| | """ |
| | The image module supports basic image loading, rescaling and display |
| | operations. |
| | """ |
| |
|
| | import math |
| | import os |
| | import logging |
| | from pathlib import Path |
| | import warnings |
| |
|
| | import numpy as np |
| | import PIL.Image |
| | import PIL.PngImagePlugin |
| |
|
| | import matplotlib as mpl |
| | from matplotlib import _api, cbook |
| | |
| | from matplotlib import _image |
| | |
| | |
| | from matplotlib._image import * |
| | import matplotlib.artist as martist |
| | import matplotlib.colorizer as mcolorizer |
| | from matplotlib.backend_bases import FigureCanvasBase |
| | import matplotlib.colors as mcolors |
| | from matplotlib.transforms import ( |
| | Affine2D, BboxBase, Bbox, BboxTransform, BboxTransformTo, |
| | IdentityTransform, TransformedBbox) |
| |
|
| | _log = logging.getLogger(__name__) |
| |
|
| | |
| | _interpd_ = { |
| | 'auto': _image.NEAREST, |
| | 'none': _image.NEAREST, |
| | 'nearest': _image.NEAREST, |
| | 'bilinear': _image.BILINEAR, |
| | 'bicubic': _image.BICUBIC, |
| | 'spline16': _image.SPLINE16, |
| | 'spline36': _image.SPLINE36, |
| | 'hanning': _image.HANNING, |
| | 'hamming': _image.HAMMING, |
| | 'hermite': _image.HERMITE, |
| | 'kaiser': _image.KAISER, |
| | 'quadric': _image.QUADRIC, |
| | 'catrom': _image.CATROM, |
| | 'gaussian': _image.GAUSSIAN, |
| | 'bessel': _image.BESSEL, |
| | 'mitchell': _image.MITCHELL, |
| | 'sinc': _image.SINC, |
| | 'lanczos': _image.LANCZOS, |
| | 'blackman': _image.BLACKMAN, |
| | 'antialiased': _image.NEAREST, |
| | } |
| |
|
| | interpolations_names = set(_interpd_) |
| |
|
| |
|
| | def composite_images(images, renderer, magnification=1.0): |
| | """ |
| | Composite a number of RGBA images into one. The images are |
| | composited in the order in which they appear in the *images* list. |
| | |
| | Parameters |
| | ---------- |
| | images : list of Images |
| | Each must have a `make_image` method. For each image, |
| | `can_composite` should return `True`, though this is not |
| | enforced by this function. Each image must have a purely |
| | affine transformation with no shear. |
| | |
| | renderer : `.RendererBase` |
| | |
| | magnification : float, default: 1 |
| | The additional magnification to apply for the renderer in use. |
| | |
| | Returns |
| | ------- |
| | image : (M, N, 4) `numpy.uint8` array |
| | The composited RGBA image. |
| | offset_x, offset_y : float |
| | The (left, bottom) offset where the composited image should be placed |
| | in the output figure. |
| | """ |
| | if len(images) == 0: |
| | return np.empty((0, 0, 4), dtype=np.uint8), 0, 0 |
| |
|
| | parts = [] |
| | bboxes = [] |
| | for image in images: |
| | data, x, y, trans = image.make_image(renderer, magnification) |
| | if data is not None: |
| | x *= magnification |
| | y *= magnification |
| | parts.append((data, x, y, image._get_scalar_alpha())) |
| | bboxes.append( |
| | Bbox([[x, y], [x + data.shape[1], y + data.shape[0]]])) |
| |
|
| | if len(parts) == 0: |
| | return np.empty((0, 0, 4), dtype=np.uint8), 0, 0 |
| |
|
| | bbox = Bbox.union(bboxes) |
| |
|
| | output = np.zeros( |
| | (int(bbox.height), int(bbox.width), 4), dtype=np.uint8) |
| |
|
| | for data, x, y, alpha in parts: |
| | trans = Affine2D().translate(x - bbox.x0, y - bbox.y0) |
| | _image.resample(data, output, trans, _image.NEAREST, |
| | resample=False, alpha=alpha) |
| |
|
| | return output, bbox.x0 / magnification, bbox.y0 / magnification |
| |
|
| |
|
| | def _draw_list_compositing_images( |
| | renderer, parent, artists, suppress_composite=None): |
| | """ |
| | Draw a sorted list of artists, compositing images into a single |
| | image where possible. |
| | |
| | For internal Matplotlib use only: It is here to reduce duplication |
| | between `Figure.draw` and `Axes.draw`, but otherwise should not be |
| | generally useful. |
| | """ |
| | has_images = any(isinstance(x, _ImageBase) for x in artists) |
| |
|
| | |
| | not_composite = (suppress_composite if suppress_composite is not None |
| | else renderer.option_image_nocomposite()) |
| |
|
| | if not_composite or not has_images: |
