| The Julia Express |
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| Bogumił Kami ´nski |
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| December 31, 2022 |
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| Contents |
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| 1 Introduction |
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| 2 Getting around |
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| 3 Basic literals and types |
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| 4 Special literals and types |
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| 4.1 Tuples and NamedTuples . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
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| 4.2 Arrays . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
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| 4.3 Composite types |
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| . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
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| 4.4 Dictionaries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
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| 5 Strings |
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| 6 Programming constructs |
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| 7 Variable scoping |
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| 8 Modules |
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| 9 Operators |
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| 10 Essential general usage functions |
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| 11 Reading and writing data |
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| 12 Random numbers |
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| 13 Statistics and machine learning |
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| 14 Macros |
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| 15 Plotting |
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| 16 Working with tabular data |
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| 17 The Joy of Julia |
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| The Julia Express |
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| 1 Introduction |
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| 2 |
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| The purpose of this document is to introduce programmers to the Julia programming by example. This is a simplified |
| exposition of the language.1 |
| It is simplest to execute these examples by copy-pasting to the Julia REPL (https://docs.julialang.org/en/latest/ |
| stdlib/REPL/) or copying them to a file and next running them using include function. The difference is that copy- |
| paste approach will echo output of each instruction to the terminal. |
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| If some package is missing on your system switch to the package manager mode by pressing ] in the Julia REPL, and |
| then write add [package name] to require installing it. |
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| Over the years of using Julia I have learned that for each project you have it is best to have a separate project environ- |
| ment that keeps track of its dependencies. You can check out this blog post https://bkamins.github.io/julialang/ |
| 2020/05/18/project-workflow.html to read more about it. |
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| This is an introductory document. Important topics that a person learning the Julia should be aware of, that are not |
| covered are: |
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| 1) parametric types; |
| 2) parallel and distributed processing; |
| 3) advanced I/O operations; |
| 4) advanced package management; |
| 5) interaction with system shell; see run; |
| 6) exception handling; see try; |
| 7) creation of coroutines; |
| 8) integration with C, Fortran, Python and R. |
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| You can read about them in the latest Julia documentation at http://julia.readthedocs.org/en/latest/manual/. |
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| The Julia Express was tested using the following 64-bit Julia version (you can check your version by calling running |
| versioninfo() in your Julia session): |
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| Julia Version 1.8.4 |
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| Commit 00177ebc4f (2022-12-23 21:32 UTC) |
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| Platform Info: |
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| OS: Windows (x86_64-w64-mingw32) |
| CPU: 12 x Intel(R) Core(TM) i7-10850H CPU @ 2.70GHz |
| WORD_SIZE: 64 |
| LIBM: libopenlibm |
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| LLVM: libLLVM-13.0.1 (ORCJIT, skylake) |
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| Threads: 1 on 12 virtual cores |
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| If you prefer to read this document in a different format than PDF then the simplest approach to do it is to clone the |
| project repository https://github.com/bkamins/The-Julia-Express to your local folder and use Pandoc to perform an |
| appropriate conversion. For instance running the command |
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| pandoc -i julia_express.tex -f latex -t html5 -s -o julia_express.html |
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| will produce you a HTML output. |
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| All suggestions how this guide can be improved are welcomed. Please contact me at bkamins@sgh.waw.pl. |
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| 2 Getting around |
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| Running julia invokes an interactive (REPL) mode. In this mode some useful commands are: |
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| 1) ^D (exits Julia); |
| 2) ^C (interrupts computations); |
| 3) ? (enters help mode); |
| 4) ; (enters system shell mode); |
| 5) ] (enters package manager mode); |
| 6) Ctrl-l clears screen; |
| 7) putting ; after the expression will disable showing its value in REPL (not needed in scripts). |
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| Examples of some essential functions in the Julia REPL (they can be also invoked in scripts): |
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| @edit max(1,2) |
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| # show the definition of max function when invoked with arguments 1 and 2 |
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| varinfo() |
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| # list of global variables and their types |
|
|
| 1The rocket ship clip is free for download at http://www.clipartlord.com/free-cartoon-rocketship-clip-art-2/. |
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| The Julia Express |
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| 3 |
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| cd("D:/") |
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| pwd() |
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| # change working directory to D:/ (on Windows you can use /) |
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| # get current working directory |
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| include("file.jl") # execute source file |
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| exit(1) |
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| # exit Julia with code 1 (exit code 0 is used by default) |
