Add files using upload-large-folder tool
Browse files- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/_tabpfgen_generate.py +100 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/gen_20260501_054310.log +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/input_snapshot.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/runtime_result.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/staged_features.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/test.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/train.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/val.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/adapter_report.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/model_input_manifest.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen-c2-1382-20260501_054310.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen_meta.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/train_20260501_054310.log +3 -0
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/_tabpfgen_generate.py
ADDED
|
@@ -0,0 +1,100 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import os
|
| 2 |
+
import numpy as np
|
| 3 |
+
import pandas as pd
|
| 4 |
+
import json
|
| 5 |
+
from tabpfgen import TabPFGen
|
| 6 |
+
|
| 7 |
+
df = pd.read_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/train.csv")
|
| 8 |
+
target_col = "class"
|
| 9 |
+
|
| 10 |
+
target_missing = df[target_col].isna()
|
| 11 |
+
if target_missing.any():
|
| 12 |
+
dropped = int(target_missing.sum())
|
| 13 |
+
df = df.loc[~target_missing].copy()
|
| 14 |
+
print(
|
| 15 |
+
f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
|
| 16 |
+
)
|
| 17 |
+
if df.empty:
|
| 18 |
+
raise ValueError(
|
| 19 |
+
f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
|
| 20 |
+
)
|
| 21 |
+
|
| 22 |
+
feature_cols = [c for c in df.columns if c != target_col]
|
| 23 |
+
|
| 24 |
+
cat_encodings = {}
|
| 25 |
+
for col in feature_cols:
|
| 26 |
+
if df[col].dtype == object or str(df[col].dtype) == 'category':
|
| 27 |
+
cats = sorted(df[col].dropna().unique().tolist(), key=str)
|
| 28 |
+
cat_map = {v: i for i, v in enumerate(cats)}
|
| 29 |
+
df[col] = df[col].map(cat_map).astype(float)
|
| 30 |
+
cat_encodings[col] = cats
|
| 31 |
+
print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
|
| 32 |
+
|
| 33 |
+
target_cats = None
|
| 34 |
+
if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
|
| 35 |
+
cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
|
| 36 |
+
t_map = {v: i for i, v in enumerate(cats)}
|
| 37 |
+
df[target_col] = df[target_col].map(t_map).astype(float)
|
| 38 |
+
target_cats = cats
|
| 39 |
+
print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
|
| 40 |
+
|
| 41 |
+
X = df[feature_cols].values.astype(np.float32)
|
| 42 |
+
y = df[target_col].values
|
| 43 |
+
target_n = int(1382)
|
| 44 |
+
|
| 45 |
+
for i in range(X.shape[1]):
|
| 46 |
+
col_vals = X[:, i]
|
| 47 |
+
mask = np.isnan(col_vals)
|
| 48 |
+
if mask.any():
|
| 49 |
+
mean_val = np.nanmean(col_vals)
|
| 50 |
+
X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
|
| 51 |
+
|
| 52 |
+
# TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
|
| 53 |
+
# (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
|
| 54 |
+
gen = TabPFGen(
|
| 55 |
+
n_sgld_steps=1000,
|
| 56 |
+
sgld_step_size=0.01,
|
| 57 |
+
sgld_noise_scale=0.01,
|
| 58 |
+
device="auto",
|
| 59 |
+
)
|
| 60 |
+
|
| 61 |
+
print(f"[TabPFGen] Generating {target_n} rows via generate_classification")
|
| 62 |
+
X_syn, y_syn = gen.generate_classification(X, y, n_samples=target_n)
|
| 63 |
+
|
| 64 |
+
syn_df = pd.DataFrame(X_syn, columns=feature_cols)
|
| 65 |
+
syn_df[target_col] = y_syn
|
| 66 |
+
|
| 67 |
+
for col, cats in cat_encodings.items():
|
| 68 |
+
codes = np.round(syn_df[col].values).astype(int)
|
| 69 |
+
codes = np.clip(codes, 0, len(cats) - 1)
|
| 70 |
+
syn_df[col] = [cats[c] for c in codes]
|
| 71 |
+
|
| 72 |
+
if target_cats is not None:
|
| 73 |
+
codes = np.round(syn_df[target_col].values).astype(int)
|
| 74 |
+
codes = np.clip(codes, 0, len(target_cats) - 1)
|
| 75 |
+
syn_df[target_col] = [target_cats[c] for c in codes]
|
| 76 |
+
|
| 77 |
+
if len(syn_df) > target_n:
|
| 78 |
+
print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
