Datasets:
File size: 1,331 Bytes
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"name": "sc_muris_celltype",
"task": "classification",
"num_classes": 9,
"classes": [
"B cell",
"T cell",
"epithelial cell of proximal tubule",
"fenestrated endothelial cell",
"kidney collecting duct epithelial cell",
"kidney collecting duct principal cell",
"kidney loop of Henle ascending limb epithelial cell",
"macrophage",
"mesangial cell"
],
"num_samples": 1817,
"num_features": 16472,
"cat_idx": [],
"label": "Single-Cell",
"sub_labels": [
"RNA-seq"
],
"description": "Classify nine released kidney cell-type annotations from Tabula Muris Senis Smart-seq2 expression.",
"source": "Tabula Muris Consortium (2020), Tabula Muris Senis kidney Smart-seq2 via scUnified",
"source_url": "https://github.com/XPgogogo/scUnified/blob/main/Tabula_Muris_kidney_filtered.h5ad",
"publication_doi": "10.1038/s41586-020-2496-1",
"split_strategy": "fixed",
"split_unit": "cell",
"curation_protocol": "singlecell_source_annotations_cell_split_v1",
"source_manifest_sha256": "d44877b86813d101d473dfaae4caf699a00fbabebdc36bb540d106c685f10310",
"feature_representation": "source_raw_counts",
"feature_selection": "training_nonconstant_genes",
"sample_metadata_file": "sample_metadata.csv",
"feature_metadata_file": "feature_metadata.csv",
"READY": true
}
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