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| clipboard([1,2]) |
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| # copy data to system clipboard |
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| clipboard() |
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| # load data from system clipboard as a string |
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| You can execute a Julia script from OS shell by running julia script.jl. |
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| Try saving the following example script to a file and run it (more examples of all the constructs used are given in |
| following sections): |
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| """Sieve of Eratosthenes function docstring""" |
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| function es(n::Int) # accepts one integer argument |
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| isprime = trues(n) # n-element vector of true-s |
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| isprime[1] = false # 1 is not a prime |
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| for i in 2:isqrt(n) # loop integers less or equal than sqrt(n) |
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| if isprime[i] # conditional evaluation |
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| for j in i^2:i:n # sequence with step i |
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| isprime[j] = false |
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| end |
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| end |
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| end |
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| return filter(x -> isprime[x], 1:n) # filter using an anonymous function |
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| end |
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| println(es(100)) |
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| # print all primes less or equal than 100 |
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| @time length(es(10^6)) |
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| # check function execution time and memory usage |
|
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| 3 Basic literals and types |
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| Basic scalar literals are the following: |
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| 1::Int |
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| # 64 bit integer on 64 bit Julia, no overflow warnings |
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| 1.0::Float64 # 64 bit float, defines NaN, -Inf, Inf |
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| true::Bool |
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| # boolean, allows "true" and "false" |
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| 'c'::Char |
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| # character, allows Unicode |
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| "s"::String # strings, allows Unicode, see also Strings below |
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| The syntax x::Type is a literal x with type Type assertion. In practice the type assertion is not needed. Here we use it |
| only to show the type of each kind of a literal. All basic types listed above are immutable. |
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| Type assertions for variables are made in the same way and they can be useful to catch bugs in your code. |
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| An important feature of integers in Julia is that by default they are 64 bit on 64 bit Julia and 32 bit on 32 bit Julia. This |
| means that 1::Int32 assertion will fail on 64-bit Julia. |
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| Notably Int is a constant whose value is either Int64 or Int32 depending on version (the same with unsigned integer |
| UInt). |
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| There is no automatic type conversion, unless some function explicitly performs it. This is especially important in |
| function calls. The simplest, and preferred, way to perform the construction of a value x to type T by writing T(x), for |
| example: |
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| Int64('a') |
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| # character to integer |
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| Int64(2.0) |
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| # float to integer |
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| Int64(1.3) |
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| # inexact error |
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| Int64("a") |
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| # error no conversion possible |
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| Float64(1) |
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| # integer to float |
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| Bool(1) |
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| Bool(0) |
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| Bool(2) |
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| # constructs to boolean true |
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| # constructs to boolean false |
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| # construction error |
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| Char(89) |
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| # integer to char |
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| string(true) |
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| # cast Bool to string (works with other types, note small caps) |
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| string(1, true) # string can take more than one argument and concatenate them |
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| zero(10.0) |
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| # zero of type of 10.0 |
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| The Julia Express |
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| 4 |
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| Number |
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| Complex{T<:Real} |
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| Real |
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| Irrational{sym} |
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| Rational{T<:Integer} |
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| Integer |
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| AbstractFloat |
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| Float16 |
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| Float32 |
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| Float64 |
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| Bool |
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| Signed |
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| Unsigned |
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| BigFloat |
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| BigInt |
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| Int8 |
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| Int16 |
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| Int32 |
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| Int64 |
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| UInt8 |
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| UInt16 |
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| UInt32 |
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| UInt64 |
