Upload 205 files
Browse filesThis view is limited to 50 files because it contains too many changes.
See raw diff
- .gitattributes +117 -0
- sample_wsis/CMU-1-Small-Region-Level-0.ome.tiff +3 -0
- sample_wsis/CMU-1-Small-Region-Pyramid.ome.tif +3 -0
- sample_wsis/CMU-1-Small-Region.deflate.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.dicom.zip +3 -0
- sample_wsis/CMU-1-Small-Region.jp2k.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.jpeg.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.lwebp.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.ome.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.omnyx.jp2 +3 -0
- sample_wsis/CMU-1-Small-Region.svs +3 -0
- sample_wsis/CMU-1-Small-Region.webp.tiff +3 -0
- sample_wsis/CMU-1-Small-Region.zarr.zip +3 -0
- sample_wsis/CMU-1-Small-Region.zarr.zip.backup +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/.zattrs +139 -0
- sample_wsis/CMU-1-Small-Region.zarr/.zgroup +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/.zarray +25 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/0/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/1/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/2/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/3/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/4/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/5/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/6/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/7/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/0/8/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/0/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/1/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/2/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/3/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/4/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/5/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/6/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/7/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/1/8/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/0/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/1/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/2/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/3/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/4/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/5/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/6/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/7/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/10/8/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/0/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/1/0 +0 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/2/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/3/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/4/0 +3 -0
- sample_wsis/CMU-1-Small-Region.zarr/0/11/5/0 +3 -0
.gitattributes
CHANGED
|
@@ -57,3 +57,120 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
|
| 57 |
# Video files - compressed
|
| 58 |
*.mp4 filter=lfs diff=lfs merge=lfs -text
|
| 59 |
*.webm filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 57 |
# Video files - compressed
|
| 58 |
*.mp4 filter=lfs diff=lfs merge=lfs -text
|
| 59 |
*.webm filter=lfs diff=lfs merge=lfs -text
|
| 60 |
+
sample_wsis/bioformatspull2759.ndpi filter=lfs diff=lfs merge=lfs -text
|
| 61 |
+
sample_wsis/breast_sample_wsi.svs filter=lfs diff=lfs merge=lfs -text
|
| 62 |
+
sample_wsis/CMU-1-Small-Region-Pyramid.ome.tif filter=lfs diff=lfs merge=lfs -text
|
| 63 |
+
sample_wsis/CMU-1-Small-Region.omnyx.jp2 filter=lfs diff=lfs merge=lfs -text
|
| 64 |
+
sample_wsis/CMU-1-Small-Region.svs filter=lfs diff=lfs merge=lfs -text
|
| 65 |
+
sample_wsis/CMU-1-Small-Region.zarr.zip.backup filter=lfs diff=lfs merge=lfs -text
|
| 66 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/0/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 67 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/1/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 68 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/1/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 69 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/1/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 70 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/10/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 71 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/10/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 72 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/10/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 73 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/10/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 74 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/10/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 75 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/11/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 76 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/11/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 77 