C
|
| 130 |
+
ATOM 129 C THR A 18 -1.639 -10.357 8.452 1.00 0.00 C
|
| 131 |
+
ATOM 130 CB THR A 18 -2.766 -12.344 7.424 1.00 0.00 C
|
| 132 |
+
ATOM 131 O THR A 18 -0.569 -10.468 9.053 1.00 0.00 O
|
| 133 |
+
ATOM 132 CG2 THR A 18 -1.409 -13.010 7.221 1.00 0.00 C
|
| 134 |
+
ATOM 133 OG1 THR A 18 -3.756 -13.358 7.639 1.00 0.00 O
|
| 135 |
+
ATOM 134 N TYR A 19 -1.885 -9.369 7.722 1.00 0.00 N
|
| 136 |
+
ATOM 135 CA TYR A 19 -0.886 -8.339 7.460 1.00 0.00 C
|
| 137 |
+
ATOM 136 C TYR A 19 -0.677 -7.458 8.685 1.00 0.00 C
|
| 138 |
+
ATOM 137 CB TYR A 19 -1.303 -7.479 6.263 1.00 0.00 C
|
| 139 |
+
ATOM 138 O TYR A 19 0.432 -6.976 8.929 1.00 0.00 O
|
| 140 |
+
ATOM 139 CG TYR A 19 -1.342 -8.234 4.958 1.00 0.00 C
|
| 141 |
+
ATOM 140 CD1 TYR A 19 -0.321 -9.117 4.609 1.00 0.00 C
|
| 142 |
+
ATOM 141 CD2 TYR A 19 -2.398 -8.066 4.067 1.00 0.00 C
|
| 143 |
+
ATOM 142 CE1 TYR A 19 -0.352 -9.813 3.406 1.00 0.00 C
|
| 144 |
+
ATOM 143 CE2 TYR A 19 -2.439 -8.758 2.862 1.00 0.00 C
|
| 145 |
+
ATOM 144 OH TYR A 19 -1.448 -10.315 1.347 1.00 0.00 O
|
| 146 |
+
ATOM 145 CZ TYR A 19 -1.413 -9.628 2.541 1.00 0.00 C
|
| 147 |
+
ATOM 146 N ASP A 20 -1.715 -7.275 9.484 1.00 0.00 N
|
| 148 |
+
ATOM 147 CA ASP A 20 -1.583 -6.533 10.734 1.00 0.00 C
|
| 149 |
+
ATOM 148 C ASP A 20 -0.561 -7.189 11.659 1.00 0.00 C
|
| 150 |
+
ATOM 149 CB ASP A 20 -2.937 -6.425 11.440 1.00 0.00 C
|
| 151 |
+
ATOM 150 O ASP A 20 0.213 -6.499 12.327 1.00 0.00 O
|
| 152 |
+
ATOM 151 CG ASP A 20 -3.870 -5.421 10.784 1.00 0.00 C
|
| 153 |
+
ATOM 152 OD1 ASP A 20 -3.417 -4.649 9.911 1.00 0.00 O
|
| 154 |
+
ATOM 153 OD2 ASP A 20 -5.066 -5.400 11.146 1.00 0.00 O
|
| 155 |
+
ATOM 154 N GLU A 21 -0.642 -8.536 11.696 1.00 0.00 N
|
| 156 |
+
ATOM 155 CA GLU A 21 0.307 -9.249 12.546 1.00 0.00 C
|
| 157 |
+
ATOM 156 C GLU A 21 1.747 -8.909 12.173 1.00 0.00 C
|
| 158 |
+
ATOM 157 CB GLU A 21 0.082 -10.761 12.453 1.00 0.00 C
|
| 159 |
+
ATOM 158 O GLU A 21 2.586 -8.693 13.049 1.00 0.00 O
|
| 160 |
+
ATOM 159 CG GLU A 21 -1.206 -11.233 13.111 1.00 0.00 C
|
| 161 |
+
ATOM 160 CD GLU A 21 -1.485 -12.711 12.892 1.00 0.00 C
|
| 162 |
+
ATOM 161 OE1 GLU A 21 -0.640 -13.405 12.283 1.00 0.00 O
|
| 163 |
+
ATOM 162 OE2 GLU A 21 -2.559 -13.180 13.333 1.00 0.00 O
|
| 164 |
+
ATOM 163 N ILE A 22 2.026 -8.811 10.918 1.00 0.00 N
|
| 165 |
+
ATOM 164 CA ILE A 22 3.360 -8.464 10.442 1.00 0.00 C
|
| 166 |
+
ATOM 165 C ILE A 22 3.642 -6.989 10.723 1.00 0.00 C
|
| 167 |
+
ATOM 166 CB ILE A 22 3.516 -8.761 8.934 1.00 0.00 C
|
| 168 |
+
ATOM 167 O ILE A 22 4.713 -6.640 11.223 1.00 0.00 O
|
| 169 |
+
ATOM 168 CG1 ILE A 22 3.290 -10.253 8.657 1.00 0.00 C
|
| 170 |
+
ATOM 169 CG2 ILE A 22 4.894 -8.315 8.436 1.00 0.00 C
|
| 171 |
+
ATOM 170 CD1 ILE A 22 3.171 -10.596 7.179 1.00 0.00 C
|
| 172 |
+
ATOM 171 N PHE A 23 2.704 -6.107 10.449 1.00 0.00 N
|
| 173 |
+
ATOM 172 CA PHE A 23 2.825 -4.665 10.620 1.00 0.00 C
|
| 174 |
+
ATOM 173 C PHE A 23 3.273 -4.323 12.037 1.00 0.00 C
|
| 175 |
+
ATOM 174 CB PHE A 23 1.495 -3.972 10.309 1.00 0.00 C
|
| 176 |
+
ATOM 175 O PHE A 23 4.163 -3.492 12.229 1.00 0.00 O
|
| 177 |
+
ATOM 176 CG PHE A 23 1.515 -2.485 10.541 1.00 0.00 C
|
| 178 |
+
ATOM 177 CD1 PHE A 23 2.087 -1.630 9.607 1.00 0.00 C
|
| 179 |
+
ATOM 178 CD2 PHE A 23 0.962 -1.943 11.693 1.00 0.00 C
|
| 180 |
+
ATOM 179 CE1 PHE A 23 2.108 -0.253 9.820 1.00 0.00 C
|
| 181 |
+
ATOM 180 CE2 PHE A 23 0.979 -0.569 11.912 1.00 0.00 C
|
| 182 |
+
ATOM 181 CZ PHE A 23 1.553 0.275 10.975 1.00 0.00 C
|
| 183 |
+
ATOM 182 N TYR A 24 2.777 -4.949 13.020 1.00 0.00 N
|
| 184 |
+
ATOM 183 CA TYR A 24 3.067 -4.585 14.403 1.00 0.00 C
|
| 185 |
+
ATOM 184 C TYR A 24 4.439 -5.098 14.825 1.00 0.00 C
|
| 186 |
+
ATOM 185 CB TYR A 24 1.992 -5.139 15.342 1.00 0.00 C
|
| 187 |
+
ATOM 186 O TYR A 24 5.061 -4.548 15.737 1.00 0.00 O
|
| 188 |
+
ATOM 187 CG TYR A 24 0.698 -4.362 15.308 1.00 0.00 C
|
| 189 |
+
ATOM 188 CD1 TYR A 24 0.646 -3.039 15.739 1.00 0.00 C
|
| 190 |
+
ATOM 189 CD2 TYR A 24 -0.475 -4.950 14.846 1.00 0.00 C
|
| 191 |
+
ATOM 190 CE1 TYR A 24 -0.545 -2.320 15.711 1.00 0.00 C
|
| 192 |
+
ATOM 191 CE2 TYR A 24 -1.671 -4.241 14.813 1.00 0.00 C
|
| 193 |
+
ATOM 192 OH TYR A 24 -2.877 -2.222 15.217 1.00 0.00 O
|
| 194 |
+
ATOM 193 CZ TYR A 24 -1.696 -2.928 15.246 1.00 0.00 C
|
| 195 |
+
ATOM 194 N THR A 25 4.938 -6.128 14.118 1.00 0.00 N
|
| 196 |
+
ATOM 195 CA THR A 25 6.294 -6.572 14.420 1.00 0.00 C
|
| 197 |
+
ATOM 196 C THR A 25 7.318 -5.552 13.929 1.00 0.00 C
|
| 198 |
+
ATOM 197 CB THR A 25 6.587 -7.944 13.788 1.00 0.00 C
|
| 199 |
+
ATOM 198 O THR A 25 8.484 -5.597 14.325 1.00 0.00 O
|
| 200 |
+
ATOM 199 CG2 THR A 25 5.527 -8.968 14.179 1.00 0.00 C
|
| 201 |
+
ATOM 200 OG1 THR A 25 6.605 -7.812 12.361 1.00 0.00 O
|
| 202 |
+
ATOM 201 N LEU A 26 6.836 -4.657 13.117 1.00 0.00 N
|
| 203 |
+
ATOM 202 CA LEU A 26 7.748 -3.660 12.566 1.00 0.00 C
|
| 204 |
+
ATOM 203 C LEU A 26 7.779 -2.411 13.439 1.00 0.00 C
|
| 205 |
+
ATOM 204 CB LEU A 26 7.336 -3.289 11.138 1.00 0.00 C
|
| 206 |
+
ATOM 205 O LEU A 26 8.308 -1.374 13.030 1.00 0.00 O
|
| 207 |
+
ATOM 206 CG LEU A 26 7.330 -4.427 10.117 1.00 0.00 C
|
| 208 |
+
ATOM 207 CD1 LEU A 26 6.779 -3.937 8.781 1.00 0.00 C
|
| 209 |
+
ATOM 208 CD2 LEU A 26 8.732 -5.000 9.945 1.00 0.00 C
|
| 210 |
+
ATOM 209 N SER A 27 7.157 -2.406 14.550 1.00 0.00 N
|
| 211 |
+
ATOM 210 CA SER A 27 7.201 -1.399 15.606 1.00 0.00 C
|
| 212 |
+
ATOM 211 C SER A 27 6.728 -0.042 15.096 1.00 0.00 C
|
| 213 |
+
ATOM 212 CB SER A 27 8.617 -1.276 16.172 1.00 0.00 C
|
| 214 |
+
ATOM 213 O SER A 27 7.483 0.932 15.117 1.00 0.00 O
|
| 215 |
+
ATOM 214 OG SER A 27 9.056 -2.514 16.703 1.00 0.00 O
|
| 216 |
+
ATOM 215 N PRO A 28 5.486 0.001 14.681 1.00 0.00 N
|
| 217 |
+
ATOM 216 CA PRO A 28 4.968 1.287 14.209 1.00 0.00 C
|
| 218 |
+
ATOM 217 C PRO A 28 4.975 2.361 15.296 1.00 0.00 C
|
| 219 |
+
ATOM 218 CB PRO A 28 3.536 0.955 13.779 1.00 0.00 C
|
| 220 |
+
ATOM 219 O PRO A 28 4.799 2.050 16.476 1.00 0.00 O
|
| 221 |
+
ATOM 220 CG PRO A 28 3.157 -0.233 14.602 1.00 0.00 C
|
| 222 |
+
ATOM 221 CD PRO A 28 4.392 -1.046 14.864 1.00 0.00 C
|
| 223 |
+
ATOM 222 N VAL A 29 5.269 3.537 14.883 1.00 0.00 N
|
| 224 |
+
ATOM 223 CA VAL A 29 5.177 4.718 15.734 1.00 0.00 C
|
| 225 |
+
ATOM 224 C VAL A 29 3.997 5.582 15.296 1.00 0.00 C
|
| 226 |
+
ATOM 225 CB VAL A 29 6.483 5.543 15.702 1.00 0.00 C
|
| 227 |
+
ATOM 226 O VAL A 29 3.892 5.952 14.125 1.00 0.00 O
|
| 228 |
+
ATOM 227 CG1 VAL A 29 6.367 6.772 16.603 1.00 0.00 C
|
| 229 |
+
ATOM 228 CG2 VAL A 29 7.671 4.679 16.121 1.00 0.00 C
|
| 230 |
+
ATOM 229 N ASN A 30 3.079 5.859 16.242 1.00 0.00 N
|
| 231 |
+
ATOM 230 CA ASN A 30 1.856 6.596 15.940 1.00 0.00 C
|
| 232 |
+
ATOM 231 C ASN A 30 1.082 5.951 14.793 1.00 0.00 C
|
| 233 |
+
ATOM 232 CB ASN A 30 2.175 8.055 15.612 1.00 0.00 C
|
| 234 |
+
ATOM 233 O ASN A 30 0.542 6.650 13.934 1.00 0.00 O
|
| 235 |
+
ATOM 234 CG ASN A 30 2.765 8.803 16.791 1.00 0.00 C
|
| 236 |
+
ATOM 235 ND2 ASN A 30 3.737 9.667 16.519 1.00 0.00 N
|
| 237 |
+
ATOM 236 OD1 ASN A 30 2.353 8.605 17.937 1.00 0.00 O
|
| 238 |
+
ATOM 237 N GLY A 31 1.134 4.620 14.752 1.00 0.00 N
|
| 239 |
+
ATOM 238 CA GLY A 31 0.318 3.848 13.829 1.00 0.00 C
|
| 240 |
+
ATOM 239 C GLY A 31 0.899 3.785 12.429 1.00 0.00 C
|
| 241 |
+
ATOM 240 O GLY A 31 0.217 3.377 11.486 1.00 0.00 O
|
| 242 |
+
ATOM 241 N LYS A 32 2.179 4.224 12.271 1.00 0.00 N
|
| 243 |
+
ATOM 242 CA LYS A 32 2.780 4.269 10.942 1.00 0.00 C
|
| 244 |
+
ATOM 243 C LYS A 32 4.198 3.703 10.961 1.00 0.00 C
|
| 245 |
+
ATOM 244 CB LYS A 32 2.796 5.701 10.408 1.00 0.00 C
|
| 246 |
+
ATOM 245 O LYS A 32 4.904 3.815 11.965 1.00 0.00 O
|
| 247 |
+
ATOM 246 CG LYS A 32 1.415 6.326 10.269 1.00 0.00 C
|
| 248 |
+
ATOM 247 CD LYS A 32 1.489 7.713 9.642 1.00 0.00 C
|
| 249 |
+
ATOM 248 CE LYS A 32 0.110 8.348 9.527 1.00 0.00 C
|
| 250 |
+
ATOM 249 NZ LYS A 32 0.165 9.666 8.825 1.00 0.00 N
|
| 251 |
+
ATOM 250 N ILE A 33 4.609 3.114 9.859 1.00 0.00 N
|
| 252 |
+
ATOM 251 CA ILE A 33 5.979 2.634 9.709 1.00 0.00 C
|
| 253 |
+
ATOM 252 C ILE A 33 6.682 3.418 8.604 1.00 0.00 C
|
| 254 |
+
ATOM 253 CB ILE A 33 6.016 1.120 9.399 1.00 0.00 C
|
| 255 |
+
ATOM 254 O ILE A 33 6.037 3.903 7.671 1.00 0.00 O
|
| 256 |
+
ATOM 255 CG1 ILE A 33 5.260 0.823 8.099 1.00 0.00 C
|
| 257 |
+
