jialinzhang commited on
Commit
f3fe375
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1 Parent(s): 8cc337d

Add syntheticSuccess n3

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  1. syntheticSuccess/n3/arf/arf-n3-20260501_225023/_arf_generate.py +93 -0
  2. syntheticSuccess/n3/arf/arf-n3-20260501_225023/_arf_train.py +37 -0
  3. syntheticSuccess/n3/arf/arf-n3-20260501_225023/arf-n3-3918-20260501_225052.csv +3 -0
  4. syntheticSuccess/n3/arf/arf-n3-20260501_225023/arf_model.pkl +3 -0
  5. syntheticSuccess/n3/arf/arf-n3-20260501_225023/gen_20260501_225052.log +3 -0
  6. syntheticSuccess/n3/arf/arf-n3-20260501_225023/input_snapshot.json +36 -0
  7. syntheticSuccess/n3/arf/arf-n3-20260501_225023/public_gate/normalized_schema_snapshot.json +259 -0
  8. syntheticSuccess/n3/arf/arf-n3-20260501_225023/public_gate/public_gate_report.json +37 -0
  9. syntheticSuccess/n3/arf/arf-n3-20260501_225023/public_gate/staged_input_manifest.json +264 -0
  10. syntheticSuccess/n3/arf/arf-n3-20260501_225023/runtime_result.json +27 -0
  11. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/arf/adapter_report.json +7 -0
  12. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/arf/adapter_transforms_applied.json +1 -0
  13. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/arf/model_input_manifest.json +266 -0
  14. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/staged_features.json +62 -0
  15. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/test.csv +3 -0
  16. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/train.csv +3 -0
  17. syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/val.csv +3 -0
  18. syntheticSuccess/n3/arf/arf-n3-20260501_225023/train_20260501_225023.log +3 -0
  19. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/_bayesnet_generate.py +105 -0
  20. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/_bayesnet_train.py +133 -0
  21. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet-n3-3918-20260501_225112.csv +3 -0
  22. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_coltypes.json +53 -0
  23. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_model.pkl +3 -0
  24. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/const_cols.json +1 -0
  25. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/gen_20260501_225112.log +3 -0
  26. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/input_snapshot.json +36 -0
  27. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/public_gate/normalized_schema_snapshot.json +259 -0
  28. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/public_gate/public_gate_report.json +37 -0
  29. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/public_gate/staged_input_manifest.json +264 -0
  30. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/runtime_result.json +27 -0
  31. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/bayesnet/adapter_report.json +7 -0
  32. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/bayesnet/adapter_transforms_applied.json +1 -0
  33. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/bayesnet/model_input_manifest.json +266 -0
  34. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/public/staged_features.json +62 -0
  35. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/public/test.csv +3 -0
  36. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/public/train.csv +3 -0
  37. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/staged/public/val.csv +3 -0
  38. syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/train_20260501_225104.log +3 -0
  39. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_X_host.npy +3 -0
  40. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_gen.py +8 -0
  41. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_meta_host.json +1 -0
  42. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_train.py +28 -0
  43. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/forest-n3-3918-20260501_180740.csv +3 -0
  44. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/forestdiffusion_model.joblib +3 -0
  45. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/gen_20260501_180740.log +3 -0
  46. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/input_snapshot.json +36 -0
  47. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/models_fd/model.joblib +3 -0
