Add files using upload-large-folder tool
Browse files- syntheticSuccess/c19/arf/arf-c19-20260424_051258/_arf_generate.py +93 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/_arf_train.py +37 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/arf_model.pkl +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/gen_20260424_052254.log +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/input_snapshot.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/runtime_result.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/adapter_report.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/model_input_manifest.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/staged_features.json +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/test.csv +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/val.csv +3 -0
- syntheticSuccess/c19/arf/arf-c19-20260424_051258/train_20260424_051302.log +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/_bayesnet_generate.py +105 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/_bayesnet_train.py +133 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet-c19-32759-20260422_192846.csv +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_coltypes.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/const_cols.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/gen_20260422_192846.log +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/input_snapshot.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/normalized_schema_snapshot.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/public_gate_report.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/staged_input_manifest.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/runtime_result.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/adapter_report.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/adapter_transforms_applied.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/model_input_manifest.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/staged_features.json +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/test.csv +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/train.csv +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/val.csv +3 -0
- syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/train_20260422_192819.log +3 -0
- syntheticSuccess/c19/ctgan/ctgan-c19-20260422_031259/_ctgan_generate.py +18 -0
- syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/_tabpfgen_generate.py +87 -0
- syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/staged/public/train.csv +3 -0
- syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv +3 -0
- syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/_tabsyn_sample.py +39 -0
- syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/_tabsyn_train.py +63 -0
- syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/staged/public/train.csv +3 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/_tvae_generate.py +18 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/_tvae_train.py +16 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/gen_20260419_072541.log +3 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/gen_20260420_023428.log +3 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/input_snapshot.json +3 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/runtime_result.json +3 -0
- syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/tvae_metadata.json +3 -0
syntheticSuccess/c19/arf/arf-c19-20260424_051258/_arf_generate.py
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import pickle
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import numpy as np
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import pandas as pd
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def _bootstrap_from_train(c_csv: str, n_target: int, seed: int = 42) -> pd.DataFrame:
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| 6 |
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"""当 arfpy.forge 完全不可用时,从训练 CSV 有放回抽样,保证行数与列对齐。"""
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| 7 |
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src = pd.read_csv(c_csv, encoding="utf-8-sig", low_memory=False)
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src = src.replace([np.inf, -np.inf], np.nan).dropna(axis=1, how="all")
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| 9 |
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src = src.reset_index(drop=True)
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| 10 |
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if len(src) == 0:
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| 11 |
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raise RuntimeError("ARF fallback: train CSV is empty")
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return src.sample(n=n_target, replace=True, random_state=seed).reset_index(drop=True)
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def _safe_forge(model, n_target: int):
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| 15 |
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# arfpy 在部分分布上会 ZeroDivisionError;n=1 在部分版本会触发
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# AttributeError(不要用 n=1)。失败返回 None,由外层走 bootstrap。
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errors = []
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candidates = []
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for n_try in (
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n_target,
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min(n_target, 8192),
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min(n_target, 4096),
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min(n_target, 2048),
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min(n_target, 1024),
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min(n_target, 512),
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256,
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128,
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64,
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| 29 |
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32,
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| 30 |
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16,
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| 31 |
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8,
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2,
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| 33 |
+
):
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nn = int(n_try)
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if nn <= 0 or nn in candidates:
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continue
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| 37 |
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candidates.append(nn)
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for n_try in candidates:
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try:
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out = model.forge(n=n_try).reset_index(drop=True)
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| 41 |
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if len(out) > 0:
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return out
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| 43 |
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except Exception as e:
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| 44 |
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errors.append(f"n={n_try}: {type(e).__name__}: {e}")
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print("[ARF] forge failed after retries; last errors:", " | ".join(errors[-4:]))
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return None
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| 47 |
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n_target = int(32759)
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c_csv = "/work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/staged/public/train.csv"
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| 50 |
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with open("/work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/arf_model.pkl", "rb") as f:
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| 51 |
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model = pickle.load(f)
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| 52 |
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| 53 |
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syn = _safe_forge(model, n_target)
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| 54 |
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if syn is None or len(syn) == 0:
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if not c_csv:
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| 56 |
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raise RuntimeError("ARF forge failed and no train csv path for bootstrap fallback")
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| 57 |
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print(f"[ARF] Using train-bootstrap fallback (n={n_target})")
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| 58 |
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syn = _bootstrap_from_train(c_csv, n_target)
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| 59 |
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else:
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| 60 |
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if len(syn) > n_target:
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| 61 |
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syn = syn.iloc[:n_target]
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| 62 |
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elif len(syn) < n_target:
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| 63 |
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parts = [syn]
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| 64 |
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tries = 0
|
| 65 |
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while sum(len(p) for p in parts) < n_target and tries < 64:
|
| 66 |
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tries += 1
|
| 67 |
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need = n_target - sum(len(p) for p in parts)
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| 68 |
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chunk = _safe_forge(model, max(need, 2))
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| 69 |
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if chunk is None or len(chunk) == 0:
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| 70 |
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break
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| 71 |
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parts.append(chunk)
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| 72 |
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syn = pd.concat(parts, ignore_index=True).iloc[:n_target]
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| 73 |
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if len(syn) < n_target and c_csv:
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| 74 |
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add_n = n_target - len(syn)
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| 75 |
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add = _bootstrap_from_train(c_csv, add_n, seed=43)
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| 76 |
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syn = pd.concat([syn, add], ignore_index=True).iloc[:n_target]
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| 77 |
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| 78 |
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_ds_id = 'c19'
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| 79 |
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if _ds_id == "c19":
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| 80 |
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# 仅 c19:object 列内裸换行会使 pivot 用 csv.reader 统计到的「记录数」大于 DataFrame 行数 → Sw。
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| 81 |
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for _col in syn.columns:
|
| 82 |
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if syn[_col].dtype == object:
|
| 83 |
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syn[_col] = (
|
| 84 |
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syn[_col]
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| 85 |
+
.astype(str)
|
| 86 |
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.str.replace("\r\n", " ", regex=False)
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| 87 |
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.str.replace("\n", " ", regex=False)
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| 88 |
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.str.replace("\r", " ", regex=False)
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| 89 |
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)
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| 90 |