ATOM 256 CG2 ILE A 33 5.436 0.316 10.566 1.00 0.00 C
|
| 258 |
+
ATOM 257 CD1 ILE A 33 5.393 -0.617 7.622 1.00 0.00 C
|
| 259 |
+
ATOM 258 N THR A 34 8.002 3.551 8.763 1.00 0.00 N
|
| 260 |
+
ATOM 259 CA THR A 34 8.816 4.274 7.793 1.00 0.00 C
|
| 261 |
+
ATOM 260 C THR A 34 8.992 3.455 6.517 1.00 0.00 C
|
| 262 |
+
ATOM 261 CB THR A 34 10.199 4.625 8.374 1.00 0.00 C
|
| 263 |
+
ATOM 262 O THR A 34 8.715 2.254 6.502 1.00 0.00 O
|
| 264 |
+
ATOM 263 CG2 THR A 34 10.065 5.372 9.698 1.00 0.00 C
|
| 265 |
+
ATOM 264 OG1 THR A 34 10.939 3.418 8.593 1.00 0.00 O
|
| 266 |
+
ATOM 265 N GLY A 35 9.389 4.144 5.444 1.00 0.00 N
|
| 267 |
+
ATOM 266 CA GLY A 35 9.753 3.461 4.213 1.00 0.00 C
|
| 268 |
+
ATOM 267 C GLY A 35 10.833 2.414 4.408 1.00 0.00 C
|
| 269 |
+
ATOM 268 O GLY A 35 10.778 1.339 3.807 1.00 0.00 O
|
| 270 |
+
ATOM 269 N ALA A 36 11.806 2.669 5.267 1.00 0.00 N
|
| 271 |
+
ATOM 270 CA ALA A 36 12.876 1.714 5.545 1.00 0.00 C
|
| 272 |
+
ATOM 271 C ALA A 36 12.319 0.425 6.142 1.00 0.00 C
|
| 273 |
+
ATOM 272 CB ALA A 36 13.907 2.330 6.487 1.00 0.00 C
|
| 274 |
+
ATOM 273 O ALA A 36 12.707 -0.673 5.736 1.00 0.00 O
|
| 275 |
+
ATOM 274 N ASN A 37 11.425 0.539 7.083 1.00 0.00 N
|
| 276 |
+
ATOM 275 CA ASN A 37 10.828 -0.637 7.707 1.00 0.00 C
|
| 277 |
+
ATOM 276 C ASN A 37 9.950 -1.407 6.724 1.00 0.00 C
|
| 278 |
+
ATOM 277 CB ASN A 37 10.018 -0.236 8.941 1.00 0.00 C
|
| 279 |
+
ATOM 278 O ASN A 37 9.965 -2.639 6.706 1.00 0.00 O
|
| 280 |
+
ATOM 279 CG ASN A 37 10.892 0.032 10.151 1.00 0.00 C
|
| 281 |
+
ATOM 280 ND2 ASN A 37 10.291 0.563 11.210 1.00 0.00 N
|
| 282 |
+
ATOM 281 OD1 ASN A 37 12.097 -0.233 10.133 1.00 0.00 O
|
| 283 |
+
ATOM 282 N ALA A 38 9.213 -0.641 5.961 1.00 0.00 N
|
| 284 |
+
ATOM 283 CA ALA A 38 8.384 -1.289 4.949 1.00 0.00 C
|
| 285 |
+
ATOM 284 C ALA A 38 9.241 -2.049 3.941 1.00 0.00 C
|
| 286 |
+
ATOM 285 CB ALA A 38 7.514 -0.259 4.233 1.00 0.00 C
|
| 287 |
+
ATOM 286 O ALA A 38 8.929 -3.187 3.583 1.00 0.00 O
|
| 288 |
+
ATOM 287 N LYS A 39 10.332 -1.440 3.545 1.00 0.00 N
|
| 289 |
+
ATOM 288 CA LYS A 39 11.219 -2.072 2.572 1.00 0.00 C
|
| 290 |
+
ATOM 289 C LYS A 39 11.780 -3.384 3.110 1.00 0.00 C
|
| 291 |
+
ATOM 290 CB LYS A 39 12.362 -1.127 2.195 1.00 0.00 C
|
| 292 |
+
ATOM 291 O LYS A 39 11.849 -4.379 2.385 1.00 0.00 O
|
| 293 |
+
ATOM 292 CG LYS A 39 13.291 -1.677 1.125 1.00 0.00 C
|
| 294 |
+
ATOM 293 CD LYS A 39 14.363 -0.664 0.740 1.00 0.00 C
|
| 295 |
+
ATOM 294 CE LYS A 39 15.300 -1.217 -0.325 1.00 0.00 C
|
| 296 |
+
ATOM 295 NZ LYS A 39 16.330 -0.214 -0.731 1.00 0.00 N
|
| 297 |
+
ATOM 296 N LYS A 40 12.151 -3.442 4.350 1.00 0.00 N
|
| 298 |
+
ATOM 297 CA LYS A 40 12.707 -4.640 4.971 1.00 0.00 C
|
| 299 |
+
ATOM 298 C LYS A 40 11.756 -5.825 4.830 1.00 0.00 C
|
| 300 |
+
ATOM 299 CB LYS A 40 13.012 -4.386 6.448 1.00 0.00 C
|
| 301 |
+
ATOM 300 O LYS A 40 12.194 -6.957 4.616 1.00 0.00 O
|
| 302 |
+
ATOM 301 CG LYS A 40 14.265 -3.555 6.688 1.00 0.00 C
|
| 303 |
+
ATOM 302 CD LYS A 40 14.503 -3.321 8.174 1.00 0.00 C
|
| 304 |
+
ATOM 303 CE LYS A 40 15.706 -2.419 8.412 1.00 0.00 C
|
| 305 |
+
ATOM 304 NZ LYS A 40 15.880 -2.097 9.861 1.00 0.00 N
|
| 306 |
+
ATOM 305 N GLU A 41 10.504 -5.515 4.913 1.00 0.00 N
|
| 307 |
+
ATOM 306 CA GLU A 41 9.502 -6.571 4.808 1.00 0.00 C
|
| 308 |
+
ATOM 307 C GLU A 41 9.181 -6.884 3.349 1.00 0.00 C
|
| 309 |
+
ATOM 308 CB GLU A 41 8.224 -6.176 5.554 1.00 0.00 C
|
| 310 |
+
ATOM 309 O GLU A 41 9.090 -8.052 2.965 1.00 0.00 O
|
| 311 |
+
ATOM 310 CG GLU A 41 7.186 -7.286 5.625 1.00 0.00 C
|
| 312 |
+
ATOM 311 CD GLU A 41 7.703 -8.549 6.297 1.00 0.00 C
|
| 313 |
+
ATOM 312 OE1 GLU A 41 8.665 -8.462 7.093 1.00 0.00 O
|
| 314 |
+
ATOM 313 OE2 GLU A 41 7.140 -9.632 6.025 1.00 0.00 O
|
| 315 |
+
ATOM 314 N MET A 42 9.080 -5.909 2.516 1.00 0.00 N
|
| 316 |
+
ATOM 315 CA MET A 42 8.662 -6.084 1.129 1.00 0.00 C
|
| 317 |
+
ATOM 316 C MET A 42 9.712 -6.854 0.337 1.00 0.00 C
|
| 318 |
+
ATOM 317 CB MET A 42 8.400 -4.728 0.471 1.00 0.00 C
|
| 319 |
+
ATOM 318 O MET A 42 9.374 -7.652 -0.540 1.00 0.00 O
|
| 320 |
+
ATOM 319 CG MET A 42 7.177 -4.008 1.015 1.00 0.00 C
|
| 321 |
+
ATOM 320 SD MET A 42 7.019 -2.300 0.364 1.00 0.00 S
|
| 322 |
+
ATOM 321 CE MET A 42 6.599 -2.652 -1.365 1.00 0.00 C
|
| 323 |
+
ATOM 322 N VAL A 43 10.977 -6.740 0.620 1.00 0.00 N
|
| 324 |
+
ATOM 323 CA VAL A 43 12.060 -7.368 -0.131 1.00 0.00 C
|
| 325 |
+
ATOM 324 C VAL A 43 12.037 -8.878 0.094 1.00 0.00 C
|
| 326 |
+
ATOM 325 CB VAL A 43 13.436 -6.790 0.268 1.00 0.00 C
|
| 327 |
+
ATOM 326 O VAL A 43 12.622 -9.636 -0.682 1.00 0.00 O
|
| 328 |
+
ATOM 327 CG1 VAL A 43 13.532 -5.313 -0.109 1.00 0.00 C
|
| 329 |
+
ATOM 328 CG2 VAL A 43 13.681 -6.981 1.764 1.00 0.00 C
|
| 330 |
+
ATOM 329 N LYS A 44 11.385 -9.313 1.184 1.00 0.00 N
|
| 331 |
+
ATOM 330 CA LYS A 44 11.270 -10.749 1.423 1.00 0.00 C
|
| 332 |
+
ATOM 331 C LYS A 44 10.537 -11.441 0.277 1.00 0.00 C
|
| 333 |
+
ATOM 332 CB LYS A 44 10.550 -11.018 2.745 1.00 0.00 C
|
| 334 |
+
ATOM 333 O LYS A 44 10.632 -12.660 0.118 1.00 0.00 O
|
| 335 |
+
ATOM 334 CG LYS A 44 11.341 -10.602 3.976 1.00 0.00 C
|
| 336 |
+
ATOM 335 CD LYS A 44 10.555 -10.855 5.257 1.00 0.00 C
|
| 337 |
+
ATOM 336 CE LYS A 44 11.337 -10.420 6.488 1.00 0.00 C
|
| 338 |
+
ATOM 337 NZ LYS A 44 10.551 -10.621 7.743 1.00 0.00 N
|
| 339 |
+
ATOM 338 N SER A 45 9.808 -10.680 -0.555 1.00 0.00 N
|
| 340 |
+
ATOM 339 CA SER A 45 9.048 -11.227 -1.674 1.00 0.00 C
|
| 341 |
+
ATOM 340 C SER A 45 9.964 -11.600 -2.835 1.00 0.00 C
|
| 342 |
+
ATOM 341 CB SER A 45 7.994 -10.226 -2.147 1.00 0.00 C
|
| 343 |
+
ATOM 342 O SER A 45 9.564 -12.345 -3.733 1.00 0.00 O
|
| 344 |
+
ATOM 343 OG SER A 45 8.606 -9.094 -2.742 1.00 0.00 O
|
| 345 |
+
ATOM 344 N LYS A 46 11.090 -10.962 -2.871 1.00 0.00 N
|
| 346 |
+
ATOM 345 CA LYS A 46 12.109 -11.190 -3.893 1.00 0.00 C
|
| 347 |
+
ATOM 346 C LYS A 46 11.713 -10.542 -5.217 1.00 0.00 C
|
| 348 |
+
ATOM 347 CB LYS A 46 12.342 -12.688 -4.092 1.00 0.00 C
|
| 349 |
+
ATOM 348 O LYS A 46 12.349 -10.781 -6.245 1.00 0.00 O
|
| 350 |
+
ATOM 349 CG LYS A 46 12.754 -13.425 -2.825 1.00 0.00 C
|
| 351 |
+
ATOM 350 CD LYS A 46 14.055 -12.874 -2.257 1.00 0.00 C
|
| 352 |
+
ATOM 351 CE LYS A 46 14.527 -13.680 -1.054 1.00 0.00 C
|
| 353 |
+
ATOM 352 NZ LYS A 46 15.709 -13.051 -0.394 1.00 0.00 N
|
| 354 |
+
ATOM 353 N LEU A 47 10.708 -9.693 -5.151 1.00 0.00 N
|
| 355 |
+
ATOM 354 CA LEU A 47 10.419 -8.865 -6.318 1.00 0.00 C
|
| 356 |
+
ATOM 355 C LEU A 47 11.515 -7.827 -6.533 1.00 0.00 C
|
| 357 |
+
ATOM 356 CB LEU A 47 9.064 -8.169 -6.158 1.00 0.00 C
|
| 358 |
+
ATOM 357 O LEU A 47 12.169 -7.401 -5.579 1.00 0.00 O
|
| 359 |
+
ATOM 358 CG LEU A 47 7.826 -9.058 -6.283 1.00 0.00 C
|
| 360 |
+
ATOM 359 CD1 LEU A 47 6.571 -8.273 -5.915 1.00 0.00 C
|
| 361 |
+
ATOM 360 CD2 LEU A 47 7.714 -9.623 -7.696 1.00 0.00 C
|
| 362 |
+
ATOM 361 N PRO A 48 11.720 -7.505 -7.810 1.00 0.00 N
|
| 363 |
+
ATOM 362 CA PRO A 48 12.724 -6.473 -8.077 1.00 0.00 C
|
| 364 |
+
ATOM 363 C PRO A 48 12.406 -5.147 -7.387 1.00 0.00 C
|
| 365 |
+
ATOM 364 CB PRO A 48 12.677 -6.321 -9.600 1.00 0.00 C
|
| 366 |
+
ATOM 365 O PRO A 48 11.234 -4.805 -7.211 1.00 0.00 O
|
| 367 |
+
ATOM 366 CG PRO A 48 12.092 -7.604 -10.094 1.00 0.00 C
|
| 368 |
+
ATOM 367 CD PRO A 48 11.129 -8.117 -9.063 1.00 0.00 C
|
| 369 |
+
ATOM 368 N ASN A 49 13.417 -4.408 -7.130 1.00 0.00 N
|
| 370 |
+
ATOM 369 CA ASN A 49 13.276 -3.124 -6.454 1.00 0.00 C
|
| 371 |
+
ATOM 370 C ASN A 49 12.421 -2.154 -7.264 1.00 0.00 C
|
| 372 |
+
ATOM 371 CB ASN A 49 14.649 -2.511 -6.170 1.00 0.00 C
|
| 373 |
+
ATOM 372 O ASN A 49 11.697 -1.334 -6.698 1.00 0.00 O
|
| 374 |
+
ATOM 373 CG ASN A 49 15.363 -3.187 -5.016 1.00 0.00 C
|
| 375 |
+
ATOM 374 ND2 ASN A 49 16.680 -3.030 -4.960 1.00 0.00 N
|
| 376 |
+
ATOM 375 OD1 ASN A 49 14.735 -3.845 -4.182 1.00 0.00 O
|
| 377 |
+
ATOM 376 N THR A 50 12.523 -2.243 -8.495 1.00 0.00 N
|
| 378 |
+
ATOM 377 CA THR A 50 11.739 -1.355 -9.346 1.00 0.00 C
|
| 379 |
+
ATOM 378 C THR A 50 10.246 -1.633 -9.187 1.00 0.00 C
|
| 380 |
+
ATOM 379 CB THR A 50 12.136 -1.504 -10.825 1.00 0.00 C
|
| 381 |
+
ATOM 380 O THR A 50 9.433 -0.707 -9.195 1.00 0.00 O
|
| 382 |
+
ATOM 381 CG2 THR A 50 13.575 -1.051 -11.056 1.00 0.00 C
|
| 383 |
+
ATOM 382 OG1 THR A 50 12.011 -2.878 -11.212 1.00 0.00 O
|
| 384 |
+