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| Int128 |
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| UInt128 |
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| Figure 1: Hierarchy of numeric types |
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| one(Int64) |
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| # one of type Int64 |
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| Conversion can be done using convert(Type, x) (typically convert will not perform a copy if x already has type Type; |
| for this reason it is typically preferable to perform construction, as it was explained above, rather than conversion): |
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| convert(Int64, 1.0) # convert float to integer |
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| Julia is throwing an inexact conversion error, if it cannot perform it exactly. |
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| convert(Int64, 1.3) # convert float to integer -> throws inexact conversion error |
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| Use floor(Int64, 1.3), ceil(Int64, 1.3) or round(Int64, 1.3) to perform rounding. |
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| Parsing strings can be done using parse(Type, str): |
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| parse(Int64, "1") # parse "1" string as Int64 |
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| Automatic promotion of many arguments to common type (if any exists) can be achieved using promote (typically you |
| will not need to perform such promotion yourself): |
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| promote(true, BigInt(1) // 3, 1.0) # tuple (see Tuples) of BigFloats, true promoted to 1.0 |
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| promote("a", 1) |
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| # error, promotion to a common type is not possible |
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| Many operations (arithmetic, assignment) are defined in a way that performs automatic type promotion (so this is a |
| way to work around no automatic type conversion rule in Julia). |
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| One can verify type of a value in the following way: |
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| typeof("abc") |
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| # String returned which is a AbstractString subtype |
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| isa("abc", AbstractString) # true |
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| isa(1, Float64) |
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| # false, integer is not a float |
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| isa(1.0, Float64) |
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| # true |
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| 1.0 isa Number |
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| # an alternative syntax; true, Number is abstract type |
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| supertype(Int64) |
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| # supertype of Int64 |
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| subtypes(Real) |
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| Int <: Real |
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| # subtypes of abstract type Real |
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| # true, <: checks if type is subtype of other type |
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| It is possible to perform calculations using arbitrary precision arithmetic, complex and rational numbers: |
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| BigInt(10) ^ 1000 |
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| # big integer |
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| BigFloat(10) ^ 1000 # big float, see documentation how to change default precision |
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| big(1.5) |
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| 1 + 1im |
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| # value of big type chosen appropriately, in this case BigFloat |
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| # a complex number |
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| 123 // 456 |
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| # rational numbers are created using // operator |
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| Type hierarchy of all standard numeric types is given in Figure 1. |
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| An important feature is that Bool is considered to be Integer. This is useful for performing arithmetic operations, but |
| sometimes can be surprising. |
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|
| The Julia Express |
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| 5 |
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| 4 Special literals and types |
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| Any |
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| # all objects are of this type |
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| Union{} # subtype of all types, no object can have this type |
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| Nothing # type indicating nothing (absence of a value), a subtype of Any |
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| nothing # only instance of Nothing |
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| Missing # type indicating missing value (a value exists but is unknown), a subtype of Any |
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| missing # only instance of Missing |
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| Additionally #undef indicates an incompletely initialized object element (see documentation for details). |
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| 4.1 Tuples and NamedTuples |
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| Tuples are immutable sequences indexed from 1: |
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| () |
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| (1,) |
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| # an empty tuple |
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| # a one element tuple |
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| ("a", 1) |
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| # a two element tuple |
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| ('a', false)::Tuple{Char, Bool} # tuple type assertion |
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| x = (1, 2, 3) |
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| x[1] |
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| x[1:2] |
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| x[4] |
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| x[1] = 1 |
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| a, b = x |
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| # 1 (element) |
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| # (1, 2) (tuple) |
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| # bounds error |
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| # error - a tuple is not mutable |
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| # tuple unpacking a == 1, b == 2 |
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| Additionally you can add names to tuple entries (via named tuples): |
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| NamedTuple() # an empty named tuple |