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/11/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 78 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/11/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 79 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/11/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 80 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/2/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 81 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/2/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 82 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/3/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 83 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/3/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 84 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/3/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 85 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/3/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 86 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/4/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 87 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/4/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 88 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/4/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 89 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/4/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 90 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/5/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 91 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/5/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 92 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/5/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 93 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/5/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 94 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/6/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 95 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/6/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 96 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/6/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 97 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/7/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 98 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/7/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 99 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/7/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 100 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/7/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 101 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/8/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 102 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/8/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 103 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/8/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 104 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/8/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 105 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/9/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 106 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/9/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 107 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/9/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 108 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/9/5/0 filter=lfs diff=lfs merge=lfs -text
|
| 109 |
+
sample_wsis/CMU-1-Small-Region.zarr/0/9/6/0 filter=lfs diff=lfs merge=lfs -text
|
| 110 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 111 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/0/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 112 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/0/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 113 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/0/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 114 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/0/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 115 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/1/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 116 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/1/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 117 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/1/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 118 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/1/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 119 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/1/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 120 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/2/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 121 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/2/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 122 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/2/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 123 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/2/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 124 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/2/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 125 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/3/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 126 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/3/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 127 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/3/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 128 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/3/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 129 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/3/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 130 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/4/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 131 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/4/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 132 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/4/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 133 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/4/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 134 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/4/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 135 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/5/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 136 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/5/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 137 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/5/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 138 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/5/3/0 filter=lfs diff=lfs merge=lfs -text
|
| 139 |
+
sample_wsis/CMU-1-Small-Region.zarr/1/5/4/0 filter=lfs diff=lfs merge=lfs -text
|
| 140 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 141 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/0/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 142 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/0/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 143 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/1/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 144 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/1/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 145 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/1/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 146 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/2/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 147 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/2/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 148 |
+
sample_wsis/CMU-1-Small-Region.zarr/2/2/2/0 filter=lfs diff=lfs merge=lfs -text
|
| 149 |
+
sample_wsis/CMU-1-Small-Region.zarr/3/0/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 150 |
+
sample_wsis/CMU-1-Small-Region.zarr/3/0/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 151 |
+
sample_wsis/CMU-1-Small-Region.zarr/3/1/0/0 filter=lfs diff=lfs merge=lfs -text
|
| 152 |
+
sample_wsis/CMU-1-Small-Region.zarr/3/1/1/0 filter=lfs diff=lfs merge=lfs -text
|
| 153 |
+
sample_wsis/CMU-1-Small-Region/1.2.826.0.1.3680043.8.498.35220404935377466417110411569853018212.dcm filter=lfs diff=lfs merge=lfs -text
|
| 154 |
+
sample_wsis/CMU-1.ndpi filter=lfs diff=lfs merge=lfs -text
|
| 155 |
+
sample_wsis/CMU-1.svs filter=lfs diff=lfs merge=lfs -text
|
| 156 |
+
sample_wsis/CMU-1/1.2.826.0.1.3680043.8.498.10811696217927476265395957131891692662.dcm filter=lfs diff=lfs merge=lfs -text
|
| 157 |
+
sample_wsis/CMU-1/1.2.826.0.1.3680043.8.498.30995189936828127975228531869266326664.dcm filter=lfs diff=lfs merge=lfs -text
|
| 158 |
+
sample_wsis/CMU-1/1.2.826.0.1.3680043.8.498.86189911353898613581992297339049893262.dcm filter=lfs diff=lfs merge=lfs -text
|
| 159 |
+
sample_wsis/CMU-mini_002.svs filter=lfs diff=lfs merge=lfs -text
|
| 160 |
+
sample_wsis/multiplex_example_small.qptiff filter=lfs diff=lfs merge=lfs -text
|
| 161 |
+
sample_wsis/multiplex_example.qptiff filter=lfs diff=lfs merge=lfs -text
|
| 162 |
+
sample_wsis/PCA-mini.svs filter=lfs diff=lfs merge=lfs -text
|
| 163 |
+
sample_wsis/sample-regular.tif filter=lfs diff=lfs merge=lfs -text
|
| 164 |
+
sample_wsis/TCGA-3L-AA1B-01Z-00-DX1.8923A151-A690-40B7-9E5A-FCBEDFC2394F.svs filter=lfs diff=lfs merge=lfs -text
|
| 165 |
+
sample_wsis/TCGA-4T-AA8H-01Z-00-DX1.A46C759C-74A2-4724-B6B5-DECA0D16E029.svs filter=lfs diff=lfs merge=lfs -text
|
| 166 |
+
sample_wsis/TCGA-AA-3534-01Z-00-DX1.a49495e0-93b2-41fa-9229-6375533578b5.svs filter=lfs diff=lfs merge=lfs -text
|
| 167 |
+
sample_wsis/TCGA-AD-6964-01Z-00-DX1.83AF88B9-C59B-48C6-A739-85ACB8F8ECA9.svs filter=lfs diff=lfs merge=lfs -text
|
| 168 |
+
sample_wsis/TCGA-AZ-4615-01Z-00-DX1.ecabbbb1-c1ed-4f60-b44f-b07eaa177208.svs filter=lfs diff=lfs merge=lfs -text
|
| 169 |
+