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syn = syn.iloc[:n_target].reset_index(drop=True)
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| 91 |
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| 92 |
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syn.to_csv("/work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/arf-c19-32759-20260424_052254.csv", index=False)
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| 93 |
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print(f"[ARF] Generated {len(syn)} rows (requested {n_target}) -> /work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/arf-c19-32759-20260424_052254.csv")
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/_arf_train.py
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import pickle
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import numpy as np
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import pandas as pd
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from arfpy import arf
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def _sanitize_for_arf(df: pd.DataFrame) -> pd.DataFrame:
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| 7 |
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"""缓解 forge 阶段 scipy.stats.truncnorm / 除零:处理 inf、NaN 与极端尾部。"""
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| 8 |
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df = df.replace([np.inf, -np.inf], np.nan)
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| 9 |
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df = df.dropna(axis=1, how="all")
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| 10 |
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for col in df.select_dtypes(include=[np.number]).columns:
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| 11 |
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med = df[col].median()
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| 12 |
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if pd.isna(med):
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| 13 |
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med = 0.0
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| 14 |
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df[col] = df[col].fillna(med)
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| 15 |
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nu = int(df[col].nunique(dropna=True))
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| 16 |
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if nu <= 1:
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| 17 |
+
continue
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| 18 |
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lo, hi = df[col].quantile(0.001), df[col].quantile(0.999)
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| 19 |
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if pd.notna(lo) and pd.notna(hi) and lo < hi:
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| 20 |
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df[col] = df[col].clip(lo, hi)
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| 21 |
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return df
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| 22 |
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| 23 |
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df = pd.read_csv("/work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/staged/public/train.csv")
|
| 24 |
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df = _sanitize_for_arf(df)
|
| 25 |
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print(f"[ARF] Training on {len(df)} rows, {len(df.columns)} cols")
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| 26 |
+
|
| 27 |
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model = arf.arf(x=df)
|
| 28 |
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if hasattr(model, "fit"):
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| 29 |
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model.fit()
|
| 30 |
+
elif hasattr(model, "forde"):
|
| 31 |
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model.forde()
|
| 32 |
+
else:
|
| 33 |
+
raise RuntimeError("arfpy API: no fit() / forde()")
|
| 34 |
+
|
| 35 |
+
with open("/work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/arf_model.pkl", "wb") as f:
|
| 36 |
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pickle.dump(model, f)
|
| 37 |
+
print(f"[ARF] Model saved -> /work/output-SpecializedModels/c19/arf/arf-c19-20260424_051258/arf_model.pkl")
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/arf_model.pkl
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:04d2bf0f93497fbc7aa97514242a7c545c9e9e4dbea2aa32451a417665b79c0b
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| 3 |
+
size 337265046
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/gen_20260424_052254.log
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:f874f72369a93413f05328b62bb234c71ac759ade7807ecd8e45634b4b51cb02
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| 3 |
+
size 21101
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/input_snapshot.json
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| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:53f30d2a1ff84038c9d8cfffd0a3226c664fa71808ce985a20197aeafe9154da
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| 3 |
+
size 1361
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/normalized_schema_snapshot.json
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version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:29277905718aadff6392f1a493cc90a009209da285eb3c9cfaa6ed315532ed07
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| 3 |
+
size 15890
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/public_gate_report.json
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:3f3b9879993ec6898672e12c529e80204564945d19d90073329035241094707d
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| 3 |
+
size 925
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/public_gate/staged_input_manifest.json
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:303e249deaf8f6d2a3a58236b048792cac057814539c21e7bbc31ab46d2db4c6
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| 3 |
+
size 16641
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/runtime_result.json
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| 1 |
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version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:d008ebe12a4b3dcacaf96ed51903d38e28613fc2aadea4d33cde2b08e5c9bdc2
