Datasets:

PDBbind_test / 6dql /6dql_input_conf_3.sdf
linbc20's picture
Add batch 3
adfdd3e verified
6dql_ligand
RDKit 3D
159161 0 0 0 0 0 0 0 0999 V2000
7.8232 1.2264 3.2828 N 0 0 0 0 0 4 0 0 0 0 0 0
8.5749 0.5264 2.1683 C 0 0 2 0 0 0 0 0 0 0 0 0
7.5238 0.1165 1.1147 C 0 0 0 0 0 0 0 0 0 0 0 0
6.5255 0.8334 0.9879 O 0 0 0 0 0 0 0 0 0 0 0 0
9.3991 -0.6031 2.7897 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6575 -0.9294 1.9769 C 0 0 0 0 0 0 0 0 0 0 0 0
11.8519 0.4363 2.1026 S 0 0 0 0 0 0 0 0 0 0 0 0
12.6941 0.2263 0.5051 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6823 -1.0295 0.3940 N 0 0 0 0 0 0 0 0 0 0 0 0
6.7883 -1.3968 -0.7261 C 0 0 2 0 0 0 0 0 0 0 0 0
5.4796 -2.0446 -0.2134 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0122 -3.0778 -0.6795 O 0 0 0 0 0 0 0 0 0 0 0 0
7.4929 -2.3329 -1.7282 C 0 0 0 0 0 0 0 0 0 0 0 0
8.8613 -1.8626 -2.1295 C 0 0 0 0 0 0 0 0 0 0 0 0
10.0410 -2.5617 -1.9482 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2049 -0.6313 -2.7799 C 0 0 0 0 0 0 0 0 0 0 0 0
11.0673 -1.8218 -2.4689 N 0 0 0 0 0 0 0 0 0 0 0 0
10.5927 -0.6225 -2.9460 C 0 0 0 0 0 0 0 0 0 0 0 0
8.4716 0.4778 -3.2481 C 0 0 0 0 0 0 0 0 0 0 0 0
11.2790 0.4455 -3.5312 C 0 0 0 0 0 0 0 0 0 0 0 0
9.1429 1.5543 -3.8357 C 0 0 0 0 0 0 0 0 0 0 0 0
10.5277 1.5391 -3.9713 C 0 0 0 0 0 0 0 0 0 0 0 0
4.8297 -1.2946 0.7480 N 0 0 0 0 0 0 0 0 0 0 0 0
3.4704 -1.5853 1.2017 C 0 0 2 0 0 0 0 0 0 0 0 0
2.6248 -0.2905 1.1649 C 0 0 0 0 0 0 0 0 0 0 0 0
1.6582 -0.0908 1.8936 O 0 0 0 0 0 0 0 0 0 0 0 0
3.4188 -2.3147 2.5553 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2540 -1.7829 3.7445 C 0 0 0 0 0 0 0 0 0 0 0 0
5.7145 -2.2331 3.6790 C 0 0 0 0 0 0 0 0 0 0 0 0
4.1728 -0.2750 3.9650 C 0 0 0 0 0 0 0 0 0 0 0 0
2.9801 0.5799 0.1451 N 0 0 0 0 0 0 0 0 0 0 0 0
2.1087 1.7110 -0.2129 C 0 0 2 0 0 0 0 0 0 0 0 0
1.1247 1.1942 -1.2905 C 0 0 0 0 0 0 0 0 0 0 0 0
1.1012 1.6046 -2.4444 O 0 0 0 0 0 0 0 0 0 0 0 0
2.9450 2.9071 -0.6974 C 0 0 0 0 0 0 0 0 0 0 0 0
3.2733 3.9290 0.4145 C 0 0 0 0 0 0 0 0 0 0 0 0
4.1049 5.0799 -0.1672 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0094 3.3215 1.6068 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3130 0.1765 -0.8358 N 0 0 0 0 0 0 0 0 0 0 0 0
-0.9176 -0.2183 -1.5353 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.0114 0.3327 -0.5998 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.9255 0.2064 0.6230 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.9501 -1.7500 -1.6628 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.5705 -2.2547 -2.9852 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.1445 -3.7066 -3.2439 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.0940 -2.1734 -2.9934 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.0105 1.0480 -1.2167 N 0 0 0 0 0 0 0 0 0 0 0 0
