Initial version
Browse files- lt_hpo.jsonld +64 -0
- lt_hpo.md +84 -0
- lt_hpo.obo +0 -0
lt_hpo.jsonld
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{
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"@context": "https://semiceu.github.io/MLDCAT-AP/releases/3.0.0/context/mldcat-ap.jsonld",
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"@type": "dcat:Dataset",
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"@id": "https://vssa.lrv.lt/dataset/LT_HPO",
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"dct:identifier": "LT_HPO",
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"dct:title": {
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"@value": "Žmogaus fenotipo ontologija lietuvių kalba",
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"@language": "lt"
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},
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"dct:description": {
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"@value": "Žmogaus fenotipo ontologija lietuvių kalba",
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"@language": "lt"
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},
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"it6:collectionDate": "2026-04-01",
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"dct:publisher": {
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"@type": "foaf:Agent",
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"foaf:name": "VSSA"
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},
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"dct:creator": {
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"@type": "foaf:Agent",
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"foaf:name": "MB TETRAGRAMA"
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},
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"dct:rightsHolder": {
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"@type": "foaf:Agent",
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"foaf:name": "VSSA"
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},
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"dct:license": {
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"@id": "https://creativecommons.org/publicdomain/zero/1.0/"
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},
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"dct:accessRights": {
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"@id": "http://publications.europa.eu/resource/authority/access-right/PUBLIC"
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},
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"dct:language": [
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{
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"@value": "lt"
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}
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],
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"it6:version": "1.0",
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"dcat:landingPage": {
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"@id": "https://vssa.lrv.lt/lt/apie-vssa/projektai/zmogaus-fenotipo-ontologijos-lietuviu-kalba-sukurimas/"
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},
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"dcat:distribution": [
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{
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"@type": "dcat:Distribution",
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"@id": "https://vssa.lrv.lt/distribution/lt_hpo",
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"dct:title": {
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"@value": "Pagrindinė distribucija",
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"@language": "lt"
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},
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"dcat:accessURL": {
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"@id": "https://clarin-repo.lt/items/767aadb9-0f91-412b-959a-bba8497777ba"
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},
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"dcat:mediaType": {
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"@value": "application/zip"
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}
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}
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],
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"adms:note": [
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{
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"@value": "Remiantis tarptautinėmis rekomendacijomis bei standartais (https://hpo.jax.org/app/) - sukurtas lietuvių kalbos išteklius – žmogaus fenotipo ontologija lietuvių kalba, kurioje yra susisteminti žmogaus fenotipų pokyčių įvairovę apibūdinantys terminai ir sąvokos.",
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"@language": "lt"
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}
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]
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}
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lt_hpo.md
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# LT_HPO: Lithuanian Human Phenotype Ontology
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## Overview
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LT_HPO is a localized Lithuanian version of the Human Phenotype Ontology
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(HPO), designed to provide standardized terminology for describing human
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phenotypic abnormalities in Lithuanian clinical and research contexts.
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The ontology preserves full structural compatibility with the original
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HPO, including identifiers, hierarchy, and logical relationships.
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Localization is limited to annotation-level modifications, such as
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translated labels, definitions, and comments.
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## Purpose
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LT_HPO enables:
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- Consistent documentation of phenotypic features in Lithuanian
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- Integration with international biomedical resources (e.g., OMIM,
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Orphanet, UMLS)
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- Use in clinical decision support, research, and data exchange
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- Semantic interoperability with the global HPO ecosystem
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## Data Model
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The ontology is represented in OBO format and structured as a directed
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acyclic graph (DAG), where each term may have one or more parent terms
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(is_a relationships).
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Each entry is defined as a \[Term\] block with the following fields:
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### Core Fields
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- id\
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Unique identifier (e.g., HP:0000001) preserved from original HPO
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- name\
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Lithuanian term label
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- def\
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Lithuanian definition (if available)
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### Structural Fields
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- is_a\
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Indicates hierarchical relationship to a more general parent term
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-
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### Cross-references
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- xref\
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Links to external biomedical databases and terminologies, such as
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UMLS, OMIM, Orphanet, SNOMED CT, NCIt, and MEDDRA
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### Metadata
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- comment\
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Additional explanatory information in Lithuanian
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- property_value\
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Structured metadata (e.g., terms:date -- translation or update
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timestamp)
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## Usage
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LT_HPO can be used to annotate patient phenotypes, perform
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phenotype-driven analysis, map clinical findings to genetic diseases,
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and enable multilingual interoperability in biomedical systems.
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## Compatibility
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- Fully compatible with original HPO identifiers and structure
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- No modifications to ontology logic or relationships
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- Extensions are limited to Lithuanian annotations and metadata
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## License and Attribution
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LT_HPO is based on the Human Phenotype Ontology (HPO). Users must comply
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with HPO licensing requirements, including proper attribution and
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preservation of ontology structure.
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Lithuanian translations and additional metadata are provided under CC0
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where applicable.
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lt_hpo.obo
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