pca_50k / metadata.json
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{
"READY": true,
"name": "pca_50k",
"task": "multiregression",
"cat_idx": [],
"num_samples": 2609,
"num_features": 34635,
"description": "This dataset contains genotypes from chromosome chr22 for a subset of samples from the 1000 Genomes Project and HGDP. For this specific dataset, 50k SNPs at random positions were selected from the original sequences and missing values where introduced with a probability of 0%. The task is to predict the first 3 PCA coordinates of each sample based on the genotypes.",
"source": "Chromosome data was downloaded from GnomAD v3.1.2 - 1KG + HGDP callset: https://gnomad.broadinstitute.org/downloads#v3-hgdp-1kg. PCA coordinates were computed utilizing the 300,000 most informative SNPs from chromosomes chr1-chr22. ",
"label": "genomics"
}