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| (a=1,) |
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| # a one element named tuple |
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| (x="a", y=1) # a two element named tuple |
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| x = (p=1, q=2, r=3) |
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| x.p |
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| # access to element p of a tuple |
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| typeof(x) |
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| # NamedTuple{(:p, :q, :r),Tuple{Int64,Int64,Int64}}, field names are part of type |
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| a, b, c = x |
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| # NamedTuple also supports unpacking; here we define a, b, and c variables |
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| (; a, b, c) |
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| # a convenience syntax to create a named tuple with a, b, c fields from variables |
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| NamedTuple can be thought of as an anonymous struct — see composite types below (so they behave in a different way |
| than tuples when testing for subtyping). This is an advanced topic that we do not cover in this introduction, see the |
| Julia manual for the details https://docs.julialang.org/en/latest/manual/types/). |
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| 4.2 Arrays |
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| Arrays are mutable and passed by reference. |
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| Useful array creation functions are the following: |
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| Array{Char}(undef, 2, 3, 4) # uninitialized 2x3x4 array of Chars |
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| Array{Int64}(undef, 0, 0) |
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| # degenerate 0x0 array of Int64 |
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| zeros(5) |
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| ones(5) |
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| # vector of Float64 zeros |
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| # vector of Float64 ones |
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| ones(Int64, 2, 1) |
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| # 2x1 array of Int64 ones |
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| trues(3), falses(3) # a tuple of a vector of trues and a vector of falses |
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| Matrix(I, 3, 3) |
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| # 3x3 Bool identity matrix, requires to run first: using LinearAlgebra |
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| x = range(0, stop=1, length=11) # an iterator having 11 equally spaced elements |
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| collect(x) |
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| # converts an iterator to vector |
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| 1:10 |
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| 1:2:10 |
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| # iterable from 1 to 10 |
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| # iterable from 1 to 9 with 2 skip |
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| reshape(1:12, 3, 4) # a 3x4 matrix like object filled columnwise with values from 1 to 12 |
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| fill("a", 2, 2) |
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| # a 2x2 array filled with "a" |
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| repeat(rand(2,2), 3, 2) # a 2x2 random matrix repeated 3x2 times |
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| x = [1, 2] |
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| # a two element vector |
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| resize!(x, 5) |
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| # resize x in place to hold 5 values (filled with garbage) |
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| The Julia Express |
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| 6 |
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| [1] |
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| [1;;] |
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| # a vector with one element (not a scalar) |
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| # a matrix with one element (not a scalar) |
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| [x * y for x in 1:2, y in 1:3] # a comprehension generating 2x3 array |
| Float64[x^2 for x in 1:4] # casting comprehension result element type to Float64 |
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| [1 2] |
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| [1 2]' |
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| # 1x2 matrix (hcat function) |
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| # 2x1 Adjoint matrix (reuses memory) |
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| permutedims([1 2]) |
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| # 2x1 matrix (permuted dimensions, new memory) |
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| [1, 2] |
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| [1; 2] |
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| # vector (concatenation) |
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| # vector (vcat function) |
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| [1 2 3; 1 2 3] |
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| # 2x3 matrix (hvcat function) |
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| [1; 2] == [1 2]' |
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| # false, different array dimensions |
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| hcat(1:2)==[1 2]' |
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| # true, dimensions match |
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| [(1, 2)] |
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| # 1-element vector |
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| collect((1, 2)) |
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| # 2-element vector by tuple unpacking |
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| [[1 2] 3] |
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| [[1; 2]; 3] |
|
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| # concatenate along rows (hcat) |
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| # concatenate along columns (vcat) |
|
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| tuple([1,2,3]) |
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| # a 1-element tuple containing a vector |
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| Tuple([1,2,3]) |
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| # a 3-element tuple unpacking a vector |
|
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| Vectors (1D arrays) are treated as column vectors. |
|
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| Most of the functionality for working with matrices are in LinearAlgebra module. Additionally Julia offers sparse and |
| distributed matrices (see the documentation for details). |
|
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| Commonly needed array utility functions: |
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| a = [x * y for x in 1:2, y in 1, z in 1:3] # 2x3 array of Int64; a singleton dimension is dropped |