|
| 79 |
+
syn_df = syn_df.iloc[:target_n].copy()
|
| 80 |
+
elif len(syn_df) < target_n:
|
| 81 |
+
deficit = target_n - len(syn_df)
|
| 82 |
+
print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
|
| 83 |
+
if len(syn_df) > 0:
|
| 84 |
+
extra = syn_df.sample(n=deficit, replace=True, random_state=42)
|
| 85 |
+
syn_df = pd.concat(
|
| 86 |
+
[syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
|
| 87 |
+
ignore_index=True,
|
| 88 |
+
)
|
| 89 |
+
else:
|
| 90 |
+
syn_df = df[feature_cols + [target_col]].sample(
|
| 91 |
+
n=target_n, replace=True, random_state=42
|
| 92 |
+
).reset_index(drop=True)
|
| 93 |
+
|
| 94 |
+
syn_df = syn_df[list(df.columns)]
|
| 95 |
+
if len(syn_df) != target_n:
|
| 96 |
+
raise RuntimeError(
|
| 97 |
+
f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
|
| 98 |
+
)
|
| 99 |
+
syn_df.to_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen-c2-1382-20260501_054310.csv", index=False)
|
| 100 |
+
print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen-c2-1382-20260501_054310.csv")
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/gen_20260501_054310.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:df9c8e7725f68e68c48bbd793583da34cdc8df62d4753f48f5d794b3c2fe2a6e
|
| 3 |
+
size 1299
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/input_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e348e38f04c3c1041d993b37fc998db9f8328874eca78bab60f77644edd5cb1a
|
| 3 |
+
size 1344
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/normalized_schema_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a63ea2091eccf0145444f670415e7201dbdd052bc2ddabdc4241f6f16bdcf0a0
|
| 3 |
+
size 3153
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/public_gate_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:bdc8c14ffce6055ca726f7949b2900c4ba619b670f8fc63c61328c24e4c46c66
|
| 3 |
+
size 912
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/public_gate/staged_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4f818478b10296a56030457484f5ddc47ba351b370e0674a994465a66fdabc08
|
| 3 |
+
size 3969
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/runtime_result.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1f07115b045396870ecbfef17da98042b5447955d6b78d2aff5217e5deb2b278
|
| 3 |
+
size 887
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/staged_features.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:37511511f1d7cb0e004f9d7305c900644ebefe672c9a1a418c1f29b36786fabd
|
| 3 |
+
size 659
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/test.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:b48114a7d0bc5bd9a07920f903c8d4aba8bf98bf2a66a050da03588b0245ca73
|
| 3 |
+
size 5273
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4aed00c2c2b3f88a55a7ebff31b2e1b5e0e32fb0a7267e0b9d2779cd23e434dd
|
| 3 |
+
size 41565
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/public/val.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:26e90c1170a57a14c05832ac88027722b1f3848f9662c7c09ef7c93dcba4cc01
|
| 3 |
+
size 5176
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/adapter_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0bef0e7b67187e8dc57ca54652e8e192dc7db05dd6b8e972652856606832d55f
|
| 3 |
+
size 324
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/adapter_transforms_applied.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
|
| 3 |
+
size 2
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/staged/tabpfgen/model_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:984558f0cad38f2931ed81c8907d564187f4bf4bac59fdd0faa53721d024cf0d
|
| 3 |
+
size 4169
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen-c2-1382-20260501_054310.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c1b5c3eb2de3884b6fa7c5f7dfec978ca2c4fb9011eb27b75455fdb21cd7e0c4
|
| 3 |
+
size 41880
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/tabpfgen_meta.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:726f0361d59073ce9882465385428c84ef34067f3c08831531a3daf1dab5f023
|
| 3 |
+
size 444
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260501_054310/train_20260501_054310.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:90cbba9f28b2fe9d533d38ca45ee2eb45779177b84e934be49d88ee80150e9e1
|
| 3 |
+
size 595
|