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  1. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/_tabpfgen_generate.py +122 -0
  2. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/gen_20260505_031455.log +3 -0
  3. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/input_snapshot.json +3 -0
  4. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/public_gate/normalized_schema_snapshot.json +3 -0
  5. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/public_gate/public_gate_report.json +3 -0
  6. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/public_gate/staged_input_manifest.json +3 -0
  7. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/run_config.json +3 -0
  8. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/runtime_result.json +3 -0
  9. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/public/staged_features.json +3 -0
  10. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/public/test.csv +3 -0
  11. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/public/train.csv +3 -0
  12. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/public/val.csv +3 -0
  13. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/tabpfgen/adapter_report.json +3 -0
  14. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/tabpfgen/adapter_transforms_applied.json +3 -0
  15. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/tabpfgen/model_input_manifest.json +3 -0
  16. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/tabpfgen-n3-3918-20260505_031455.csv +3 -0
  17. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/tabpfgen_meta.json +3 -0
  18. syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/train_20260505_031455.log +3 -0
syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/_tabpfgen_generate.py ADDED
@@ -0,0 +1,122 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ import os
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+ import numpy as np
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+ import pandas as pd
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+ import json
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+ from tabpfgen import TabPFGen
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+
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+ df = pd.read_csv("/work/output-Benchmark-trainonly-v1/n3/tabpfgen/tabpfgen-n3-20260505_031455/staged/public/train.csv")
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+ target_col = "quality"
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+
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+ target_missing = df[target_col].isna()
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+ if target_missing.any():
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+ dropped = int(target_missing.sum())
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+ df = df.loc[~target_missing].copy()
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+ print(
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+ f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
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+ )
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+ if df.empty:
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+ raise ValueError(
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+ f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
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+ )
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+
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+ feature_cols = [c for c in df.columns if c != target_col]
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+
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+ cat_encodings = {}
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+ for col in feature_cols:
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+ if df[col].dtype == object or str(df[col].dtype) == 'category':
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+ cats = sorted(df[col].dropna().unique().tolist(), key=str)
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+ cat_map = {v: i for i, v in enumerate(cats)}
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+ df[col] = df[col].map(cat_map).astype(float)
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+ cat_encodings[col] = cats
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+ print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
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+
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+ target_cats = None
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+ if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
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+ cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
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+ t_map = {v: i for i, v in enumerate(cats)}
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+ df[target_col] = df[target_col].map(t_map).astype(float)
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+ target_cats = cats
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+ print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
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+
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+ X = df[feature_cols].values.astype(np.float32)
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+ y = df[target_col].values
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+ fit_rows_cap = max(1, int(os.environ.get("TABPFGEN_FIT_MAX_ROWS", "50000")))
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+ if len(X) > fit_rows_cap:
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+ rng = np.random.default_rng(42)
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+ idx = np.sort(rng.choice(len(X), size=fit_rows_cap, replace=False))
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+ X = X[idx]
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+ y = y[idx]
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+ print(f"[TabPFGen] Downsampled fit rows -> {len(X)} (cap={fit_rows_cap})")
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+ target_n = int(3918)
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+
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+ for i in range(X.shape[1]):
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+ col_vals = X[:, i]
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+ mask = np.isnan(col_vals)
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+ if mask.any():
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+ mean_val = np.nanmean(col_vals)
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+ X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
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+
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+ chunk_rows = max(1, int(os.environ.get("TABPFGEN_GEN_CHUNK_ROWS", "256")))
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+ device = (os.environ.get("TABPFGEN_DEVICE") or "auto").strip() or "auto"
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+
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+ # TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
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+ # (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
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+ gen = TabPFGen(
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+ n_sgld_steps=1000,
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+ sgld_step_size=0.01,
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+ sgld_noise_scale=0.01,
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+ device=device,
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+ )
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+
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+ print(f"[TabPFGen] Generating {target_n} rows via generate_classification (chunk_rows={chunk_rows}, device={device})")
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+ x_parts = []
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+ y_parts = []
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+ remaining = target_n
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+ while remaining > 0:
76
+ take = min(chunk_rows, remaining)
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+ X_part, y_part = gen.generate_classification(X, y, n_samples=take)
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+ x_parts.append(np.asarray(X_part))
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+ y_parts.append(np.asarray(y_part))
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+ remaining -= take
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+ print(f"[TabPFGen] chunk done: take={take}, remaining={remaining}")
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+
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+ X_syn = np.concatenate(x_parts, axis=0)
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+ y_syn = np.concatenate(y_parts, axis=0)
85
+
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+ syn_df = pd.DataFrame(X_syn, columns=feature_cols)
87
+ syn_df[target_col] = y_syn
88
+
89
+ for col, cats in cat_encodings.items():
90
+ codes = np.round(syn_df[col].values).astype(int)
91
+ codes = np.clip(codes, 0, len(cats) - 1)
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+ syn_df[col] = [cats[c] for c in codes]
93
+
94
+ if target_cats is not None:
95
+ codes = np.round(syn_df[target_col].values).astype(int)
96
+ codes = np.clip(codes, 0, len(target_cats) - 1)
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+ syn_df[target_col] = [target_cats[c] for c in codes]
98
+
99
+ if len(syn_df) > target_n:
100
+ print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
101
+ syn_df = syn_df.iloc[:target_n].copy()
102
+ elif len(syn_df) < target_n:
103
+ deficit = target_n - len(syn_df)
104
+ print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
105
+ if len(syn_df) > 0:
106
+ extra = syn_df.sample(n=deficit, replace=True, random_state=42)
107
+ syn_df = pd.concat(
108
+ [syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
109
+ ignore_index=True,
110
+ )
111
+ else:
112
+ syn_df = df[feature_cols + [target_col]].sample(
113
+ n=target_n, replace=True, random_state=42
114
+ ).reset_index(drop=True)
115
+
116
+ syn_df = syn_df[list(df.columns)]
117
+ if len(syn_df) != target_n:
118
+ raise RuntimeError(
119
+ f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
120
+ )
121
+ syn_df.to_csv("/work/output-Benchmark-trainonly-v1/n3/tabpfgen/tabpfgen-n3-20260505_031455/tabpfgen-n3-3918-20260505_031455.csv", index=False)
122
+ print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/n3/tabpfgen/tabpfgen-n3-20260505_031455/tabpfgen-n3-3918-20260505_031455.csv")
syntheticSuccess/n3/tabpfgen/tabpfgen-n3-20260505_031455/gen_20260505_031455.log ADDED
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