-4.1299 1.5725 -0.4363 C 0 0 2 0 0 0 0 0 0 0 0 0
-5.2087 0.4891 -0.2213 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.2529 -0.5362 -0.8987 O 0 0 0 0 0 0 0 0 0 0 0 0
-4.6955 2.8692 -1.0473 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.7111 2.7359 -2.2001 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.1543 2.0487 -3.4441 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.2278 4.1306 -2.5795 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.1119 0.7930 0.7706 N 0 0 0 0 0 0 0 0 0 0 0 0
-7.4316 0.1377 0.8364 C 0 0 2 0 0 0 0 0 0 0 0 0
-8.4392 1.2692 0.5191 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.0606 2.4428 0.4303 O 0 0 0 0 0 0 0 0 0 0 0 0
-7.6541 -0.4771 2.2247 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.4683 -1.7522 2.1820 C 0 0 0 0 0 0 0 0 0 0 0 0
-7.9303 -2.9225 1.6211 C 0 0 0 0 0 0 0 0 0 0 0 0
-9.7728 -1.7865 2.6868 C 0 0 0 0 0 0 0 0 0 0 0 0
-8.6946 -4.0891 1.5528 C 0 0 0 0 0 0 0 0 0 0 0 0
-10.5381 -2.9484 2.6067 C 0 0 0 0 0 0 0 0 0 0 0 0
-9.9990 -4.1032 2.0410 C 0 0 0 0 0 0 0 0 0 0 0 0
-9.7264 0.8499 0.2833 N 0 0 0 0 0 0 0 0 0 0 0 0
-10.8498 1.8095 0.2357 C 0 0 2 0 0 0 0 0 0 0 0 0
-11.5928 1.9683 1.6059 C 0 0 0 0 0 0 0 0 0 0 0 0
-12.6352 2.6798 1.5964 O 0 0 0 0 0 1 0 0 0 0 0 0
-11.7800 1.4936 -0.9440 C 0 0 0 0 0 0 0 0 0 0 0 0
-12.2716 0.0336 -1.0747 C 0 0 0 0 0 0 0 0 0 0 0 0
-13.0871 -0.1090 -2.3653 C 0 0 0 0 0 0 0 0 0 0 0 0
-13.1086 -0.4348 0.1142 C 0 0 0 0 0 0 0 0 0 0 0 0
-11.0714 1.3310 2.5727 O 0 0 0 0 0 0 0 0 0 0 0 0
7.1116 1.8378 2.8459 H 0 0 0 0 0 0 0 0 0 0 0 0
7.3030 0.5727 3.8805 H 0 0 0 0 0 0 0 0 0 0 0 0
8.4319 1.8128 3.8635 H 0 0 0 0 0 0 0 0 0 0 0 0
9.1894 1.3109 1.7186 H 0 0 0 0 0 0 0 0 0 0 0 0
8.7877 -1.5110 2.8698 H 0 0 0 0 0 0 0 0 0 0 0 0
9.6961 -0.3515 3.8186 H 0 0 0 0 0 0 0 0 0 0 0 0
11.1309 -1.8332 2.3715 H 0 0 0 0 0 0 0 0 0 0 0 0
10.4079 -1.1052 0.9277 H 0 0 0 0 0 0 0 0 0 0 0 0
12.9415 -0.8250 0.3412 H 0 0 0 0 0 0 0 0 0 0 0 0
12.0511 0.5881 -0.3005 H 0 0 0 0 0 0 0 0 0 0 0 0
13.6180 0.8068 0.5078 H 0 0 0 0 0 0 0 0 0 0 0 0
8.3823 -1.7264 0.6198 H 0 0 0 0 0 0 0 0 0 0 0 0
6.4988 -0.4657 -1.2320 H 0 0 0 0 0 0 0 0 0 0 0 0
7.5816 -3.3340 -1.2873 H 0 0 0 0 0 0 0 0 0 0 0 0
6.8738 -2.4463 -2.6268 H 0 0 0 0 0 0 0 0 0 0 0 0
10.2346 -3.5417 -1.5287 H 0 0 0 0 0 0 0 0 0 0 0 0
12.0360 -2.1131 -2.5233 H 0 0 0 0 0 0 0 0 0 0 0 0
7.3885 0.5010 -3.1794 H 0 0 0 0 0 0 0 0 0 0 0 0
12.3559 0.4273 -3.6663 H 0 0 0 0 0 0 0 0 0 0 0 0
8.5743 2.4036 -4.2081 H 0 0 0 0 0 0 0 0 0 0 0 0
11.0298 2.3793 -4.4450 H 0 0 0 0 0 0 0 0 0 0 0 0
5.1234 -0.3233 0.8342 H 0 0 0 0 0 0 0 0 0 0 0 0
2.9967 -2.2400 0.4575 H 0 0 0 0 0 0 0 0 0 0 0 0
