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from math import sin, cos, sqrt, atan2, radians, asin
import numpy as np
import torch
import os
from torch.distributed import init_process_group, destroy_process_group
import torch.nn.functional as F
import random
def resample_trajectory(x, length=200):
"""
Resamples a trajectory to a new length.
Parameters:
x (np.ndarray): original trajectory, shape (N, 2)
length (int): length of resampled trajectory
Returns:
np.ndarray: resampled trajectory, shape (length, 2)
"""
len_x = len(x)
time_steps = np.arange(length) * (len_x - 1) / (length - 1)
x = x.T
resampled_trajectory = np.zeros((2, length))
for i in range(2):
resampled_trajectory[i] = np.interp(time_steps, np.arange(len_x), x[i])
return resampled_trajectory.T
def time_warping(x, length=200):
"""
Resamples a trajectory to a new length.
"""
len_x = len(x)
time_steps = np.arange(length) * (len_x - 1) / (length - 1)
x = x.T
warped_trajectory = np.zeros((2, length))
for i in range(2):
warped_trajectory[i] = np.interp(time_steps, np.arange(len_x), x[i])
return warped_trajectory.T
def gather(consts: torch.Tensor, t: torch.Tensor):
"""
Gather consts for $t$ and reshape to feature map shape
:param consts: (N, 1, 1)
:param t: (N, H, W)
:return: (N, H, W)
"""
c = consts.gather(-1, t)
return c.reshape(-1, 1, 1)
def q_xt_x0(x0, t, alpha_bar):
# get mean and variance of xt given x0
mean = gather(alpha_bar, t) ** 0.5 * x0
var = 1 - gather(alpha_bar, t)
# sample xt from q(xt | x0)
eps = torch.randn_like(x0).to(x0.device)
xt = mean + (var ** 0.5) * eps
return xt, eps # also return noise
def compute_alpha(beta, t):
beta = torch.cat([torch.zeros(1).to(beta.device), beta], dim=0)
a = (1 - beta).cumprod(dim=0).index_select(0, t + 1).view(-1, 1, 1)
return a
def p_xt(xt, noise, t, next_t, beta, eta=0):
at = compute_alpha(beta.cuda(), t.long())
at_next = compute_alpha(beta, next_t.long())
x0_t = (xt - noise * (1 - at).sqrt()) / at.sqrt()
c1 = (eta * ((1 - at / at_next) * (1 - at_next) / (1 - at)).sqrt())
c2 = ((1 - at_next) - c1 ** 2).sqrt()
eps = torch.randn(xt.shape, device=xt.device)
xt_next = at_next.sqrt() * x0_t + c1 * eps + c2 * noise
return xt_next
def divide_grids(boundary, grids_num):
lati_min, lati_max = boundary['lati_min'], boundary['lati_max']
long_min, long_max = boundary['long_min'], boundary['long_max']