| a = [x * y for x in 1:2, y in 1:1, z in 1:3] # 2x1x3 array of Int64; a singleton dimension is not dropped |
| ndims(a) |
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| # number of dimensions in a |
|
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| eltype(a) |
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| length(a) |
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| size(a) |
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| axes(a) |
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| # type of elements in a |
|
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| # number of elements in a |
|
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| # a tuple containing dimension sizes of a |
|
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| # a tuple of ranges specifying array axes |
|
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| eachindex(a) |
|
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| # each index to an array a |
|
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| CartesianIndices(a) # a lazy iterator over Cartesian indices into a |
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| LinearIndices(a) |
|
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| # a lazy iterator over linear indices into a |
|
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| vec(a) |
|
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| # cast an array to vector (single dimension); reuses memory |
|
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| dropdims(a, dims=2) # remove the 2nd dimension as it has length 1 |
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| sum(a, dims=3) |
|
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| # calculate sums for 3rd dimensions, similarly: mean, std, |
|
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| # prod, minimum, maximum, any, all; |
|
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| # using Statistics is required for statistical functions |
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| count(>(0), a) |
|
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| # count number of times a predicate is true, similar: all, any |
|
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| # note that we create an anonymous function with >(0) here |
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| Access functions: |
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| a = 0:0.01:1 |
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| # range with step 0.01 |
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| a[1] |
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| a[begin] |
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| a[end] |
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| # get scalar 0.0 |
|
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| # get scalar 0.0 (first position) |
|
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| # get scalar 1.0 (last position) |
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| a[begin:2:end] |
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| # every second element from range |
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| view(a, 1:2:101) |
|
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| # a view into a (a subarray of a) |
|
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| a[[1, 3, 6]] |
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| lastindex(a) |
|
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| # 1st, 3rd and 6th element of a, Array{Float64,1} |
|
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| # last index of the collection a; similarly firstindex |
|
|
| Observe the treatment of singleton dimensions: |
|
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| a = reshape(1:12, 3, 4) |
|
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| a[:, 1:2] |
|
|
| # 3x2 matrix |
|
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| a[:, 1] |
|
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| a[1, :] |
|
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| # 3 element vector |
|
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| # 4 element vector |
|
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| a[1:1, :] |
|
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| # 1x4 matrix |
|
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| a[:, :, 1, 1] |
|
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| # works 3x4 matrix |
|
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| a[:, :, :, [true]] # works 3x4x1x1 matrix |
|
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| a[1, 1, [false]] |
|
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| # works 0-element Array{Int64,1} |
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| 7 |
|
|
| The Julia Express |
|
|
| Array assignment: |
|
|
| x = collect(reshape(1:8, 2, 4)) |
|
|
| x[:,2:3] = [1 2] |
|
|
| # error; size mismatch |
|
|
| x[:,2:3] .= [1 2] |
|
|
| # OK, broadcasting with . |
|
|
| x[:,2:3] = repeat([1 2], 2) # OK |
|
|
| x[:,2:3] .= 3 |
|
|
| # OK, need to use broadcast with . |
|
|
| Arrays are assigned and passed by reference. Therefore copying is provided: |
|
|
| x = Array{Any}(undef, 2) |
|
|
| x[1] = ones(2) |
|
|
| x[2] = trues(3) |
|
|
| a = x |
|
|
| b = copy(x) |
|
|
| # shallow copy |
|
|
| c = deepcopy(x) # deep copy |
|
|
| x[1] = "Bang" |
|
|
| x[2][1] = false |
|
|
| a |
|
|
| b |
|
|
| c |
|
|
| # identical as x |
|
|
| # only x[2][1] changed from the original x |
|
|
| # contents of the original x |
|
|
| Array types syntax examples: |
|
|
| [1 2]::Array{Int64, 2} |
|
|
| # 2 dimensional array of Int64 |
|
|
| [true; false]::Vector{Bool} # vector of Bool |
|
|
| [1 2; 3 4]::Matrix{Int64} |
|
|
| # matrix of Int64 |
|
|
| Numbers are treated as 0-dimensional containers: |
|
|
| x = 10 |
|
|
| # an integer |
|
|
| x[] |
|
|
| # returns 10 |
|
|
| x[1, 1] |
|
|
| # also returns 10, as trailing 1-s are ignored by Julia |
|
|
| size(x) |
|
|
| # an empty tuple |
|
|
| x = [10] # a one element array can be also indexed with [] |
|
|
| x[] |
|
|
| # gets you 10, this will only work for arrays with exactly 1 element |
|
|
| only(x) |
|
|
| # returns the one and only element of x, otherwise errors |
|
|
| Ref is a special 0-dimensional container that can store any value: |
|
|
| x = Ref("a") # an 0-dimensional containers storing "a" string |
|
|
| x[] |
|
|
| # returns "a" |
|
|
| 4.3 Composite types |
|
|
| You can define and access composite types. Here is an example of a mutable composite type: |
|
|
| mutable struct Point |
|
|
| x::Int64 |
|
|
| y::Float64 |
|
|
| meta |
|
|
| end |
|
|
| p = Point(0, 0.0, "Origin") |
|
|
| p.x |
|
|
| p.meta = 2 |
|
|
| p.x = 1.5 |
|
|
| p.z = 1 |
|
|
| # access field |
|
|
| # change field value |
|
|
| # error, wrong data type |
|
|
| # error - no such field |
|
|
| fieldnames(Point) # get names of type fields |
|
|
| Similarly you can define some type to be immutable by removing mutable keyword (named tuples are anonymous |
| immutable structs). |
|
|
| There are also union types (see documentation of Type Unions in the Julia manual for details). |
|
|
| Finally you can define that your type is a subtype of an abstract type to properly position it in the type hierarchy, or |
| even define your own abstract types (see documentation of Abstract Types in the Julia manual for details). |
|
|
| The Julia Express |
|
|
| 4.4 Dictionaries |
|
|
| 8 |
|
|
| Associative collections (key-value dictionaries): |
|
|
| x = Dict{Float64, Int64}() |
|
|
| # an empty dictionary mapping floats to integers |