ATOM 383 N VAL A 51 9.940 -2.853 -9.027 1.00 0.00 N
|
| 385 |
+
ATOM 384 CA VAL A 51 8.547 -3.239 -8.830 1.00 0.00 C
|
| 386 |
+
ATOM 385 C VAL A 51 8.086 -2.818 -7.438 1.00 0.00 C
|
| 387 |
+
ATOM 386 CB VAL A 51 8.348 -4.759 -9.021 1.00 0.00 C
|
| 388 |
+
ATOM 387 O VAL A 51 6.996 -2.260 -7.280 1.00 0.00 O
|
| 389 |
+
ATOM 388 CG1 VAL A 51 6.938 -5.175 -8.605 1.00 0.00 C
|
| 390 |
+
ATOM 389 CG2 VAL A 51 8.617 -5.155 -10.472 1.00 0.00 C
|
| 391 |
+
ATOM 390 N LEU A 52 8.948 -3.043 -6.488 1.00 0.00 N
|
| 392 |
+
ATOM 391 CA LEU A 52 8.613 -2.670 -5.119 1.00 0.00 C
|
| 393 |
+
ATOM 392 C LEU A 52 8.459 -1.158 -4.989 1.00 0.00 C
|
| 394 |
+
ATOM 393 CB LEU A 52 9.686 -3.170 -4.149 1.00 0.00 C
|
| 395 |
+
ATOM 394 O LEU A 52 7.620 -0.678 -4.224 1.00 0.00 O
|
| 396 |
+
ATOM 395 CG LEU A 52 9.796 -4.687 -3.983 1.00 0.00 C
|
| 397 |
+
ATOM 396 CD1 LEU A 52 10.928 -5.034 -3.024 1.00 0.00 C
|
| 398 |
+
ATOM 397 CD2 LEU A 52 8.474 -5.268 -3.491 1.00 0.00 C
|
| 399 |
+
ATOM 398 N GLY A 53 9.257 -0.367 -5.729 1.00 0.00 N
|
| 400 |
+
ATOM 399 CA GLY A 53 9.084 1.077 -5.777 1.00 0.00 C
|
| 401 |
+
ATOM 400 C GLY A 53 7.728 1.497 -6.312 1.00 0.00 C
|
| 402 |
+
ATOM 401 O GLY A 53 7.105 2.420 -5.784 1.00 0.00 O
|
| 403 |
+
ATOM 402 N LYS A 54 7.250 0.827 -7.323 1.00 0.00 N
|
| 404 |
+
ATOM 403 CA LYS A 54 5.919 1.103 -7.857 1.00 0.00 C
|
| 405 |
+
ATOM 404 C LYS A 54 4.837 0.768 -6.835 1.00 0.00 C
|
| 406 |
+
ATOM 405 CB LYS A 54 5.684 0.317 -9.147 1.00 0.00 C
|
| 407 |
+
ATOM 406 O LYS A 54 3.877 1.523 -6.670 1.00 0.00 O
|
| 408 |
+
ATOM 407 CG LYS A 54 6.472 0.837 -10.341 1.00 0.00 C
|
| 409 |
+
ATOM 408 CD LYS A 54 6.230 -0.013 -11.582 1.00 0.00 C
|
| 410 |
+
ATOM 409 CE LYS A 54 7.090 0.447 -12.752 1.00 0.00 C
|
| 411 |
+
ATOM 410 NZ LYS A 54 6.868 -0.391 -13.967 1.00 0.00 N
|
| 412 |
+
ATOM 411 N ILE A 55 5.066 -0.357 -6.206 1.00 0.00 N
|
| 413 |
+
ATOM 412 CA ILE A 55 4.101 -0.789 -5.201 1.00 0.00 C
|
| 414 |
+
ATOM 413 C ILE A 55 4.066 0.216 -4.053 1.00 0.00 C
|
| 415 |
+
ATOM 414 CB ILE A 55 4.434 -2.201 -4.669 1.00 0.00 C
|
| 416 |
+
ATOM 415 O ILE A 55 2.990 0.593 -3.582 1.00 0.00 O
|
| 417 |
+
ATOM 416 CG1 ILE A 55 4.151 -3.258 -5.744 1.00 0.00 C
|
| 418 |
+
ATOM 417 CG2 ILE A 55 3.645 -2.495 -3.390 1.00 0.00 C
|
| 419 |
+
ATOM 418 CD1 ILE A 55 4.654 -4.651 -5.390 1.00 0.00 C
|
| 420 |
+
ATOM 419 N TRP A 56 5.162 0.745 -3.611 1.00 0.00 N
|
| 421 |
+
ATOM 420 CA TRP A 56 5.230 1.776 -2.580 1.00 0.00 C
|
| 422 |
+
ATOM 421 C TRP A 56 4.457 3.021 -3.004 1.00 0.00 C
|
| 423 |
+
ATOM 422 CB TRP A 56 6.686 2.141 -2.280 1.00 0.00 C
|
| 424 |
+
ATOM 423 O TRP A 56 3.683 3.575 -2.221 1.00 0.00 O
|
| 425 |
+
ATOM 424 CG TRP A 56 6.843 3.341 -1.395 1.00 0.00 C
|
| 426 |
+
ATOM 425 CD1 TRP A 56 7.032 4.637 -1.790 1.00 0.00 C
|
| 427 |
+
ATOM 426 CD2 TRP A 56 6.829 3.355 0.035 1.00 0.00 C
|
| 428 |
+
ATOM 427 CE2 TRP A 56 7.014 4.695 0.442 1.00 0.00 C
|
| 429 |
+
ATOM 428 CE3 TRP A 56 6.677 2.364 1.014 1.00 0.00 C
|
| 430 |
+
ATOM 429 NE1 TRP A 56 7.135 5.455 -0.689 1.00 0.00 N
|
| 431 |
+
ATOM 430 CH2 TRP A 56 6.900 4.080 2.725 1.00 0.00 C
|
| 432 |
+
ATOM 431 CZ2 TRP A 56 7.051 5.069 1.788 1.00 0.00 C
|
| 433 |
+
ATOM 432 CZ3 TRP A 56 6.714 2.738 2.353 1.00 0.00 C
|
| 434 |
+
ATOM 433 N LYS A 57 4.618 3.450 -4.240 1.00 0.00 N
|
| 435 |
+
ATOM 434 CA LYS A 57 3.951 4.655 -4.728 1.00 0.00 C
|
| 436 |
+
ATOM 435 C LYS A 57 2.435 4.485 -4.723 1.00 0.00 C
|
| 437 |
+
ATOM 436 CB LYS A 57 4.436 5.002 -6.137 1.00 0.00 C
|
| 438 |
+
ATOM 437 O LYS A 57 1.702 5.417 -4.386 1.00 0.00 O
|
| 439 |
+
ATOM 438 CG LYS A 57 5.845 5.575 -6.183 1.00 0.00 C
|
| 440 |
+
ATOM 439 CD LYS A 57 6.263 5.915 -7.609 1.00 0.00 C
|
| 441 |
+
ATOM 440 CE LYS A 57 7.690 6.445 -7.662 1.00 0.00 C
|
| 442 |
+
ATOM 441 NZ LYS A 57 8.136 6.695 -9.065 1.00 0.00 N
|
| 443 |
+
ATOM 442 N LEU A 58 2.016 3.275 -5.009 1.00 0.00 N
|
| 444 |
+
ATOM 443 CA LEU A 58 0.586 2.991 -5.029 1.00 0.00 C
|
| 445 |
+
ATOM 444 C LEU A 58 0.036 2.869 -3.612 1.00 0.00 C
|
| 446 |
+
ATOM 445 CB LEU A 58 0.305 1.704 -5.809 1.00 0.00 C
|
| 447 |
+
ATOM 446 O LEU A 58 -1.085 3.302 -3.336 1.00 0.00 O
|
| 448 |
+
ATOM 447 CG LEU A 58 0.515 1.770 -7.323 1.00 0.00 C
|
| 449 |
+
ATOM 448 CD1 LEU A 58 0.466 0.371 -7.926 1.00 0.00 C
|
| 450 |
+
ATOM 449 CD2 LEU A 58 -0.529 2.674 -7.969 1.00 0.00 C
|
| 451 |
+
ATOM 450 N ALA A 59 0.827 2.313 -2.711 1.00 0.00 N
|
| 452 |
+
ATOM 451 CA ALA A 59 0.346 1.976 -1.375 1.00 0.00 C
|
| 453 |
+
ATOM 452 C ALA A 59 0.359 3.198 -0.461 1.00 0.00 C
|
| 454 |
+
ATOM 453 CB ALA A 59 1.192 0.856 -0.772 1.00 0.00 C
|
| 455 |
+
ATOM 454 O ALA A 59 -0.410 3.270 0.501 1.00 0.00 O
|
| 456 |
+
ATOM 455 N ASP A 60 1.378 4.088 -0.641 1.00 0.00 N
|
| 457 |
+
ATOM 456 CA ASP A 60 1.426 5.333 0.120 1.00 0.00 C
|
| 458 |
+
ATOM 457 C ASP A 60 0.374 6.323 -0.378 1.00 0.00 C
|
| 459 |
+
ATOM 458 CB ASP A 60 2.819 5.961 0.038 1.00 0.00 C
|
| 460 |
+
ATOM 459 O ASP A 60 0.714 7.371 -0.931 1.00 0.00 O
|
| 461 |
+
ATOM 460 CG ASP A 60 2.965 7.198 0.906 1.00 0.00 C
|
| 462 |
+
ATOM 461 OD1 ASP A 60 2.204 7.349 1.886 1.00 0.00 O
|
| 463 |
+
ATOM 462 OD2 ASP A 60 3.846 8.032 0.605 1.00 0.00 O
|
| 464 |
+
ATOM 463 N VAL A 61 -0.876 6.029 -0.117 1.00 0.00 N
|
| 465 |
+
ATOM 464 CA VAL A 61 -2.007 6.682 -0.768 1.00 0.00 C
|
| 466 |
+
ATOM 465 C VAL A 61 -2.005 8.173 -0.434 1.00 0.00 C
|
| 467 |
+
ATOM 466 CB VAL A 61 -3.350 6.043 -0.348 1.00 0.00 C
|
| 468 |
+
ATOM 467 O VAL A 61 -2.215 9.012 -1.312 1.00 0.00 O
|
| 469 |
+
ATOM 468 CG1 VAL A 61 -4.525 6.810 -0.953 1.00 0.00 C
|
| 470 |
+
ATOM 469 CG2 VAL A 61 -3.396 4.574 -0.765 1.00 0.00 C
|
| 471 |
+
ATOM 470 N ASP A 62 -1.663 8.590 0.767 1.00 0.00 N
|
| 472 |
+
ATOM 471 CA ASP A 62 -1.720 9.999 1.146 1.00 0.00 C
|
| 473 |
+
ATOM 472 C ASP A 62 -0.362 10.671 0.967 1.00 0.00 C
|
| 474 |
+
ATOM 473 CB ASP A 62 -2.194 10.146 2.593 1.00 0.00 C
|
| 475 |
+
ATOM 474 O ASP A 62 -0.181 11.828 1.349 1.00 0.00 O
|
| 476 |
+
ATOM 475 CG ASP A 62 -1.324 9.387 3.581 1.00 0.00 C
|
| 477 |
+
ATOM 476 OD1 ASP A 62 -0.251 8.884 3.188 1.00 0.00 O
|
| 478 |
+
ATOM 477 OD2 ASP A 62 -1.718 9.291 4.764 1.00 0.00 O
|
| 479 |
+
ATOM 478 N LYS A 63 0.611 9.953 0.468 1.00 0.00 N
|
| 480 |
+
ATOM 479 CA LYS A 63 1.904 10.463 0.021 1.00 0.00 C
|
| 481 |
+
ATOM 480 C LYS A 63 2.674 11.096 1.177 1.00 0.00 C
|
| 482 |
+
ATOM 481 CB LYS A 63 1.721 11.480 -1.106 1.00 0.00 C
|
| 483 |
+
ATOM 482 O LYS A 63 3.239 12.182 1.032 1.00 0.00 O
|
| 484 |
+
ATOM 483 CG LYS A 63 0.936 10.949 -2.296 1.00 0.00 C
|
| 485 |
+
ATOM 484 CD LYS A 63 1.643 9.769 -2.951 1.00 0.00 C
|
| 486 |
+
ATOM 485 CE LYS A 63 0.893 9.278 -4.181 1.00 0.00 C
|
| 487 |
+
ATOM 486 NZ LYS A 63 1.413 7.962 -4.659 1.00 0.00 N
|
| 488 |
+
ATOM 487 N ASP A 64 2.661 10.517 2.352 1.00 0.00 N
|
| 489 |
+
ATOM 488 CA ASP A 64 3.359 11.104 3.492 1.00 0.00 C
|
| 490 |
+
ATOM 489 C ASP A 64 4.651 10.346 3.794 1.00 0.00 C
|
| 491 |
+
ATOM 490 CB ASP A 64 2.456 11.117 4.726 1.00 0.00 C
|
| 492 |
+
ATOM 491 O ASP A 64 5.346 10.655 4.763 1.00 0.00 O
|
| 493 |
+
ATOM 492 CG ASP A 64 2.119 9.723 5.228 1.00 0.00 C
|
| 494 |
+
ATOM 493 OD1 ASP A 64 2.489 8.730 4.567 1.00 0.00 O
|
| 495 |
+
ATOM 494 OD2 ASP A 64 1.474 9.619 6.295 1.00 0.00 O
|
| 496 |
+
ATOM 495 N GLY A 65 5.004 9.429 2.940 1.00 0.00 N
|
| 497 |
+
ATOM 496 CA GLY A 65 6.262 8.706 3.040 1.00 0.00 C
|
| 498 |
+
ATOM 497 C GLY A 65 6.246 7.622 4.100 1.00 0.00 C
|
| 499 |
+
ATOM 498 O GLY A 65 7.288 7.050 4.427 1.00 0.00 O
|
| 500 |
+
ATOM 499 N LEU A 66 5.023 7.429 4.673 1.00 0.00 N
|
| 501 |
+
ATOM 500 CA LEU A 66 4.802 6.413 5.695 1.00 0.00 C
|
| 502 |
+
ATOM 501 C LEU A 66 3.653 5.489 5.305 1.00 0.00 C
|
| 503 |
+
ATOM 502 CB LEU A 66 4.508 7.068 7.048 1.00 0.00 C
|
| 504 |
+
ATOM 503 O LEU A 66 2.853 5.823 4.427 1.00 0.00 O
|
| 505 |
+
ATOM 504 CG LEU A 66 5.551 8.062 7.560 1.00 0.00 C
|
| 506 |
+
ATOM 505 CD1 LEU A 66 5.000 8.843 8.748 1.00 0.00 C
|
| 507 |
+
ATOM 506 CD2 LEU A 66 6.838 7.338 7.941 1.00 0.00 C
|
| 508 |
+
ATOM 507 N LEU A 67 3.631 4.338 5.922 1.00 0.00 N
|
| 509 |
+
ATOM 508 CA LEU A 67 2.488 3.451 5.728 1.00 0.00 C
|
| 510 |
+
ATOM 509 C LEU A 67 1.772 3.190 7.049 1.00 0.00 C
|
| 511 |
+
ATOM 510 CB LEU A 67 2.936 2.127 5.107 1.00 0.00 C
|
| 512 |
+
ATOM 511 O LEU A 67 2.403 2.810 8.038 1.00 0.00 O
|
| 513 |
+
