TabQueryBench commited on
Commit
d421cd5
·
verified ·
1 Parent(s): 2b9acc3

Add files using upload-large-folder tool

Browse files
Files changed (17) hide show
  1. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/_tabpfgen_generate.py +100 -0
  2. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/gen_20260501_041043.log +3 -0
  3. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/input_snapshot.json +3 -0
  4. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/normalized_schema_snapshot.json +3 -0
  5. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/public_gate_report.json +3 -0
  6. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/staged_input_manifest.json +3 -0
  7. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/runtime_result.json +3 -0
  8. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/staged_features.json +3 -0
  9. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/test.csv +3 -0
  10. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/train.csv +3 -0
  11. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/val.csv +3 -0
  12. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/adapter_report.json +3 -0
  13. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/adapter_transforms_applied.json +3 -0
  14. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/model_input_manifest.json +3 -0
  15. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen-n11-15215-20260501_041043.csv +3 -0
  16. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen_meta.json +3 -0
  17. syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/train_20260501_041043.log +3 -0
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/_tabpfgen_generate.py ADDED
@@ -0,0 +1,100 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import os
2
+ import numpy as np
3
+ import pandas as pd
4
+ import json
5
+ from tabpfgen import TabPFGen
6
+
7
+ df = pd.read_csv("/work/output-Benchmark-trainonly-v1/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/train.csv")
8
+ target_col = "g"
9
+
10
+ target_missing = df[target_col].isna()
11
+ if target_missing.any():
12
+ dropped = int(target_missing.sum())
13
+ df = df.loc[~target_missing].copy()
14
+ print(
15
+ f"[TabPFGen] Dropped {dropped} rows with missing target '{target_col}'"
16
+ )
17
+ if df.empty:
18
+ raise ValueError(
19
+ f"[TabPFGen] No rows remain after dropping missing target '{target_col}'"
20
+ )
21
+
22
+ feature_cols = [c for c in df.columns if c != target_col]
23
+
24
+ cat_encodings = {}
25
+ for col in feature_cols:
26
+ if df[col].dtype == object or str(df[col].dtype) == 'category':
27
+ cats = sorted(df[col].dropna().unique().tolist(), key=str)
28
+ cat_map = {v: i for i, v in enumerate(cats)}
29
+ df[col] = df[col].map(cat_map).astype(float)
30
+ cat_encodings[col] = cats
31
+ print(f"[TabPFGen] Label-encoded '{col}' ({len(cats)} categories)")
32
+
33
+ target_cats = None
34
+ if df[target_col].dtype == object or str(df[target_col].dtype) == 'category':
35
+ cats = sorted(df[target_col].dropna().unique().tolist(), key=str)
36
+ t_map = {v: i for i, v in enumerate(cats)}
37
+ df[target_col] = df[target_col].map(t_map).astype(float)
38
+ target_cats = cats
39
+ print(f"[TabPFGen] Label-encoded target '{target_col}' ({len(cats)} categories)")
40
+
41
+ X = df[feature_cols].values.astype(np.float32)
42
+ y = df[target_col].values
43
+ target_n = int(15215)
44
+
45
+ for i in range(X.shape[1]):
46
+ col_vals = X[:, i]
47
+ mask = np.isnan(col_vals)
48
+ if mask.any():
49
+ mean_val = np.nanmean(col_vals)
50
+ X[mask, i] = mean_val if not np.isnan(mean_val) else 0.0
51
+
52
+ # TabPFGen v0.1.x API:仅支持 n_sgld_steps / sgld_* / device。
53
+ # (旧版脚本中的 energy_*_chunk 与上游 TabPFGen 不一致,会导致 TypeError。)
54
+ gen = TabPFGen(
55
+ n_sgld_steps=1000,
56
+ sgld_step_size=0.01,
57
+ sgld_noise_scale=0.01,
58
+ device="auto",
59
+ )
60
+
61
+ print(f"[TabPFGen] Generating {target_n} rows via generate_classification")
62
+ X_syn, y_syn = gen.generate_classification(X, y, n_samples=target_n)
63
+
64
+ syn_df = pd.DataFrame(X_syn, columns=feature_cols)
65
+ syn_df[target_col] = y_syn
66
+
67
+ for col, cats in cat_encodings.items():
68
+ codes = np.round(syn_df[col].values).astype(int)
69
+ codes = np.clip(codes, 0, len(cats) - 1)
70
+ syn_df[col] = [cats[c] for c in codes]
71
+
72
+ if target_cats is not None:
73
+ codes = np.round(syn_df[target_col].values).astype(int)
74
+ codes = np.clip(codes, 0, len(target_cats) - 1)
75
+ syn_df[target_col] = [target_cats[c] for c in codes]