|
|
| y = Dict("a"=>1, "b"=>2) |
|
|
| # a filled dictionary |
|
|
| y["a"] |
|
|
| y["c"] |
|
|
| y["c"] = 3 |
|
|
| haskey(y, "b") |
|
|
| keys(y), values(y) |
|
|
| delete!(y, "b") |
|
|
| # element retrieval |
|
|
| # error |
|
|
| # added element |
|
|
| # check if y contains key "b" |
|
|
| # tuple of collections returning keys and values in y |
|
|
| # delete a key from a collection, see also: pop! |
|
|
| get(y, "c", "default") |
|
|
| # return y["c"] or "default" if not haskey(y,"c") |
|
|
| Julia also supports operations on sets, created similarly with Set constructor (please refer to the documentation for |
| details). |
|
|
| 5 Strings |
|
|
| String operations: |
|
|
| "Hi " * "there!" |
| "Ho " ^ 3 |
|
|
| # string concatenation |
|
|
| # repeat string |
|
|
| string("a = ", 123.3) # create using print function |
|
|
| repr(123.3) |
|
|
| # fetch value of show function to a string |
|
|
| occursin("CD", "ABCD") # check if the second string contains the first |
|
|
| "\"\n\t\$" |
|
|
| x = 123 |
|
|
| # C-like escaping in strings, new \$ escape |
|
|
| "$x + 3 = $(x+3)" |
|
|
| # unescaped $ is used for interpolation |
|
|
| "\$199" |
|
|
| # to get a $ symbol you must escape it |
|
|
| raw"D:\path" |
|
|
| # a raw string literal; useful for paths under Windows |
|
|
| s = "abc" |
|
|
| chop(s) |
|
|
| # a string of type String |
|
|
| # remove last character from s, returns a SubString |
|
|
| Both String and SubString are subtypes of AbstractString. The SubString type is used to avoid copying of strings. |
| Usually, when writing your own code, it is best to assume that the user will pass an arbitrary AbstractString. |
|
|
| PCRE regular expressions handling: |
|
|
| r = r"A|B" |
|
|
| # create new regexp |
|
|
| occursin(r, "CD") |
|
|
| # false, no match found |
|
|
| m = match(r, "ACBD") # find first regexp match, see the documentation for details |
|
|
| There is a vast number of string functions — please refer to the documentation. |
|
|
| Warning! Note that you can index-into a string, e.g. "abc"[1] will return you a character 'a'. However, in general |
| Julia encodes standard strings using UTF-8 and indexing is based on bytes not characters, so correct string indexing |
| requires you to understand how UTF-8 encoding works. See the documentation for details. |
|
|
| 6 Programming constructs |
|
|
| The simplest way to bind a value to a new variable is by an assignment: |
|
|
| x = 1.0 |
|
|
| x = 1 |
|
|
| # x is bound to Float64 value |
|
|
| # now x is bound to value Int32 on 32 bit machine and Int64 on 64 bit machine |
|
|
| Expressions can be compound using ; or begin end block: |
|
|
| x = (a = 1; 2 * a) # after: x = 2; a = 1 |
| y = begin |
|
|
| b = 3 |
|
|
| 3 * b |
|
|
| end |
|
|
| # after: y = 9; b = 3 |
|
|
| There are standard programming constructs: |
|
|
| The Julia Express |
|
|
| 9 |
|
|
| if false |
|
|
| # if clause requires Bool test |
|
|
| z = 1 |
|
|
| elseif 1 == 2 |
|
|
| z = 2 |
|
|
| else |
|
|
| a = 3 |
|
|
| end |
|
|
| # after this a = 3 and z is undefined |
|
|
| 1==2 ? "A" : "B" # standard ternary operator |
|
|
| i = 1 |
|
|
| while true |
|
|
| global i += 1 |
|
|
| if i > 10 |
|
|
| break |
|
|
| end |
|
|
| end |
|
|
| for x in 1:10 |
|
|
| # x in collection, can also use = here instead of in |
|
|
| if 3 < x < 6 |
|
|
| continue # skip one iteration |
|
|
| end |
|
|
| println(x) |
|
|
| end |
|
|
| # x is defined in the inner scope of the loop |
|
|
| You can define your own functions: |
|
|
| f(x, y = 10) = x + y |
|
|
| # one line definition of a new function f with y defaulting to 10 |
|
|
| function f(x, y=10) |
|
|
| # the same as above but allowing multiple expressions |
|
|
| # last expression result returned |
|
|
| x + y |
|
|
| end |
|
|
| f(3, 2) |
|
|
| f(3) |
|
|
| (x -> x^2)(3) |
|
|
| () -> 0 |
|
|
| # in the body of the function |
|
|
| # a simple call, 5 returned |
|
|
| # 13 returned |
|
|
| # an anonymous function with a call example |
|
|
| # an anonymous function with no arguments |
|
|
| h(x...) = sum(x)/length(x) - mean(x) # a vararg function; x is a tuple; call first: using Statistics |
|
|
| h(1, 2, 3) |
|
|
| x = (2, 3) |
|
|
| f(x) |
|
|
| f(x...) |
|
|
| # the result is 0 |
|
|
| # a tuple |
|
|
| # error - we try to add 10 to (2,3) |
|
|
| # OK - tuple unpacking |
|
|
| s(x; a = 1, b = 1) = x * a / b # function with keyword arguments a and b |
| s(3, b = 2) |
| q(f::Function, x) = 2 * f(x) |
| q(x -> 2x, 10) |
|
|
| # call with a keyword argument |
|
|
| # a function can be passed around; here we require that f is a Function |
| # 40 returned, no need to use * in 2x (means 2*x) |
| # creation of an anonymous function by do construct, useful eg. in IO |
|
|
| q(10) do x |
| 2 * x |
|
|
| end |
|
|
| m = reshape(1:12, 3, 4) |
|
|
| map(x -> x ^ 2, m) |
|
|
| # 3x4 array returned with transformed data |
|
|
| filter(x -> bitstring(x)[end] == '0', 1:12) # a fancy way to choose even integers from the range |
|
|
| ==(1) |
|
|
| # returns a function that tests for equality to 1 |
|
|
| findall(==(1), 1:10) |
|
|
| # find indices of all elements equal to 1, similar: findfirst, findlast |
|
|
| As a convention functions with name ending with ! change their arguments in-place. See for example resize! in this |
| document. |
|
|
| Default function arguments are evaluated left to right: |
|
|
| y = 10 |
|
|
| f1(x=y) = x; f1() |
|
|
| # 10 |
|
|
| f2(x=y,y=1) = x; f2() # 10 |
|
|
| f3(y=1,x=y) = x; f3() # 1 |
|
|
| f4(;x=y) = x; f4() |
|
|
| # 10 |
|
|
| The Julia Express |
|
|
| 10 |
|
|
| f5(;x=y,y=1) = x; f5() # 10 |
|
|
| f6(;y=1,x=y) = x; f6() # 1 |
|
|
| There is an important part of Julia terminology is that a function can have multiple methods. Each method specifies a |
| behavior of a function for a given set of argument types. This behavior is called multiple dispatch and works only for |
| positional arguments. Here are some short examples. More details are given in Methods section of the Julia manual. |
|
|
| g(x, y) = println("all accepted") # method for g function accepting any type of x and y |
|
|
| function g(x::Int, y::Int) |
|
|
| # method called when both x and y are Int |
|
|
| y, x |
|
|
| end |
|
|
| g(x::Int, y::Bool) = x * y |
| g(1.0, 1) |
|
|
| g(1, 1) |
|
|
| g(1, true) |
|
|
| methods(g) |
|
|
| # this will be called when x is Int and y is Bool |
|
|
| # the first definition is invoked |
|
|
| # the second definition is invoked |
|
|
| # the third definition is invoked |
|
|
| # list all methods defined for g |
|
|
| t(; x::Int64 = 2) = x |
|
|
| # a single keyword argument |
|
|
| t() |
|
|
| # 2 returned |
|
|
| t(; x::Bool = true) = x |
|
|
| # no multiple dispatch for keyword arguments; function overwritten |
|
|
| t() |
|
|
| # true; old function was overwritten |
|
|
| 7 Variable scoping |
|
|
| The following constructs introduce a new variable scope: function, while, for, try/catch, let, struct, mutable struct. |
|
|
| Additionally you can define variables as: |
|
|
| • global: use variable from a global scope of the current module; |
|
|
| • local: define a new variable in a current scope (useful to avoid variable name conflicts, or to make sure variable |
|
|
| is present in outer scope; see examples below); |
|
|
| • const: signal to the compiler that variable type is constant (global only). |
|
|
| Special cases: |
|
|
| t |
|
|
| # error, a variable t does not exist |
|
|
| f() = global t = 1 |
|
|
| f() |
|
|
| # after the call t is defined globally |
|
|
| function f1(n) |
|
|
| x = 0 |
|
|
| for i = 1:n |
|
|
| x = i |
|
|
| end |
|
|
| x |
|
|
| end |
|
|
| f1(10) |
|
|
| function f2(n) |
|
|
| x = 0 |
|
|