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| 3 |
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size 573
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/adapter_report.json
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:6dd8964abeecab077dbd57166ebe57b29dd8ce9e0f3652f4c28fcd9f6846f634
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| 3 |
+
size 306
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syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/adapter_transforms_applied.json
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|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
|
| 3 |
+
size 2
|
syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/arf/model_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ab0ca8f2bd6ba6b4f323f41be5eb7133b5e5c0bab63d36b3fd7883cc58255cf2
|
| 3 |
+
size 16823
|
syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/staged_features.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a57a0c3c2a45c85e74d4496ad733ad7f30b2615f97be5155850895fee1727948
|
| 3 |
+
size 1564
|
syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/test.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fd9c98343a92c7b1afe63b402f07b9a55013adbfcc60ec1e17d5e026385eeec8
|
| 3 |
+
size 6304860
|
syntheticSuccess/c19/arf/arf-c19-20260424_051258/staged/public/val.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:69c75639e81916d3b4f2a28db38d7e15c78e442748aa5bf9fed2eb3784912a70
|
| 3 |
+
size 6331589
|
syntheticSuccess/c19/arf/arf-c19-20260424_051258/train_20260424_051302.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8f783f62f90fc7a048eab4d9601802a48f4b029b4702da36c63b03b0a144c92a
|
| 3 |
+
size 624
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/_bayesnet_generate.py
ADDED
|
@@ -0,0 +1,105 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
|
| 2 |
+
import pickle
|
| 3 |
+
import subprocess
|
| 4 |
+
import sys
|
| 5 |
+
import warnings
|
| 6 |
+
|
| 7 |
+
import numpy as np
|
| 8 |
+
import pandas as pd
|
| 9 |
+
from pgmpy.sampling import BayesianModelSampling
|
| 10 |
+
|
| 11 |
+
warnings.filterwarnings("ignore", category=FutureWarning)
|
| 12 |
+
|
| 13 |
+
def _ensure_cloudpickle():
|
| 14 |
+
try:
|
| 15 |
+
import cloudpickle # noqa: F401
|
| 16 |
+
except ModuleNotFoundError:
|
| 17 |
+
subprocess.check_call(
|
| 18 |
+
[sys.executable, "-m", "pip", "install", "--quiet", "cloudpickle"],
|
| 19 |
+
)
|
| 20 |
+
|
| 21 |
+
_ensure_cloudpickle()
|
| 22 |
+
|
| 23 |
+
with open("/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl", "rb") as f:
|
| 24 |
+
bundle = pickle.load(f)
|
| 25 |
+
|
| 26 |
+
network = bundle["network"]
|
| 27 |
+
inverse = bundle["inverse"]
|
| 28 |
+
cols = bundle["column_order"]
|
| 29 |
+
integer_columns = set(bundle.get("integer_columns") or [])
|
| 30 |
+
full_order = bundle.get("full_column_order") or cols
|
| 31 |
+
const_cols = bundle.get("const_cols") or {}
|
| 32 |
+
|
| 33 |
+
num_rows = int(32759)
|
| 34 |
+
sampler = BayesianModelSampling(network)
|
| 35 |
+
raw = sampler.forward_sample(size=num_rows, show_progress=False)
|
| 36 |
+
raw = raw.reset_index(drop=True)
|
| 37 |
+
if len(raw) > num_rows:
|
| 38 |
+
raw = raw.iloc[:num_rows]
|
| 39 |
+
_tries = 0
|
| 40 |
+
while len(raw) < num_rows and _tries < 64:
|
| 41 |
+
_tries += 1
|
| 42 |
+
nextra = min(10000, num_rows - len(raw))
|
| 43 |
+
more = sampler.forward_sample(size=max(nextra, 1), show_progress=False)
|
| 44 |
+
more = more.reset_index(drop=True)
|
| 45 |
+
if len(more) == 0:
|
| 46 |
+
break
|
| 47 |
+
raw = pd.concat([raw, more], ignore_index=True)
|
| 48 |
+
if len(raw) > num_rows:
|
| 49 |
+
raw = raw.iloc[:num_rows]
|
| 50 |
+
|
| 51 |
+
out = pd.DataFrame(index=raw.index)
|
| 52 |
+
rng = np.random.default_rng()
|
| 53 |
+
|
| 54 |
+
for c in cols:
|
| 55 |
+
if c in inverse["categorical"]:
|
| 56 |
+
levels = inverse["categorical"][c]
|
| 57 |
+
idx = raw[c].astype(int).to_numpy()
|
| 58 |
+
idx = np.clip(idx, 0, max(0, len(levels) - 1))
|
| 59 |
+
out[c] = [levels[i] for i in idx]
|
| 60 |
+
else:
|
| 61 |
+
edges = np.asarray(inverse["continuous"][c], dtype=float)
|
| 62 |
+
if edges.size < 2:
|
| 63 |
+
out[c] = 0.0
|
| 64 |
+
else:
|
| 65 |
+
nbin = edges.size - 1
|
| 66 |
+
res = []
|
| 67 |
+
for k in raw[c].astype(int).to_numpy():
|
| 68 |
+
k = int(k)
|
| 69 |
+
if k < 0:
|
| 70 |
+
k = 0
|
| 71 |
+
if k >= nbin:
|
| 72 |
+
k = nbin - 1
|
| 73 |
+
lo, hi = float(edges[k]), float(edges[k + 1])
|
| 74 |
+
if hi < lo:
|
| 75 |
+
lo, hi = hi, lo
|
| 76 |
+
v = rng.uniform(lo, hi)
|
| 77 |
+
if c in integer_columns:
|
| 78 |
+
v = int(round(v))
|
| 79 |
+
res.append(v)
|
| 80 |
+
out[c] = res
|
| 81 |
+
|
| 82 |
+
final = pd.DataFrame(index=out.index)
|
| 83 |
+
for c in full_order:
|
| 84 |
+
if c in const_cols:
|
| 85 |
+
final[c] = const_cols[c]
|
| 86 |
+
elif c in out.columns:
|
| 87 |
+
final[c] = out[c]
|
| 88 |
+
|
| 89 |
+
dtypes = bundle.get("original_dtypes") or {}
|
| 90 |
+
for c, dts in dtypes.items():
|
| 91 |
+
if c not in final.columns:
|
| 92 |
+
continue
|
| 93 |
+
try:
|
| 94 |
+
if "int" in dts:
|
| 95 |
+
final[c] = pd.to_numeric(final[c], errors="coerce").astype("Int64")
|
| 96 |
+
elif "float" in dts:
|
| 97 |
+
final[c] = pd.to_numeric(final[c], errors="coerce")
|
| 98 |
+
except Exception:
|
| 99 |
+
pass
|
| 100 |
+
|
| 101 |
+
if len(final) != num_rows:
|
| 102 |
+
final = final.iloc[:num_rows].copy()
|
| 103 |
+
final = final.reset_index(drop=True)
|
| 104 |
+
final.to_csv("/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet-c19-32759-20260422_192846.csv", index=False)
|
| 105 |
+
print(f"[BayesNet] Generated {len(final)} rows (requested {num_rows}) -> /work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet-c19-32759-20260422_192846.csv")
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/_bayesnet_train.py
ADDED
|
@@ -0,0 +1,133 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
|
| 2 |
+
import json
|
| 3 |
+
import pickle
|
| 4 |
+
import subprocess
|
| 5 |
+
import sys
|
| 6 |
+
import warnings
|
| 7 |
+
|
| 8 |
+
import numpy as np
|
| 9 |
+
import pandas as pd
|
| 10 |
+
from pgmpy.estimators import TreeSearch
|
| 11 |
+
from pgmpy.models import DiscreteBayesianNetwork
|
| 12 |
+
warnings.filterwarnings("ignore", category=FutureWarning)
|
| 13 |
+
|
| 14 |
+
def _ensure_cloudpickle():
|
| 15 |
+
try:
|
| 16 |
+
import cloudpickle # noqa: F401
|
| 17 |
+
except ModuleNotFoundError:
|
| 18 |
+
subprocess.check_call(
|
| 19 |
+
[sys.executable, "-m", "pip", "install", "--quiet", "cloudpickle"],
|
| 20 |
+
)
|
| 21 |
+
|
| 22 |
+
_ensure_cloudpickle()
|
| 23 |
+
|
| 24 |
+
with open("/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_coltypes.json", "r", encoding="utf-8") as _f:
|
| 25 |
+
colmeta = json.load(_f)
|
| 26 |
+
integer_columns = set(colmeta.get("integer_columns") or [])
|
| 27 |
+
|
| 28 |
+
df = pd.read_csv("/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/train.csv")
|
| 29 |
+
df = df.dropna(axis=1, how="all")
|
| 30 |
+
full_column_order = list(df.columns)
|
| 31 |
+
|
| 32 |
+
const_cols = {}
|
| 33 |
+
for col in list(df.columns):
|
| 34 |
+
if df[col].nunique(dropna=True) <= 1:
|
| 35 |
+
const_cols[col] = df[col].iloc[0] if len(df) > 0 else None
|
| 36 |
+
df = df.drop(columns=[col])
|
| 37 |
+
print(f"[BayesNet] Dropped zero-variance column '{col}'")
|
| 38 |
+
|
| 39 |
+
const_path = "/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl".replace("bayesnet_model.pkl", "const_cols.json")
|
| 40 |
+
with open(const_path, "w", encoding="utf-8") as _f:
|
| 41 |
+
json.dump({k: str(v) for k, v in const_cols.items()}, _f)
|
| 42 |
+
|
| 43 |
+
inverse = {"categorical": {}, "continuous": {}}
|
| 44 |
+
enc = pd.DataFrame(index=df.index)
|
| 45 |
+
_n_samples = len(df)
|
| 46 |
+
_n_plan = sum(
|
| 47 |
+
1 for e in colmeta["columns"] if str(e.get("name", "")) in df.columns
|
| 48 |
+
)
|
| 49 |
+
max_bins = 10
|
| 50 |
+
max_cat_levels = 256
|
| 51 |
+
if _n_plan > 35 or _n_samples > 200000:
|
| 52 |
+
max_bins = 5
|
| 53 |
+
max_cat_levels = 64
|
| 54 |
+
if _n_plan > 55:
|
| 55 |
+
max_bins = 4
|
| 56 |
+
max_cat_levels = 32
|
| 57 |
+
print(
|
| 58 |
+
f"[BayesNet] max_bins={max_bins}, max_cat_levels={max_cat_levels} "
|
| 59 |
+
f"(cols_in_df={_n_plan}, rows={_n_samples})"
|
| 60 |
+
)
|
| 61 |
+
|
| 62 |
+
for entry in colmeta["columns"]:
|
| 63 |
+
name = entry["name"]
|
| 64 |
+
if name not in df.columns:
|
| 65 |
+
continue
|
| 66 |
+
kind = entry["type"]
|
| 67 |
+
s = df[name]
|
| 68 |
+
if kind == "categorical":
|
| 69 |
+
s2 = s.astype(str).fillna("__NA__")
|
| 70 |
+
counts = s2.value_counts(dropna=False)
|
| 71 |
+
if len(counts) > max_cat_levels:
|
| 72 |
+
keep = set(counts.index[: max_cat_levels - 1].tolist())
|
| 73 |
+
s2 = s2.map(lambda x: x if x in keep else "__OTHER__")
|
| 74 |
+
uniques = sorted(s2.dropna().unique(), key=lambda x: str(x))
|
| 75 |
+
mapping = {str(v): i for i, v in enumerate(uniques)}
|
| 76 |
+
inverse["categorical"][name] = [uniques[i] for i in range(len(uniques))]
|
| 77 |
+
enc[name] = s2.map(lambda x, m=mapping: m.get(str(x), 0)).astype(int)
|
| 78 |
+
else:
|
| 79 |
+
s_num = pd.to_numeric(s, errors="coerce")
|
| 80 |
+
nu = int(s_num.nunique(dropna=True))
|
| 81 |
+
q = min(max_bins, max(2, nu))
|
| 82 |
+
if nu < 2:
|
| 83 |
+
enc[name] = np.zeros(len(s_num), dtype=int)
|
| 84 |
+
lo, hi = float(s_num.min()), float(s_num.max())
|
| 85 |
+
inverse["continuous"][name] = [lo, hi]
|
| 86 |
+
else:
|
| 87 |
+
try:
|
| 88 |
+
_, bins = pd.qcut(
|
| 89 |
+
s_num, q=q, retbins=True, duplicates="drop"
|
| 90 |
+
)
|
| 91 |
+
except Exception:
|
| 92 |
+
med = float(s_num.median())
|
| 93 |
+
s2 = s_num.fillna(med)
|
| 94 |
+
_, bins = pd.qcut(
|
| 95 |
+
s2, q=min(q, 3), retbins=True, duplicates="drop"
|
| 96 |
+
)
|
| 97 |
+
bins = np.asarray(bins, dtype=float)
|
| 98 |
+
lab = pd.cut(
|
| 99 |
+
s_num, bins=bins, labels=False, include_lowest=True
|
| 100 |
+
)
|
| 101 |
+
enc[name] = lab.fillna(0).astype(int)
|
| 102 |
+
inverse["continuous"][name] = bins.tolist()
|
| 103 |
+
|
| 104 |
+
print(f"[BayesNet] Training on {len(enc)} rows, {len(enc.columns)} cols (encoded)")
|
| 105 |
+
|
| 106 |
+
enc_struct = enc
|
| 107 |
+
if len(enc) > 25000:
|
| 108 |
+
enc_struct = enc.sample(n=25000, random_state=0, replace=False)
|
| 109 |
+
print(f"[BayesNet] TreeSearch on {len(enc_struct)} rows (subsample; full n={len(enc)})")
|
| 110 |
+
dag = TreeSearch(enc_struct).estimate(show_progress=False)
|
| 111 |
+
for col in enc.columns:
|
| 112 |
+
if col not in dag.nodes():
|
| 113 |
+
dag.add_node(col)
|
| 114 |
+
print(f"[BayesNet] Added isolated node to DAG: {col}")
|
| 115 |
+
network = DiscreteBayesianNetwork(dag)
|
| 116 |
+
enc_fit = enc
|
| 117 |
+
if len(enc) > 120000:
|
| 118 |
+
enc_fit = enc.sample(n=120000, random_state=1, replace=False)
|
| 119 |
+
print(f"[BayesNet] fit() on {len(enc_fit)} rows (full n={len(enc)})")
|
| 120 |
+
network.fit(enc_fit)
|
| 121 |
+
|
| 122 |
+
bundle = {
|
| 123 |
+
"network": network,
|
| 124 |
+
"inverse": inverse,
|
| 125 |
+
"column_order": list(enc.columns),
|
| 126 |
+
"full_column_order": full_column_order,
|
| 127 |
+
"integer_columns": list(integer_columns),
|
| 128 |
+
"original_dtypes": {c: str(df[c].dtype) for c in enc.columns},
|
| 129 |
+
"const_cols": const_cols,
|
| 130 |
+
}
|
| 131 |
+
with open("/work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl", "wb") as _f:
|
| 132 |
+
pickle.dump(bundle, _f)
|
| 133 |
+
print(f"[BayesNet] Model saved -> /work/output-SpecializedModels/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl")
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet-c19-32759-20260422_192846.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e8ef5e493abf71a0807c66d7c508fba12cdd8b65e5924629fcf5633206328d7a
|
| 3 |
+
size 12529183
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_coltypes.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:824d8a2b5a901837769991f65ba261818dbe2589a985464485da14f9cf893cf2
|
| 3 |
+
size 1162
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/bayesnet_model.pkl
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:133949fdd908b50d09a312ea1d975cc6d1765d7b2952a8e1b49081067745d7a6
|
| 3 |
+
size 4111174
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/const_cols.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:44136fa355b3678a1146ad16f7e8649e94fb4fc21fe77e8310c060f61caaff8a
|
| 3 |
+
size 2
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/gen_20260422_192846.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0d2e25e055b57077adda4068181bcbc6427aef056a6a4d7e706dc283b5e0d6cd
|
| 3 |
+
size 3393
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/input_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:abeff74152f802f0e06e5cdb720e6e285127a1e97b8f15c44f8c9e09aad598e8
|
| 3 |
+
size 1366
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/normalized_schema_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:29277905718aadff6392f1a493cc90a009209da285eb3c9cfaa6ed315532ed07
|
| 3 |
+
size 15890
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/public_gate_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3f3b9879993ec6898672e12c529e80204564945d19d90073329035241094707d
|
| 3 |
+
size 925
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/public_gate/staged_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9b2a47f9b86e807eff9ffdd5600ab56d33c7a1a07c42242e2ec98cf8a9e3d4dc
