# Main panel summary

- Total probes emitted: **10000** (target 10000)
- Seed: 42
- Length range: 128-1024 bp

## Per-element breakdown

| element                 | group   |   target |   emitted |   datasets |
|:------------------------|:--------|---------:|----------:|-----------:|
| promoter                | Human   |     1400 |      1400 |          3 |
| enhancer                | Human   |     1400 |      1400 |          1 |
| splice_donor            | Human   |      600 |       600 |          1 |
| splice_acceptor         | Human   |      600 |       600 |          1 |
| chromatin_access        | Plant   |      450 |       450 |          7 |
| polyA                   | Plant   |      350 |       350 |          6 |
| lncRNA                  | Plant   |      300 |       300 |          6 |
| nascent_RNA             | Plant   |      200 |       200 |          1 |
| splicing_plant_donor    | Plant   |      150 |       150 |          1 |
| splicing_plant_acceptor | Plant   |      150 |       150 |          1 |
| yeast_genome            | Fungi   |     1200 |      1200 |         10 |
| fungi_genome            | Fungi   |     1500 |      1500 |          1 |
| virus_variants          | Virus   |      600 |       600 |          1 |
| virus_species           | Virus   |     1100 |      1100 |          1 |

## Length distribution

|   count |   mean |   std |   min |   25% |   50% |   75% |   max |
|--------:|-------:|------:|------:|------:|------:|------:|------:|
|   10000 |  610.1 | 334.9 |   156 |   300 |   500 |  1024 |  1024 |

## Species × functional element cross-tab

| functional_element      | species                   |    n |
|:------------------------|:--------------------------|-----:|
| chromatin_access        | Arabidopsis thaliana      |   64 |
| chromatin_access        | Brachypodium distachyon   |   64 |
| chromatin_access        | Oryza sativa MH63         |   64 |
| chromatin_access        | Oryza sativa ZS97         |   64 |
| chromatin_access        | Setaria italica           |   64 |
| chromatin_access        | Sorghum bicolor           |   65 |
| chromatin_access        | Zea mays                  |   65 |
| enhancer                | Homo sapiens              | 1400 |
| fungi_genome            | fungi_sp_0                |   75 |
| fungi_genome            | fungi_sp_1                |   75 |
| fungi_genome            | fungi_sp_10               |   75 |
| fungi_genome            | fungi_sp_11               |   75 |
| fungi_genome            | fungi_sp_12               |   75 |
| fungi_genome            | fungi_sp_13               |   75 |
| fungi_genome            | fungi_sp_14               |   75 |
| fungi_genome            | fungi_sp_15               |   75 |
| fungi_genome            | fungi_sp_16               |   75 |
| fungi_genome            | fungi_sp_17               |   75 |
| fungi_genome            | fungi_sp_18               |   75 |
| fungi_genome            | fungi_sp_19               |   75 |
| fungi_genome            | fungi_sp_2                |   75 |
| fungi_genome            | fungi_sp_3                |   75 |
| fungi_genome            | fungi_sp_4                |   75 |
| fungi_genome            | fungi_sp_5                |   75 |
| fungi_genome            | fungi_sp_6                |   75 |
| fungi_genome            | fungi_sp_7                |   75 |
| fungi_genome            | fungi_sp_8                |   75 |
| fungi_genome            | fungi_sp_9                |   75 |
| lncRNA                  | Glycine max               |   50 |
| lncRNA                  | Manihot esculenta         |   50 |
| lncRNA                  | Solanum lycopersicum      |   50 |
| lncRNA                  | Sorghum bicolor           |   50 |
| lncRNA                  | Triticum aestivum         |   50 |
| lncRNA                  | Zea mays                  |   50 |
| nascent_RNA             | Manihot esculenta         |  200 |
| polyA                   | Arabidopsis thaliana      |   58 |
| polyA                   | Chlamydomonas reinhardtii |   58 |
| polyA                   | Medicago truncatula       |   58 |
| polyA                   | Oryza sativa indica       |   58 |
| polyA                   | Oryza sativa japonica     |   59 |
| polyA                   | Trifolium pratense        |   59 |
| promoter                | Homo sapiens              | 1400 |
| splice_acceptor         | Homo sapiens              |  600 |
| splice_donor            | Homo sapiens              |  600 |
| splicing_plant_acceptor | Arabidopsis thaliana      |  150 |
| splicing_plant_donor    | Arabidopsis thaliana      |  150 |
| virus_species           | virus_sp_0                |   44 |
| virus_species           | virus_sp_1                |   44 |
| virus_species           | virus_sp_10               |   44 |
| virus_species           | virus_sp_11               |   44 |
| virus_species           | virus_sp_12               |   44 |
| virus_species           | virus_sp_13               |   44 |
| virus_species           | virus_sp_14               |   44 |
| virus_species           | virus_sp_15               |   44 |
| virus_species           | virus_sp_16               |   44 |
| virus_species           | virus_sp_17               |   44 |
| virus_species           | virus_sp_18               |   44 |
| virus_species           | virus_sp_19               |   44 |
| virus_species           | virus_sp_2                |   44 |
| virus_species           | virus_sp_20               |   44 |
| virus_species           | virus_sp_21               |   44 |
| virus_species           | virus_sp_22               |   44 |
| virus_species           | virus_sp_23               |   44 |
| virus_species           | virus_sp_24               |   44 |
| virus_species           | virus_sp_3                |   44 |
| virus_species           | virus_sp_4                |   44 |
| virus_species           | virus_sp_5                |   44 |
| virus_species           | virus_sp_6                |   44 |
| virus_species           | virus_sp_7                |   44 |
| virus_species           | virus_sp_8                |   44 |
| virus_species           | virus_sp_9                |   44 |
| virus_variants          | covid_var_0               |   67 |
| virus_variants          | covid_var_1               |   67 |
| virus_variants          | covid_var_2               |   66 |
| virus_variants          | covid_var_3               |   67 |
| virus_variants          | covid_var_4               |   66 |
| virus_variants          | covid_var_5               |   67 |
| virus_variants          | covid_var_6               |   66 |
| virus_variants          | covid_var_7               |   67 |
| virus_variants          | covid_var_8               |   67 |
| yeast_genome            | Saccharomyces cerevisiae  | 1200 |

## GC content by element

| functional_element      |   count |   mean |   min |   max |
|:------------------------|--------:|-------:|------:|------:|
| chromatin_access        |     450 |  0.49  | 0.239 | 0.75  |
| enhancer                |    1400 |  0.483 | 0.2   | 0.81  |
| fungi_genome            |    1500 |  0.462 | 0.033 | 0.665 |
| lncRNA                  |     300 |  0.458 | 0.218 | 0.763 |
| nascent_RNA             |     200 |  0.287 | 0.128 | 0.424 |
| polyA                   |     350 |  0.404 | 0.218 | 0.672 |
| promoter                |    1400 |  0.593 | 0.29  | 0.877 |
| splice_acceptor         |     600 |  0.487 | 0.252 | 0.838 |
| splice_donor            |     600 |  0.46  | 0.242 | 0.712 |
| splicing_plant_acceptor |     150 |  0.393 | 0.261 | 0.505 |
| splicing_plant_donor    |     150 |  0.389 | 0.236 | 0.513 |
| virus_species           |    1100 |  0.354 | 0.149 | 0.741 |
| virus_variants          |     600 |  0.381 | 0.322 | 0.484 |
| yeast_genome            |    1200 |  0.383 | 0.232 | 0.552 |