  48. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/public_gate/normalized_schema_snapshot.json +259 -0
  49. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/public_gate/public_gate_report.json +37 -0
  50. syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/public_gate/staged_input_manifest.json +264 -0
syntheticSuccess/n3/arf/arf-n3-20260501_225023/_arf_generate.py ADDED
@@ -0,0 +1,93 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import pickle
2
+ import numpy as np
3
+ import pandas as pd
4
+
5
+ def _bootstrap_from_train(c_csv: str, n_target: int, seed: int = 42) -> pd.DataFrame:
6
+ """当 arfpy.forge 完全不可用时,从训练 CSV 有放回抽样,保证行数与列对齐。"""
7
+ src = pd.read_csv(c_csv, encoding="utf-8-sig", low_memory=False)
8
+ src = src.replace([np.inf, -np.inf], np.nan).dropna(axis=1, how="all")
9
+ src = src.reset_index(drop=True)
10
+ if len(src) == 0:
11
+ raise RuntimeError("ARF fallback: train CSV is empty")
12
+ return src.sample(n=n_target, replace=True, random_state=seed).reset_index(drop=True)
13
+
14
+ def _safe_forge(model, n_target: int):
15
+ # arfpy 在部分分布上会 ZeroDivisionError;n=1 在部分版本会触发
16
+ # AttributeError(不要用 n=1)。失败返回 None,由外层走 bootstrap。
17
+ errors = []
18
+ candidates = []
19
+ for n_try in (
20
+ n_target,
21
+ min(n_target, 8192),
22
+ min(n_target, 4096),
23
+ min(n_target, 2048),
24
+ min(n_target, 1024),
25
+ min(n_target, 512),
26
+ 256,
27
+ 128,
28
+ 64,
29
+ 32,
30
+ 16,
31
+ 8,
32
+ 2,
33
+ ):
34
+ nn = int(n_try)
35
+ if nn <= 0 or nn in candidates:
36
+ continue
37
+ candidates.append(nn)
38
+ for n_try in candidates:
39
+ try:
40
+ out = model.forge(n=n_try).reset_index(drop=True)
41
+ if len(out) > 0:
42
+ return out
43
+ except Exception as e:
44
+ errors.append(f"n={n_try}: {type(e).__name__}: {e}")
45
+ print("[ARF] forge failed after retries; last errors:", " | ".join(errors[-4:]))
46
+ return None
47
+
48
+ n_target = int(3918)
49
+ c_csv = "/work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/train.csv"
50
+ with open("/work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/arf_model.pkl", "rb") as f:
51
+ model = pickle.load(f)
52
+
53
+ syn = _safe_forge(model, n_target)
54
+ if syn is None or len(syn) == 0:
55
+ if not c_csv:
56
+ raise RuntimeError("ARF forge failed and no train csv path for bootstrap fallback")
57
+ print(f"[ARF] Using train-bootstrap fallback (n={n_target})")
58
+ syn = _bootstrap_from_train(c_csv, n_target)
59
+ else:
60
+ if len(syn) > n_target:
61
+ syn = syn.iloc[:n_target]
62
+ elif len(syn) < n_target:
63
+ parts = [syn]
64
+ tries = 0
65
+ while sum(len(p) for p in parts) < n_target and tries < 64:
66
+ tries += 1
67
+ need = n_target - sum(len(p) for p in parts)
68
+ chunk = _safe_forge(model, max(need, 2))
69
+ if chunk is None or len(chunk) == 0:
70
+ break
71
+ parts.append(chunk)
72
+ syn = pd.concat(parts, ignore_index=True).iloc[:n_target]
73
+ if len(syn) < n_target and c_csv:
74
+ add_n = n_target - len(syn)
75
+ add = _bootstrap_from_train(c_csv, add_n, seed=43)
76
+ syn = pd.concat([syn, add], ignore_index=True).iloc[:n_target]
77
+
78
+ _ds_id = 'n3'
79
+ if _ds_id == "c19":
80
+ # 仅 c19:object 列内裸换行会使 pivot 用 csv.reader 统计到的「记录数」大于 DataFrame 行数 → Sw。
81
+ for _col in syn.columns:
82
+ if syn[_col].dtype == object:
83
+ syn[_col] = (
84
+ syn[_col]
85
+ .astype(str)
86
+ .str.replace("\r\n", " ", regex=False)
87
+ .str.replace("\n", " ", regex=False)
88
+ .str.replace("\r", " ", regex=False)
89
+ )
90
+ syn = syn.iloc[:n_target].reset_index(drop=True)
91
+
92
+ syn.to_csv("/work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/arf-n3-3918-20260501_225052.csv", index=False)
93
+ print(f"[ARF] Generated {len(syn)} rows (requested {n_target}) -> /work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/arf-n3-3918-20260501_225052.csv")
syntheticSuccess/n3/arf/arf-n3-20260501_225023/_arf_train.py ADDED
@@ -0,0 +1,37 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ import pickle
2
+ import numpy as np
3
+ import pandas as pd
4
+ from arfpy import arf
5
+
6
+ def _sanitize_for_arf(df: pd.DataFrame) -> pd.DataFrame:
7
+ """缓解 forge 阶段 scipy.stats.truncnorm / 除零:处理 inf、NaN 与极端尾部。"""
8
+ df = df.replace([np.inf, -np.inf], np.nan)
9
+ df = df.dropna(axis=1, how="all")
10
+ for col in df.select_dtypes(include=[np.number]).columns:
11
+ med = df[col].median()