3.7031 -3.3617 2.3831 H 0 0 0 0 0 0 0 0 0 0 0 0
2.3693 -2.3528 2.8791 H 0 0 0 0 0 0 0 0 0 0 0 0
3.8334 -2.2578 4.6427 H 0 0 0 0 0 0 0 0 0 0 0 0
5.7892 -3.3156 3.5248 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2597 -1.7372 2.8748 H 0 0 0 0 0 0 0 0 0 0 0 0
6.2305 -1.9981 4.6157 H 0 0 0 0 0 0 0 0 0 0 0 0
4.6117 0.2882 3.1356 H 0 0 0 0 0 0 0 0 0 0 0 0
3.1351 0.0469 4.0963 H 0 0 0 0 0 0 0 0 0 0 0 0
4.7150 0.0106 4.8720 H 0 0 0 0 0 0 0 0 0 0 0 0
3.4460 0.1402 -0.6408 H 0 0 0 0 0 0 0 0 0 0 0 0
1.4983 2.0102 0.6495 H 0 0 0 0 0 0 0 0 0 0 0 0
3.8787 2.5515 -1.1535 H 0 0 0 0 0 0 0 0 0 0 0 0
2.4049 3.4486 -1.4815 H 0 0 0 0 0 0 0 0 0 0 0 0
2.3287 4.3555 0.7793 H 0 0 0 0 0 0 0 0 0 0 0 0
3.5785 5.5614 -0.9997 H 0 0 0 0 0 0 0 0 0 0 0 0
5.0720 4.7191 -0.5407 H 0 0 0 0 0 0 0 0 0 0 0 0
4.2985 5.8460 0.5913 H 0 0 0 0 0 0 0 0 0 0 0 0
4.2752 4.0925 2.3381 H 0 0 0 0 0 0 0 0 0 0 0 0
3.3875 2.5871 2.1277 H 0 0 0 0 0 0 0 0 0 0 0 0
4.9325 2.8270 1.2880 H 0 0 0 0 0 0 0 0 0 0 0 0
0.2593 0.0599 0.1783 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.9630 0.2802 -2.5096 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4725 -2.2004 -0.8104 H 0 0 0 0 0 0 0 0 0 0 0 0
0.0850 -2.1221 -1.6262 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.1849 -1.6473 -3.8180 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0535 -3.7866 -3.3020 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5505 -4.0630 -4.1958 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4961 -4.3718 -2.4476 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.5336 -2.7988 -2.2124 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4905 -2.5073 -3.9567 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4368 -1.1499 -2.8493 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2161 0.8070 -2.1792 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.7386 1.8245 0.5571 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.1905 3.4240 -0.2378 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.8589 3.5032 -1.3718 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.5760 2.1598 -1.8558 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.2088 2.5005 -3.7608 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.9909 0.9823 -3.2648 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.8597 2.1232 -4.2804 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.0055 4.0625 -3.3456 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.6647 4.6351 -1.7099 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.4207 4.7588 -2.9700 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1454 1.7606 1.0858 H 0 0 0 0 0 0 0 0 0 0 0 0
