#!/usr/bin/env python3 """Example: how to format predictions for PROTAC-Bench evaluation. This script demonstrates the expected prediction format. Replace the random predictions with your model's output. Usage: python examples/example_submission.py python evaluation/evaluate.py --predictions example_predictions.csv --output my_results.json """ import json from pathlib import Path import numpy as np import pandas as pd DATA_DIR = Path(__file__).resolve().parent.parent / "data" def main(): # Load dataset df = pd.read_csv(DATA_DIR / "protac_bench.csv") print(f"Dataset: {len(df)} entries") # === Replace this with your model's predictions === np.random.seed(42) predicted_probs = np.random.rand(len(df)) # ================================================== # Format predictions: must have 'index' and 'predicted_probability' columns submission = pd.DataFrame({ "index": range(len(df)), "predicted_probability": predicted_probs, }) out_path = Path(__file__).resolve().parent.parent / "example_predictions.csv" submission.to_csv(out_path, index=False) print(f"Saved {len(submission)} predictions to {out_path}") print(f"\nTo evaluate, run:") print(f" python evaluation/evaluate.py --predictions {out_path.name} --output results.json") if __name__ == "__main__": main()