"""Verify and extract an individual FlyControl figure archive.""" import argparse, hashlib, json, tarfile from pathlib import Path def sha(path): h=hashlib.sha256() with Path(path).open('rb') as f: for block in iter(lambda:f.read(8*1024*1024),b''):h.update(block) return h.hexdigest() def extract(figure, root, output): root,output=Path(root).resolve(),Path(output).resolve() index=json.loads((root/'archive_index.json').read_text())['archives'] item=next(x for x in index if x['paper_item']==figure) archive=root/item['path'] assert archive.stat().st_size==item['bytes'] and sha(archive)==item['sha256'], 'Archive integrity failure' manifest={x['path']:x for x in map(json.loads,(root/'manifests'/f'{figure}.jsonl').open())} assert len(manifest)==item['members'] output.mkdir(parents=True,exist_ok=True) seen=set() with tarfile.open(archive,'r|gz') as tar: for member in tar: if not member.isfile() or member.name not in manifest or member.name in seen: raise ValueError('Unexpected archive member: '+member.name) dest=(output/member.name).resolve() if not dest.is_relative_to(output):raise ValueError('Unsafe member path') expected=manifest[member.name] assert member.size==expected['bytes'] dest.parent.mkdir(parents=True,exist_ok=True) if dest.exists(): assert dest.stat().st_size==expected['bytes'] and sha(dest)==expected['sha256'], str(dest) else: stream=tar.extractfile(member) hasher=hashlib.sha256() try: with dest.open('xb') as f: for block in iter(lambda:stream.read(8*1024*1024),b''): f.write(block);hasher.update(block) assert hasher.hexdigest()==expected['sha256'], str(dest) except BaseException: dest.unlink(missing_ok=True) raise seen.add(member.name) assert seen==set(manifest) print(json.dumps(dict(figure=figure,members=len(seen),verified=True,output=str(output)))) if __name__=='__main__': p=argparse.ArgumentParser(description=__doc__) p.add_argument('--figure',required=True) p.add_argument('--dataset-dir',default=str(Path(__file__).parent)) p.add_argument('--output',required=True) a=p.parse_args();extract(a.figure,a.dataset_dir,a.output)