MedSPOT / Annotations /ITKsnap_Annotation.json
Tajamul21's picture
Uploaded the Annotation and Image Folder (#1)
8b1bf91
{
"tasks": [
{
"task_overview": "Open a main DICOM image series in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_1.png",
"instruction": "Click on the 'File' menu.",
"actions": [
{
"type": "click",
"target": "file_menu",
"bbox": [
0.22,
2.83,
2.01,
1.89
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_2.png",
"instruction": "Click on 'Open Main Image...'.",
"actions": [
{
"type": "click",
"target": "open_main_image_option",
"bbox": [
0.78,
5.61,
19.01,
1.87
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_3.png",
"instruction": "Click on the 'Browse...' button.",
"actions": [
{
"type": "click",
"target": "browse_button",
"bbox": [
53.87,
44.36,
4.92,
2.44
]
}
]
},
{
"step_id": 4,
"image_path": "Images/ITKsnap/MI_4.png",
"instruction": "Select the DICOM file from the file explorer.",
"actions": [
{
"type": "click",
"target": "select_dicom_file",
"bbox": [
45.03,
46.75,
9.16,
2.25
]
}
]
},
{
"step_id": 5,
"image_path": "Images/ITKsnap/MI_5.png",
"instruction": "Click on the 'Open' button.",
"actions": [
{
"type": "click",
"target": "open_explorer_button",
"bbox": [
69.73,
77.86,
5.03,
2.06
]
}
]
},
{
"step_id": 6,
"image_path": "Images/ITKsnap/MI_6.png",
"instruction": "Click on the 'Next >' button.",
"actions": [
{
"type": "click",
"target": "next_button",
"bbox": [
54.41,
66.39,
4.47,
1.88
]
}
]
},
{
"step_id": 7,
"image_path": "Images/ITKsnap/MI_7.png",
"instruction": "Click on the 'Next >' button to confirm the series.",
"actions": [
{
"type": "click",
"target": "next_button_confirm",
"bbox": [
54.3,
65.94,
4.8,
2.83
]
}
]
},
{
"step_id": 8,
"image_path": "Images/ITKsnap/MI_8.png",
"instruction": "Click on the 'Finish' button.",
"actions": [
{
"type": "click",
"target": "finish_button",
"bbox": [
54.3,
65.9,
4.92,
2.63
]
}
]
}
]
},
{
"task_overview": "Check for software updates in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_9.png",
"instruction": "Click on the 'Help' menu.",
"actions": [
{
"type": "click",
"target": "help_menu",
"bbox": [
19.11,
2.63,
2.23,
2.44
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_10.png",
"instruction": "Click on 'Check for Updates'.",
"actions": [
{
"type": "click",
"target": "check_updates_option",
"bbox": [
19.11,
8.44,
14.3,
2.25
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_11.png",
"instruction": "Click on the 'OK' button.",
"actions": [
{
"type": "click",
"target": "ok_button",
"bbox": [
53.74,
51.44,
5.03,
2.82
]
}
]
}
]
},
{
"task_overview": "View the image metadata in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_12.png",
"instruction": "Click on the 'Tools' menu.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
16.09,
2.63,
2.68,
2.44
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_13.png",
"instruction": "Click on 'Image Inspector'.",
"actions": [
{
"type": "click",
"target": "image_inspector_option",
"bbox": [
16.54,
5.45,
21.35,
2.44
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_14.png",
"instruction": "Click on the 'Metadata' tab.",
"actions": [
{
"type": "click",
"target": "metadata_tab",
"bbox": [
59.12,
21.62,
4.81,
2.82
]
}
]
}
]
},
{
"task_overview": "Auto-adjust the image contrast in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_15.png",
"instruction": "Click on the 'Tools' menu.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.98,
2.63,
2.79,
2.63
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_16.png",
"instruction": "Hover over 'Image Contrast'.",
"actions": [
{
"type": "hover",
"target": "image_contrast_menu",
"bbox": [
16.32,
8.47,
21.13,
2.26
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_17.png",
"instruction": "Click on 'Auto-Adjust Contrast (all layers)'.",
"actions": [
{
"type": "click",
"target": "auto_adjust_option",
"bbox": [
37.88,
11.07,
19.33,
2.44
]
}
]
}
]
},
{
"task_overview": "Reset the image contrast in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_18.png",
"instruction": "Click on the 'Tools' menu.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.98,
2.82,
2.79,
2.44
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_19.png",
"instruction": "Hover over 'Image Contrast'.",
"actions": [
{
"type": "hover",
"target": "image_contrast_menu",