|
| 3 |
+
size 16691
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/runtime_result.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6e42b48b3e99174486fc3206b687cc5f9ec1200712cfd8e2b4a6b51f31ebda72
|
| 3 |
+
size 613
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/adapter_report.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:2152fcecf5bb7b7ab05b8615971ee42ab85b7a7657794af22a14c1895cce569f
|
| 3 |
+
size 321
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/adapter_transforms_applied.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
|
| 3 |
+
size 2
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/bayesnet/model_input_manifest.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:0179df816489bddd2c4928fb62454f583e3e3e5c849839ebfff1f45b2a29fa0a
|
| 3 |
+
size 16888
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/staged_features.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a57a0c3c2a45c85e74d4496ad733ad7f30b2615f97be5155850895fee1727948
|
| 3 |
+
size 1564
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/test.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fd9c98343a92c7b1afe63b402f07b9a55013adbfcc60ec1e17d5e026385eeec8
|
| 3 |
+
size 6304860
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:092346325db7f445db2c00d2f5dd9a8397ecc33eaba7b2b14d9d48d92659fcfc
|
| 3 |
+
size 51459027
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/staged/public/val.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:69c75639e81916d3b4f2a28db38d7e15c78e442748aa5bf9fed2eb3784912a70
|
| 3 |
+
size 6331589
|
syntheticSuccess/c19/bayesnet/bayesnet-c19-20260422_192809/train_20260422_192819.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9c3aaf58a023b18cf28e974d70699520a2eeb02768c612cbdf6154f76b14f372
|
| 3 |
+
size 3532
|
syntheticSuccess/c19/ctgan/ctgan-c19-20260422_031259/_ctgan_generate.py
ADDED
|
@@ -0,0 +1,18 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import sys
|
| 2 |
+
sys.path.insert(0, "/work")
|
| 3 |
+
from src.SpecificModels.ctgan_rdt_inverse_fix import apply_ctgan_inverse_fix
|
| 4 |
+
apply_ctgan_inverse_fix()
|
| 5 |
+
import pandas as pd
|
| 6 |
+
from ctgan.synthesizers.ctgan import CTGAN
|
| 7 |
+
model = CTGAN.load("/work/output-SpecializedModels/c19/ctgan/ctgan-c19-20260422_031259/models_300epochs/ctgan_300epochs.pt")
|
| 8 |
+
total = 32759
|
| 9 |
+
chunk = min(50000, total) if total > 50000 else total
|
| 10 |
+
parts = []
|
| 11 |
+
left = total
|
| 12 |
+
while left > 0:
|
| 13 |
+
take = min(chunk, left)
|
| 14 |
+
parts.append(model.sample(take))
|
| 15 |
+
left -= take
|
| 16 |
+
sampled = pd.concat(parts, ignore_index=True) if len(parts) > 1 else parts[0]
|
| 17 |
+
sampled.to_csv("/work/output-SpecializedModels/c19/ctgan/ctgan-c19-20260422_031259/ctgan-c19-32759-20260422_120804.csv", index=False)
|
| 18 |
+
print("[CTGAN] Generated", total, "rows in", len(parts), "chunks ->", "/work/output-SpecializedModels/c19/ctgan/ctgan-c19-20260422_031259/ctgan-c19-32759-20260422_120804.csv")
|
syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/_tabpfgen_generate.py
ADDED
|
@@ -0,0 +1,87 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import numpy as np
|
| 2 |
+
import pandas as pd
|
| 3 |
+
import json
|
| 4 |
+
from tabpfgen import TabPFGen
|
| 5 |
+
|
| 6 |
+
df = pd.read_csv("/work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/staged/public/train.csv")
|
| 7 |
+
target_col = "category_id"
|
| 8 |
+
|
| 9 |
+
feature_cols = [c for c in df.columns if c != target_col]
|
| 10 |
+
|
| 11 |
+
# --- Label-encode categorical / object columns ---
|
| 12 |
+
cat_encodings = {} # col -> list of unique values (index = code)
|
| 13 |
+
for col in feature_cols:
|
| 14 |
+
if df[col].dtype == object or str(df[col].dtype) == 'category':
|
| 15 |
+
cats = sorted(df[col].dropna().unique().tolist(), key=str)
|
| 16 |
+
cat_map = {v: i for i, v in enumerate(cats)}
|
| 17 |
+
df[col] = df[col].map(cat_map).astype(float)
|
| 18 |
+
cat_encodings[col] = cats
|
| 19 |
+
print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
|
| 20 |
+
|
| 21 |
+
# Encode target if categorical
|
| 22 |
+
target_cats = None
|
| 23 |
+
if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
|
| 24 |
+
cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
|
| 25 |
+
t_map = {v: i for i, v in enumerate(cats)}
|
| 26 |
+
df[target_col] = df[target_col].map(t_map).astype(float)
|
| 27 |
+
target_cats = cats
|
| 28 |
+
print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
|
| 29 |
+
|
| 30 |
+
X = df[feature_cols].values.astype(np.float32)
|
| 31 |
+
y = df[target_col].values
|
| 32 |
+
target_n = int(32759)
|
| 33 |
+
|
| 34 |
+
# Handle NaN
|
| 35 |
+
for i in range(X.shape[1]):
|
| 36 |
+
col_vals = X[:, i]
|
| 37 |
+
mask = np.isnan(col_vals)
|
| 38 |
+
if mask.any():
|
| 39 |
+
mean_val = np.nanmean(col_vals)
|
| 40 |
+
X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
|
| 41 |
+
|
| 42 |
+
gen = TabPFGen(
|
| 43 |
+
n_sgld_steps=1000,
|
| 44 |
+
sgld_step_size=0.01,
|
| 45 |
+
sgld_noise_scale=0.01,
|
| 46 |
+
device="auto",
|
| 47 |
+
)
|
| 48 |
+
|
| 49 |
+
print(f"[TabPFGen] Generating {target_n} rows via generate_regression")
|
| 50 |
+
X_syn, y_syn = gen.generate_regression(X, y, n_samples=target_n)
|
| 51 |
+
|
| 52 |
+
syn_df = pd.DataFrame(X_syn, columns=feature_cols)
|
| 53 |
+
syn_df[target_col] = y_syn
|
| 54 |
+
|
| 55 |
+
# --- Inverse label-encoding for categorical columns ---
|
| 56 |
+
for col, cats in cat_encodings.items():
|
| 57 |
+
# Round to nearest integer index, clamp to valid range
|
| 58 |
+
codes = np.round(syn_df[col].values).astype(int)
|
| 59 |
+
codes = np.clip(codes, 0, len(cats) - 1)
|
| 60 |
+
syn_df[col] = [cats[c] for c in codes]
|
| 61 |
+
|
| 62 |
+
if target_cats is not None:
|
| 63 |
+
codes = np.round(syn_df[target_col].values).astype(int)
|
| 64 |
+
codes = np.clip(codes, 0, len(target_cats) - 1)
|
| 65 |
+
syn_df[target_col] = [target_cats[c] for c in codes]
|
| 66 |
+
|
| 67 |
+
# Ensure output row count is strictly aligned with target_n.
|
| 68 |
+
if len(syn_df) > target_n:
|
| 69 |
+
print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
|
| 70 |
+
syn_df = syn_df.iloc[:target_n].copy()
|
| 71 |
+
elif len(syn_df) < target_n:
|
| 72 |
+
deficit = target_n - len(syn_df)
|
| 73 |
+
print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
|
| 74 |
+
if len(syn_df) > 0:
|
| 75 |
+
extra = syn_df.sample(n=deficit, replace=True, random_state=42)
|
| 76 |
+
syn_df = pd.concat([syn_df.reset_index(drop=True), extra.reset_index(drop=True)], ignore_index=True)
|
| 77 |
+
else:
|
| 78 |
+
# Defensive fallback: if generator returns empty, bootstrap from training rows.
|
| 79 |
+
syn_df = df[feature_cols + [target_col]].sample(
|
| 80 |
+
n=target_n, replace=True, random_state=42
|
| 81 |
+
).reset_index(drop=True)
|
| 82 |
+
|
| 83 |
+
syn_df = syn_df[list(df.columns)]
|
| 84 |
+
if len(syn_df) != target_n:
|
| 85 |
+
raise RuntimeError(f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}")
|
| 86 |
+
syn_df.to_csv("/work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv", index=False)
|
| 87 |
+
print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-SpecializedModels/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv")
|
syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/staged/public/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
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|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:092346325db7f445db2c00d2f5dd9a8397ecc33eaba7b2b14d9d48d92659fcfc
|
| 3 |
+
size 51459027
|
syntheticSuccess/c19/tabpfgen/tabpfgen-c19-20260422_200215/tabpfgen-c19-32759-20260422_200228.csv
ADDED
|
@@ -0,0 +1,3 @@
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|
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|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:f0767b1943abbb94f75c60b5e828e4130791b09dead498afbc3bc4cc1697abbc
|
| 3 |
+
size 53657638
|
syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/_tabsyn_sample.py
ADDED
|
@@ -0,0 +1,39 @@
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|
| 1 |
+
import os, sys, subprocess
|
| 2 |
+
|
| 3 |
+
work_dir = "/work/output-SpecializedModels/c19/tabsyn/tabsyn-c19-20260426_203054"
|
| 4 |
+
dataname = "tabsyn_c19"
|
| 5 |
+
output_csv = "/work/output-SpecializedModels/c19/tabsyn/tabsyn-c19-20260426_203054/tabsyn-c19-32759-20260426_205855.csv"
|
| 6 |
+
tabsyn_root = "/workspace/tabsyn"
|
| 7 |
+
|
| 8 |
+
assert os.path.exists(tabsyn_root), f"TabSyn source not mounted: {tabsyn_root}"
|
| 9 |
+
|
| 10 |
+
old = os.environ.get("PYTHONPATH", "")
|
| 11 |
+
os.environ["PYTHONPATH"] = tabsyn_root + (os.pathsep + old if old else "")
|
| 12 |
+
sys.path.insert(0, tabsyn_root)
|
| 13 |
+
|
| 14 |
+
os.chdir(tabsyn_root)
|
| 15 |
+
|
| 16 |
+
# Ensure data symlink exists
|
| 17 |
+
data_link = os.path.join(tabsyn_root, "data", dataname)
|
| 18 |
+
data_src = os.path.join(work_dir, "data", dataname)
|
| 19 |
+
os.makedirs(os.path.join(tabsyn_root, "data"), exist_ok=True)
|
| 20 |
+
if os.path.exists(data_link):
|
| 21 |
+
os.remove(data_link)
|
| 22 |
+
os.symlink(data_src, data_link)
|
| 23 |
+
|
| 24 |
+
print(f"[TabSyn] Sampling 32759 rows")
|
| 25 |
+
env = os.environ.copy()
|
| 26 |
+
env.setdefault("TABSYN_RESUME", "1")
|
| 27 |
+
ret = subprocess.run(
|
| 28 |
+
[sys.executable, "main.py",
|
| 29 |
+
"--dataname", dataname,
|
| 30 |
+
"--mode", "sample",
|
| 31 |
+
"--method", "tabsyn",
|
| 32 |
+
"--gpu", "0",
|
| 33 |
+
"--save_path", output_csv],
|
| 34 |
+
cwd=tabsyn_root,
|
| 35 |
+
env=env
|
| 36 |
+
)
|
| 37 |
+
if ret.returncode != 0:
|
| 38 |
+
sys.exit(ret.returncode)
|
| 39 |
+
print(f"[TabSyn] Saved -> {output_csv}")
|
syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/_tabsyn_train.py
ADDED
|
@@ -0,0 +1,63 @@
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import os, sys, subprocess
|
| 2 |
+
|
| 3 |
+
work_dir = "/work/output-SpecializedModels/c19/tabsyn/tabsyn-c19-20260426_203054"
|
| 4 |
+
dataname = "tabsyn_c19"
|
| 5 |
+
tabsyn_root = "/workspace/tabsyn"
|
| 6 |
+
|
| 7 |
+
assert os.path.exists(tabsyn_root), f"TabSyn source not mounted: {tabsyn_root}"
|
| 8 |
+
|
| 9 |
+
old = os.environ.get("PYTHONPATH", "")
|
| 10 |
+
os.environ["PYTHONPATH"] = tabsyn_root + (os.pathsep + old if old else "")
|
| 11 |
+
sys.path.insert(0, tabsyn_root)
|
| 12 |
+
|
| 13 |
+
os.chdir(tabsyn_root)
|
| 14 |
+
|
| 15 |
+
# Symlink data dir into TabSyn data/
|
| 16 |
+
data_link = os.path.join(tabsyn_root, "data", dataname)
|
| 17 |
+
data_src = os.path.join(work_dir, "data", dataname)
|
| 18 |
+
os.makedirs(os.path.join(tabsyn_root, "data"), exist_ok=True)
|
| 19 |
+
if os.path.exists(data_link):
|
| 20 |
+
os.remove(data_link)
|
| 21 |
+
os.symlink(data_src, data_link)
|
| 22 |
+
|
| 23 |
+
env = os.environ.copy()
|
| 24 |
+
env.setdefault("TABSYN_RESUME", "1")
|
| 25 |
+
env.setdefault("TABSYN_VAE_BATCH_SIZE", "1024")
|
| 26 |
+
_te = 1000
|
| 27 |
+
if _te is not None:
|
| 28 |
+
env["TABSYN_VAE_EPOCHS"] = str(_te)
|
| 29 |
+
env["TABSYN_DIFFUSION_MAX_EPOCHS"] = str(max(_te + 1, 2))
|
| 30 |
+
|
| 31 |
+
# Data preprocessing is done on the host side (_prepare_data_dir)
|
| 32 |
+