| for i = 1:n |
|
|
| local x |
|
|
| x = i |
|
|
| end |
|
|
| x |
|
|
| end |
|
|
| f2(10) |
|
|
| function f3(n) |
|
|
| for i = 1:n |
|
|
| h = i |
|
|
| end |
|
|
| # 10; inside the loop we use the outer local variable |
|
|
| # 0; inside loop we use new local variable |
|
|
| The Julia Express |
|
|
| 11 |
|
|
| h |
|
|
| end |
|
|
| f3(10) |
|
|
| function f4(n) |
|
|
| local h |
|
|
| for i = 1:n |
|
|
| h = i |
|
|
| end |
|
|
| h |
|
|
| end |
|
|
| f4(10) |
|
|
| const x = 2 |
|
|
| # error; h not defined in outer scope |
|
|
| # 10; h is defined in outer scope |
|
|
| x = 3 # warning, value changed; but you should never do this as it might break compiled code |
|
|
| x = 3.0 # error, wrong type |
|
|
| function f() |
|
|
| x::Int = 1 # this is a way to specify a required type of a variable |
|
|
| x = 2.5 # error will be thrown when f() is called as x has to have type Int |
|
|
| end |
|
|
| Global constants speed up code execution as the compiler knows their type. |
|
|
| Loops and comprehensions rebind variables on each iteration, so they are safe to use then creating closures in itera- |
| tion: |
|
|
| Fs = Array{Any}(undef, 2) |
|
|
| for i in 1:2 |
|
|
| Fs[i] = () -> i |
|
|
| end |
|
|
| Fs[1](), Fs[2]() # (1, 2) |
|
|
| Note that for, while, try, and struct use a so called soft local scope. Simplifying a bit this means that if they are used in |
| a top level (global) scope they overwrite existing global variables if you are in an interactive mode (REPL, notebook): |
|
|
| julia> x = 5 |
|
|
| 5 |
|
|
| julia> for i in 1:10 |
|
|
| x = i |
|
|
| end |
|
|
| julia> x |
|
|
| 10 |
|
|
| However, the same code passed in an non-interactive session prints a warning and does not overwrite a global vari- |
| able: |
|
|
| | Warning: Assignment to |
|
|
| ~$ julia -e "x=5; for i in 1:10 x = i end; println(x)" |
| ‘ |
| ‘ |
| x |
| ‘ |
| ‘ |
| x |
|
|
| by the same name exists: |
| ‘ |
| ‘ |
| local x |
|
|
| to suppress this warning or |
|
|
| ‘ |
| ‘ |
| global x |
|
|
| in soft scope is ambiguous because a global variable |
|
|
| will be treated as a new local. Disambiguate by using |
|
|
| to assign to the existing global variable. |
|
|
| | @ none:1 |
|
|
| 5 |
|
|
| 8 Modules |
|
|
| Modules encapsulate code and each module has its own global name space (module name of Julia REPL is Main). |
|
|
| module M # module name |
|
|
| export x # what module exposes for the world |
|
|
| x = 1 |
|
|
| The Julia Express |
|
|
| 12 |
|
|
| y = 2 # hidden variable |
|
|
| end |
|
|
| varinfo(M) # list exported variables |
|
|
| x |
|
|
| M.y |
|
|
| # not found in global scope |
|
|
| # direct variable access possible |
|
|
| # import all exported variables |
|
|
| # also load standard packages this way, but without . prefix |
|
|
| using .M |
|
|
| #import variable y to global scope (even if not exported) |
|
|
| import .M.y |
|
|
| Rebinding values of variables defined in other modules is not allowed. Here is a short typical example that often |
| surprises people: |
|
|
| sin(1) # works |
|
|
| sin = 1 # fails in module Main you cannot rebind a value defined in module Base |
|
|
| cos = 1 # works, as cos was not called yet so it was not imported from Base into Main |
|
|
| cos # gives 1 |
|
|
| cos(1) # fails - cos is bound to 1 in the module Main |
|
|
| Base.cos(1) # works |
|
|
| 9 Operators |
|
|
| Julia follows standard operators with the following quirks: |
|
|
| true || false |
|
|
| # binary or operator (singletons only), || and && use short-circuit evaluation |
|
|
| [1 2] .& [2 1] |
|
|
| # bitwise and operator (vectorized by .) |
|
|
| [true, false] .&& [true false] # logical and operator (vectorized by .); the syntax creates truth table |
|
|
| 1 < 2 < 3 |
|
|
| # chaining conditions is OK (singletons only without .) |
|
|
| [1 2] .< [2 1] |
|
|
| # for vectorized operators need to add '.' in front |
|
|
| x = [1 2 3] |
|
|
| 2x + 2(x .+ 1) |
|
|
| # multiplication can be omitted between a literal and a variable or a left parenthesis |
|
|
| y = [1, 2, 3] |
|
|
| x + y # an error - dimensions do not match |
|
|
| x .+ y # a 3x3 matrix, dimension broadcasting |
|
|
| x + y' # a 1x3 matrix |
|
|
| x * y # array multiplication, a 1-element vector (not scalar) |
| x .* y # element-wise multiplication, a 3x3 array |
|
|
| x == [1 2 3] # true, object looks the same |
|
|
| x === [1 2 3] # false, objects not identical |
|
|
| z = reshape(1:9, 3, 3) |
|
|
| z + x # error - dimensions do not match |
|
|
| z .+ x # x broadcasted vertically |
|
|
| z .+ y # y broadcasted horizontally |
|
|
| # an explicit broadcast of singleton dimensions |
|
|
| # function + is called for each array element |
|
|
| broadcast(+, [1 2], [1; 2]) |
|
|
| # broadcasting using . operator |
|
|
| using Random |
|
|
| length([randstring(10) for i in 1:5]) # 5 - length of an array |
|
|
| length.([randstring(10) for i in 1:5]) # 5-element array of 10s - lengths of strings |
|
|
| Function broadcasting examples: |
|
|
| t(x::Float64, y::Float64 = 1.0) = x * y |
| t(1.0, 2.0) |
|
|
| # OK |
|
|
| The Julia Express |
|
|
| 13 |
|
|
| t([1.0 2.0]) |
|
|
| t.([1.0 2.0]) |
|
|
| t([1.0 2.0], 2.0) |
|
|
| t.([1.0 2.0], 2.0) |
|
|
| t.(2.0, [1.0 2.0]) |
|
|
| # error |
|
|
| # OK |
|
|
| # error |
|
|
| # OK |
|
|
| # OK |
|
|
| t.([1.0 2.0], [1.0 2.0]) # OK |
|
|
| t.([1.0, 2.0], [1.0 2.0]) # OK |
|
|
| 10 Essential general usage functions |
|
|
| show(collect(1:100)) # show text representation of an object |
|
|
| eps() |
|
|
| # distance from 1.0 to next representable Float64 |
|
|
| nextfloat(2.0) |
|
|
| # next float representable, similarly provided prevfloat |
|
|
| isequal(NaN, NaN) # true |
|
|
| NaN == NaN |
|
|
| NaN === NaN |
|
|
| # false |
|
|
| # true |
|
|
| isequal(1, 1.0) |
|
|
| # true |
|
|
| 1 == 1.0 |
|
|
| 1 === 1.0 |
|
|
| 0.0 == -0.0 |
|
|
| 0.0 === -0.0 |
|
|
| # true |
|
|
| # false |
|
|
| # true |
|
|
| # false |
|
|
| isfinite(Inf) |
|
|
| # false, similarly provided: isinf, isnan |
|
|
| fld(-5, 3), mod(-5, 3) # (-2, 1), division towards minus infinity |
|
|
| div(-5, 3), rem(-5, 3) # (-1, -2), division towards zero |
|
|
| findall(x -> mod(x, 2) == 0, 1:8) # find indices for which function returns true |
|
|
| x = [1 2]; identity(x) === x # true, identity function |
|
|
| @info "Info" |
|
|
| # print information, similarly @warn and @error (see Logging module) |
|
|
| ntuple(x->2x, 3) # create tuple by calling x->2x with values 1, 2 and 3 |
|
|
| @isdefined x |
|
|
| # if variable x is defined |
|
|
| y = Array{Any}(undef,2); isassigned(y, 3) # is 3 in array is assigned (not out of bounds or #undef) |
|
|
| fieldtype(typeof(1:2),:start) # get type of the field in composite type (passed as symbol) |
|
|
| fieldnames(typeof(1:2)) # get field names of a type |
|
|
| zip(1:3, 1:3) |> collect # convert iterables to iterable tuple and pass it to collect |
|
|
| enumerate("abc") # create iterator of tuples (index, collection element) |
|
|
| collect(enumerate("abc")) # and materialize it |
|
|
| isempty("abc") |
|
|
| # check if a collection is empty; strings are treated as collections of characters |
|
|
| 'b' in "abc" |
|
|
| # check if element is in a collection |
|
|
| indexin(collect("abc"), collect("abrakadabra")) # [1, 2, nothing] ('c' not found), needs arrays |
|
|
| findall(in("abrakadabra"), "abc") # [1, 2] ('c' was not found) |
|
|
| unique("abrakadabra") # return unique elements |
|
|
| issubset("abc", "abcd") # check if every element in the first collection is in the second |
|
|
| argmax("abrakadabra") # an index of maximal element (3 - 'r' in this case) |
|
|
| findmax("abrakadabra") # tuple: a maximal element and its index |