"bbox": [
16.31,
8.46,
21.23,
2.45
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_20.png",
"instruction": "Click on 'Reset Contrast (all layers)'.",
"actions": [
{
"type": "click",
"target": "reset_contrast_option",
"bbox": [
37.88,
13.92,
19.44,
2.26
]
}
]
}
]
},
{
"task_overview": "Export an image slice as a PNG file.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_21.png",
"instruction": "Click on the 'File' menu.",
"actions": [
{
"type": "click",
"target": "file_menu",
"bbox": [
0.11,
3.0,
2.35,
1.88
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_22.png",
"instruction": "Hover over 'Export'.",
"actions": [
{
"type": "hover",
"target": "export_menu",
"bbox": [
0.56,
22.56,
19.22,
2.63
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_23.png",
"instruction": "Hover over 'Image Slice'.",
"actions": [
{
"type": "hover",
"target": "image_slice_submenu",
"bbox": [
20.13,
22.89,
10.17,
2.25
]
}
]
},
{
"step_id": 4,
"image_path": "Images/ITKsnap/MI_24.png",
"instruction": "Click on 'Axial'.",
"actions": [
{
"type": "click",
"target": "axial_export_option",
"bbox": [
30.73,
22.93,
7.26,
2.26
]
}
]
},
{
"step_id": 5,
"image_path": "Images/ITKsnap/MI_25.png",
"instruction": "Click 'OK' in the Save Slice dialog.",
"actions": [
{
"type": "click",
"target": "ok_save_button",
"bbox": [
51.08,
59.21,
5.14,
2.82
]
}
]
}
]
},
{
"task_overview": "Save a segmentation image in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_26.png",
"instruction": "Click on the 'Segmentation' menu.",
"actions": [
{
"type": "click",
"target": "segmentation_menu",
"bbox": [
5.05,
2.63,
6.41,
2.45
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_27.png",
"instruction": "Select 'Save Segmentation Image...'.",
"actions": [
{
"type": "click",
"target": "save_segmentation_option",
"bbox": [
5.52,
11.23,
22.3,
2.45
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_28.png",
"instruction": "Click the 'Finish' button.",
"actions": [
{
"type": "click",
"target": "finish_button",
"bbox": [
54.3,
65.9,
4.92,
2.63
]
}
]
}
]
},
{
"task_overview": "Adjust the image zoom level to 1x in ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_29.png",
"instruction": "Click on the magnifying glass icon in the left toolbar to open the Zoom Inspector.",
"actions": [
{
"type": "click",
"target": "zoom_inspector_icon",
"bbox": [
10.51,
6.42,
2.5,
2.72
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_30.png",
"instruction": "Select the '1x' zoom level in the Zoom Inspector.",
"actions": [
{
"type": "click",
"target": "zoom_1x_button",
"bbox": [
2.35,
31.96,
2.14,
2.37
]
}
]
}
]
},
{
"task_overview": "Quit ITK-SNAP.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_31.png",
"instruction": "Click 'File'.",
"actions": [
{
"type": "click",
"target": "file_menu",
"bbox": [
0.14,
2.4,
2.28,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_32.png",
"instruction": "Select 'Quit'.",
"actions": [
{
"type": "click",
"target": "quit_option",
"bbox": [
0.43,
34.02,
19.52,
2.64
]
}
]
}
]
},
{
"task_overview": "Zoom to fit all views.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_33.png",
"instruction": "Click 'Edit'.",
"actions": [
{
"type": "click",
"target": "edit_menu",
"bbox": [
2.56,
2.39,
2.42,
2.87
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_34.png",
"instruction": "Hover 'Views'.",
"actions": [
{
"type": "hover",
"target": "views_menu",
"bbox": [
2.71,
19.14,
24.09,
2.87
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_35.png",
"instruction": "Click 'Zoom to Fit in All Views'.",
"actions": [
{
"type": "click",
"target": "zoom_fit",
"bbox": [
27.35,
19.42,
16.67,
2.64
]
}
]
}
]
},
{
"task_overview": "Select a specific segmentation label.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_36.png",
"instruction": "Locate 'Segmentation Labels' panel.",
"actions": [
{
"type": "hover",
"target": "labels_list",
"bbox": [
4.99,
2.64,
5.98,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_37.png",
"instruction": "Click 'Label 2' to select.",
"actions": [
{
"type": "click",
"target": "label_2",
"bbox": [
0.85,
71.6,
9.26,
2.63
]
}
]
}
]
},
{
"task_overview": "Open Label Editor.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_38.png",
"instruction": "Click 'Segmentation'.",
"actions": [
{
"type": "click",
"target": "seg_menu",