# which creates .npy files, train/test CSVs, and info.json
|
| 33 |
+
|
| 34 |
+
# Step 1: Train VAE (produces latent embeddings)
|
| 35 |
+
print(f"[TabSyn] Step 1/2: Training VAE in {tabsyn_root}, dataname={dataname}")
|
| 36 |
+
ret = subprocess.run(
|
| 37 |
+
[sys.executable, "main.py",
|
| 38 |
+
"--dataname", dataname,
|
| 39 |
+
"--mode", "train",
|
| 40 |
+
"--method", "vae",
|
| 41 |
+
"--gpu", "0"],
|
| 42 |
+
cwd=tabsyn_root,
|
| 43 |
+
env=env
|
| 44 |
+
)
|
| 45 |
+
if ret.returncode != 0:
|
| 46 |
+
print("[TabSyn] VAE training failed")
|
| 47 |
+
sys.exit(ret.returncode)
|
| 48 |
+
|
| 49 |
+
# Step 2: Train diffusion model on latent space
|
| 50 |
+
print(f"[TabSyn] Step 2/2: Training diffusion model")
|
| 51 |
+
ret = subprocess.run(
|
| 52 |
+
[sys.executable, "main.py",
|
| 53 |
+
"--dataname", dataname,
|
| 54 |
+
"--mode", "train",
|
| 55 |
+
"--method", "tabsyn",
|
| 56 |
+
"--gpu", "0"],
|
| 57 |
+
cwd=tabsyn_root,
|
| 58 |
+
env=env
|
| 59 |
+
)
|
| 60 |
+
if ret.returncode != 0:
|
| 61 |
+
print("[TabSyn] Diffusion training failed")
|
| 62 |
+
sys.exit(ret.returncode)
|
| 63 |
+
print("[TabSyn] Training complete (VAE + Diffusion)")
|
syntheticSuccess/c19/tabsyn/tabsyn-c19-20260426_203054/staged/public/train.csv
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:092346325db7f445db2c00d2f5dd9a8397ecc33eaba7b2b14d9d48d92659fcfc
|
| 3 |
+
size 51459027
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/_tvae_generate.py
ADDED
|
@@ -0,0 +1,18 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import sys
|
| 2 |
+
sys.path.insert(0, "/work")
|
| 3 |
+
from src.SpecificModels.ctgan_rdt_inverse_fix import apply_ctgan_inverse_fix
|
| 4 |
+
apply_ctgan_inverse_fix()
|
| 5 |
+
import pandas as pd
|
| 6 |
+
from ctgan.synthesizers.tvae import TVAE
|
| 7 |
+
model = TVAE.load("/work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/models_300epochs/tvae_300epochs.pt")
|
| 8 |
+
total = 32759
|
| 9 |
+
chunk = min(50000, total) if total > 50000 else total
|
| 10 |
+
parts = []
|
| 11 |
+
left = total
|
| 12 |
+
while left > 0:
|
| 13 |
+
take = min(chunk, left)
|
| 14 |
+
parts.append(model.sample(take))
|
| 15 |
+
left -= take
|
| 16 |
+
samples = pd.concat(parts, ignore_index=True) if len(parts) > 1 else parts[0]
|
| 17 |
+
samples.to_csv("/work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/tvae-c19-32759-20260420_023428.csv", index=False)
|
| 18 |
+
print(f"[TVAE] Generated {total} rows (chunks={len(parts)}) -> /work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/tvae-c19-32759-20260420_023428.csv")
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/_tvae_train.py
ADDED
|
@@ -0,0 +1,16 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import json, sys
|
| 2 |
+
import pandas as pd
|
| 3 |
+
from ctgan.data import read_csv
|
| 4 |
+
from ctgan.synthesizers.tvae import TVAE
|
| 5 |
+
|
| 6 |
+
csv_path = "/work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/staged/public/train.csv"
|
| 7 |
+
meta_path = "/work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/tvae_metadata.json"
|
| 8 |
+
save_path = "/work/output-SpecializedModels/c19/tvae/tvae-c19-20260328_052612/models_300epochs/tvae_300epochs.pt"
|
| 9 |
+
epochs = 300
|
| 10 |
+
|
| 11 |
+
data, discrete_columns = read_csv(csv_path, meta_path, header=True, discrete=None)
|
| 12 |
+
print(f"[TVAE] Training on {len(data)} rows, {len(data.columns)} cols, epochs={epochs}")
|
| 13 |
+
model = TVAE(epochs=epochs, batch_size=500)
|
| 14 |
+
model.fit(data, discrete_columns)
|
| 15 |
+
model.save(save_path)
|
| 16 |
+
print(f"[TVAE] Model saved -> {save_path}")
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/gen_20260419_072541.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:edab0065a1b970f7074bf3ac9b73ffb31b289e6253ba6dcabd9cc162483516ba
|
| 3 |
+
size 533
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/gen_20260420_023428.log
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:268789f568e0ee186be3f3bb4123e9556ee6c96de4cb9bfb625d15e767726951
|
| 3 |
+
size 544
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/input_snapshot.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3773432f9af837271b2e1ed3115390812b01b0c38bbaa6f15c25e0ef3ba2591e
|
| 3 |
+
size 1362
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/runtime_result.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:01562a12fc1c95957a1540ed5b2c09e0e3eb46a121e22c178608e425877cf09d
|
| 3 |
+
size 442
|
syntheticSuccess/c19/tvae/tvae-c19-20260328_052612/tvae_metadata.json
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:761007e5936a02e408256fa21d2e8db8b85fc746a47d8b03a9e4bc007150ec0e
|
| 3 |
+
size 1137
|