import pytest from pathlib import Path import pandas as pd import numpy as np from model.experiments import Plan, load_plan, \ CreateSpecs, RunModels, AnalyzeModels def load_plan_str(tmpdir, plan_str): path = tmpdir/'plan.py' with path.open('w') as plan_file: plan_file.write(plan_str) return load_plan(path) def test_load_plan_name(tmpdir): plan = load_plan_str(tmpdir, 'Plan(name="testing")') assert plan.name == 'testing' def test_load_plan_globals(tmpdir): assert load_plan_str(tmpdir, 'np; pd; Plan()') def test_load_plan_with_create_specs(tmpdir): plan = load_plan_str(tmpdir, """ Plan(steps=[CreateSpecs(a=1, b=np.arange(0, 1), c=[3, 4])]) """.strip()) create = plan.steps[0] assert create.params['a'] == 1 assert all(create.params['b'] == np.arange(0, 1)) assert create.params['c'] == [3, 4] def test_load_plan_with_run_models(tmpdir): plan = load_plan_str(tmpdir, """ Plan(steps=[RunModels(runs_per_spec=9)]) """.strip()) run = plan.steps[0] assert run.runs_per_spec == 9 def test_load_plan_with_analyze_models(tmpdir): plan = load_plan_str(tmpdir, """ Plan(steps=[AnalyzeModels(fields=['a', 'b', 'c'])]) """.strip()) analyze = plan.steps[0] assert analyze.fields == ['a', 'b', 'c'] def test_new_plan(): steps = [CreateSpecs(), RunModels()] plan = Plan(name='my_experiment', steps=steps) assert plan.name == 'my_experiment' assert plan.steps == steps def test_experiment_file(): exp = Plan('some-exp') root = Path('root') assert exp.experiment_file(root) == root/'some-exp.hdf5' def test_create_specs_expanded_specs(): expanded = CreateSpecs( a=1, b=[3, 4, 5], c=[6, 7], ).expanded_specs keys = 'a', 'b', 'c' as_tuples = { tuple(value[key] for key in keys) for _, value in expanded.iterrows() } assert as_tuples == { (1, 3, 6), (1, 3, 7), (1, 4, 6), (1, 4, 7), (1, 5, 6), (1, 5, 7), } @pytest.fixture def store(tmpdir): return pd.HDFStore(str(tmpdir/'test-store.hdf5')) def test_run_create_specs(store): step = CreateSpecs(a=1, b=np.arange(10)) assert not step.complete(store) step.run(store) assert step.complete(store) assert all(store['specs']['a'] == np.ones(10)) assert all(store['specs']['b'] == np.arange(10))