Add files using upload-large-folder tool
Browse files- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/_tabpfgen_generate.py +122 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/gen_20260505_025826.log +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/input_snapshot.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/run_config.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/runtime_result.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/staged_features.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/test.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/train.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/val.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/adapter_report.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/model_input_manifest.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen-c2-1382-20260505_025826.csv +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen_meta.json +3 -0
- syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/train_20260505_025826.log +3 -0
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/_tabpfgen_generate.py
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import os
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import numpy as np
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import pandas as pd
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import json
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from tabpfgen import TabPFGen
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df = pd.read_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/train.csv")
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target_col = "class"
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target_missing = df[target_col].isna()
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if target_missing.any():
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dropped = int(target_missing.sum())
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df = df.loc[~target_missing].copy()
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print(
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f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
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)
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if df.empty:
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raise ValueError(
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f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
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)
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feature_cols = [c for c in df.columns if c != target_col]
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cat_encodings = {}
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for col in feature_cols:
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if df[col].dtype == object or str(df[col].dtype) == 'category':
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cats = sorted(df[col].dropna().unique().tolist(), key=str)
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cat_map = {v: i for i, v in enumerate(cats)}
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df[col] = df[col].map(cat_map).astype(float)
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cat_encodings[col] = cats
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print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
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target_cats = None
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if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
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cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
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t_map = {v: i for i, v in enumerate(cats)}
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df[target_col] = df[target_col].map(t_map).astype(float)
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target_cats = cats
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print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
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X = df[feature_cols].values.astype(np.float32)
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y = df[target_col].values
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fit_rows_cap = max(1, int(os.environ.get("TABPFGEN_FIT_MAX_ROWS", "50000")))
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if len(X) > fit_rows_cap:
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rng = np.random.default_rng(42)
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idx = np.sort(rng.choice(len(X), size=fit_rows_cap, replace=False))
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X = X[idx]
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y = y[idx]
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print(f"[TabPFGen] Downsampled fit rows -> {len(X)} (cap={fit_rows_cap})")
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target_n = int(1382)
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for i in range(X.shape[1]):
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col_vals = X[:, i]
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mask = np.isnan(col_vals)
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if mask.any():
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mean_val = np.nanmean(col_vals)
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X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
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chunk_rows = max(1, int(os.environ.get("TABPFGEN_GEN_CHUNK_ROWS", "256")))
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device = (os.environ.get("TABPFGEN_DEVICE") or "auto").strip() or "auto"
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# TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
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# (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
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gen = TabPFGen(
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n_sgld_steps=1000,
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sgld_step_size=0.01,
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sgld_noise_scale=0.01,
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device=device,
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)
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print(f"[TabPFGen] Generating {target_n} rows via generate_classification (chunk_rows={chunk_rows}, device={device})")
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x_parts = []
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y_parts = []
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remaining = target_n
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while remaining > 0:
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take = min(chunk_rows, remaining)
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X_part, y_part = gen.generate_classification(X, y, n_samples=take)
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x_parts.append(np.asarray(X_part))
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y_parts.append(np.asarray(y_part))
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remaining -= take
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print(f"[TabPFGen] chunk done: take={take}, remaining={remaining}")
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| 83 |
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X_syn = np.concatenate(x_parts, axis=0)
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y_syn = np.concatenate(y_parts, axis=0)
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syn_df = pd.DataFrame(X_syn, columns=feature_cols)
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syn_df[target_col] = y_syn
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for col, cats in cat_encodings.items():
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codes = np.round(syn_df[col].values).astype(int)
