"""Build data/metadata.csv and scripts/cache/clusters.csv from raw ViViD-5k data. Loads the 515 MB COCO json once (~1-2 min). Fails loudly on any mismatch between images, point files, split entries, and COCO entries. """ import json import sys from pathlib import Path import numpy as np import pandas as pd from tqdm import tqdm sys.path.insert(0, str(Path(__file__).resolve().parent)) from vivid_utils import load_splits, parse_bbox ROOT = Path(__file__).resolve().parents[1] DATA = ROOT / "data" CACHE = ROOT / "scripts" / "cache" GRAPE_CATEGORY_ID = 1 def main(): splits = load_splits(DATA) img_files = {p.name: p for p in (DATA / "imgs").iterdir()} point_files = {p.stem: p for p in (DATA / "anns" / "points").glob("*.npy")} errors = [] for name in splits: if name not in img_files: errors.append(f"in split but no image file: {name}") if Path(name).stem not in point_files: errors.append(f"no points npy for image: {name}") for name in img_files: if name not in splits: errors.append(f"image not in any split: {name}") if errors: print("\n".join(errors), file=sys.stderr) sys.exit(f"ABORT: {len(errors)} consistency errors") print("Loading COCO json (this takes a minute)...") coco = json.loads((DATA / "anns" / "instances_updated.json").read_text()) coco_by_id = {im["id"]: im for im in coco["images"]} coco_by_name = {im["file_name"]: im for im in coco["images"]} missing_coco = [n for n in splits if n not in coco_by_name] if missing_coco: sys.exit(f"ABORT: {len(missing_coco)} images missing from COCO json: {missing_coco[:5]}") cluster_count = {n: 0 for n in splits} cluster_rows = [] skipped_ids = [] for ann in tqdm(coco["annotations"], desc="annotations"): if ann["category_id"] != GRAPE_CATEGORY_ID: continue if not ann["bbox"]: skipped_ids.append(ann["id"]) continue im = coco_by_id[ann["image_id"]] name = im["file_name"] cluster_count[name] += 1 x, y, w, h = parse_bbox(ann["bbox"]) cluster_rows.append( {"file_name": name, "bbox_w": w, "bbox_h": h, "rel_area": (w * h) / (im["width"] * im["height"])} ) if skipped_ids: print(f"WARNING: skipped {len(skipped_ids)} degenerate annotations " f"(empty bbox): ids={sorted(skipped_ids)}") rows = [] for name, split in tqdm(sorted(splits.items()), desc="images"): pts = np.load(point_files[Path(name).stem]) if pts.ndim != 2 or pts.shape[1] != 2: sys.exit(f"ABORT: unexpected points shape {pts.shape} for {name}") im = coco_by_name[name] rows.append( {"file_name": name, "split": split, "berry_count": len(pts), "cluster_count": cluster_count[name], "width": im["width"], "height": im["height"]} ) meta = pd.DataFrame(rows) meta.to_csv(DATA / "metadata.csv", index=False) CACHE.mkdir(parents=True, exist_ok=True) pd.DataFrame(cluster_rows).to_csv(CACHE / "clusters.csv", index=False) print(f"TOTALS images={len(meta)} berries={meta.berry_count.sum()} " f"clusters={meta.cluster_count.sum()}") print(meta.groupby("split").size()) if __name__ == "__main__": main()