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README.md
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---
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license: cc-by-nc-4.0
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task_categories:
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- video-classification
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- visual-question-answering
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language:
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- en
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tags:
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- laboratory
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- life-science
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- protocol-compliance
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- egocentric-video
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- biology
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- wet-lab
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size_categories:
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- n<1K
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configs:
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- config_name: XMglass
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data_files:
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- path: XMglass/xm.csv
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split: train
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- config_name: DJI
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data_files:
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- path: DJI/dji.csv
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split: train
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---
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# LSV: Laboratory Science Video Dataset
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## Dataset Description
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LSV is a multi-view video dataset of wet-lab biology experiments, captured from both **first-person** (XMglass smart glasses) and **third-person** (DJI action camera) perspectives. Each video records a researcher performing a laboratory protocol and is annotated with the corresponding protocol text, scene type, and—where applicable—deliberate procedural errors.
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The dataset is designed for research on:
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- **Protocol compliance monitoring** — detecting whether a procedure was followed correctly
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- **Procedural error detection** — identifying specific deviations from standard protocols
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- **Egocentric video understanding** — understanding lab activities from a first-person view
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- **Video-language grounding** — linking protocol text to video segments
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## Dataset Structure
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```
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LSV/
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├── XMglass/
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│ ├── xm.csv # Metadata (90 entries)
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│ ├── XMprotocol/ # Protocol text files (22 files)
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│ └── XMvideo/ # Video files (105 files, ~75 GB)
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├── DJI/
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│ ├── dji.csv # Metadata (161 entries)
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│ ├── DJI-Protocol/ # Protocol text files (17 files)
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│ └── DJI-Video/ # Video & image files (251 files, ~219 GB)
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```
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## Metadata Fields
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Both CSV files share the following columns:
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| Column | Description |
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|--------|-------------|
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| `Slice_ID` | Unique identifier (e.g., `XM_001`, `DJI-001`) |
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| `Exp_ID` | Experiment group identifier |
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| `Date` | Recording date |
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| `Video Name` | Filename of the video/image |
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| `Scene` | Recording location (`TC hood`, `bench`, `TC room`, `TC`) |
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| `Operation` | Description of the procedure performed |
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| `Protocol` | Filename of the corresponding protocol in the protocol folder |
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| `Issue (if any)` | Description of intentional procedural errors, if present |
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| `Length` | Duration of the video |
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| `Time_stamp` | Timestamps of protocol steps within the video |
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| `Tools` | Lab equipment used |
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## Data Collection
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### XMglass (First-Person View)
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- **Device**: XM smart glasses with built-in camera
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- **Entries**: 90 annotated video clips
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- **Scenes**: Tissue culture (TC) hood, bench, TC room
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### DJI (Third-Person View)
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- **Device**: DJI action camera
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- **Entries**: 161 (127 videos + 34 images)
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- **Scenes**: TC hood, bench, TC room
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- **Note**: Some experiments include paired first-person and third-person recordings of the same procedure
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## Covered Procedures
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The dataset covers a range of common molecular biology and cell culture techniques, including:
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- Cell line passaging and seeding (HEK293T, iPSCs, cancer cell lines)
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- Lentiviral packaging, collection, and infection
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- CRISPR/Cas9 delivery
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- PCR reaction setup and colony PCR
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- Serial dilution
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- DNA gel electrophoresis (E-gel loading)
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- RNA extraction
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- Cell freezing and thawing
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- Restriction digestion, Gibson assembly, Golden Gate reaction
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- Transformation
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- MiniPrep and NanoDrop quantification
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- FACS staining
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## Error Annotations
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Many videos include **deliberate procedural errors** with detailed descriptions. Examples:
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- Skipping a pipetting step
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- Not changing pipette tips between reagents
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- Adding reagents in the wrong order
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- Omitting incubation or mixing steps
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- Forgetting to add a critical reagent
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These error annotations enable benchmarking of automated protocol-compliance systems.
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## Usage
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```python
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from datasets import load_dataset
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# Load XMglass metadata
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xm = load_dataset("YinkaiW/LSV", name="XMglass", split="train")
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# Load DJI metadata
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dji = load_dataset("YinkaiW/LSV", name="DJI", split="train")
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```
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## License
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This dataset is released under the [CC BY-NC 4.0](https://creativecommons.org/licenses/by-nc/4.0/) license.
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