Datasets:
Redistribute BTXRD (CC BY 4.0, figshare 27865398) in the fxr-dataset format
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- BTXRD/LICENSE +5 -0
- BTXRD/README.md +31 -0
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BTXRD/LICENSE
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CC BY 4.0
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https://creativecommons.org/licenses/by/4.0/
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Derived from: https://doi.org/10.6084/m9.figshare.27865398
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Attribution: Yao, S., Huang, Y., Wang, X. et al. A radiograph dataset for the classification, localization, and segmentation of primary bone tumors. Sci. Data 12, 88 (2025). doi:10.1038/s41597-024-04311-y. Dataset: figshare, doi:10.6084/m9.figshare.27865398 (CC BY 4.0).
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# BTXRD (musculoskeletal radiographs with primary bone tumor masks)
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Part of the FleXray data release. Repackaged from the original distribution at
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https://doi.org/10.6084/m9.figshare.27865398 under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/).
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**Citation:** Yao, S., Huang, Y., Wang, X. et al. A radiograph dataset for the classification, localization, and segmentation of primary bone tumors. Sci. Data 12, 88 (2025). doi:10.1038/s41597-024-04311-y. Dataset: figshare, doi:10.6084/m9.figshare.27865398 (CC BY 4.0).
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## Contents
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- 1867 samples (test: 281, train: 1305, val: 281); one image and one label per sample.
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- `images/*.png`: 16-bit grayscale PNG, intensities in [0, 65535] map linearly to [0, 1].
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- `labels/`: dense index map (PNG). Label ids/channels:
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- `0`: background
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- `1`: tumor
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- `dataset.yml`: `fxr-dataset` manifest (schema version 1). Splits are the
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ones used in the FleXray paper; `metadata.original_shape` is the source image shape.
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## Preprocessing
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Every image was min-max normalized to [0, 1] per image, padded to a square with zeros
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(centered) and resized to 256 x 256 (area interpolation for images, nearest for labels). Labels were remapped from the
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source annotation to the dataset-native names listed above; the FleXray package maps
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those names into its label protocol at training time.
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## Usage
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```bash
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pip install flexray
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fxr-dataset validate dataset.yml
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fxr-dataset pack dataset.yml /data/flexray/BTXRD
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```
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