ATOM 512 CG LEU A 67 3.581 2.211 3.723 1.00 0.00 C
|
| 514 |
+
ATOM 513 CD1 LEU A 67 3.905 0.814 3.203 1.00 0.00 C
|
| 515 |
+
ATOM 514 CD2 LEU A 67 2.666 2.950 2.751 1.00 0.00 C
|
| 516 |
+
ATOM 515 N ASP A 68 0.501 3.397 7.116 1.00 0.00 N
|
| 517 |
+
ATOM 516 CA ASP A 68 -0.273 2.858 8.231 1.00 0.00 C
|
| 518 |
+
ATOM 517 C ASP A 68 -0.674 1.409 7.970 1.00 0.00 C
|
| 519 |
+
ATOM 518 CB ASP A 68 -1.519 3.712 8.480 1.00 0.00 C
|
| 520 |
+
ATOM 519 O ASP A 68 -0.259 0.813 6.973 1.00 0.00 O
|
| 521 |
+
ATOM 520 CG ASP A 68 -2.476 3.724 7.301 1.00 0.00 C
|
| 522 |
+
ATOM 521 OD1 ASP A 68 -2.496 2.746 6.522 1.00 0.00 O
|
| 523 |
+
ATOM 522 OD2 ASP A 68 -3.215 4.721 7.148 1.00 0.00 O
|
| 524 |
+
ATOM 523 N ASP A 69 -1.509 0.840 8.811 1.00 0.00 N
|
| 525 |
+
ATOM 524 CA ASP A 69 -1.790 -0.589 8.721 1.00 0.00 C
|
| 526 |
+
ATOM 525 C ASP A 69 -2.617 -0.910 7.477 1.00 0.00 C
|
| 527 |
+
ATOM 526 CB ASP A 69 -2.519 -1.073 9.976 1.00 0.00 C
|
| 528 |
+
ATOM 527 O ASP A 69 -2.432 -1.958 6.855 1.00 0.00 O
|
| 529 |
+
ATOM 528 CG ASP A 69 -3.801 -0.305 10.250 1.00 0.00 C
|
| 530 |
+
ATOM 529 OD1 ASP A 69 -3.942 0.839 9.766 1.00 0.00 O
|
| 531 |
+
ATOM 530 OD2 ASP A 69 -4.676 -0.848 10.957 1.00 0.00 O
|
| 532 |
+
ATOM 531 N GLU A 70 -3.487 -0.023 7.030 1.00 0.00 N
|
| 533 |
+
ATOM 532 CA GLU A 70 -4.272 -0.263 5.823 1.00 0.00 C
|
| 534 |
+
ATOM 533 C GLU A 70 -3.408 -0.147 4.570 1.00 0.00 C
|
| 535 |
+
ATOM 534 CB GLU A 70 -5.448 0.712 5.744 1.00 0.00 C
|
| 536 |
+
ATOM 535 O GLU A 70 -3.520 -0.965 3.655 1.00 0.00 O
|
| 537 |
+
ATOM 536 CG GLU A 70 -6.479 0.525 6.847 1.00 0.00 C
|
| 538 |
+
ATOM 537 CD GLU A 70 -7.640 1.504 6.756 1.00 0.00 C
|
| 539 |
+
ATOM 538 OE1 GLU A 70 -7.507 2.541 6.068 1.00 0.00 O
|
| 540 |
+
ATOM 539 OE2 GLU A 70 -8.690 1.230 7.379 1.00 0.00 O
|
| 541 |
+
ATOM 540 N GLU A 71 -2.499 0.861 4.574 1.00 0.00 N
|
| 542 |
+
ATOM 541 CA GLU A 71 -1.586 1.028 3.448 1.00 0.00 C
|
| 543 |
+
ATOM 542 C GLU A 71 -0.583 -0.119 3.376 1.00 0.00 C
|
| 544 |
+
ATOM 543 CB GLU A 71 -0.848 2.367 3.547 1.00 0.00 C
|
| 545 |
+
ATOM 544 O GLU A 71 -0.231 -0.576 2.286 1.00 0.00 O
|
| 546 |
+
ATOM 545 CG GLU A 71 -1.730 3.577 3.276 1.00 0.00 C
|
| 547 |
+
ATOM 546 CD GLU A 71 -1.008 4.900 3.464 1.00 0.00 C
|
| 548 |
+
ATOM 547 OE1 GLU A 71 -0.136 4.994 4.357 1.00 0.00 O
|
| 549 |
+
ATOM 548 OE2 GLU A 71 -1.316 5.852 2.713 1.00 0.00 O
|
| 550 |
+
ATOM 549 N PHE A 72 -0.177 -0.597 4.522 1.00 0.00 N
|
| 551 |
+
ATOM 550 CA PHE A 72 0.719 -1.746 4.556 1.00 0.00 C
|
| 552 |
+
ATOM 551 C PHE A 72 0.023 -2.991 4.018 1.00 0.00 C
|
| 553 |
+
ATOM 552 CB PHE A 72 1.217 -1.998 5.983 1.00 0.00 C
|
| 554 |
+
ATOM 553 O PHE A 72 0.622 -3.771 3.275 1.00 0.00 O
|
| 555 |
+
ATOM 554 CG PHE A 72 2.152 -3.172 6.101 1.00 0.00 C
|
| 556 |
+
ATOM 555 CD1 PHE A 72 3.471 -3.074 5.678 1.00 0.00 C
|
| 557 |
+
ATOM 556 CD2 PHE A 72 1.709 -4.376 6.635 1.00 0.00 C
|
| 558 |
+
ATOM 557 CE1 PHE A 72 4.338 -4.159 5.787 1.00 0.00 C
|
| 559 |
+
ATOM 558 CE2 PHE A 72 2.569 -5.464 6.746 1.00 0.00 C
|
| 560 |
+
ATOM 559 CZ PHE A 72 3.883 -5.354 6.320 1.00 0.00 C
|
| 561 |
+
ATOM 560 N ALA A 73 -1.247 -3.167 4.374 1.00 0.00 N
|
| 562 |
+
ATOM 561 CA ALA A 73 -2.022 -4.289 3.852 1.00 0.00 C
|
| 563 |
+
ATOM 562 C ALA A 73 -2.172 -4.193 2.336 1.00 0.00 C
|
| 564 |
+
ATOM 563 CB ALA A 73 -3.395 -4.344 4.516 1.00 0.00 C
|
| 565 |
+
ATOM 564 O ALA A 73 -2.052 -5.196 1.629 1.00 0.00 O
|
| 566 |
+
ATOM 565 N LEU A 74 -2.379 -3.016 1.863 1.00 0.00 N
|
| 567 |
+
ATOM 566 CA LEU A 74 -2.465 -2.790 0.425 1.00 0.00 C
|
| 568 |
+
ATOM 567 C LEU A 74 -1.146 -3.133 -0.259 1.00 0.00 C
|
| 569 |
+
ATOM 568 CB LEU A 74 -2.841 -1.335 0.132 1.00 0.00 C
|
| 570 |
+
ATOM 569 O LEU A 74 -1.136 -3.800 -1.297 1.00 0.00 O
|
| 571 |
+
ATOM 570 CG LEU A 74 -2.819 -0.912 -1.338 1.00 0.00 C
|
| 572 |
+
ATOM 571 CD1 LEU A 74 -3.774 -1.777 -2.153 1.00 0.00 C
|
| 573 |
+
ATOM 572 CD2 LEU A 74 -3.177 0.565 -1.474 1.00 0.00 C
|
| 574 |
+
ATOM 573 N ALA A 75 -0.046 -2.688 0.275 1.00 0.00 N
|
| 575 |
+
ATOM 574 CA ALA A 75 1.259 -3.010 -0.296 1.00 0.00 C
|
| 576 |
+
ATOM 575 C ALA A 75 1.441 -4.520 -0.431 1.00 0.00 C
|
| 577 |
+
ATOM 576 CB ALA A 75 2.376 -2.416 0.557 1.00 0.00 C
|
| 578 |
+
ATOM 577 O ALA A 75 1.866 -5.009 -1.479 1.00 0.00 O
|
| 579 |
+
ATOM 578 N ASN A 76 1.079 -5.248 0.595 1.00 0.00 N
|
| 580 |
+
ATOM 579 CA ASN A 76 1.236 -6.698 0.586 1.00 0.00 C
|
| 581 |
+
ATOM 580 C ASN A 76 0.288 -7.358 -0.413 1.00 0.00 C
|
| 582 |
+
ATOM 581 CB ASN A 76 1.014 -7.271 1.987 1.00 0.00 C
|
| 583 |
+
ATOM 582 O ASN A 76 0.648 -8.345 -1.056 1.00 0.00 O
|
| 584 |
+
ATOM 583 CG ASN A 76 2.231 -7.123 2.878 1.00 0.00 C
|
| 585 |
+
ATOM 584 ND2 ASN A 76 2.133 -6.254 3.876 1.00 0.00 N
|
| 586 |
+
ATOM 585 OD1 ASN A 76 3.252 -7.784 2.670 1.00 0.00 O
|
| 587 |
+
ATOM 586 N HIS A 77 -0.879 -6.819 -0.497 1.00 0.00 N
|
| 588 |
+
ATOM 587 CA HIS A 77 -1.809 -7.319 -1.503 1.00 0.00 C
|
| 589 |
+
ATOM 588 C HIS A 77 -1.245 -7.149 -2.909 1.00 0.00 C
|
| 590 |
+
ATOM 589 CB HIS A 77 -3.158 -6.605 -1.389 1.00 0.00 C
|
| 591 |
+
ATOM 590 O HIS A 77 -1.331 -8.064 -3.732 1.00 0.00 O
|
| 592 |
+
ATOM 591 CG HIS A 77 -4.164 -7.056 -2.400 1.00 0.00 C
|
| 593 |
+
ATOM 592 CD2 HIS A 77 -4.487 -6.555 -3.615 1.00 0.00 C
|
| 594 |
+
ATOM 593 ND1 HIS A 77 -4.978 -8.150 -2.203 1.00 0.00 N
|
| 595 |
+
ATOM 594 CE1 HIS A 77 -5.760 -8.305 -3.258 1.00 0.00 C
|
| 596 |
+
ATOM 595 NE2 HIS A 77 -5.482 -7.350 -4.129 1.00 0.00 N
|
| 597 |
+
ATOM 596 N LEU A 78 -0.694 -5.989 -3.195 1.00 0.00 N
|
| 598 |
+
ATOM 597 CA LEU A 78 -0.121 -5.717 -4.509 1.00 0.00 C
|
| 599 |
+
ATOM 598 C LEU A 78 1.083 -6.614 -4.774 1.00 0.00 C
|
| 600 |
+
ATOM 599 CB LEU A 78 0.290 -4.247 -4.620 1.00 0.00 C
|
| 601 |
+
ATOM 600 O LEU A 78 1.285 -7.073 -5.901 1.00 0.00 O
|
| 602 |
+
ATOM 601 CG LEU A 78 -0.848 -3.224 -4.637 1.00 0.00 C
|
| 603 |
+
ATOM 602 CD1 LEU A 78 -0.287 -1.807 -4.583 1.00 0.00 C
|
| 604 |
+
ATOM 603 CD2 LEU A 78 -1.718 -3.413 -5.875 1.00 0.00 C
|
| 605 |
+
ATOM 604 N ILE A 79 1.868 -6.880 -3.774 1.00 0.00 N
|
| 606 |
+
ATOM 605 CA ILE A 79 2.968 -7.831 -3.898 1.00 0.00 C
|
| 607 |
+
ATOM 606 C ILE A 79 2.423 -9.203 -4.285 1.00 0.00 C
|
| 608 |
+
ATOM 607 CB ILE A 79 3.782 -7.928 -2.588 1.00 0.00 C
|
| 609 |
+
ATOM 608 O ILE A 79 2.935 -9.845 -5.205 1.00 0.00 O
|
| 610 |
+
ATOM 609 CG1 ILE A 79 4.635 -6.669 -2.395 1.00 0.00 C
|
| 611 |
+
ATOM 610 CG2 ILE A 79 4.655 -9.186 -2.586 1.00 0.00 C
|
| 612 |
+
ATOM 611 CD1 ILE A 79 5.252 -6.546 -1.008 1.00 0.00 C
|
| 613 |
+
ATOM 612 N LYS A 80 1.382 -9.652 -3.601 1.00 0.00 N
|
| 614 |
+
ATOM 613 CA LYS A 80 0.775 -10.948 -3.889 1.00 0.00 C
|
| 615 |
+
ATOM 614 C LYS A 80 0.252 -11.005 -5.320 1.00 0.00 C
|
| 616 |
+
ATOM 615 CB LYS A 80 -0.358 -11.241 -2.904 1.00 0.00 C
|
| 617 |
+
ATOM 616 O LYS A 80 0.458 -11.996 -6.024 1.00 0.00 O
|
| 618 |
+
ATOM 617 CG LYS A 80 -1.007 -12.603 -3.095 1.00 0.00 C
|
| 619 |
+
ATOM 618 CD LYS A 80 -2.071 -12.869 -2.038 1.00 0.00 C
|
| 620 |
+
ATOM 619 CE LYS A 80 -2.782 -14.194 -2.279 1.00 0.00 C
|
| 621 |
+
ATOM 620 NZ LYS A 80 -3.870 -14.429 -1.281 1.00 0.00 N
|
| 622 |
+
ATOM 621 N VAL A 81 -0.374 -9.972 -5.758 1.00 0.00 N
|
| 623 |
+
ATOM 622 CA VAL A 81 -0.925 -9.895 -7.107 1.00 0.00 C
|
| 624 |
+
ATOM 623 C VAL A 81 0.203 -9.991 -8.132 1.00 0.00 C
|
| 625 |
+
ATOM 624 CB VAL A 81 -1.726 -8.591 -7.318 1.00 0.00 C
|
| 626 |
+
ATOM 625 O VAL A 81 0.090 -10.717 -9.123 1.00 0.00 O
|
| 627 |
+
ATOM 626 CG1 VAL A 81 -1.998 -8.358 -8.803 1.00 0.00 C
|
| 628 |
+
ATOM 627 CG2 VAL A 81 -3.037 -8.639 -6.534 1.00 0.00 C
|
| 629 |
+
ATOM 628 N LYS A 82 1.246 -9.256 -7.845 1.00 0.00 N
|
| 630 |
+
ATOM 629 CA LYS A 82 2.382 -9.286 -8.763 1.00 0.00 C
|
| 631 |
+
ATOM 630 C LYS A 82 3.030 -10.667 -8.790 1.00 0.00 C
|
| 632 |
+
ATOM 631 CB LYS A 82 3.415 -8.229 -8.373 1.00 0.00 C
|
| 633 |
+
ATOM 632 O LYS A 82 3.384 -11.172 -9.857 1.00 0.00 O
|
| 634 |
+
ATOM 633 CG LYS A 82 4.587 -8.124 -9.338 1.00 0.00 C
|
| 635 |
+
ATOM 634 CD LYS A 82 4.121 -7.808 -10.753 1.00 0.00 C
|
| 636 |
+
ATOM 635 CE LYS A 82 5.296 -7.646 -11.706 1.00 0.00 C
|
| 637 |
+
ATOM 636 NZ LYS A 82 4.850 -7.594 -13.131 1.00 0.00 N
|
| 638 |
+
ATOM 637 N LEU A 83 3.205 -11.323 -7.667 1.00 0.00 N
|
| 639 |
+
ATOM 638 CA LEU A 83 3.794 -12.655 -7.585 1.00 0.00 C
|
| 640 |
+
ATOM 639 C LEU A 83 2.927 -13.678 -8.313 1.00 0.00 C