sample_wsis/TCGA-AZ-6598-01Z-00-DX1.1fc4cd61-4524-413b-b36d-ad438785bc06.svs filter=lfs diff=lfs merge=lfs -text
|
| 170 |
+
sample_wsis/TCGA-BH-A0B5-01Z-00-DX1.742DB0E8-8EB1-47C8-B698-8E2438FB6299.svs filter=lfs diff=lfs merge=lfs -text
|
| 171 |
+
sample_wsis/TCGA-CA-6715-01Z-00-DX1.d5db8085-f91a-4eee-b15f-61960af713af.svs filter=lfs diff=lfs merge=lfs -text
|
| 172 |
+
sample_wsis/TCGA-F4-6854-01Z-00-DX1.a4d18769-1632-41e4-b49d-4a88d36e21ab.svs filter=lfs diff=lfs merge=lfs -text
|
| 173 |
+
sample_wsis/test1.jp2 filter=lfs diff=lfs merge=lfs -text
|
| 174 |
+
sample_wsis/ventana-sample.tif filter=lfs diff=lfs merge=lfs -text
|
| 175 |
+
sample_wsis/wsi_2000x2000_blur.svs filter=lfs diff=lfs merge=lfs -text
|
| 176 |
+
sample_wsis/wsi4_12k_12k.svs filter=lfs diff=lfs merge=lfs -text
|
sample_wsis/CMU-1-Small-Region-Level-0.ome.tiff
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region-Pyramid.ome.tif
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.deflate.tiff
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.dicom.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6dbb6b072e5efe56e8b95cb76adebd76ca72e069ed4699973f66d24526b37426
|
| 3 |
+
size 1161505
|
sample_wsis/CMU-1-Small-Region.jp2k.tiff
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.jpeg.tiff
ADDED
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.lwebp.tiff
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.ome.tiff
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.omnyx.jp2
ADDED
|
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.svs
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ed92d5a9f2e86df67640d6f92ce3e231419ce127131697fbbce42ad5e002c8a7
|
| 3 |
+
size 1938955
|
sample_wsis/CMU-1-Small-Region.webp.tiff
ADDED
|
Git LFS Details
|
sample_wsis/CMU-1-Small-Region.zarr.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c99c1a586571f30555f4ffae1a73ac3f6bc6e817f940c46de50bf2edd8389070
|
| 3 |
+
size 11727980
|
sample_wsis/CMU-1-Small-Region.zarr.zip.backup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:135b95faac3ec747e1bc061c9a642998b97f7746430534992c63612bb47d65dd
|
| 3 |
+
size 11720147
|
sample_wsis/CMU-1-Small-Region.zarr/.zattrs
ADDED
|
@@ -0,0 +1,139 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"_ARRAY_DIMENSIONS": [
|
| 3 |
+
"y",
|
| 4 |
+
"x",
|
| 5 |
+
"c"
|
| 6 |
+
],
|
| 7 |
+
"_creator": {
|
| 8 |
+
"name": "wsic",
|
| 9 |
+
"version": "0.2.0"
|
| 10 |
+
},
|
| 11 |
+
"multiscales": [
|
| 12 |
+
{
|
| 13 |
+
"axes": [
|
| 14 |
+
{
|
| 15 |
+
"name": "y",
|
| 16 |
+
"type": "space",
|
| 17 |
+
"unit": "micronmeter"
|
| 18 |
+
},
|
| 19 |
+
{
|
| 20 |
+
"name": "x",
|
| 21 |
+
"type": "space",
|
| 22 |
+
"unit": "micronmeter"
|
| 23 |
+
},
|
| 24 |
+
{
|
| 25 |
+
"name": "c",
|
| 26 |
+
"type": "channel"
|
| 27 |
+
}
|
| 28 |
+
],
|
| 29 |
+
"datasets": [
|
| 30 |
+
{
|
| 31 |
+
"coordinateTransformations": [
|
| 32 |
+
{
|
| 33 |
+
"scale": [
|
| 34 |
+
0.5,
|
| 35 |
+
0.5,
|
| 36 |
+
1
|
| 37 |
+
],
|
| 38 |
+
"type": "scale"
|
| 39 |
+
}
|
| 40 |
+
],
|
| 41 |
+
"path": "0"
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"coordinateTransformations": [
|
| 45 |
+
{
|
| 46 |
+
"scale": [
|
| 47 |
+
1.0,
|
| 48 |
+
1.0,
|
| 49 |
+
1
|
| 50 |
+
],
|
| 51 |
+
"type": "scale"
|
| 52 |
+
}
|
| 53 |
+
],
|
| 54 |
+
"path": "1"
|
| 55 |
+
},
|
| 56 |
+
{
|
| 57 |
+
"coordinateTransformations": [
|
| 58 |
+
{
|
| 59 |
+
"scale": [
|
| 60 |
+
2.0,
|
| 61 |
+
2.0,
|
| 62 |
+
1
|
| 63 |
+
],
|
| 64 |
+
"type": "scale"
|
| 65 |
+
}
|
| 66 |
+
],
|
| 67 |
+
"path": "2"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"coordinateTransformations": [
|
| 71 |
+
{
|
| 72 |
+
"scale": [
|
| 73 |
+
4.0,
|
| 74 |
+
4.0,
|
| 75 |
+
1
|
| 76 |
+
],
|
| 77 |
+
"type": "scale"
|
| 78 |
+
}
|
| 79 |
+
],
|
| 80 |
+
"path": "3"
|
| 81 |
+
}
|
| 82 |
+
],
|
| 83 |
+
"version": "0.4"
|
| 84 |
+
}
|
| 85 |
+
],
|
| 86 |
+
"omero": {
|
| 87 |
+
"channels": [
|
| 88 |
+
{
|
| 89 |
+
"active": true,
|
| 90 |
+
"coefficient": 1.0,
|
| 91 |
+
"color": "FF0000",
|
| 92 |
+
"family": "linear",
|
| 93 |
+
"inverted": false,
|
| 94 |
+
"label": "Red",
|
| 95 |
+
"window": {
|
| 96 |
+
"end": 255,
|
| 97 |
+
"max": 255,
|
| 98 |
+
"min": 0,
|
| 99 |
+
"start": 0
|
| 100 |
+
}
|
| 101 |
+
},
|
| 102 |
+
{
|
| 103 |
+
"active": true,
|
| 104 |
+
"coefficient": 1.0,
|
| 105 |
+
"color": "00FF00",
|
| 106 |
+
"family": "linear",
|
| 107 |
+
"inverted": false,
|
| 108 |
+
"label": "Green",
|
| 109 |
+
"window": {
|
| 110 |
+
"end": 255,
|
| 111 |
+
"max": 255,
|
| 112 |
+
"min": 0,
|
| 113 |
+
"start": 0
|
| 114 |
+
}
|
| 115 |
+
},
|
| 116 |
+
{
|
| 117 |
+
"active": true,
|
| 118 |
+
"coefficient": 1.0,
|
| 119 |
+
"color": "0000FF",
|
| 120 |
+
"family": "linear",
|
| 121 |
+
"inverted": false,
|
| 122 |
+
"label": "Blue",
|
| 123 |
+
"window": {
|
| 124 |
+
"end": 255,
|
| 125 |
+
"max": 255,
|
| 126 |
+
"min": 0,
|
| 127 |
+
"start": 0
|
| 128 |
+
}
|
| 129 |
+
}
|
| 130 |
+
],
|
| 131 |
+
"id": 1,
|
| 132 |
+
"rdefs": {
|
| 133 |
+
"defaultT": 0,
|
| 134 |
+
"defaultZ": 0,
|
| 135 |
+