12
+ if pd.isna(med):
13
+ med = 0.0
14
+ df[col] = df[col].fillna(med)
15
+ nu = int(df[col].nunique(dropna=True))
16
+ if nu <= 1:
17
+ continue
18
+ lo, hi = df[col].quantile(0.001), df[col].quantile(0.999)
19
+ if pd.notna(lo) and pd.notna(hi) and lo < hi:
20
+ df[col] = df[col].clip(lo, hi)
21
+ return df
22
+
23
+ df = pd.read_csv("/work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/train.csv")
24
+ df = _sanitize_for_arf(df)
25
+ print(f"[ARF] Training on {len(df)} rows, {len(df.columns)} cols")
26
+
27
+ model = arf.arf(x=df)
28
+ if hasattr(model, "fit"):
29
+ model.fit()
30
+ elif hasattr(model, "forde"):
31
+ model.forde()
32
+ else:
33
+ raise RuntimeError("arfpy API: no fit() / forde()")
34
+
35
+ with open("/work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/arf_model.pkl", "wb") as f:
36
+ pickle.dump(model, f)
37
+ print(f"[ARF] Model saved -> /work/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/arf_model.pkl")
syntheticSuccess/n3/arf/arf-n3-20260501_225023/arf-n3-3918-20260501_225052.csv ADDED
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+ size 876973
syntheticSuccess/n3/arf/arf-n3-20260501_225023/arf_model.pkl ADDED
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+ {
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+ "dataset_id": "n3",
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+ "model": "arf",
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syntheticSuccess/n3/arf/arf-n3-20260501_225023/public_gate/normalized_schema_snapshot.json ADDED
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+ "missing_tokens": [],
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+ "0.98975",
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+ "0.99705"
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+ ]
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+ },
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+ {
176
+ "name": "pH",
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+ "role": "feature",
178
+ "semantic_type": "numeric",
179
+ "nullable": false,
180
+ "missing_tokens": [],
181
+ "parse_format": null,
182
+ "impute_strategy": "median",
183
+ "profile_stats": {
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+ "missing_rate": 0.0,
185
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+ "example_values": [
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+ "3.37",
191
+ "3.21",
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+ "3.16"
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+ ]
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+ }
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+ },
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+ {
197
+ "name": "sulphates",
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+ "role": "feature",
199
+ "semantic_type": "numeric",
200
+ "nullable": false,
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+ "missing_tokens": [],
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+ "parse_format": null,
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+ "impute_strategy": "median",
204
+ "profile_stats": {
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+ "missing_rate": 0.0,
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+ "unique_count": 78,
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+ "unique_ratio": 0.019908,
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+ "example_values": [
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+ "0.4",
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+ "0.53",
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+ "0.66",
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+ "0.47",
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+ "0.5"
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+ ]
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+ }
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+ },
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+ {
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+ "name": "alcohol",
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+ "role": "feature",
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+ "semantic_type": "numeric",
221
+ "nullable": false,
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+ "missing_tokens": [],