|
| 641 |
+
ATOM 640 CB LEU A 83 3.977 -13.072 -6.124 1.00 0.00 C
|
| 642 |
+
ATOM 641 O LEU A 83 3.437 -14.679 -8.824 1.00 0.00 O
|
| 643 |
+
ATOM 642 CG LEU A 83 5.101 -12.374 -5.356 1.00 0.00 C
|
| 644 |
+
ATOM 643 CD1 LEU A 83 5.017 -12.711 -3.871 1.00 0.00 C
|
| 645 |
+
ATOM 644 CD2 LEU A 83 6.461 -12.768 -5.922 1.00 0.00 C
|
| 646 |
+
ATOM 645 N GLU A 84 1.620 -13.461 -8.408 1.00 0.00 N
|
| 647 |
+
ATOM 646 CA GLU A 84 0.706 -14.361 -9.107 1.00 0.00 C
|
| 648 |
+
ATOM 647 C GLU A 84 0.746 -14.126 -10.615 1.00 0.00 C
|
| 649 |
+
ATOM 648 CB GLU A 84 -0.722 -14.188 -8.585 1.00 0.00 C
|
| 650 |
+
ATOM 649 O GLU A 84 0.047 -14.802 -11.371 1.00 0.00 O
|
| 651 |
+
ATOM 650 CG GLU A 84 -0.929 -14.716 -7.173 1.00 0.00 C
|
| 652 |
+
ATOM 651 CD GLU A 84 -2.302 -14.390 -6.607 1.00 0.00 C
|
| 653 |
+
ATOM 652 OE1 GLU A 84 -3.071 -13.652 -7.263 1.00 0.00 O
|
| 654 |
+
ATOM 653 OE2 GLU A 84 -2.611 -14.877 -5.496 1.00 0.00 O
|
| 655 |
+
ATOM 654 N GLY A 85 1.500 -13.133 -11.014 1.00 0.00 N
|
| 656 |
+
ATOM 655 CA GLY A 85 1.735 -12.949 -12.437 1.00 0.00 C
|
| 657 |
+
ATOM 656 C GLY A 85 0.872 -11.862 -13.050 1.00 0.00 C
|
| 658 |
+
ATOM 657 O GLY A 85 0.849 -11.695 -14.270 1.00 0.00 O
|
| 659 |
+
ATOM 658 N HIS A 86 0.223 -11.125 -12.228 1.00 0.00 N
|
| 660 |
+
ATOM 659 CA HIS A 86 -0.643 -10.067 -12.736 1.00 0.00 C
|
| 661 |
+
ATOM 660 C HIS A 86 0.087 -8.729 -12.774 1.00 0.00 C
|
| 662 |
+
ATOM 661 CB HIS A 86 -1.905 -9.952 -11.880 1.00 0.00 C
|
| 663 |
+
ATOM 662 O HIS A 86 1.060 -8.526 -12.044 1.00 0.00 O
|
| 664 |
+
ATOM 663 CG HIS A 86 -2.700 -11.216 -11.809 1.00 0.00 C
|
| 665 |
+
ATOM 664 CD2 HIS A 86 -2.828 -12.133 -10.820 1.00 0.00 C
|
| 666 |
+
ATOM 665 ND1 HIS A 86 -3.485 -11.661 -12.851 1.00 0.00 N
|
| 667 |
+
ATOM 666 CE1 HIS A 86 -4.063 -12.799 -12.505 1.00 0.00 C
|
| 668 |
+
ATOM 667 NE2 HIS A 86 -3.681 -13.107 -11.278 1.00 0.00 N
|
| 669 |
+
ATOM 668 N GLU A 87 -0.391 -7.843 -13.594 1.00 0.00 N
|
| 670 |
+
ATOM 669 CA GLU A 87 0.198 -6.511 -13.698 1.00 0.00 C
|
| 671 |
+
ATOM 670 C GLU A 87 -0.334 -5.586 -12.608 1.00 0.00 C
|
| 672 |
+
ATOM 671 CB GLU A 87 -0.075 -5.909 -15.079 1.00 0.00 C
|
| 673 |
+
ATOM 672 O GLU A 87 -1.490 -5.703 -12.197 1.00 0.00 O
|
| 674 |
+
ATOM 673 CG GLU A 87 0.640 -6.627 -16.215 1.00 0.00 C
|
| 675 |
+
ATOM 674 CD GLU A 87 2.155 -6.532 -16.126 1.00 0.00 C
|
| 676 |
+
ATOM 675 OE1 GLU A 87 2.679 -5.427 -15.865 1.00 0.00 O
|
| 677 |
+
ATOM 676 OE2 GLU A 87 2.821 -7.573 -16.321 1.00 0.00 O
|
| 678 |
+
ATOM 677 N LEU A 88 0.523 -4.768 -12.151 1.00 0.00 N
|
| 679 |
+
ATOM 678 CA LEU A 88 0.095 -3.718 -11.234 1.00 0.00 C
|
| 680 |
+
ATOM 679 C LEU A 88 -0.688 -2.637 -11.971 1.00 0.00 C
|
| 681 |
+
ATOM 680 CB LEU A 88 1.305 -3.097 -10.530 1.00 0.00 C
|
| 682 |
+
ATOM 681 O LEU A 88 -0.397 -2.334 -13.130 1.00 0.00 O
|
| 683 |
+
ATOM 682 CG LEU A 88 2.099 -4.020 -9.605 1.00 0.00 C
|
| 684 |
+
ATOM 683 CD1 LEU A 88 3.392 -3.345 -9.164 1.00 0.00 C
|
| 685 |
+
ATOM 684 CD2 LEU A 88 1.257 -4.417 -8.396 1.00 0.00 C
|
| 686 |
+
ATOM 685 N PRO A 89 -1.723 -2.108 -11.394 1.00 0.00 N
|
| 687 |
+
ATOM 686 CA PRO A 89 -2.414 -0.985 -12.032 1.00 0.00 C
|
| 688 |
+
ATOM 687 C PRO A 89 -1.557 0.278 -12.089 1.00 0.00 C
|
| 689 |
+
ATOM 688 CB PRO A 89 -3.641 -0.773 -11.141 1.00 0.00 C
|
| 690 |
+
ATOM 689 O PRO A 89 -0.657 0.456 -11.265 1.00 0.00 O
|
| 691 |
+
ATOM 690 CG PRO A 89 -3.202 -1.206 -9.779 1.00 0.00 C
|
| 692 |
+
ATOM 691 CD PRO A 89 -2.232 -2.343 -9.929 1.00 0.00 C
|
| 693 |
+
ATOM 692 N ALA A 90 -1.805 1.171 -13.093 1.00 0.00 N
|
| 694 |
+
ATOM 693 CA ALA A 90 -1.133 2.465 -13.169 1.00 0.00 C
|
| 695 |
+
ATOM 694 C ALA A 90 -1.593 3.389 -12.046 1.00 0.00 C
|
| 696 |
+
ATOM 695 CB ALA A 90 -1.384 3.117 -14.527 1.00 0.00 C
|
| 697 |
+
ATOM 696 O ALA A 90 -0.797 4.154 -11.497 1.00 0.00 O
|
| 698 |
+
ATOM 697 N ASP A 91 -2.875 3.347 -11.688 1.00 0.00 N
|
| 699 |
+
ATOM 698 CA ASP A 91 -3.509 4.070 -10.590 1.00 0.00 C
|
| 700 |
+
ATOM 699 C ASP A 91 -4.390 3.142 -9.757 1.00 0.00 C
|
| 701 |
+
ATOM 700 CB ASP A 91 -4.337 5.241 -11.124 1.00 0.00 C
|
| 702 |
+
ATOM 701 O ASP A 91 -4.974 2.192 -10.285 1.00 0.00 O
|
| 703 |
+
ATOM 702 CG ASP A 91 -3.496 6.284 -11.838 1.00 0.00 C
|
| 704 |
+
ATOM 703 OD1 ASP A 91 -2.575 6.856 -11.216 1.00 0.00 O
|
| 705 |
+
ATOM 704 OD2 ASP A 91 -3.759 6.539 -13.034 1.00 0.00 O
|
| 706 |
+
ATOM 705 N LEU A 92 -4.475 3.495 -8.559 1.00 0.00 N
|
| 707 |
+
ATOM 706 CA LEU A 92 -5.212 2.626 -7.649 1.00 0.00 C
|
| 708 |
+
ATOM 707 C LEU A 92 -6.709 2.684 -7.935 1.00 0.00 C
|
| 709 |
+
ATOM 708 CB LEU A 92 -4.942 3.020 -6.195 1.00 0.00 C
|
| 710 |
+
ATOM 709 O LEU A 92 -7.324 3.749 -7.833 1.00 0.00 O
|
| 711 |
+
ATOM 710 CG LEU A 92 -5.332 1.993 -5.130 1.00 0.00 C
|
| 712 |
+
ATOM 711 CD1 LEU A 92 -4.474 0.740 -5.264 1.00 0.00 C
|
| 713 |
+
ATOM 712 CD2 LEU A 92 -5.198 2.593 -3.735 1.00 0.00 C
|
| 714 |
+
ATOM 713 N PRO A 93 -7.307 1.542 -8.400 1.00 0.00 N
|
| 715 |
+
ATOM 714 CA PRO A 93 -8.765 1.529 -8.541 1.00 0.00 C
|
| 716 |
+
ATOM 715 C PRO A 93 -9.487 1.708 -7.207 1.00 0.00 C
|
| 717 |
+
ATOM 716 CB PRO A 93 -9.051 0.147 -9.135 1.00 0.00 C
|
| 718 |
+
ATOM 717 O PRO A 93 -8.938 1.373 -6.154 1.00 0.00 O
|
| 719 |
+
ATOM 718 CG PRO A 93 -7.876 -0.689 -8.740 1.00 0.00 C
|
| 720 |
+
ATOM 719 CD PRO A 93 -6.688 0.212 -8.558 1.00 0.00 C
|
| 721 |
+
ATOM 720 N PRO A 94 -10.718 2.191 -7.191 1.00 0.00 N
|
| 722 |
+
ATOM 721 CA PRO A 94 -11.470 2.526 -5.980 1.00 0.00 C
|
| 723 |
+
ATOM 722 C PRO A 94 -11.579 1.353 -5.009 1.00 0.00 C
|
| 724 |
+
ATOM 723 CB PRO A 94 -12.848 2.920 -6.518 1.00 0.00 C
|
| 725 |
+
ATOM 724 O PRO A 94 -11.529 1.547 -3.792 1.00 0.00 O
|
| 726 |
+
ATOM 725 CG PRO A 94 -12.578 3.514 -7.862 1.00 0.00 C
|
| 727 |
+
ATOM 726 CD PRO A 94 -11.427 2.779 -8.487 1.00 0.00 C
|
| 728 |
+
ATOM 727 N HIS A 95 -11.641 0.126 -5.442 1.00 0.00 N
|
| 729 |
+
ATOM 728 CA HIS A 95 -11.841 -1.018 -4.558 1.00 0.00 C
|
| 730 |
+
ATOM 729 C HIS A 95 -10.550 -1.385 -3.832 1.00 0.00 C
|
| 731 |
+
ATOM 730 CB HIS A 95 -12.360 -2.221 -5.347 1.00 0.00 C
|
| 732 |
+
ATOM 731 O HIS A 95 -10.569 -2.180 -2.889 1.00 0.00 O
|
| 733 |
+
ATOM 732 CG HIS A 95 -11.413 -2.700 -6.402 1.00 0.00 C
|
| 734 |
+
ATOM 733 CD2 HIS A 95 -10.451 -3.651 -6.367 1.00 0.00 C
|
| 735 |
+
ATOM 734 ND1 HIS A 95 -11.395 -2.178 -7.678 1.00 0.00 N
|
| 736 |
+
ATOM 735 CE1 HIS A 95 -10.460 -2.791 -8.384 1.00 0.00 C
|
| 737 |
+
ATOM 736 NE2 HIS A 95 -9.872 -3.689 -7.611 1.00 0.00 N
|
| 738 |
+
ATOM 737 N LEU A 96 -9.473 -0.767 -4.284 1.00 0.00 N
|
| 739 |
+
ATOM 738 CA LEU A 96 -8.217 -1.042 -3.594 1.00 0.00 C
|
| 740 |
+
ATOM 739 C LEU A 96 -7.867 0.088 -2.632 1.00 0.00 C
|
| 741 |
+
ATOM 740 CB LEU A 96 -7.083 -1.239 -4.604 1.00 0.00 C
|
| 742 |
+
ATOM 741 O LEU A 96 -6.981 -0.062 -1.787 1.00 0.00 O
|
| 743 |
+
ATOM 742 CG LEU A 96 -7.099 -2.547 -5.395 1.00 0.00 C
|
| 744 |
+
ATOM 743 CD1 LEU A 96 -5.934 -2.586 -6.379 1.00 0.00 C
|
| 745 |
+
ATOM 744 CD2 LEU A 96 -7.049 -3.744 -4.451 1.00 0.00 C
|
| 746 |
+
ATOM 745 N VAL A 97 -8.574 1.248 -2.777 1.00 0.00 N
|
| 747 |
+
ATOM 746 CA VAL A 97 -8.292 2.375 -1.894 1.00 0.00 C
|
| 748 |
+
ATOM 747 C VAL A 97 -8.741 2.042 -0.473 1.00 0.00 C
|
| 749 |
+
ATOM 748 CB VAL A 97 -8.985 3.666 -2.383 1.00 0.00 C
|
| 750 |
+
ATOM 749 O VAL A 97 -9.900 1.685 -0.248 1.00 0.00 O
|
| 751 |
+
ATOM 750 CG1 VAL A 97 -8.708 4.824 -1.424 1.00 0.00 C
|
| 752 |
+
ATOM 751 CG2 VAL A 97 -8.521 4.017 -3.796 1.00 0.00 C
|
| 753 |
+
ATOM 752 N PRO A 98 -7.798 2.153 0.460 1.00 0.00 N
|
| 754 |
+
ATOM 753 CA PRO A 98 -8.187 1.905 1.851 1.00 0.00 C
|
| 755 |
+
ATOM 754 C PRO A 98 -9.340 2.795 2.308 1.00 0.00 C
|
| 756 |
+
ATOM 755 CB PRO A 98 -6.911 2.218 2.635 1.00 0.00 C
|
| 757 |
+
ATOM 756 O PRO A 98 -9.406 3.969 1.933 1.00 0.00 O
|
| 758 |
+
ATOM 757 CG PRO A 98 -5.799 1.989 1.663 1.00 0.00 C
|
| 759 |
+
ATOM 758 CD PRO A 98 -6.266 2.406 0.298 1.00 0.00 C
|
| 760 |
+
ATOM 759 N PRO A 99 -10.218 2.224 3.110 1.00 0.00 N
|
| 761 |
+
ATOM 760 CA PRO A 99 -11.392 2.993 3.527 1.00 0.00 C
|
| 762 |
+
ATOM 761 C PRO A 99 -11.025 4.306 4.216 1.00 0.00 C
|
| 763 |
+
ATOM 762 CB PRO A 99 -12.107 2.048 4.497 1.00 0.00 C
|
| 764 |
+
ATOM 763 O PRO A 99 -11.682 5.326 4.001 1.00 0.00 O
|
| 765 |
+
ATOM 764 CG PRO A 99 -11.733 0.677 4.037 1.00 0.00 C