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codes = np.clip(codes, 0, len(cats) - 1)
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syn_df[col] = [cats[c] for c in codes]
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| 94 |
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if target_cats is not None:
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codes = np.round(syn_df[target_col].values).astype(int)
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codes = np.clip(codes, 0, len(target_cats) - 1)
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syn_df[target_col] = [target_cats[c] for c in codes]
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if len(syn_df) > target_n:
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print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
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syn_df = syn_df.iloc[:target_n].copy()
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elif len(syn_df) < target_n:
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deficit = target_n - len(syn_df)
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print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
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if len(syn_df) > 0:
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extra = syn_df.sample(n=deficit, replace=True, random_state=42)
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syn_df = pd.concat(
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[syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
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ignore_index=True,
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)
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else:
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syn_df = df[feature_cols + [target_col]].sample(
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| 113 |
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n=target_n, replace=True, random_state=42
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| 114 |
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).reset_index(drop=True)
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| 116 |
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syn_df = syn_df[list(df.columns)]
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| 117 |
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if len(syn_df) != target_n:
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| 118 |
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raise RuntimeError(
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| 119 |
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f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
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| 120 |
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)
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| 121 |
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syn_df.to_csv("/work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen-c2-1382-20260505_025826.csv", index=False)
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| 122 |
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print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen-c2-1382-20260505_025826.csv")
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/gen_20260505_025826.log
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version https://git-lfs.github.com/spec/v1
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oid sha256:bd37470a04e5b77192013393ca5743e0dfaacf234072d5c2bdc4e8d5d8e400ec
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size 3226
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/input_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:e348e38f04c3c1041d993b37fc998db9f8328874eca78bab60f77644edd5cb1a
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size 1344
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/normalized_schema_snapshot.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:a63ea2091eccf0145444f670415e7201dbdd052bc2ddabdc4241f6f16bdcf0a0
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/public_gate_report.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:bdc8c14ffce6055ca726f7949b2900c4ba619b670f8fc63c61328c24e4c46c66
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size 912
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/public_gate/staged_input_manifest.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:d5c682d794819c491053f9b673188e61444092bdb15712d2c7e753938a767ccb
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size 3969
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/run_config.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:b7fb730af63198afb935e198e426bc22c087c51333082ece0f505e6a61232eb6
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size 2087
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/runtime_result.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:ffaa4d78a653bd78190ea39b5fdc25245f9177e5c9bc9cf7bc27e3ca87293e83
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size 887
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/staged_features.json
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version https://git-lfs.github.com/spec/v1
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oid sha256:37511511f1d7cb0e004f9d7305c900644ebefe672c9a1a418c1f29b36786fabd
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size 659
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/test.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:b48114a7d0bc5bd9a07920f903c8d4aba8bf98bf2a66a050da03588b0245ca73
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size 5273
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/train.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:4aed00c2c2b3f88a55a7ebff31b2e1b5e0e32fb0a7267e0b9d2779cd23e434dd
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size 41565
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/public/val.csv
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oid sha256:26e90c1170a57a14c05832ac88027722b1f3848f9662c7c09ef7c93dcba4cc01
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size 5176
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/adapter_report.json
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oid sha256:07a415ebd159c95619e66abb7847eea48ec54fb35b4d273935764a4318e9e46c
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size 324
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/adapter_transforms_applied.json
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oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
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size 2
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/staged/tabpfgen/model_input_manifest.json
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oid sha256:a0e6177adb8ed1a42f1497d9d59bc34b24281d7f05abb6055bf077b49d23b86e
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size 4169
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen-c2-1382-20260505_025826.csv
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oid sha256:3b49af73dcfe0980b658726ad1d61f45776ec5edec34acf5c5a4babe5f81ab04
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size 41922
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syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/tabpfgen_meta.json
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version https://git-lfs.github.com/spec/v1
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size 444
|
syntheticSuccess/c2/tabpfgen/tabpfgen-c2-20260505_025826/train_20260505_025826.log
ADDED
|
@@ -0,0 +1,3 @@
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|
|
|
|
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|
|
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| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:a028185dfc74f2ea36397ef2db6c996b532a53ac12d317c0881382d013164fd3
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| 3 |
+
size 595
|