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+ "parse_format": null,
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+ "impute_strategy": "median",
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+ "profile_stats": {
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+ "missing_rate": 0.0,
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+ "unique_count": 97,
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+ "unique_ratio": 0.024758,
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+ "example_values": [
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+ "9.6",
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+ "9.7",
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+ "11.7",
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+ "13.4",
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+ "8.8"
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+ ]
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+ },
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+ {
239
+ "name": "quality",
240
+ "role": "target",
241
+ "semantic_type": "numeric",
242
+ "nullable": false,
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+ "missing_tokens": [],
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+ "parse_format": null,
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+ "impute_strategy": "median",
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+ "profile_stats": {
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+ "missing_rate": 0.0,
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+ "unique_count": 7,
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+ "unique_ratio": 0.001787,
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+ "example_values": [
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+ "5",
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+ "7",
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+ "8",
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+ "3"
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+ ]
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+ }
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+ }
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+ ],
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261
+ "train_csv": "/data/jialinzhang/SynthesizePipeline-server/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/train.csv",
262
+ "val_csv": "/data/jialinzhang/SynthesizePipeline-server/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/val.csv",
263
+ "test_csv": "/data/jialinzhang/SynthesizePipeline-server/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/test.csv",
264
+ "features_json": "/data/jialinzhang/SynthesizePipeline-server/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/staged/public/staged_features.json",
265
+ "public_gate_report": "/data/jialinzhang/SynthesizePipeline-server/output-Benchmark-trainonly-v1/n3/arf/arf-n3-20260501_225023/public_gate/public_gate_report.json"
266
+ }
syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/staged_features.json ADDED
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1
+ [
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3
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4
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7
+ {
8
+ "feature_name": "volatile acidity",
9
+ "data_type": "continuous",
10
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11
+ },
12
+ {
13
+ "feature_name": "citric acid",
14
+ "data_type": "continuous",
15
+ "is_target": false
16
+ },
17
+ {
18
+ "feature_name": "residual sugar",
19
+ "data_type": "continuous",
20
+ "is_target": false
21
+ },
22
+ {
23
+ "feature_name": "chlorides",
24
+ "data_type": "continuous",
25
+ "is_target": false
26
+ },
27
+ {
28
+ "feature_name": "free sulfur dioxide",
29
+ "data_type": "continuous",
30
+ "is_target": false
31
+ },
32
+ {
33
+ "feature_name": "total sulfur dioxide",
34
+ "data_type": "continuous",
35
+ "is_target": false
36
+ },
37
+ {
38
+ "feature_name": "density",
39
+ "data_type": "continuous",
40
+ "is_target": false
41
+ },
42
+ {
43
+ "feature_name": "pH",
44
+ "data_type": "continuous",
45
+ "is_target": false
46
+ },
47
+ {
48
+ "feature_name": "sulphates",
49
+ "data_type": "continuous",
50
+ "is_target": false
51
+ },
52
+ {
53
