ArkaAcharya commited on
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Update dataset.py

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  1. dataset.py +61 -0
dataset.py CHANGED
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+ import json
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+ import os
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+ import datasets
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+
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+ # Define the dataset
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+ class M3Retrieve(datasets.GeneratorBasedBuilder):
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+ VERSION = datasets.Version("1.0.0")
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+
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+ def _info(self):
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+ return datasets.DatasetInfo(
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+ description="M3Retrieve: Benchmarking Multimodal Retrieval for Medicine",
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+ features={
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+ "queries": {
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+ "_id": datasets.Value("string"),
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+ "caption": datasets.Value("string"),
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+ "image_path": datasets.Value("string"),
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+ },
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+ "corpus": {
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+ "_id": datasets.Value("string"),
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+ "text": datasets.Value("string"),
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+ },
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+ "qrels": {
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+ "query-id": datasets.Value("string"),
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+ "corpus-id": datasets.Value("string"),
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+ "score": datasets.Value("float32"),
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+ },
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+ },
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+ supervised_keys=None,
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+ )
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+
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+ def _split_generators(self, dl_manager):
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+ """Returns SplitGenerators."""
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+ data_dir = dl_manager.download_and_extract(self.config.data_dir)
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+
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+ return [
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+ datasets.SplitGenerator(
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+ name="queries",
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+ gen_kwargs={"filepath": os.path.join(data_dir, "queries.jsonl"), "key": "queries"},
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+ ),
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+ datasets.SplitGenerator(
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+ name="corpus",
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+ gen_kwargs={"filepath": os.path.join(data_dir, "corpus.jsonl"), "key": "corpus"},
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+ ),
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+ datasets.SplitGenerator(
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+ name="qrels",
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+ gen_kwargs={"filepath": os.path.join(data_dir, "qrels/test.tsv"), "key": "qrels"},
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+ ),
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+ ]
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+
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+ def _generate_examples(self, filepath, key):
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+ """Yields examples as (key, example) tuples."""
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+ if key in ["queries", "corpus"]:
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+ with open(filepath, "r", encoding="utf-8") as f:
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+ for i, line in enumerate(f):
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+ data = json.loads(line)
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+ yield i, data
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+ elif key == "qrels":
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+ with open(filepath, "r", encoding="utf-8") as f:
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+ for i, line in enumerate(f):
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+ query_id, corpus_id, score = line.strip().split("\t")
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+ yield i, {"query-id": query_id, "corpus-id": corpus_id, "score": float(score)}