76
+
77
+ if len(syn_df) > target_n:
78
+ print(f"[TabPFGen] Trimming rows: {len(syn_df)} -> {target_n}")
79
+ syn_df = syn_df.iloc[:target_n].copy()
80
+ elif len(syn_df) < target_n:
81
+ deficit = target_n - len(syn_df)
82
+ print(f"[TabPFGen] Padding rows: {len(syn_df)} -> {target_n} (deficit={deficit})")
83
+ if len(syn_df) > 0:
84
+ extra = syn_df.sample(n=deficit, replace=True, random_state=42)
85
+ syn_df = pd.concat(
86
+ [syn_df.reset_index(drop=True), extra.reset_index(drop=True)],
87
+ ignore_index=True,
88
+ )
89
+ else:
90
+ syn_df = df[feature_cols + [target_col]].sample(
91
+ n=target_n, replace=True, random_state=42
92
+ ).reset_index(drop=True)
93
+
94
+ syn_df = syn_df[list(df.columns)]
95
+ if len(syn_df) != target_n:
96
+ raise RuntimeError(
97
+ f"[TabPFGen] Row alignment failed: got {len(syn_df)}, expected {target_n}"
98
+ )
99
+ syn_df.to_csv("/work/output-Benchmark-trainonly-v1/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen-n11-15215-20260501_041043.csv", index=False)
100
+ print(f"[TabPFGen] Saved {len(syn_df)} rows -> /work/output-Benchmark-trainonly-v1/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen-n11-15215-20260501_041043.csv")
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/gen_20260501_041043.log ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e4f771526ea006cf726f39ca24d68dd48a8ee5d854a1e0c9fda4cf5a58a18d6e
3
+ size 1008
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/input_snapshot.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:296f351f882d9b53f46d1db40acfce50e043aeb43ec06523caa71f993fe430da
3
+ size 1361
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/normalized_schema_snapshot.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:68c3209b66f9891477ccb430a3d02e3a299eb9c1a2d045bbf528bdfeb8de4fb0
3
+ size 5283
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/public_gate_report.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6336138aac04ffe8bd9b1596f9d11556e4417d85ddb950dd20c9532ef6b9fd80
3
+ size 915
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/public_gate/staged_input_manifest.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:409f563a414d12339dd60a307b52d752cab5f1ff02e3151f8f7d899d30830440
3
+ size 6109
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/runtime_result.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:606bb2e0a400d06d73e66b8b2378952eb278e37c077739e4e3100880bef50349
3
+ size 895
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/staged_features.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7ea5e7a5363e366f12e9794c57325c7f28e71ef584464c2f78fa67b80eca9a82
3
+ size 1025
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/test.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bf4e935f84569b849b662718eaa19be605037d46a5f7391f164728d6d9c3bb50
3
+ size 148017
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/train.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3ab621ac8239797506ce800c1409422452b8127da93add91dd9e6d63ddeec6f7
3
+ size 1182326
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/public/val.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:374e44edf25e58ca37eabbef0485c98cecdbdfa9d24da738937f404840bfad44
3
+ size 147784
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/adapter_report.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8a58434a7088afa5290180b08c29e5f083f5696cc3d5defc2c6990a81326d91a
3
+ size 326
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/adapter_transforms_applied.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4f53cda18c2baa0c0354bb5f9a3ecbe5ed12ab4d8e11ba873c2f11161202b945
3
+ size 2
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/staged/tabpfgen/model_input_manifest.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4b90500197062b9fbd9e96bdbd49edab9e9690bd46fdbd235e1bda309657b5c3
3
+ size 6311
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen-n11-15215-20260501_041043.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d1c321c09b6983276ef5c418e490a2bd3c5df39d9b5a3ce96baecfc0ca10f862
3
+ size 1556864
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/tabpfgen_meta.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a31e9a5b41df8a958a237f5acc1136cc545b9c4f7711e1b0c2e286be791c9602
3
+ size 446
syntheticSuccess/n11/tabpfgen/tabpfgen-n11-20260501_041043/train_20260501_041043.log ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:44e0b37f3bc90344efa38e7e431ff51921f5feade218f90087aeb795839a92a2
3
+ size 599