|
|
| filter(x->mod(x,2)==0, 1:10) # retain elements of a collection that meet predicate |
|
|
| dump(1:2:5) |
|
|
| # show all user-visible structure of an object |
|
|
| sort(rand(10)) |
|
|
| # sort 10 uniform random values, sort! for in-place operation |
|
|
| 11 Reading and writing data |
|
|
| For I/O details refer documentation. There are numerous packages providing this functionality. Basic operations from |
| DelimitedFiles module: |
|
|
| • readdlm: read from file |
|
|
| • writedlm: write to a file |
|
|
| Warning! Trailing spaces are not discarded if delim=' ' in file reading. |
|
|
| The Julia Express |
|
|
| 14 |
|
|
| 12 Random numbers |
|
|
| Basic random numbers: |
|
|
| Random.seed!(1) # set random number generator seed to 1; needs calling first: using Random |
|
|
| rand() |
|
|
| # generate random number from U[0,1) |
|
|
| rand(3, 4) |
|
|
| # generate 3x4 matrix of random numbers from U[0,1] |
|
|
| rand(2:5, 10) |
|
|
| # generate vector of 10 random integer numbers in range form 2 to 5 |
|
|
| randn(10) |
|
|
| # generate vector of 10 random numbers from standard normal distribution |
|
|
| Advanced randomness form Distributions.jl package (version 0.25.79): |
|
|
| using Distributions # load package |
|
|
| sample(1:10, 10) |
|
|
| # single bootstrap sample from set 1-10 |
|
|
| b = Beta(0.4, 0.8) # Beta distribution with parameters 0.4 and 0.8 |
|
|
| # see documentation for supported distributions |
|
|
| mean(b) |
|
|
| # expected value of distribution b |
|
|
| rand(b, 100) |
|
|
| # 100 independent random samples from distribution b |
|
|
| # see documentation for other supported statistics |
|
|
| 13 Statistics and machine learning |
|
|
| Visit http://juliastats.github.io/ for the details (in particular R-like data frames). |
|
|
| There is a core language construct Missing that allows to represent missing value. |
|
|
| missing # Missing value |
|
|
| ismissing(missing) # true |
|
|
| coalesce(missing, 1, 2) # return first non-missing value, or missing if all are missing |
|
|
| Here are some most basic statistical functions shipped with Julia: |
|
|
| using Statistics # module defining the statistical functions |
|
|
| mean([1, 2, 3]) # mean |
|
|
| var([1, 2, 3]) # variance |
|
|
| std([1, 2, 3]) # standard deviation |
|
|
| quantile(1:100, 0.05) # quantiles |
|
|
| median(1:100) # median |
|
|
| cov(1:5, 5:-1:1) # covariance |
|
|
| cor(1:5, 5:-1:1) # Pearson's correlation |
|
|
| 14 Macros |
|
|
| You can define macros (see documentation for details). Useful standard macros. |
|
|
| Assertions: |
|
|
| @assert 1 == 2 "ERROR" |
|
|
| # 2 macro arguments; error raised |
|
|
| using Test |
|
|
| # load Test package |
|
|
| @test 1 == 2 |
| @test_throws DomainError sqrt(-1) # passed, sqrt(-1) is not possible |
|
|
| # similar to assert; error |
|
|
| Benchmarking: |
|
|
| @time [x for x in 1:10^6]; |
|
|
| # print time and memory |
|
|
| @timed [x for x in 1:10^6]; |
|
|
| # return value, time and memory |
|
|
| @elapsed [x for x in 1:10^6] |
|
|
| # return time |
|
|
| @allocated [x for x in 1:10^6] # return memory |
|
|
| Use BenchmarkTools.jl package (version 1.3.2) for a more powerful benchmarking functionality. |
|
|
| The Julia Express |
|
|
| 15 Plotting |
|
|
| 15 |
|
|
| There are several plotting packages for Julia like Plots.jl (which is an umbrella packages for several plotting backends). |
| Here we show how to use it (version 1.38.0): |
|
|
| using Plots |
|
|
| using Random |
|
|
| Random.seed!(1) # make the plot reproducible |
|
|
| x, y = 1:100, randn(100) |
|
|
| plot(x, y) # line plot |
|
|
| scatter(x, y) # scatter plot |
|
|
| histogram(y) # histogram |
|
|
| bar(y) # barplot |
|
|
| An example reproducing https://matplotlib.org/1.2.1/examples/pylab_examples/histogram_demo.html in which we |
| also use StatsPlots.jl package (version 0.15.4): |
|
|
| using Distributions |
|
|
| using Plots |
|
|
| using Random |
|
|
| using StatsPlots |
|
|
| Random.seed!(1234) |
|
|
| mu, sigma = 100, 15 |
|
|
| x = mu .+ sigma * randn(10000) |
|
|
| histogram(x, |
|
|
| title="Histogram of IQ: \\mu=100, \\sigma=15", |
|
|
| label=nothing, |
|
|
| xlabel="Smarts", |
|
|
| ylabel="Probability", |
|
|
| color="green", |
|
|
| normalize=true) |
|
|
| plot!(Normal(mu, sigma), |
|
|
| color="red", |
|
|
| label=nothing, |
|
|
| linestyle=:dash) |
|
|
| savefig("hist.pdf") |
|
|
| producing: |
|
|
| 16 Working with tabular data |
|
|
| There are multiple packages supporting tabular data for the Julia language. |
|
|
| Here we will show how DataFrames.jl (version 1.4.4) and CSV.jl (version 0.10.8) packages can be used. |
|
|
| Loading a CSV file: |
|
|
| 16 |
|
|
| The Julia Express |
|
|
| using DataFrames |
|
|
| using CSV |
|
|
| path = joinpath(dirname(pathof(DataFrames)), "../docs/src/assets/iris.csv") |
|
|
| df = CSV.read(path, DataFrame); |
|
|
| first(df, 5) # print first 5 rows of a data frame; use the last function for last rows |
|
|
| produces the following output: |
|
|
| 5x5 DataFrame |
|
|
| Row | SepalLength SepalWidth PetalLength PetalWidth Species |
|
|
| | Float64 |
|
|
| Float64 |
|
|
| Float64 |
|
|
| Float64 |
|
|
| String |
|
|
| --------------------------------------------------------------------- |
|
|
| 1 | |
|
|
| 2 | |
|
|
| 3 | |
|
|
| 4 | |
|
|
| 5 | |
|
|
| 5.1 |
|
|
| 4.9 |
|
|
| 4.7 |
|
|
| 4.6 |
|
|
| 5.0 |
|
|
| 3.5 |
|
|
| 3.0 |
|
|
| 3.2 |
|
|
| 3.1 |
|
|
| 3.6 |
|
|
| 1.4 |
|
|
| 1.4 |
|
|
| 1.3 |
|
|
| 1.5 |
|
|
| 1.4 |
|
|
| 0.2 Iris-setosa |
|
|
| 0.2 Iris-setosa |
|
|
| 0.2 Iris-setosa |
|
|
| 0.2 Iris-setosa |
|
|
| 0.2 Iris-setosa |
|
|
| Here is a limited list of most useful operations on a DataFrame we have just read in: |
|
|
| DataFrame(a=1:10, b=rand(10)) # manual creation of a DataFrame from a list of columns |
|
|
| describe(df) # get a summary information about a data frame |
|
|
| df.Species # get a column Species from a data frame without copying |
|
|
| df[!, :Species] # the same as above |
|
|
| df[:, :Species] # the same as above, but perform a copy |
|
|
| df[1, 5] # get a value from row 1 and column 5 (Species again) from a DataFrame |
|
|
| df[1:2, 1:2] # subset a data frame getting two first rows and two first columns |
|
|
| Matrix(df[:, 1:4]) # convert columns 1 to 4 to a matrix |
|
|
| names(df) # get column names in the data frame as strings |
|
|
| nrow(df), ncol(df) # number of rows and columns in a data frame |
|
|
| sort(df, :SepalWidth) # return a new data frame that is sorted by SepalWidth column |
|
|
| filter(:SepalWidth => >(3), df) # return a new data frame with only rows that meet the predicate |
|
|
| push!(df, (1, 2, 3, 4, "Some species")) # add a new row at the end of the data frame |
|
|
| df.key = axes(df, 1) # add a new variable named key to a data frame |
|
|
| # calculate sum of SepalLength column by Species column and store it in x column |
|
|
| combine(groupby(df, :Species), :SepalLength => sum) |
|
|
| # transform df to long format taking SepalLength as values and key and Species as id variable |
|
|
| df2 = stack(df, :SepalLength, [:key, :Species]) |
|
|
| unstack(df2, [:key, :variable], :Species, :value) # a reverse operation - wide to long format |
|
|
| 17 The Joy of Julia |
|
|
| The Julia language is so flexible that it allows you to transform |
|
|
| this |
|
|
| to this |
|
|
| You can fully appreciate it (actually it is an animation of revolving hearts) when you run the code yourself. You can |
| find it here https://github.com/maxbennedich/code-golf/tree/cea06287689868f2342959f9c12f0b629a1d0cf4/hearts. |
|
|
| Please make sure that you run the code on a fast terminal with font that supports Unicode. |
|
|
| |