"bbox": [
4.84,
2.39,
6.13,
2.87
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_39.png",
"instruction": "Select 'Label Editor...'.",
"actions": [
{
"type": "click",
"target": "editor_option",
"bbox": [
4.99,
25.37,
21.65,
2.87
]
}
]
}
]
},
{
"task_overview": "Interpolate labels between slices.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_40.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
16.24,
2.64,
2.71,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_41.png",
"instruction": "Select 'Interpolate Labels...'.",
"actions": [
{
"type": "click",
"target": "interpolate_option",
"bbox": [
16.24,
33.54,
21.79,
2.64
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_42.png",
"instruction": "Click 'Interpolate' button.",
"actions": [
{
"type": "click",
"target": "interpolate_btn",
"bbox": [
38.63,
80.29,
21.24,
2.88
]
}
]
}
]
},
{
"task_overview": "Access Application Preferences.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_43.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
16.1,
2.39,
2.85,
2.87
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_44.png",
"instruction": "Select 'Preferences...'.",
"actions": [
{
"type": "click",
"target": "pref_option",
"bbox": [
16.24,
39.53,
21.65,
2.4
]
}
]
}
]
},
{
"task_overview": "Access Distributed Segmentation Service.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_45.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.95,
2.64,
2.99,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_46.png",
"instruction": "Select 'Distributed Segmentation Service...'.",
"actions": [
{
"type": "click",
"target": "dss_option",
"bbox": [
16.38,
30.91,
21.37,
2.16
]
}
]
}
]
},
{
"task_overview": "Initiate Free Rotation.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_47.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.81,
2.39,
2.99,
2.87
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_48.png",
"instruction": "Select 'Image Free Rotation...'.",
"actions": [
{
"type": "click",
"target": "rotation_option",
"bbox": [
16.24,
24.89,
21.65,
3.11
]
}
]
}
]
},
{
"task_overview": "Reorient the image.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_49.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.95,
2.64,
2.99,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_50.png",
"instruction": "Select 'Reorient Image...'.",
"actions": [
{
"type": "click",
"target": "reorient_option",
"bbox": [
16.24,
22.28,
21.51,
2.4
]
}
]
}
]
},
{
"task_overview": "Auto-adjust contrast via Image Information.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_51.png",
"instruction": "Click 'Tools'.",
"actions": [
{
"type": "click",
"target": "tools_menu",
"bbox": [
15.96,
2.64,
2.99,
2.64
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_52.png",
"instruction": "Select 'Image Information'.",
"actions": [
{
"type": "click",
"target": "info_option",
"bbox": [
16.24,
13.64,
21.52,
2.39
]
}
]
},
{
"step_id": 3,
"image_path": "Images/ITKsnap/MI_53.png",
"instruction": "Click 'Contrast' tab.",
"actions": [
{
"type": "click",
"target": "contrast_tab",
"bbox": [
45.6,
21.53,
4.42,
2.63
]
}
]
},
{
"step_id": 4,
"image_path": "Images/ITKsnap/MI_54.png",
"instruction": "Click 'Auto'.",
"actions": [
{
"type": "click",
"target": "auto_btn",
"bbox": [
64.82,
32.85,
3.42,
2.64
]
}
]
}
]
},
{
"task_overview": "Export segmentation as Surface Mesh.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_55.png",
"instruction": "Click 'Segmentation' menu.",
"actions": [
{
"type": "click",
"target": "seg_menu",
"bbox": [
4.99,
2.64,
5.98,
2.4
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_56.png",
"instruction": "Select 'Export as Surface Mesh...'.",
"actions": [
{
"type": "click",
"target": "mesh_option",
"bbox": [
4.99,
19.9,
21.51,
2.4
]
}
]
}
]
},
{
"task_overview": "Calculate Volumes and Statistics.",
"steps": [
{
"step_id": 1,
"image_path": "Images/ITKsnap/MI_57.png",
"instruction": "Click on the 'Segmentation' menu.",
"actions": [
{
"type": "click",
"target": "segmentation_menu",
"bbox": [
4.99,
2.4,
5.84,
2.87
]
}
]
},
{
"step_id": 2,
"image_path": "Images/ITKsnap/MI_58.png",
"instruction": "Select 'Volumes and Statistics' from the list.",
"actions": [
{
"type": "click",
"target": "volumes_stats_option",
"bbox": [
4.84,
31.39,
21.65,
2.4
]
}
]
}
]
}
]
}