-7.4973 -0.6053 0.0331 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.6867 -0.7352 2.6831 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.1226 0.2508 2.8998 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9179 -2.9223 1.2244 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.2150 -0.8928 3.1322 H 0 0 0 0 0 0 0 0 0 0 0 0
-8.2710 -4.9904 1.1132 H 0 0 0 0 0 0 0 0 0 0 0 0
-11.5565 -2.9430 2.9845 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.5973 -5.0059 1.9733 H 0 0 0 0 0 0 0 0 0 0 0 0
-9.9981 -0.0001 0.7693 H 0 0 0 0 0 0 0 0 0 0 0 0
-10.4314 2.8060 0.0481 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.6483 2.1674 -0.9247 H 0 0 0 0 0 0 0 0 0 0 0 0
-11.2346 1.7419 -1.8642 H 0 0 0 0 0 0 0 0 0 0 0 0
-11.4036 -0.6313 -1.1668 H 0 0 0 0 0 0 0 0 0 0 0 0
-13.4156 -1.1436 -2.5093 H 0 0 0 0 0 0 0 0 0 0 0 0
-13.9758 0.5344 -2.3485 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.4859 0.1736 -3.2360 H 0 0 0 0 0 0 0 0 0 0 0 0
-13.5580 -1.4141 -0.0841 H 0 0 0 0 0 0 0 0 0 0 0 0
-12.4935 -0.5425 1.0108 H 0 0 0 0 0 0 0 0 0 0 0 0
-13.9214 0.2677 0.3328 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 1 0
2 5 1 0
3 4 2 0
3 9 1 0
5 6 1 0
6 7 1 0
7 8 1 0
9 10 1 0
10 11 1 0
10 13 1 0
11 12 2 0
11 23 1 0
13 14 1 0
14 15 2 0
14 16 1 0
15 17 1 0
16 18 2 0
16 19 1 0
17 18 1 0
18 20 1 0
19 21 2 0
20 22 2 0
21 22 1 0
23 24 1 0
24 25 1 0
24 27 1 0
25 26 2 0
25 31 1 0
27 28 1 0
28 29 1 0
28 30 1 0
31 32 1 0
32 33 1 0
32 35 1 0
33 34 2 0
33 39 1 0
35 36 1 0
36 37 1 0
36 38 1 0
39 40 1 0
40 41 1 0
40 43 1 0
41 42 2 0
41 47 1 0
43 44 1 0
44 45 1 0
44 46 1 0
47 48 1 0
48 49 1 0
48 51 1 0
49 50 2 0
49 55 1 0
51 52 1 0
52 53 1 0
52 54 1 0
55 56 1 0
56 57 1 0
56 59 1 0
57 58 2 0
57 66 1 0
59 60 1 0
60 61 2 0
60 62 1 0
61 63 1 0
62 64 2 0
63 65 2 0
64 65 1 0
66 67 1 0
67 68 1 0
67 70 1 0
68 69 1 0
68 74 2 0
70 71 1 0
71 72 1 0
71 73 1 0
1 75 1 0
1 76 1 0
1 77 1 0
2 78 1 6
5 79 1 0
5 80 1 0
6 81 1 0
6 82 1 0
8 83 1 0
8 84 1 0
8 85 1 0
9 86 1 0
10 87 1 6
13 88 1 0
13 89 1 0
15 90 1 0
17 91 1 0
19 92 1 0
20 93 1 0
21 94 1 0
22 95 1 0
23 96 1 0
24 97 1 6
27 98 1 0
27 99 1 0
28100 1 0
29101 1 0
29102 1 0
29103 1 0
30104 1 0
30105 1 0
30106 1 0
31107 1 0
32108 1 1
35109 1 0
35110 1 0
36111 1 0
37112 1 0
37113 1 0
37114 1 0
38115 1 0
38116 1 0
38117 1 0
39118 1 0
40119 1 6
43120 1 0
43121 1 0
44122 1 0
45123 1 0
45124 1 0
45125 1 0
46126 1 0
46127 1 0
46128 1 0
47129 1 0
48130 1 1
51131 1 0
51132 1 0
52133 1 0
53134 1 0
53135 1 0
53136 1 0
54137 1 0
54138 1 0
54139 1 0
55140 1 0
56141 1 6
59142 1 0
59143 1 0
61144 1 0
62145 1 0
63146 1 0
64147 1 0
65148 1 0
66149 1 0
67150 1 6
70151 1 0
70152 1 0
71153 1 0
72154 1 0
72155 1 0
72156 1 0
73157 1 0
73158 1 0
73159 1 0
M CHG 2 1 1 69 -1
M END
> <_TriposChargeType> (1)
GAST_HUCK
$$$$