Datasets:
TabBioMed camera-ready release
Browse files- README.md +72 -0
- data/test.parquet +3 -0
- data/train.parquet +3 -0
- data/val.parquet +3 -0
- feature_names.json +67 -0
- metadata.json +43 -0
README.md
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---
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license: cc-by-4.0
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pretty_name: MUSIC
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task_categories:
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- tabular-classification
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tags:
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- tabular
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- biomedical
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- benchmark
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- TabBioMed
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- clinical-&-healthcare
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- classification
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size_categories:
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- n<1K
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configs:
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- config_name: default
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data_files:
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- split: train
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path: data/train.parquet
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- split: validation
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path: data/val.parquet
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- split: test
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path: data/test.parquet
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---
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# MUSIC
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Part of **TabBioMed** (*TabBioMed: A Large-Scale Benchmark for Biomedical Tabular Learning*), a benchmark of 94 curated biomedical
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tabular datasets. Code, preprocessing and documentation: https://github.com/AI-sandbox/TabBioMed.
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MUSIC cause-of-death classification. Eleven patients lost to follow-up (exit code 1) and twenty heart-transplant patients (exit code 2) are excluded because no cause of death was observed. Class 0 is alive at the end of follow-up. Cause codes 1, 3, and 6/7 map to classes 1, 2, and 3.
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| Domain | Task | Samples | Features | Classes |
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|---|---|---|---|---|
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| Clinical & Healthcare | classification | 961 | 65 | 4 |
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**Splits.** Fixed train/val/test split (672/144/145 rows).
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## Files
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- `data/**.parquet`: one row per sample. `row_idx` is the row index in the original
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TabBioMed array; `f_<i>[_<name>]` are the features (in order); `target` (or `target_<j>`
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for multi-target tasks) is the label. Categorical feature indices (0-based, among the
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features): `[1, 8, 9, 10, 11, 12, 40, 43, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 7, 13, 14, 15, 46, 47]`. Missing values are stored as nulls.
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- `metadata.json`: TabBioMed task metadata (task type, categorical indices, source, description).
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- `feature_names.json`: original feature names, in column order.
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```python
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from datasets import load_dataset
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ds = load_dataset("TabBioMed/MUSIC")
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```
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A Croissant (1.1) description with Responsible-AI fields is distributed with the
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TabBioMed release.
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## Source and license
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Source: MUSIC
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This derived dataset is distributed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/). Please also
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cite and respect the terms of the original source.
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## Citation
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```bibtex
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@inproceedings{tabbiomed2026,
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title = {TabBioMed: A Large-Scale Benchmark for Biomedical Tabular Learning},
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author = {Mateo Bernad{\'o}, Pau and Polapragada, Saivenkata Nagavyjayanthi and Bonet, David and Arbiol Rakuljic, Pol and Mogas Pladevall, Laia and Comajoan Cara, Mar{\c{c}}al and Gonzalez Ferrer, Jesus and Abante, Jordi and Mas Montserrat, Daniel and Haussler, David and Ioannidis, Alexander G.},
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booktitle = {Advances in Neural Information Processing Systems (NeurIPS), Evaluations and Datasets Track},
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year = {2026}
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}
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```
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data/test.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:2aaf4f6d62c0ea2e670f3ad9425c4ae7a3d42ea0b44dc5ab80aef71b79b0c729
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size 60905
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data/train.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:66531295407ca35c50ade608bc573129c8aac3a4305a005f736061dcad5a9e5c
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size 92490
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data/val.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:bb8c1b5bcf3a68838c48462c6d4bfb8678489920a7c0ba6e792adeff1ab9399b
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size 60176
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feature_names.json
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[
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"Age",
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"Gender (male=1)",
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"Weight (kg)",
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"Height (cm)",
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"NYHA class",
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"Diastolic blood pressure (mmHg)",
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"Systolic blood pressure (mmHg)",
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"HF etiology - Diagnosis",
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"Diabetes (yes=1)",
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"History of dyslipemia (yes=1)",
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"Peripheral vascular disease (yes=1)",
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"History of hypertension (yes=1)",
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"Prior Myocardial Infarction (yes=1)",
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"Prior implantable device",
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"Prior Revascularization",
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"Syncope",
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"daily smoking (cigarretes/day)",
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"smoke-free time (years)",
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"cigarettes /year",
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"alcohol consumption (standard units)",
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"Albumin (g/L)",
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"ALT or GPT (IU/L)",
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"AST or GOT (IU/L)",
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"Normalized Troponin",
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"Total Cholesterol (mmol/L)",
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"Creatinine (?mol/L)",
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"Gamma-glutamil transpeptidase (IU/L)",
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"Glucose (mmol/L)",
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"Hemoglobin (g/L)",
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"HDL (mmol/L)",
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"Potassium (mEq/L)",
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"LDL (mmol/L)",
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"Sodium (mEq/L)",
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"Pro-BNP (ng/L)",
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"Protein (g/L)",
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"T3 (pg/dL)",
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"T4 (ng/L)",
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"Troponin (ng/mL)",
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"TSH (mIU/L)",
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"Urea (mg/dL)",
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"Signs of pulmonary venous hypertension (yes=1)",
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"Cardiothoracic ratio",
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"Left atrial size (mm)",
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"Right ventricle contractility (altered=1)",
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"Right ventricle end-diastolic diameter (mm)",
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"LVEF (%)",
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"Mitral valve insufficiency",
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"Mitral flow pattern",
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"Left ventricular posterior wall thickness (mm)",
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"Septal thickness (mm)",
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"Left ventricle end-diastolic diameter (mm)",
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"Left ventricle end-systolic diameter (mm)",
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"Calcium channel blocker (yes=1)",
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"Diabetes medication (yes=1)",
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"Amiodarone (yes=1)",
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"Angiotensin-II receptor blocker (yes=1)",
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"Anticoagulants/antitrombotics (yes=1)",
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"Betablockers (yes=1)",
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"Digoxin (yes=1)",
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"Loop diuretics (yes=1)",
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"Spironolactone (yes=1)",
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"Statins (yes=1)",
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"Hidralazina (yes=1)",
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"ACE inhibitor (yes=1)",
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"Nitrovasodilator (yes=1)"
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]
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metadata.json
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{
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"READY": true,
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"name": "MUSIC",
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"task": "classification",
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"num_classes": 4,
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"cat_idx": [
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1,
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8,
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46,
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47
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],
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"num_samples": 961,
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"num_features": 65,
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"imbalance_ratio": 11.3934,
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"description": "MUSIC cause-of-death classification. Eleven patients lost to follow-up (exit code 1) and twenty heart-transplant patients (exit code 2) are excluded because no cause of death was observed. Class 0 is alive at the end of follow-up. Cause codes 1, 3, and 6/7 map to classes 1, 2, and 3.",
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"source": "MUSIC",
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"note": "Excluded exit code 1 (lost to follow-up, n=11) and exit code 2 (heart transplant, n=20). Follow-up length and the exit code are not features.",
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"label": "clinical & healthcare",
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"curation_protocol": "music_resolved_outcomes_v1"
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}
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