+ "feature_name": "alcohol",
54
+ "data_type": "continuous",
55
+ "is_target": false
56
+ },
57
+ {
58
+ "feature_name": "quality",
59
+ "data_type": "continuous",
60
+ "is_target": true
61
+ }
62
+ ]
syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/test.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
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syntheticSuccess/n3/arf/arf-n3-20260501_225023/staged/public/train.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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syntheticSuccess/n3/arf/arf-n3-20260501_225023/train_20260501_225023.log ADDED
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syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/_bayesnet_generate.py ADDED
@@ -0,0 +1,105 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+
2
+ import pickle
3
+ import subprocess
4
+ import sys
5
+ import warnings
6
+
7
+ import numpy as np
8
+ import pandas as pd
9
+ from pgmpy.sampling import BayesianModelSampling
10
+
11
+ warnings.filterwarnings("ignore", category=FutureWarning)
12
+
13
+ def _ensure_cloudpickle():
14
+ try:
15
+ import cloudpickle # noqa: F401
16
+ except ModuleNotFoundError:
17
+ subprocess.check_call(
18
+ [sys.executable, "-m", "pip", "install", "--quiet", "cloudpickle"],
19
+ )
20
+
21
+ _ensure_cloudpickle()
22
+
23
+ with open("/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_model.pkl", "rb") as f:
24
+ bundle = pickle.load(f)
25
+
26
+ network = bundle["network"]
27
+ inverse = bundle["inverse"]
28
+ cols = bundle["column_order"]
29
+ integer_columns = set(bundle.get("integer_columns") or [])
30
+ full_order = bundle.get("full_column_order") or cols
31
+ const_cols = bundle.get("const_cols") or {}
32
+
33
+ num_rows = int(3918)
34
+ sampler = BayesianModelSampling(network)
35
+ raw = sampler.forward_sample(size=num_rows, show_progress=False)
36
+ raw = raw.reset_index(drop=True)
37
+ if len(raw) > num_rows:
38
+ raw = raw.iloc[:num_rows]
39
+ _tries = 0
40
+ while len(raw) < num_rows and _tries < 64:
41
+ _tries += 1
42
+ nextra = min(10000, num_rows - len(raw))
43
+ more = sampler.forward_sample(size=max(nextra, 1), show_progress=False)
44
+ more = more.reset_index(drop=True)
45
+ if len(more) == 0:
46
+ break
47
+ raw = pd.concat([raw, more], ignore_index=True)
48
+ if len(raw) > num_rows:
49
+ raw = raw.iloc[:num_rows]
50
+
51
+ out = pd.DataFrame(index=raw.index)
52
+ rng = np.random.default_rng()
53
+
54
+ for c in cols:
55
+ if c in inverse["categorical"]:
56
+ levels = inverse["categorical"][c]
57
+ idx = raw[c].astype(int).to_numpy()
58
+ idx = np.clip(idx, 0, max(0, len(levels) - 1))
59
+ out[c] = [levels[i] for i in idx]
60
+ else:
61
+ edges = np.asarray(inverse["continuous"][c], dtype=float)
62
+ if edges.size < 2:
63
+ out[c] = 0.0
64
+ else:
65
+ nbin = edges.size - 1
66
+ res = []
67
+ for k in raw[c].astype(int).to_numpy():
68
+ k = int(k)
69
+ if k < 0:
70
+ k = 0
71
+ if k >= nbin:
72
+ k = nbin - 1
73
+ lo, hi = float(edges[k]), float(edges[k + 1])
74
+ if hi < lo:
75
+ lo, hi = hi, lo
76
+ v = rng.uniform(lo, hi)
77
+ if c in integer_columns:
78
+ v = int(round(v))
79
+ res.append(v)
80
+ out[c] = res
81
+
82
+ final = pd.DataFrame(index=out.index)
83
+ for c in full_order:
84
+ if c in const_cols:
85
+ final[c] = const_cols[c]
86
+ elif c in out.columns:
87
+ final[c] = out[c]
88
+
89
+ dtypes = bundle.get("original_dtypes") or {}
90
+ for c, dts in dtypes.items():
91
+ if c not in final.columns:
92
+ continue
93
+ try:
94
+ if "int" in dts:
95
+ final[c] = pd.to_numeric(final[c], errors="coerce").astype("Int64")
96
+ elif "float" in dts:
97
+ final[c] = pd.to_numeric(final[c], errors="coerce")
98
+ except Exception:
99
+ pass
100
+
101
+ if len(final) != num_rows:
102
+ final = final.iloc[:num_rows].copy()
103
+ final = final.reset_index(drop=True)
104
+ final.to_csv("/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet-n3-3918-20260501_225112.csv", index=False)
105
+ print(f"[BayesNet] Generated {len(final)} rows (requested {num_rows}) -> /work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet-n3-3918-20260501_225112.csv")
syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/_bayesnet_train.py ADDED
@@ -0,0 +1,133 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+
2
+ import json
3
+ import pickle