|
| 766 |
+
ATOM 765 CD PRO A 99 -10.323 0.712 3.525 1.00 0.00 C
|
| 767 |
+
ATOM 766 N SER A 100 -10.010 4.314 5.010 1.00 0.00 N
|
| 768 |
+
ATOM 767 CA SER A 100 -9.618 5.508 5.750 1.00 0.00 C
|
| 769 |
+
ATOM 768 C SER A 100 -9.137 6.608 4.809 1.00 0.00 C
|
| 770 |
+
ATOM 769 CB SER A 100 -8.520 5.175 6.762 1.00 0.00 C
|
| 771 |
+
ATOM 770 O SER A 100 -9.029 7.770 5.208 1.00 0.00 O
|
| 772 |
+
ATOM 771 OG SER A 100 -7.330 4.782 6.101 1.00 0.00 O
|
| 773 |
+
ATOM 772 N LYS A 101 -8.834 6.212 3.542 1.00 0.00 N
|
| 774 |
+
ATOM 773 CA LYS A 101 -8.284 7.180 2.598 1.00 0.00 C
|
| 775 |
+
ATOM 774 C LYS A 101 -9.312 7.561 1.537 1.00 0.00 C
|
| 776 |
+
ATOM 775 CB LYS A 101 -7.024 6.625 1.932 1.00 0.00 C
|
| 777 |
+
ATOM 776 O LYS A 101 -9.024 8.359 0.643 1.00 0.00 O
|
| 778 |
+
ATOM 777 CG LYS A 101 -5.976 6.120 2.913 1.00 0.00 C
|
| 779 |
+
ATOM 778 CD LYS A 101 -5.504 7.229 3.845 1.00 0.00 C
|
| 780 |
+
ATOM 779 CE LYS A 101 -4.432 6.735 4.807 1.00 0.00 C
|
| 781 |
+
ATOM 780 NZ LYS A 101 -4.004 7.804 5.758 1.00 0.00 N
|
| 782 |
+
ATOM 781 N ARG A 102 -10.443 6.970 1.629 1.00 0.00 N
|
| 783 |
+
ATOM 782 CA ARG A 102 -11.466 7.303 0.644 1.00 0.00 C
|
| 784 |
+
ATOM 783 C ARG A 102 -12.050 8.687 0.907 1.00 0.00 C
|
| 785 |
+
ATOM 784 CB ARG A 102 -12.581 6.254 0.650 1.00 0.00 C
|
| 786 |
+
ATOM 785 O ARG A 102 -12.157 9.113 2.059 1.00 0.00 O
|
| 787 |
+
ATOM 786 CG ARG A 102 -12.134 4.877 0.185 1.00 0.00 C
|
| 788 |
+
ATOM 787 CD ARG A 102 -13.275 3.871 0.225 1.00 0.00 C
|
| 789 |
+
ATOM 788 NE ARG A 102 -12.807 2.514 -0.045 1.00 0.00 N
|
| 790 |
+
ATOM 789 NH1 ARG A 102 -14.757 1.484 0.640 1.00 0.00 N
|
| 791 |
+
ATOM 790 NH2 ARG A 102 -12.998 0.227 -0.122 1.00 0.00 N
|
| 792 |
+
ATOM 791 CZ ARG A 102 -13.522 1.411 0.158 1.00 0.00 C
|
| 793 |
+
ATOM 792 N ARG A 103 -12.077 9.501 -0.053 1.00 0.00 N
|
| 794 |
+
ATOM 793 CA ARG A 103 -12.675 10.828 0.049 1.00 0.00 C
|
| 795 |
+
ATOM 794 C ARG A 103 -14.192 10.737 0.168 1.00 0.00 C
|
| 796 |
+
ATOM 795 CB ARG A 103 -12.296 11.683 -1.162 1.00 0.00 C
|
| 797 |
+
ATOM 796 O ARG A 103 -14.823 9.906 -0.488 1.00 0.00 O
|
| 798 |
+
ATOM 797 CG ARG A 103 -10.812 12.000 -1.252 1.00 0.00 C
|
| 799 |
+
ATOM 798 CD ARG A 103 -10.500 12.921 -2.424 1.00 0.00 C
|
| 800 |
+
ATOM 799 NE ARG A 103 -9.065 13.145 -2.568 1.00 0.00 N
|
| 801 |
+
ATOM 800 NH1 ARG A 103 -9.265 14.652 -4.306 1.00 0.00 N
|
| 802 |
+
ATOM 801 NH2 ARG A 103 -7.193 14.092 -3.502 1.00 0.00 N
|
| 803 |
+
ATOM 802 CZ ARG A 103 -8.510 13.963 -3.458 1.00 0.00 C
|
| 804 |
+
ATOM 803 N HIS A 104 -14.785 11.236 1.296 1.00 0.00 N
|
| 805 |
+
ATOM 804 CA HIS A 104 -16.219 11.428 1.485 1.00 0.00 C
|
| 806 |
+
ATOM 805 C HIS A 104 -16.724 12.626 0.690 1.00 0.00 C
|
| 807 |
+
ATOM 806 CB HIS A 104 -16.543 11.608 2.969 1.00 0.00 C
|
| 808 |
+
ATOM 807 O HIS A 104 -16.080 13.678 0.665 1.00 0.00 O
|
| 809 |
+
ATOM 808 CG HIS A 104 -16.187 10.423 3.809 1.00 0.00 C
|
| 810 |
+
ATOM 809 CD2 HIS A 104 -15.202 10.243 4.721 1.00 0.00 C
|
| 811 |
+
ATOM 810 ND1 HIS A 104 -16.885 9.236 3.758 1.00 0.00 N
|
| 812 |
+
ATOM 811 CE1 HIS A 104 -16.344 8.377 4.603 1.00 0.00 C
|
| 813 |
+
ATOM 812 NE2 HIS A 104 -15.321 8.963 5.201 1.00 0.00 N
|
| 814 |
+
ATOM 813 N GLU A 105 -17.168 12.369 -0.539 1.00 0.00 N
|
| 815 |
+
ATOM 814 CA GLU A 105 -17.902 13.520 -1.056 1.00 0.00 C
|
| 816 |
+
ATOM 815 C GLU A 105 -19.103 13.851 -0.175 1.00 0.00 C
|
| 817 |
+
ATOM 816 CB GLU A 105 -18.361 13.262 -2.495 1.00 0.00 C
|
| 818 |
+
ATOM 817 O GLU A 105 -19.759 12.951 0.353 1.00 0.00 O
|
| 819 |
+
ATOM 818 CG GLU A 105 -17.238 13.327 -3.519 1.00 0.00 C
|
| 820 |
+
ATOM 819 CD GLU A 105 -17.717 13.123 -4.947 1.00 0.00 C
|
| 821 |
+
ATOM 820 OE1 GLU A 105 -18.922 12.848 -5.151 1.00 0.00 O
|
| 822 |
+
ATOM 821 OE2 GLU A 105 -16.880 13.239 -5.871 1.00 0.00 O
|
| 823 |
+
ATOM 822 OXT GLU A 105 -18.868 15.014 -0.409 1.00 0.00 O
|
| 824 |
+
TER 823 GLU A 105
|
| 825 |
+
END
|
2kff/2kff_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2oxd/2oxd_ligand.mol2
ADDED
|
@@ -0,0 +1,49 @@
|
|
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|
|
|
|
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|
|
|
|
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|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:56 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2oxd_ligand
|
| 7 |
+
16 17 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 BR1 20.8110 6.8790 22.6790 Br 1 K32 -0.0612
|
| 14 |
+
2 C5 21.2880 7.4110 20.9220 C.ar 1 K32 0.0350
|
| 15 |
+
3 C2 20.6760 8.5010 20.2990 C.ar 1 K32 0.0051
|
| 16 |
+
4 BR2 19.3420 9.4560 21.2260 Br 1 K32 -0.0614
|
| 17 |
+
5 C7 22.2620 6.6750 20.2730 C.ar 1 K32 0.1096
|
| 18 |
+
6 N14 22.9720 5.6030 20.6600 N.am 1 K32 -0.2145
|
| 19 |
+
7 C13 23.7530 5.3520 19.6020 C.2 1 K32 0.3118
|
| 20 |
+
8 O10 24.5850 4.3650 19.6250 O.2 1 K32 -0.3928
|
| 21 |
+
9 N6 23.6080 6.1890 18.5520 N.am 1 K32 -0.2145
|
| 22 |
+
10 C8 22.6460 7.0410 18.9780 C.ar 1 K32 0.1096
|
| 23 |
+
11 C4 22.0190 8.1310 18.3790 C.ar 1 K32 0.0350
|
| 24 |
+
12 BR3 22.5890 8.5760 16.6590 Br 1 K32 -0.0612
|
| 25 |
+
13 C3 21.0250 8.8860 19.0070 C.ar 1 K32 0.0051
|
| 26 |
+
14 BR4 20.1640 10.3830 18.1410 Br 1 K32 -0.0614
|
| 27 |
+
15 H1 22.9280 5.1106 21.5293 H 1 K32 0.2279
|
| 28 |
+
16 H2 24.0915 6.1813 17.6767 H 1 K32 0.2279
|
| 29 |
+
@<TRIPOS>BOND
|
| 30 |
+
1 1 2 1
|
| 31 |
+
2 2 3 ar
|
| 32 |
+
3 2 5 ar
|
| 33 |
+
4 3 4 1
|
| 34 |
+
5 3 13 ar
|
| 35 |
+
6 5 6 1
|
| 36 |
+
7 5 10 ar
|
| 37 |
+
8 6 7 am
|
| 38 |
+
9 7 8 2
|
| 39 |
+
10 7 9 am
|
| 40 |
+
11 9 10 1
|
| 41 |
+
12 10 11 ar
|
| 42 |
+
13 11 12 1
|
| 43 |
+
14 11 13 ar
|
| 44 |
+
15 13 14 1
|
| 45 |
+
16 6 15 1
|
| 46 |
+
17 9 16 1
|
| 47 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 48 |
+
1 K32 1
|
| 49 |
+
|
2oxd/2oxd_ligand.sdf
ADDED
|
@@ -0,0 +1,39 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2oxd_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
16 17 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
20.8110 6.8790 22.6790 Br 0 0 0 0 0
|
| 6 |
+
21.2880 7.4110 20.9220 C 0 0 0 0 0
|
| 7 |
+
20.6760 8.5010 20.2990 C 0 0 0 0 0
|
| 8 |
+
19.3420 9.4560 21.2260 Br 0 0 0 0 0
|
| 9 |
+
22.2620 6.6750 20.2730 C 0 0 0 0 0
|
| 10 |
+
22.9720 5.6030 20.6600 N 0 0 0 0 0
|
| 11 |
+
23.7530 5.3520 19.6020 C 0 0 0 0 0
|
| 12 |
+
24.5850 4.3650 19.6250 O 0 0 0 0 0
|
| 13 |
+
23.6080 6.1890 18.5520 N 0 0 0 0 0
|
| 14 |
+
22.6460 7.0410 18.9780 C 0 0 0 0 0
|
| 15 |
+
22.0190 8.1310 18.3790 C 0 0 0 0 0
|
| 16 |
+
22.5890 8.5760 16.6590 Br 0 0 0 0 0
|
| 17 |
+
21.0250 8.8860 19.0070 C 0 0 0 0 0
|
| 18 |
+
20.1640 10.3830 18.1410 Br 0 0 0 0 0
|
| 19 |
+
22.9271 5.1008 21.5467 H 0 0 0 0 0
|
| 20 |
+
24.1012 6.1812 17.6592 H 0 0 0 0 0
|
| 21 |
+
1 2 1 0 0 0
|
| 22 |
+
2 3 4 0 0 0
|
| 23 |
+
2 5 4 0 0 0
|
| 24 |
+
3 4 1 0 0 0
|
| 25 |
+
3 13 4 0 0 0
|
| 26 |
+
5 6 1 0 0 0
|
| 27 |
+
5 10 4 0 0 0
|
| 28 |
+
6 7 1 0 0 0
|
| 29 |
+
7 8 2 0 0 0
|
| 30 |
+
7 9 1 0 0 0
|
| 31 |
+
9 10 1 0 0 0
|
| 32 |
+
10 11 4 0 0 0
|
| 33 |
+
11 12 1 0 0 0
|
| 34 |
+
11 13 4 0 0 0
|
| 35 |
+
13 14 1 0 0 0
|
| 36 |
+
6 15 1 0 0 0
|
| 37 |
+
9 16 1 0 0 0
|
| 38 |
+
M END
|
| 39 |
+
$$$$
|
2oxd/2oxd_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2oxd/2oxd_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2vmc/2vmc_ligand.mol2
ADDED
|
@@ -0,0 +1,76 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Tue Oct 16 15:17:24 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2vmc_ligand
|
| 7 |
+
30 30 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 11.1170 10.2320 122.9420 C.3 1 NGA 0.1823
|
| 14 |
+
2 O1 12.1550 9.7630 123.8070 O.3 1 NGA -0.3651
|
| 15 |
+
3 C2 11.3170 9.6660 121.5380 C.3 1 NGA 0.1208
|
| 16 |
+
4 C3 10.1750 10.1330 120.6020 C.3 1 NGA 0.1110
|
| 17 |
+
5 C4 8.8000 9.8220 121.2070 C.3 1 NGA 0.1116
|
| 18 |
+
6 C5 8.7690 10.3350 122.6620 C.3 1 NGA 0.1130
|
| 19 |
+
7 C6 7.4520 10.0070 123.3540 C.3 1 NGA 0.0730
|
| 20 |
+
8 C7 13.7080 9.3390 121.1950 C.2 1 NGA 0.1733
|
| 21 |
+
9 C8 14.9660 9.9080 120.5910 C.3 1 NGA 0.0257
|
| 22 |
+
10 N2 12.6050 10.0740 120.9860 N.am 1 NGA -0.2766
|
| 23 |
+
11 O3 10.2690 9.5750 119.2780 O.3 1 NGA -0.3867
|
| 24 |
+
12 O4 8.5320 8.4190 121.1580 O.3 1 NGA -0.3865
|
| 25 |
+
13 O5 9.8490 9.8330 123.4620 O.3 1 NGA -0.3410
