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Redistribute BTXRD (CC BY 4.0, figshare 27865398) in the fxr-dataset format

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  1. BTXRD/LICENSE +5 -0
  2. BTXRD/README.md +31 -0
  3. BTXRD/dataset.yml +0 -0
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BTXRD/LICENSE ADDED
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+ CC BY 4.0
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+ https://creativecommons.org/licenses/by/4.0/
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+
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+ Derived from: https://doi.org/10.6084/m9.figshare.27865398
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+ Attribution: Yao, S., Huang, Y., Wang, X. et al. A radiograph dataset for the classification, localization, and segmentation of primary bone tumors. Sci. Data 12, 88 (2025). doi:10.1038/s41597-024-04311-y. Dataset: figshare, doi:10.6084/m9.figshare.27865398 (CC BY 4.0).
BTXRD/README.md ADDED
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+ # BTXRD (musculoskeletal radiographs with primary bone tumor masks)
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+
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+ Part of the FleXray data release. Repackaged from the original distribution at
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+ https://doi.org/10.6084/m9.figshare.27865398 under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/).
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+
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+ **Citation:** Yao, S., Huang, Y., Wang, X. et al. A radiograph dataset for the classification, localization, and segmentation of primary bone tumors. Sci. Data 12, 88 (2025). doi:10.1038/s41597-024-04311-y. Dataset: figshare, doi:10.6084/m9.figshare.27865398 (CC BY 4.0).
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+
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+ ## Contents
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+
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+ - 1867 samples (test: 281, train: 1305, val: 281); one image and one label per sample.
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+ - `images/*.png`: 16-bit grayscale PNG, intensities in [0, 65535] map linearly to [0, 1].
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+ - `labels/`: dense index map (PNG). Label ids/channels:
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+ - `0`: background
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+ - `1`: tumor
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+ - `dataset.yml`: `fxr-dataset` manifest (schema version 1). Splits are the
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+ ones used in the FleXray paper; `metadata.original_shape` is the source image shape.
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+
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+ ## Preprocessing
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+
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+ Every image was min-max normalized to [0, 1] per image, padded to a square with zeros
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+ (centered) and resized to 256 x 256 (area interpolation for images, nearest for labels). Labels were remapped from the
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+ source annotation to the dataset-native names listed above; the FleXray package maps
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+ those names into its label protocol at training time.
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+
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+ ## Usage
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+
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+ ```bash
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+ pip install flexray
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+ fxr-dataset validate dataset.yml
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+ fxr-dataset pack dataset.yml /data/flexray/BTXRD
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+ ```
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