"model": "color"
|
| 136 |
+
},
|
| 137 |
+
"version": "0.4"
|
| 138 |
+
}
|
| 139 |
+
}
|
sample_wsis/CMU-1-Small-Region.zarr/.zgroup
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"zarr_format": 2
|
| 3 |
+
}
|
sample_wsis/CMU-1-Small-Region.zarr/0/.zarray
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"chunks": [
|
| 3 |
+
256,
|
| 4 |
+
256,
|
| 5 |
+
4
|
| 6 |
+
],
|
| 7 |
+
"compressor": {
|
| 8 |
+
"blocksize": 0,
|
| 9 |
+
"clevel": 5,
|
| 10 |
+
"cname": "lz4",
|
| 11 |
+
"id": "blosc",
|
| 12 |
+
"shuffle": 1
|
| 13 |
+
},
|
| 14 |
+
"dimension_separator": "/",
|
| 15 |
+
"dtype": "|u1",
|
| 16 |
+
"fill_value": 0,
|
| 17 |
+
"filters": null,
|
| 18 |
+
"order": "C",
|
| 19 |
+
"shape": [
|
| 20 |
+
2967,
|
| 21 |
+
2220,
|
| 22 |
+
4
|
| 23 |
+
],
|
| 24 |
+
"zarr_format": 2
|
| 25 |
+
}
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/0/0
ADDED
|
Binary file (28.8 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/1/0
ADDED
|
Binary file (7.3 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/2/0
ADDED
|
Binary file (7.42 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/3/0
ADDED
|
Binary file (89 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/4/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:278e7c1845f58b64d76eadee6966b8e1a791e32349a97859a4d88c0f9b4c3c5d
|
| 3 |
+
size 132474
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/5/0
ADDED
|
Binary file (21.8 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/6/0
ADDED
|
Binary file (6.14 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/7/0
ADDED
|
Binary file (6.33 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/0/8/0
ADDED
|
Binary file (3.7 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/0/0
ADDED
|
Binary file (11.5 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/1/0
ADDED
|
Binary file (10.5 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/2/0
ADDED
|
Binary file (12.6 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/3/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7af7c6831b28d68f9d79ed11c624e4525d0f79e36601f9df1c437c8d434f709a
|
| 3 |
+
size 129501
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/4/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9a9d6080fd4d254edf92a584adafcbfa263659908e8eabc72c63502427db4d36
|
| 3 |
+
size 203648
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/5/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:de37881857f461ba05a698170cd270fe560b26804aecbe5573154c21671dd5e4
|
| 3 |
+
size 135871
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/6/0
ADDED
|
Binary file (16.8 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/7/0
ADDED
|
Binary file (8.41 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/1/8/0
ADDED
|
Binary file (6.35 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/0/0
ADDED
|
Binary file (7.27 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/1/0
ADDED
|
Binary file (9.8 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/2/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:06db37b9f5a3d03337f81293fb34dea4338dff5e7350403ac382e49a5cfc54ed
|
| 3 |
+
size 242777
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/3/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4a10be2c97c74a2a8bfcc2c44c41dcbcf257fd0f99c85e57c74ed3fdae0d11af
|
| 3 |
+
size 262160
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/4/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:209cec211eb97e73781491c0a3436faf68bdaedced709a9720d60be2d2db76f2
|
| 3 |
+
size 260503
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/5/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d69628d6fc0121696410469a48cbdf96f9d0a67bddf37eedf39124d1d3b842ba
|
| 3 |
+
size 262160
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/6/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:871ae9cb88308d072eb13a38160705a29902413dc99c6c8cd64bd02b9a7e8146
|
| 3 |
+
size 223545
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/7/0
ADDED
|
Binary file (9.96 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/10/8/0
ADDED
|
Binary file (5.26 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/0/0
ADDED
|
Binary file (2.64 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/1/0
ADDED
|
Binary file (4.61 kB). View file
|
|
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/2/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0ba9f537d9b5320638e61707a82cae5c0c21ab3524e3c45ba7468de85b0a90be
|
| 3 |
+
size 152461
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/3/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a5223e496ff36cde5739151b66235bb9e60f633edcd6159f7613773ed35cf7ac
|
| 3 |
+
size 155208
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/4/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:84382e2f9486010a07bb77474e79f14fcb5a554c4b2fac700d09878930cfc85d
|
| 3 |
+
size 150155
|
sample_wsis/CMU-1-Small-Region.zarr/0/11/5/0
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c97e0f399ecc0ae41c5b7b97327f3875848f5624d535523381a62587467f745c
|
| 3 |
+
size 153726
|