# Divide the latitude and longitude into grids_num intervals.
lati_interval = (lati_max - lati_min) / grids_num
long_interval = (long_max - long_min) / grids_num
# Create arrays of latitude and longitude values.
latgrids = np.arange(lati_min, lati_max, lati_interval)
longrids = np.arange(long_min, long_max, long_interval)
return latgrids, longrids
# calculate the distance between two points
def distance(lat1, lon1, lat2, lon2):
"""
Calculate the great circle distance between two points
on the earth (specified in decimal degrees)
"""
# convert decimal degrees to radians
lon1, lat1, lon2, lat2 = map(radians, [lon1, lat1, lon2, lat2])
# haversine formula
dlon = lon2 - lon1
dlat = lat2 - lat1
a = sin(dlat/2)**2 + cos(lat1) * cos(lat2) * sin(dlon/2)**2
c = 2 * asin(sqrt(a))
r = 6371 # Radius of earth in kilometers. Use 3956 for miles
return c * r * 1000
def set_seed(seed):
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)
if torch.cuda.is_available():
torch.cuda.manual_seed(seed)
torch.cuda.manual_seed_all(seed)
torch.backends.cudnn.deterministic = True
torch.backends.cudnn.benchmark = False
def ddp_setup():
init_process_group(backend="nccl")
torch.cuda.set_device(int(os.environ['LOCAL_RANK']))
def destroy_process_group():
destroy_process_group()
import torch
class IterativeKMeans:
def __init__(self, num_clusters, device, num_iters=100, tol=1e-4):
self.num_clusters = num_clusters
self.num_iters = num_iters
self.tol = tol
self.cluster_centers = None
self.labels = None
self.device = device
def fit(self, X):
# X = torch.tensor(X, dtype=torch.float32).to(self.device)
X = X.clone().detach().to(self.device)
num_samples, num_features = X.shape
indices = torch.randperm(num_samples)[:self.num_clusters]
self.cluster_centers = X[indices].clone().detach()
self.labels = torch.argmin(torch.cdist(X, self.cluster_centers), dim=1).cpu().numpy()
for _ in range(self.num_iters):
distances = torch.cdist(X, self.cluster_centers)
labels = torch.argmin(distances, dim=1)
# new_cluster_centers = torch.stack([X[labels == i].mean(dim=0) for i in range(self.num_clusters)])
new_cluster_centers = torch.stack([X[labels == i].mean(dim=0) if (labels == i).sum() > 0 else self.cluster_centers[i] for i in range(self.num_clusters)])
center_shift = torch.norm(new_cluster_centers - self.cluster_centers, dim=1).sum().item()
if center_shift < self.tol:
break
self.cluster_centers = new_cluster_centers
self.labels = labels.cpu().numpy()
return self.cluster_centers, self.labels
def update(self, new_X, original_X):
combined_X = torch.cat([original_X, new_X], dim=0)
combined_X = combined_X.clone().detach().to(self.device)
for _ in range(self.num_iters):
distances = torch.cdist(combined_X, self.cluster_centers)
labels = torch.argmin(distances, dim=1)
new_cluster_centers = torch.stack([combined_X[labels == i].mean(dim=0) if (labels == i).sum() > 0 else self.cluster_centers[i] for i in range(self.num_clusters)])
center_shift = torch.norm(new_cluster_centers - self.cluster_centers, dim=1).sum().item()
if center_shift < self.tol:
break
self.cluster_centers = new_cluster_centers
self.labels = labels.cpu().numpy()
return self.cluster_centers, self.labels
def predict(self, X):
# X = torch.tensor(X, dtype=torch.float32).to(self.device)
X = X.clone().detach().to(self.device)
distances = torch.cdist(X, self.cluster_centers)
labels = torch.argmin(distances, dim=1)
return labels
def to(self, device):
self.device = device
if self.cluster_centers is not None:
self.cluster_centers = self.cluster_centers.to(device)
return self
def assign_labels(prototypes, features):
# Calculate pairwise distances between all features and prototypes
distances = F.pairwise_distance(features.unsqueeze(1), prototypes.unsqueeze(0))
# Find the index of the prototype with the minimum distance (on the second dimension)
labels = torch.argmin(distances, dim=-1)
return labels
def get_positive_negative_pairs(prototypes, samples):
positive_pairs = []
negative_pairs = []
for sample in samples:
distances = F.pairwise_distance(sample.unsqueeze(0), prototypes)
pos_idx = torch.argmin(distances).item()
neg_idx = torch.argmax(distances).item()
positive_pairs.append(prototypes[pos_idx])
negative_pairs.append(prototypes[neg_idx])
return torch.stack(positive_pairs), torch.stack(negative_pairs)
def mask_data_general(x: torch.Tensor):
"""Mask the input data"""
mask = torch.ones_like(x)
mask[:, :, 1:-1] = 0
return x * mask.float()
def continuous_mask_data(x: torch.Tensor, mask_ratio: float = 0.5):
"""
Mask a continuous block of the input data.
It keeps the first and last elements unmasked.