|
| 26 |
+
14 O6 7.4320 10.7420 124.5960 O.3 1 NGA -0.3924
|
| 27 |
+
15 O7 13.6820 8.2830 121.8350 O.2 1 NGA -0.3974
|
| 28 |
+
16 H1 11.1559 11.3302 122.8938 H 1 NGA 0.0932
|
| 29 |
+
17 H2 12.0359 10.1345 124.6731 H 1 NGA 0.2126
|
| 30 |
+
18 H3 11.2952 8.5680 121.5996 H 1 NGA 0.0633
|
| 31 |
+
19 H4 10.2600 11.2254 120.5055 H 1 NGA 0.0645
|
| 32 |
+
20 H5 8.0269 10.3469 120.6266 H 1 NGA 0.0647
|
| 33 |
+
21 H6 8.8657 11.4299 122.6200 H 1 NGA 0.0647
|
| 34 |
+
22 H7 7.3890 8.9271 123.5534 H 1 NGA 0.0584
|
| 35 |
+
23 H8 6.6063 10.3129 122.7207 H 1 NGA 0.0584
|
| 36 |
+
24 H9 15.8129 9.2418 120.8124 H 1 NGA 0.0467
|
| 37 |
+
25 H10 15.1606 10.9027 121.0184 H 1 NGA 0.0467
|
| 38 |
+
26 H11 14.8429 9.9947 119.5014 H 1 NGA 0.0467
|
| 39 |
+
27 H12 12.6663 10.9126 120.4447 H 1 NGA 0.1857
|
| 40 |
+
28 H13 9.5926 9.9522 118.7278 H 1 NGA 0.2100
|
| 41 |
+
29 H14 8.5559 8.1245 120.2552 H 1 NGA 0.2100
|
| 42 |
+
30 H15 6.6212 10.5610 125.0568 H 1 NGA 0.2095
|
| 43 |
+
@<TRIPOS>BOND
|
| 44 |
+
1 1 2 1
|
| 45 |
+
2 3 1 1
|
| 46 |
+
3 1 13 1
|
| 47 |
+
4 3 4 1
|
| 48 |
+
5 10 3 1
|
| 49 |
+
6 4 5 1
|
| 50 |
+
7 4 11 1
|
| 51 |
+
8 5 6 1
|
| 52 |
+
9 5 12 1
|
| 53 |
+
10 6 7 1
|
| 54 |
+
11 13 6 1
|
| 55 |
+
12 7 14 1
|
| 56 |
+
13 8 9 1
|
| 57 |
+
14 8 10 am
|
| 58 |
+
15 8 15 2
|
| 59 |
+
16 1 16 1
|
| 60 |
+
17 2 17 1
|
| 61 |
+
18 3 18 1
|
| 62 |
+
19 4 19 1
|
| 63 |
+
20 5 20 1
|
| 64 |
+
21 6 21 1
|
| 65 |
+
22 7 22 1
|
| 66 |
+
23 7 23 1
|
| 67 |
+
24 9 24 1
|
| 68 |
+
25 9 25 1
|
| 69 |
+
26 9 26 1
|
| 70 |
+
27 10 27 1
|
| 71 |
+
28 11 28 1
|
| 72 |
+
29 12 29 1
|
| 73 |
+
30 14 30 1
|
| 74 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 75 |
+
1 NGA 1
|
| 76 |
+
|
2vmc/2vmc_ligand.sdf
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2vmc_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
30 30 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
11.1170 10.2320 122.9420 C 0 0 0 0 0
|
| 6 |
+
12.1550 9.7630 123.8070 O 0 0 0 0 0
|
| 7 |
+
11.3170 9.6660 121.5380 C 0 0 0 0 0
|
| 8 |
+
10.1750 10.1330 120.6020 C 0 0 0 0 0
|
| 9 |
+
8.8000 9.8220 121.2070 C 0 0 0 0 0
|
| 10 |
+
8.7690 10.3350 122.6620 C 0 0 0 0 0
|
| 11 |
+
7.4520 10.0070 123.3540 C 0 0 0 0 0
|
| 12 |
+
13.7080 9.3390 121.1950 C 0 0 0 0 0
|
| 13 |
+
14.9660 9.9080 120.5910 C 0 0 0 0 0
|
| 14 |
+
12.6050 10.0740 120.9860 N 0 0 0 0 0
|
| 15 |
+
10.2690 9.5750 119.2780 O 0 0 0 0 0
|
| 16 |
+
8.5320 8.4190 121.1580 O 0 0 0 0 0
|
| 17 |
+
9.8490 9.8330 123.4620 O 0 0 0 0 0
|
| 18 |
+
7.4320 10.7420 124.5960 O 0 0 0 0 0
|
| 19 |
+
13.6820 8.2830 121.8350 O 0 0 0 0 0
|
| 20 |
+
11.1522 11.3200 122.8868 H 0 0 0 0 0
|
| 21 |
+
13.0075 10.0316 123.4568 H 0 0 0 0 0
|
| 22 |
+
11.3009 8.5785 121.6101 H 0 0 0 0 0
|
| 23 |
+
10.2883 11.2128 120.5061 H 0 0 0 0 0
|
| 24 |
+
8.0249 10.3245 120.6283 H 0 0 0 0 0
|
| 25 |
+
8.8794 11.4162 122.5790 H 0 0 0 0 0
|
| 26 |
+
7.3703 8.9359 123.5389 H 0 0 0 0 0
|
| 27 |
+
6.6065 10.2883 122.7262 H 0 0 0 0 0
|
| 28 |
+
15.6930 10.0979 121.3807 H 0 0 0 0 0
|
| 29 |
+
15.3800 9.1949 119.8781 H 0 0 0 0 0
|
| 30 |
+
14.7317 10.8413 120.0790 H 0 0 0 0 0
|
| 31 |
+
12.6675 10.9294 120.4339 H 0 0 0 0 0
|
| 32 |
+
11.1321 9.7748 118.9083 H 0 0 0 0 0
|
| 33 |
+
8.5561 8.1214 120.2456 H 0 0 0 0 0
|
| 34 |
+
6.6127 10.5591 125.0616 H 0 0 0 0 0
|
| 35 |
+
1 2 1 0 0 0
|
| 36 |
+
3 1 1 0 0 0
|
| 37 |
+
1 13 1 0 0 0
|
| 38 |
+
3 4 1 0 0 0
|
| 39 |
+
10 3 1 0 0 0
|
| 40 |
+
4 5 1 0 0 0
|
| 41 |
+
4 11 1 0 0 0
|
| 42 |
+
5 6 1 0 0 0
|
| 43 |
+
5 12 1 0 0 0
|
| 44 |
+
6 7 1 0 0 0
|
| 45 |
+
13 6 1 0 0 0
|
| 46 |
+
7 14 1 0 0 0
|
| 47 |
+
8 9 1 0 0 0
|
| 48 |
+
8 10 1 0 0 0
|
| 49 |
+
8 15 2 0 0 0
|
| 50 |
+
1 16 1 0 0 0
|
| 51 |
+
2 17 1 0 0 0
|
| 52 |
+
3 18 1 0 0 0
|
| 53 |
+
4 19 1 0 0 0
|
| 54 |
+
5 20 1 0 0 0
|
| 55 |
+
6 21 1 0 0 0
|
| 56 |
+
7 22 1 0 0 0
|
| 57 |
+
7 23 1 0 0 0
|
| 58 |
+
9 24 1 0 0 0
|
| 59 |
+
9 25 1 0 0 0
|
| 60 |
+
9 26 1 0 0 0
|
| 61 |
+
10 27 1 0 0 0
|
| 62 |
+
11 28 1 0 0 0
|
| 63 |
+
12 29 1 0 0 0
|
| 64 |
+
14 30 1 0 0 0
|
| 65 |
+
M END
|
| 66 |
+
$$$$
|
2vmc/2vmc_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2vmc/2vmc_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2ybt/2ybt_ligand.mol2
ADDED
|
@@ -0,0 +1,117 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:13:06 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2ybt_ligand
|
| 7 |
+
49 52 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N1 26.7730 -31.7400 -41.8440 N.am 1 DW0 -0.1708
|
| 14 |
+
2 C2 27.6310 -30.8100 -41.3050 C.2 1 DW0 0.3179
|
| 15 |
+
3 O2 28.8550 -30.7840 -41.6500 O.2 1 DW0 -0.3873
|
| 16 |
+
4 N3 27.0880 -29.9170 -40.3830 N.am 1 DW0 -0.2025
|
| 17 |
+
5 C4 25.6880 -30.0210 -39.9980 C.2 1 DW0 0.1377
|
| 18 |
+
6 C5 24.8200 -30.9870 -40.5760 C.2 1 DW0 0.1624
|
| 19 |
+
7 C6 25.3860 -31.8430 -41.5260 C.2 1 DW0 0.2299
|
| 20 |
+
8 O6 24.7130 -32.7090 -42.1260 O.2 1 DW0 -0.4007
|
| 21 |
+
9 N7 23.5880 -30.8060 -40.0070 N.pl3 1 DW0 -0.2541
|
| 22 |
+
10 C8 23.6740 -29.7920 -39.1320 C.2 1 DW0 0.0975
|
| 23 |
+
11 N9 24.9300 -29.2990 -39.1340 N.2 1 DW0 -0.2859
|
| 24 |
+
12 N10 28.5050 -36.1870 -43.2990 N.am 1 DW0 -0.1708
|
| 25 |
+
13 CA0 28.1620 -34.7680 -43.5540 C.3 1 DW0 0.0610
|
| 26 |
+
14 CAA 22.2500 -31.5370 -40.2420 C.3 1 DW0 0.0424
|
| 27 |
+
15 CAB 25.6560 -39.8500 -42.8900 C.3 1 DW0 0.0424
|
| 28 |
+
16 CAC 28.0360 -28.9120 -39.7870 C.3 1 DW0 0.0446
|
| 29 |
+
17 CAD 31.6400 -38.2890 -42.8160 C.3 1 DW0 0.0446
|
| 30 |
+
18 OAF 26.2600 -36.7080 -43.3690 O.2 1 DW0 -0.4007
|
| 31 |
+
19 OAH 30.8060 -35.8350 -43.2340 O.2 1 DW0 -0.3873
|
| 32 |
+
20 CAJ 27.9900 -40.6500 -42.6220 C.2 1 DW0 0.0975
|
| 33 |
+
21 CAK 27.3460 -32.6410 -42.8600 C.3 1 DW0 0.0610
|
| 34 |
+
22 CAL 27.5600 -34.0520 -42.3350 C.3 1 DW0 -0.0033
|
| 35 |
+
23 NAN 29.2470 -40.1200 -42.6340 N.2 1 DW0 -0.2859
|
| 36 |
+
24 CAP 27.4330 -37.1360 -43.2180 C.2 1 DW0 0.2299
|
| 37 |
+
25 CAR 29.8580 -36.6100 -43.1840 C.2 1 DW0 0.3179
|
| 38 |
+
26 CAT 29.1550 -38.8260 -42.8430 C.2 1 DW0 0.1377
|
| 39 |
+
27 CAV 27.7920 -38.4750 -42.9730 C.2 1 DW0 0.1624
|
| 40 |
+
28 NAX 27.1230 -39.6350 -42.8190 N.pl3 1 DW0 -0.2541
|
| 41 |
+
29 NAZ 30.1830 -37.9070 -42.9540 N.am 1 DW0 -0.2025
|
| 42 |
+
30 H1 22.8557 -29.4237 -38.5151 H 1 DW0 0.1263
|
| 43 |
+
31 H2 27.4319 -34.7290 -44.3758 H 1 DW0 0.0576
|
| 44 |
+
32 H3 29.0781 -34.2369 -43.8518 H 1 DW0 0.0576
|
| 45 |
+
33 H4 22.3920 -32.3299 -40.9911 H 1 DW0 0.0575
|
| 46 |
+
34 H5 21.4992 -30.8198 -40.6051 H 1 DW0 0.0575
|
| 47 |
+
35 H6 21.9048 -31.9826 -39.2974 H 1 DW0 0.0575
|
| 48 |
+
36 H7 25.4327 -40.9136 -42.7199 H 1 DW0 0.0575
|
| 49 |
+
37 H8 25.2895 -39.5528 -43.8836 H 1 DW0 0.0575
|
| 50 |
+
38 H9 25.1587 -39.2431 -42.1191 H 1 DW0 0.0575
|
| 51 |
+
39 H10 29.0312 -29.0334 -40.2397 H 1 DW0 0.0548
|
| 52 |
+
40 H11 28.1052 -29.0723 -38.7010 H 1 DW0 0.0548
|
| 53 |
+
41 H12 27.6648 -27.8956 -39.9847 H 1 DW0 0.0548
|
| 54 |
+
42 H13 32.2672 -37.3942 -42.9423 H 1 DW0 0.0548
|
| 55 |
+
43 H14 31.8993 -39.0302 -43.5863 H 1 DW0 0.0548
|
| 56 |
+
44 H15 31.8132 -38.7203 -41.8190 H 1 DW0 0.0548
|
| 57 |
+
45 H16 27.7336 -41.6988 -42.4797 H 1 DW0 0.1263
|
| 58 |
+
46 H17 28.3154 -32.2350 -43.1847 H 1 DW0 0.0576
|
| 59 |
+
47 H18 26.6605 -32.6848 -43.7191 H 1 DW0 0.0576
|
| 60 |
+
48 H19 28.2575 -34.0589 -41.4845 H 1 DW0 0.0312
|
| 61 |
+
49 H20 26.6082 -34.5129 -42.0324 H 1 DW0 0.0312
|
| 62 |
+
@<TRIPOS>BOND
|
| 63 |
+
1 1 2 am
|
| 64 |
+
2 1 7 am
|
| 65 |
+
3 21 1 1
|
| 66 |
+
4 2 3 2
|
| 67 |
+
5 2 4 am
|
| 68 |
+
6 4 5 1
|
| 69 |
+
7 4 16 1
|
| 70 |
+
8 6 5 2
|
| 71 |
+
9 5 11 1
|
| 72 |
+
10 7 6 1
|
| 73 |
+
11 6 9 1
|
| 74 |
+
12 7 8 2
|
| 75 |
+
13 9 10 1
|
| 76 |
+
14 9 14 1
|
| 77 |
+
15 10 11 2
|
| 78 |
+
16 12 13 1
|
| 79 |
+
17 24 12 am
|
| 80 |
+
18 12 25 am
|
| 81 |
+
19 13 22 1
|
| 82 |
+
20 28 15 1
|
| 83 |
+
21 29 17 1
|
| 84 |
+
22 24 18 2
|
| 85 |
+
23 25 19 2
|
| 86 |
+
24 23 20 2
|
| 87 |
+
25 20 28 1
|
| 88 |
+
26 22 21 1
|
| 89 |
+
27 26 23 1
|
| 90 |
+
28 27 24 1
|
| 91 |
+
29 25 29 am
|
| 92 |
+
30 26 27 2
|
| 93 |
+
31 26 29 1
|
| 94 |
+
32 27 28 1
|
| 95 |
+
33 10 30 1
|
| 96 |
+
34 13 31 1
|
| 97 |
+
35 13 32 1
|
| 98 |
+
36 14 33 1
|
| 99 |
+
37 14 34 1
|
| 100 |
+
38 14 35 1
|
| 101 |
+
39 15 36 1
|
| 102 |
+
40 15 37 1
|
| 103 |
+
41 15 38 1