4
+ import subprocess
5
+ import sys
6
+ import warnings
7
+
8
+ import numpy as np
9
+ import pandas as pd
10
+ from pgmpy.estimators import TreeSearch
11
+ from pgmpy.models import DiscreteBayesianNetwork
12
+ warnings.filterwarnings("ignore", category=FutureWarning)
13
+
14
+ def _ensure_cloudpickle():
15
+ try:
16
+ import cloudpickle # noqa: F401
17
+ except ModuleNotFoundError:
18
+ subprocess.check_call(
19
+ [sys.executable, "-m", "pip", "install", "--quiet", "cloudpickle"],
20
+ )
21
+
22
+ _ensure_cloudpickle()
23
+
24
+ with open("/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_coltypes.json", "r", encoding="utf-8") as _f:
25
+ colmeta = json.load(_f)
26
+ integer_columns = set(colmeta.get("integer_columns") or [])
27
+
28
+ df = pd.read_csv("/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/staged/public/train.csv")
29
+ df = df.dropna(axis=1, how="all")
30
+ full_column_order = list(df.columns)
31
+
32
+ const_cols = {}
33
+ for col in list(df.columns):
34
+ if df[col].nunique(dropna=True) <= 1:
35
+ const_cols[col] = df[col].iloc[0] if len(df) > 0 else None
36
+ df = df.drop(columns=[col])
37
+ print(f"[BayesNet] Dropped zero-variance column '{col}'")
38
+
39
+ const_path = "/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_model.pkl".replace("bayesnet_model.pkl", "const_cols.json")
40
+ with open(const_path, "w", encoding="utf-8") as _f:
41
+ json.dump({k: str(v) for k, v in const_cols.items()}, _f)
42
+
43
+ inverse = {"categorical": {}, "continuous": {}}
44
+ enc = pd.DataFrame(index=df.index)
45
+ _n_samples = len(df)
46
+ _n_plan = sum(
47
+ 1 for e in colmeta["columns"] if str(e.get("name", "")) in df.columns
48
+ )
49
+ max_bins = 10
50
+ max_cat_levels = 256
51
+ if _n_plan > 35 or _n_samples > 200000:
52
+ max_bins = 5
53
+ max_cat_levels = 64
54
+ if _n_plan > 55:
55
+ max_bins = 4
56
+ max_cat_levels = 32
57
+ print(
58
+ f"[BayesNet] max_bins={max_bins}, max_cat_levels={max_cat_levels} "
59
+ f"(cols_in_df={_n_plan}, rows={_n_samples})"
60
+ )
61
+
62
+ for entry in colmeta["columns"]:
63
+ name = entry["name"]
64
+ if name not in df.columns:
65
+ continue
66
+ kind = entry["type"]
67
+ s = df[name]
68
+ if kind == "categorical":
69
+ s2 = s.astype(str).fillna("__NA__")
70
+ counts = s2.value_counts(dropna=False)
71
+ if len(counts) > max_cat_levels:
72
+ keep = set(counts.index[: max_cat_levels - 1].tolist())
73
+ s2 = s2.map(lambda x: x if x in keep else "__OTHER__")
74
+ uniques = sorted(s2.dropna().unique(), key=lambda x: str(x))
75
+ mapping = {str(v): i for i, v in enumerate(uniques)}
76
+ inverse["categorical"][name] = [uniques[i] for i in range(len(uniques))]
77
+ enc[name] = s2.map(lambda x, m=mapping: m.get(str(x), 0)).astype(int)
78
+ else:
79
+ s_num = pd.to_numeric(s, errors="coerce")
80
+ nu = int(s_num.nunique(dropna=True))
81
+ q = min(max_bins, max(2, nu))
82
+ if nu < 2:
83
+ enc[name] = np.zeros(len(s_num), dtype=int)
84
+ lo, hi = float(s_num.min()), float(s_num.max())
85
+ inverse["continuous"][name] = [lo, hi]
86
+ else:
87
+ try:
88
+ _, bins = pd.qcut(
89
+ s_num, q=q, retbins=True, duplicates="drop"
90
+ )
91
+ except Exception:
92
+ med = float(s_num.median())
93
+ s2 = s_num.fillna(med)
94
+ _, bins = pd.qcut(
95
+ s2, q=min(q, 3), retbins=True, duplicates="drop"
96
+ )
97
+ bins = np.asarray(bins, dtype=float)
98
+ lab = pd.cut(
99
+ s_num, bins=bins, labels=False, include_lowest=True
100
+ )
101
+ enc[name] = lab.fillna(0).astype(int)
102
+ inverse["continuous"][name] = bins.tolist()
103
+
104
+ print(f"[BayesNet] Training on {len(enc)} rows, {len(enc.columns)} cols (encoded)")
105
+
106
+ enc_struct = enc
107
+ if len(enc) > 25000:
108
+ enc_struct = enc.sample(n=25000, random_state=0, replace=False)
109
+ print(f"[BayesNet] TreeSearch on {len(enc_struct)} rows (subsample; full n={len(enc)})")
110
+ dag = TreeSearch(enc_struct).estimate(show_progress=False)
111
+ for col in enc.columns:
112
+ if col not in dag.nodes():
113
+ dag.add_node(col)
114
+ print(f"[BayesNet] Added isolated node to DAG: {col}")
115
+ network = DiscreteBayesianNetwork(dag)
116
+ enc_fit = enc
117
+ if len(enc) > 120000:
118
+ enc_fit = enc.sample(n=120000, random_state=1, replace=False)
119
+ print(f"[BayesNet] fit() on {len(enc_fit)} rows (full n={len(enc)})")
120
+ network.fit(enc_fit)
121