"""
mask = torch.ones_like(x)
traj_length = x.shape[2]
if traj_length <= 2:
return x * mask.float()
masked_length = int((traj_length - 2) * mask_ratio)
if masked_length == 0:
return x * mask.float()
# The start of the mask is between the first and the last but one element.
# The selection ensures that the mask does not run over the second to last element.
mask_start = random.randint(1, traj_length - 2 - masked_length)
mask_end = mask_start + masked_length
mask[:, :, mask_start:mask_end] = 0
return x * mask.float()
def update_npy(file_path, data):
if os.path.exists(file_path):
existing_data = np.load(file_path, allow_pickle=True).item()
existing_data.update(data)
else:
existing_data = data
np.save(file_path, existing_data)
def haversine(lat1, lon1, lat2, lon2):
# Convert degrees to radians
lat1, lon1, lat2, lon2 = map(np.radians, [lat1, lon1, lat2, lon2])
# Haversine formula
dlat = lat2 - lat1
dlon = lon2 - lon1
a = np.sin(dlat / 2.0)**2 + np.cos(lat1) * np.cos(lat2) * np.sin(dlon / 2.0)**2
c = 2 * np.arcsin(np.sqrt(a))
r = 6371 # Radius of Earth in kilometers
return c * r * 1000 # Return distance in meters
def continuous_time_based_mask(x: torch.Tensor, points_to_mask: int):
"""
Mask a continuous block of the input data based on a fixed number of points.
It keeps the first and last elements unmasked.
Args:
x (torch.Tensor): Input tensor of shape (batch, features, length).
points_to_mask (int): The number of continuous points to mask.
"""
mask = torch.ones_like(x)
traj_length = x.shape[2]
# 确保有足够的点可以遮蔽 (首尾点+遮蔽段)
if traj_length <= points_to_mask + 2:
# 如果轨迹太短,无法满足遮蔽要求,则不进行遮蔽
return x * mask.float()
# 随机选择遮蔽的起始位置
# 起始位置必须在第一个点之后,并确保遮蔽段不会超出倒数第二个点
mask_start = random.randint(1, traj_length - 1 - points_to_mask)
mask_end = mask_start + points_to_mask
mask[:, :, mask_start:mask_end] = 0
return x * mask.float()
def mask_multiple_segments(x: torch.Tensor, points_per_segment: list):
"""
Mask multiple non-overlapping continuous segments in the input data.
Keeps the first and last elements unmasked.
Args:
x (torch.Tensor): Input tensor of shape (batch, features, length).
points_per_segment (list of int): List containing the length of each segment to mask.
"""
mask = torch.ones_like(x)
traj_length = x.shape[2]
# Sort segments by length, descending, to place larger gaps first
segments = sorted(points_per_segment, reverse=True)
total_mask_points = sum(segments)
# Check if there's enough space for all masks and endpoints
if traj_length < total_mask_points + 2:
return x * mask.float()
# Generate a list of all possible start indices for masking
# Exclude first and last points: [1, ..., traj_length-2]
possible_indices = list(range(1, traj_length - 1))
masked_intervals = []
for seg_length in segments:
# Find valid start positions for the current segment
valid_starts = []
for i in possible_indices:
# A start is valid if the segment [i, i + seg_length) does not overlap with existing masked intervals
# and does not go out of bounds
if i + seg_length > traj_length - 1:
continue
is_valid = True
for start, end in masked_intervals:
# Check for overlap: [i, i+seg_length) vs [start, end)
if not (i + seg_length <= start or i >= end):
is_valid = False
break
if is_valid:
valid_starts.append(i)
if not valid_starts:
# Not enough space for this segment, continue to next (smaller) one
continue
# Choose a random start position and apply the mask
start_pos = random.choice(valid_starts)
end_pos = start_pos + seg_length
mask[:, :, start_pos:end_pos] = 0
# Record the masked interval and remove these indices from possible choices
masked_intervals.append((start_pos, end_pos))
# Update possible_indices by removing the masked range
indices_to_remove = set(range(start_pos, end_pos))
possible_indices = [idx for idx in possible_indices if idx not in indices_to_remove]
return x * mask.float()
def get_data_paths(data_config, for_train=True):
"""Get the file paths for training or testing data for TKY-like structure.
Assumes data_config.traj_path1 points to a directory containing train.h5 and test.h5.
"""
base_path = data_config.traj_path1
if not isinstance(base_path, str):
base_path = str(base_path)
# Check if we're using temporal split data
if hasattr(data_config, 'dataset') and 'temporal' in data_config.dataset:
if for_train:
file_path = os.path.join(base_path, "train_temporal.h5")
else:
file_path = os.path.join(base_path, "test_temporal.h5")
else:
# Use the original file names
if for_train:
file_path = os.path.join(base_path, "train.h5")
else:
file_path = os.path.join(base_path, "test.h5")
return [file_path] |