|
| 104 |
+
42 16 39 1
|
| 105 |
+
43 16 40 1
|
| 106 |
+
44 16 41 1
|
| 107 |
+
45 17 42 1
|
| 108 |
+
46 17 43 1
|
| 109 |
+
47 17 44 1
|
| 110 |
+
48 20 45 1
|
| 111 |
+
49 21 46 1
|
| 112 |
+
50 21 47 1
|
| 113 |
+
51 22 48 1
|
| 114 |
+
52 22 49 1
|
| 115 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 116 |
+
1 DW0 1
|
| 117 |
+
|
2ybt/2ybt_ligand.sdf
ADDED
|
@@ -0,0 +1,107 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2ybt_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
49 52 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
26.7730 -31.7400 -41.8440 N 0 0 0 0 0
|
| 6 |
+
27.6310 -30.8100 -41.3050 C 0 0 0 0 0
|
| 7 |
+
28.8550 -30.7840 -41.6500 O 0 0 0 0 0
|
| 8 |
+
27.0880 -29.9170 -40.3830 N 0 0 0 0 0
|
| 9 |
+
25.6880 -30.0210 -39.9980 C 0 0 0 0 0
|
| 10 |
+
24.8200 -30.9870 -40.5760 C 0 0 0 0 0
|
| 11 |
+
25.3860 -31.8430 -41.5260 C 0 0 0 0 0
|
| 12 |
+
24.7130 -32.7090 -42.1260 O 0 0 0 0 0
|
| 13 |
+
23.5880 -30.8060 -40.0070 N 0 0 0 0 0
|
| 14 |
+
23.6740 -29.7920 -39.1320 C 0 0 0 0 0
|
| 15 |
+
24.9300 -29.2990 -39.1340 N 0 0 0 0 0
|
| 16 |
+
28.5050 -36.1870 -43.2990 N 0 0 0 0 0
|
| 17 |
+
28.1620 -34.7680 -43.5540 C 0 0 0 0 0
|
| 18 |
+
22.2500 -31.5370 -40.2420 C 0 0 0 0 0
|
| 19 |
+
25.6560 -39.8500 -42.8900 C 0 0 0 0 0
|
| 20 |
+
28.0360 -28.9120 -39.7870 C 0 0 0 0 0
|
| 21 |
+
31.6400 -38.2890 -42.8160 C 0 0 0 0 0
|
| 22 |
+
26.2600 -36.7080 -43.3690 O 0 0 0 0 0
|
| 23 |
+
30.8060 -35.8350 -43.2340 O 0 0 0 0 0
|
| 24 |
+
27.9900 -40.6500 -42.6220 C 0 0 0 0 0
|
| 25 |
+
27.3460 -32.6410 -42.8600 C 0 0 0 0 0
|
| 26 |
+
27.5600 -34.0520 -42.3350 C 0 0 0 0 0
|
| 27 |
+
29.2470 -40.1200 -42.6340 N 0 0 0 0 0
|
| 28 |
+
27.4330 -37.1360 -43.2180 C 0 0 0 0 0
|
| 29 |
+
29.8580 -36.6100 -43.1840 C 0 0 0 0 0
|
| 30 |
+
29.1550 -38.8260 -42.8430 C 0 0 0 0 0
|
| 31 |
+
27.7920 -38.4750 -42.9730 C 0 0 0 0 0
|
| 32 |
+
27.1230 -39.6350 -42.8190 N 0 0 0 0 0
|
| 33 |
+
30.1830 -37.9070 -42.9540 N 0 0 0 0 0
|
| 34 |
+
22.8549 -29.4233 -38.5145 H 0 0 0 0 0
|
| 35 |
+
27.4135 -34.7500 -44.3462 H 0 0 0 0 0
|
| 36 |
+
29.0853 -34.2503 -43.8141 H 0 0 0 0 0
|
| 37 |
+
21.9536 -31.4234 -41.2848 H 0 0 0 0 0
|
| 38 |
+
22.3701 -32.5953 -40.0103 H 0 0 0 0 0
|
| 39 |
+
21.4842 -31.1070 -39.5964 H 0 0 0 0 0
|
| 40 |
+
25.4286 -40.5259 -43.7144 H 0 0 0 0 0
|
| 41 |
+
25.3084 -40.2869 -41.9538 H 0 0 0 0 0
|
| 42 |
+
25.1576 -38.8946 -43.0537 H 0 0 0 0 0
|
| 43 |
+
27.6670 -27.9054 -39.9835 H 0 0 0 0 0
|
| 44 |
+
28.1037 -29.0719 -38.7109 H 0 0 0 0 0
|
| 45 |
+
29.0217 -29.0332 -40.2363 H 0 0 0 0 0
|
| 46 |
+
32.1696 -38.0343 -43.7340 H 0 0 0 0 0
|
| 47 |
+
32.0790 -37.7458 -41.9791 H 0 0 0 0 0
|
| 48 |
+
31.7177 -39.3612 -42.6357 H 0 0 0 0 0
|
| 49 |
+
27.7334 -41.6997 -42.4796 H 0 0 0 0 0
|
| 50 |
+
28.3165 -32.2414 -43.1541 H 0 0 0 0 0
|
| 51 |
+
26.6458 -32.6955 -43.6936 H 0 0 0 0 0
|
| 52 |
+
28.2028 -34.0891 -41.4555 H 0 0 0 0 0
|
| 53 |
+
26.6435 -34.5183 -41.9734 H 0 0 0 0 0
|
| 54 |
+
1 2 1 0 0 0
|
| 55 |
+
1 7 1 0 0 0
|
| 56 |
+
21 1 1 0 0 0
|
| 57 |
+
2 3 2 0 0 0
|
| 58 |
+
2 4 1 0 0 0
|
| 59 |
+
4 5 1 0 0 0
|
| 60 |
+
4 16 1 0 0 0
|
| 61 |
+
6 5 4 0 0 0
|
| 62 |
+
5 11 4 0 0 0
|
| 63 |
+
7 6 1 0 0 0
|
| 64 |
+
6 9 4 0 0 0
|
| 65 |
+
7 8 2 0 0 0
|
| 66 |
+
9 10 4 0 0 0
|
| 67 |
+
9 14 1 0 0 0
|
| 68 |
+
10 11 4 0 0 0
|
| 69 |
+
12 13 1 0 0 0
|
| 70 |
+
24 12 1 0 0 0
|
| 71 |
+
12 25 1 0 0 0
|
| 72 |
+
13 22 1 0 0 0
|
| 73 |
+
28 15 1 0 0 0
|
| 74 |
+
29 17 1 0 0 0
|
| 75 |
+
24 18 2 0 0 0
|
| 76 |
+
25 19 2 0 0 0
|
| 77 |
+
23 20 4 0 0 0
|
| 78 |
+
20 28 4 0 0 0
|
| 79 |
+
22 21 1 0 0 0
|
| 80 |
+
26 23 4 0 0 0
|
| 81 |
+
27 24 1 0 0 0
|
| 82 |
+
25 29 1 0 0 0
|
| 83 |
+
26 27 4 0 0 0
|
| 84 |
+
26 29 1 0 0 0
|
| 85 |
+
27 28 4 0 0 0
|
| 86 |
+
10 30 1 0 0 0
|
| 87 |
+
13 31 1 0 0 0
|
| 88 |
+
13 32 1 0 0 0
|
| 89 |
+
14 33 1 0 0 0
|
| 90 |
+
14 34 1 0 0 0
|
| 91 |
+
14 35 1 0 0 0
|
| 92 |
+
15 36 1 0 0 0
|
| 93 |
+
15 37 1 0 0 0
|
| 94 |
+
15 38 1 0 0 0
|
| 95 |
+
16 39 1 0 0 0
|
| 96 |
+
16 40 1 0 0 0
|
| 97 |
+
16 41 1 0 0 0
|
| 98 |
+
17 42 1 0 0 0
|
| 99 |
+
17 43 1 0 0 0
|
| 100 |
+
17 44 1 0 0 0
|
| 101 |
+
20 45 1 0 0 0
|
| 102 |
+
21 46 1 0 0 0
|
| 103 |
+
21 47 1 0 0 0
|
| 104 |
+
22 48 1 0 0 0
|
| 105 |
+
22 49 1 0 0 0
|
| 106 |
+
M END
|
| 107 |
+
$$$$
|
2ybt/2ybt_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2ybt/2ybt_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
3bm8/3bm8_ligand.mol2
ADDED
|
@@ -0,0 +1,60 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:57 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
3bm8_ligand
|
| 7 |
+
22 22 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 47.6480 16.1380 23.0830 C.ar 1 PSY -0.0729
|
| 14 |
+
2 C2 46.5230 15.6800 23.8190 C.ar 1 PSY -0.0706
|
| 15 |
+
3 C3 47.7110 17.5210 22.7470 C.ar 1 PSY -0.0706
|
| 16 |
+
4 C4 45.4860 16.5800 24.2100 C.ar 1 PSY -0.0307
|
| 17 |
+
5 C5 46.6850 18.4270 23.1310 C.ar 1 PSY -0.0307
|
| 18 |
+
6 C6 45.5750 17.9570 23.8600 C.ar 1 PSY 0.1230
|
| 19 |
+
7 O1 44.5980 18.8760 24.2310 O.3 1 PSY -0.1699
|
| 20 |
+
8 S 43.3370 19.3980 23.3640 S.o2 1 PSY 0.1001
|
| 21 |
+
9 O2 42.6230 20.3770 24.1500 O.2 1 PSY -0.1433
|
| 22 |
+
10 O3 43.7780 20.0330 22.1480 O.2 1 PSY -0.1433
|
| 23 |
+
11 C7 42.3740 18.3780 23.0350 C.3 1 PSY 0.0940
|
| 24 |
+
12 C8 41.3400 18.7630 22.0890 C.3 1 PSY -0.0430
|
| 25 |
+
13 H1 48.4357 15.4552 22.7856 H 1 PSY 0.0523
|
| 26 |
+
14 H2 46.4507 14.6323 24.0877 H 1 PSY 0.0589
|
| 27 |
+
15 H3 48.5611 17.8911 22.1854 H 1 PSY 0.0589
|
| 28 |
+
16 H4 44.6334 16.2159 24.7717 H 1 PSY 0.0543
|
| 29 |
+
17 H5 46.7565 19.4752 22.8639 H 1 PSY 0.0543
|
| 30 |
+
18 H6 41.8793 18.0681 23.9673 H 1 PSY 0.0526
|
| 31 |
+
19 H7 42.9201 17.5239 22.6082 H 1 PSY 0.0526
|
| 32 |
+
20 H8 40.6668 17.9107 21.9147 H 1 PSY 0.0246
|
| 33 |
+
21 H9 41.8057 19.0627 21.1386 H 1 PSY 0.0246
|
| 34 |
+
22 H10 40.7649 19.6069 22.4977 H 1 PSY 0.0246
|
| 35 |
+
@<TRIPOS>BOND
|
| 36 |
+
1 1 2 ar
|
| 37 |
+
2 1 3 ar
|
| 38 |
+
3 2 4 ar
|
| 39 |
+
4 3 5 ar
|
| 40 |
+
5 4 6 ar
|
| 41 |
+
6 5 6 ar
|
| 42 |
+
7 6 7 1
|
| 43 |
+
8 7 8 1
|
| 44 |
+
9 8 9 2
|
| 45 |
+
10 8 10 2
|
| 46 |
+
11 8 11 1
|
| 47 |
+
12 11 12 1
|
| 48 |
+
13 1 13 1
|
| 49 |
+
14 2 14 1
|
| 50 |
+
15 3 15 1
|
| 51 |
+
16 4 16 1
|
| 52 |
+
17 5 17 1
|
| 53 |
+
18 11 18 1
|
| 54 |
+
19 11 19 1
|
| 55 |
+
20 12 20 1
|
| 56 |
+
21 12 21 1
|
| 57 |
+
22 12 22 1
|
| 58 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 59 |
+
1 PSY 1
|
| 60 |
+
|
3bm8/3bm8_ligand.sdf
ADDED
|
@@ -0,0 +1,50 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
3bm8_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
22 22 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
47.6480 16.1380 23.0830 C 0 0 0 0 0
|
| 6 |
+
46.5230 15.6800 23.8190 C 0 0 0 0 0
|
| 7 |
+
47.7110 17.5210 22.7470 C 0 0 0 0 0
|
| 8 |
+
45.4860 16.5800 24.2100 C 0 0 0 0 0
|
| 9 |
+
46.6850 18.4270 23.1310 C 0 0 0 0 0
|
| 10 |
+
45.5750 17.9570 23.8600 C 0 0 0 0 0
|
| 11 |
+
44.5980 18.8760 24.2310 O 0 0 0 0 0
|
| 12 |
+
43.3370 19.3980 23.3640 S 0 0 0 0 0
|
| 13 |
+
42.6230 20.3770 24.1500 O 0 0 0 0 0
|
| 14 |
+
43.7780 20.0330 22.1480 O 0 0 0 0 0
|
| 15 |
+
42.3740 18.3780 23.0350 C 0 0 0 0 0
|
| 16 |
+
41.3400 18.7630 22.0890 C 0 0 0 0 0
|
| 17 |
+
48.4400 15.4514 22.7840 H 0 0 0 0 0
|
| 18 |
+
46.4503 14.6265 24.0891 H 0 0 0 0 0
|
| 19 |
+
48.5658 17.8932 22.1823 H 0 0 0 0 0
|
| 20 |
+
44.6287 16.2139 24.7748 H 0 0 0 0 0
|
| 21 |
+
46.7569 19.4810 22.8625 H 0 0 0 0 0
|
| 22 |
+
41.8622 18.1277 23.9643 H 0 0 0 0 0
|
| 23 |
+
42.9327 17.5679 22.5663 H 0 0 0 0 0
|
| 24 |
+
40.7709 19.5993 22.4951 H 0 0 0 0 0
|
| 25 |
+
41.8027 19.0597 21.1478 H 0 0 0 0 0
|
| 26 |
+
40.6736 17.9177 21.9172 H 0 0 0 0 0
|
| 27 |
+
1 2 4 0 0 0
|
| 28 |
+
1 3 4 0 0 0
|
| 29 |
+
2 4 4 0 0 0
|
| 30 |
+
3 5 4 0 0 0
|
| 31 |
+
4 6 4 0 0 0
|
| 32 |
+
5 6 4 0 0 0
|
| 33 |
+
6 7 1 0 0 0
|
| 34 |
+
7 8 1 0 0 0
|
| 35 |
+
8 9 2 0 0 0
|
| 36 |
+
8 10 2 0 0 0
|
| 37 |
+
8 11 1 0 0 0
|
| 38 |
+
11 12 1 0 0 0
|
| 39 |
+
1 13 1 0 0 0
|
| 40 |
+
2 14 1 0 0 0
|
| 41 |
+
3 15 1 0 0 0
|
| 42 |
+
4 16 1 0 0 0
|
| 43 |
+
5 17 1 0 0 0
|
| 44 |
+
11 18 1 0 0 0
|
| 45 |
+
11 19 1 0 0 0
|
| 46 |
+
12 20 1 0 0 0
|
| 47 |
+
12 21 1 0 0 0
|
| 48 |
+
12 22 1 0 0 0
|
| 49 |
+
M END
|
| 50 |
+
$$$$
|