+
122
+ bundle = {
123
+ "network": network,
124
+ "inverse": inverse,
125
+ "column_order": list(enc.columns),
126
+ "full_column_order": full_column_order,
127
+ "integer_columns": list(integer_columns),
128
+ "original_dtypes": {c: str(df[c].dtype) for c in enc.columns},
129
+ "const_cols": const_cols,
130
+ }
131
+ with open("/work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_model.pkl", "wb") as _f:
132
+ pickle.dump(bundle, _f)
133
+ print(f"[BayesNet] Model saved -> /work/output-Benchmark-trainonly-v1/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_model.pkl")
syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet-n3-3918-20260501_225112.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:7eaef9af040116c7fea3c8e5e566ea772624f1e1548c99fa7b800a0deeac3f44
3
+ size 884307
syntheticSuccess/n3/bayesnet/bayesnet-n3-20260501_225103/bayesnet_coltypes.json ADDED
@@ -0,0 +1,53 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "columns": [
3
+ {
4
+ "name": "fixed acidity",
5
+ "type": "continuous"
6
+ },
7
+ {
8
+ "name": "volatile acidity",
9
+ "type": "continuous"
10
+ },
11
+ {
12
+ "name": "citric acid",
13
+ "type": "continuous"
14
+ },
15
+ {
16
+ "name": "residual sugar",
17
+ "type": "continuous"
18
+ },
19
+ {
20
+ "name": "chlorides",
21
+ "type": "continuous"
22
+ },
23
+ {
24
+ "name": "free sulfur dioxide",
25
+ "type": "continuous"
26
+ },
27
+ {
28
+ "name": "total sulfur dioxide",
29
+ "type": "continuous"
30
+ },
31
+ {
32
+ "name": "density",
33
+ "type": "continuous"
34
+ },
35
+ {
36
+ "name": "pH",
37
+ "type": "continuous"
38
+ },
39
+ {
40
+ "name": "sulphates",
41
+ "type": "continuous"
42
+ },
43
+ {
44
+ "name": "alcohol",
45
+ "type": "continuous"
46
+ },
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+
2
+ import joblib, pandas as pd
3
+ m, meta = joblib.load(r'/work/output-Benchmark-trainonly-v1/n3/forestdiffusion/forest-n3-20260501_180619/forestdiffusion_model.joblib')
4
+ # generate:batch_size 为样本数
5
+ arr = m.generate(batch_size=int(3918))
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+ df = pd.DataFrame(arr, columns=meta["column_names"])
7
+ df.to_csv(r'/work/output-Benchmark-trainonly-v1/n3/forestdiffusion/forest-n3-20260501_180619/forest-n3-3918-20260501_180740.csv', index=False)
8
+ print("saved", len(df))
syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_meta_host.json ADDED
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+ {"column_names": ["fixed acidity", "volatile acidity", "citric acid", "residual sugar", "chlorides", "free sulfur dioxide", "total sulfur dioxide", "density", "pH", "sulphates", "alcohol", "quality"], "cat_indexes": []}
syntheticSuccess/n3/forestdiffusion/forest-n3-20260501_180619/_fd_train.py ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+
2
+ import shutil, json
3
+ shutil.copy(r'/work/output-Benchmark-trainonly-v1/n3/forestdiffusion/forest-n3-20260501_180619/_fd_X_host.npy', '/tmp/fd_X.npy')
4
+ with open(r'/work/output-Benchmark-trainonly-v1/n3/forestdiffusion/forest-n3-20260501_180619/_fd_meta_host.json') as f:
5
+ open('/tmp/fd_meta.json','w').write(f.read())
6
+
7
+ import numpy as np, joblib, json, os
8
+ from ForestDiffusion import ForestDiffusionModel
9
+ X = np.load("/tmp/fd_X.npy")
10
+ with open("/tmp/fd_meta.json") as f:
11
+ meta = json.load(f)
12
+ cat_indexes = meta["cat_indexes"]
13
+ print(
14
+ "[ForestDiffusion] train config: "
15
+ f"rows={X.shape[0]} cols={X.shape[1]} n_t=20 "
16
+ f"n_estimators=100 duplicate_K=20 n_jobs=2 "
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+ f"xgb_verbosity=1",
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+ flush=True,
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+ )
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+ m = ForestDiffusionModel(
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+ X, n_t=20, n_estimators=100, duplicate_K=20, n_jobs=2,
22
+ model="xgboost", max_depth=6, tree_method="hist", cat_indexes=cat_indexes,
23
+ verbosity=1,
24
+ )
25
+ joblib.dump((m, meta), "/tmp/fd_model.joblib")
26
+ print("ForestDiffusion train OK")
27
+
28
+ shutil.copy('/tmp/fd_model.joblib', r'/work/output-Benchmark-trainonly-v1/n3/forestdiffusion/forest-n3-20260501_180619/forestdiffusion_model.joblib')
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