| | for a in artists: |
| | a.draw(renderer) |
| | else: |
| | |
| | image_group = [] |
| | mag = renderer.get_image_magnification() |
| |
|
| | def flush_images(): |
| | if len(image_group) == 1: |
| | image_group[0].draw(renderer) |
| | elif len(image_group) > 1: |
| | data, l, b = composite_images(image_group, renderer, mag) |
| | if data.size != 0: |
| | gc = renderer.new_gc() |
| | gc.set_clip_rectangle(parent.bbox) |
| | gc.set_clip_path(parent.get_clip_path()) |
| | renderer.draw_image(gc, round(l), round(b), data) |
| | gc.restore() |
| | del image_group[:] |
| |
|
| | for a in artists: |
| | if (isinstance(a, _ImageBase) and a.can_composite() and |
| | a.get_clip_on() and not a.get_clip_path()): |
| | image_group.append(a) |
| | else: |
| | flush_images() |
| | a.draw(renderer) |
| | flush_images() |
| |
|
| |
|
| | def _resample( |
| | image_obj, data, out_shape, transform, *, resample=None, alpha=1): |
| | """ |
| | Convenience wrapper around `._image.resample` to resample *data* to |
| | *out_shape* (with a third dimension if *data* is RGBA) that takes care of |
| | allocating the output array and fetching the relevant properties from the |
| | Image object *image_obj*. |
| | """ |
| | |
| | |
| | |
| | msg = ('Data with more than {n} cannot be accurately displayed. ' |
| | 'Downsampling to less than {n} before displaying. ' |
| | 'To remove this warning, manually downsample your data.') |
| | if data.shape[1] > 2**23: |
| | warnings.warn(msg.format(n='2**23 columns')) |
| | step = int(np.ceil(data.shape[1] / 2**23)) |
| | data = data[:, ::step] |
| | transform = Affine2D().scale(step, 1) + transform |
| | if data.shape[0] > 2**24: |
| | warnings.warn(msg.format(n='2**24 rows')) |
| | step = int(np.ceil(data.shape[0] / 2**24)) |
| | data = data[::step, :] |
| | transform = Affine2D().scale(1, step) + transform |
| | |
| | |
| | |
| | interpolation = image_obj.get_interpolation() |
| | if interpolation in ['antialiased', 'auto']: |
| | |
| | |
| | pos = np.array([[0, 0], [data.shape[1], data.shape[0]]]) |
| | disp = transform.transform(pos) |
| | dispx = np.abs(np.diff(disp[:, 0])) |
| | dispy = np.abs(np.diff(disp[:, 1])) |
| | if ((dispx > 3 * data.shape[1] or |
| | dispx == data.shape[1] or |
| | dispx == 2 * data.shape[1]) and |
| | (dispy > 3 * data.shape[0] or |
| | dispy == data.shape[0] or |
| | dispy == 2 * data.shape[0])): |
| | interpolation = 'nearest' |
| | else: |
| | interpolation = 'hanning' |
| | out = np.zeros(out_shape + data.shape[2:], data.dtype) |
| | if resample is None: |
| | resample = image_obj.get_resample() |
| | _image.resample(data, out, transform, |
| | _interpd_[interpolation], |
| | resample, |
| | alpha, |
| | image_obj.get_filternorm(), |
| | image_obj.get_filterrad()) |
| | return out |
| |
|
| |
|
| | def _rgb_to_rgba(A): |
| | """ |
| | Convert an RGB image to RGBA, as required by the image resample C++ |
| | extension. |
| | """ |
| | rgba = np.zeros((A.shape[0], A.shape[1], 4), dtype=A.dtype) |
| | rgba[:, :, :3] = A |
| | if rgba.dtype == np.uint8: |
| | rgba[:, :, 3] = 255 |
| | else: |
| | rgba[:, :, 3] = 1.0 |
| | return rgba |
| |
|
| |
|
| | class _ImageBase(mcolorizer.ColorizingArtist): |
| | """ |
| | Base class for images. |
| | |
| | interpolation and cmap default to their rc settings |
| | |
| | cmap is a colors.Colormap instance |
| | norm is a colors.Normalize instance to map luminance to 0-1 |
| | |
| | extent is data axes (left, right, bottom, top) for making image plots |
| | registered with data plots. Default is to label the pixel |
| | centers with the zero-based row and column indices. |
| | |
| | Additional kwargs are matplotlib.artist properties |
| | """ |
| | zorder = 0 |
| |
|
| | def __init__(self, ax, |
| | cmap=None, |
| | norm=None, |
| | colorizer=None, |
| | interpolation=None, |
| | origin=None, |
| | filternorm=True, |
| | filterrad=4.0, |
| | resample=False, |
| | *, |
| | interpolation_stage=None, |
| | **kwargs |
| | ): |
| | super().__init__(self._get_colorizer(cmap, norm, colorizer)) |
| | if origin is None: |
| | origin = mpl.rcParams['image.origin'] |
| | _api.check_in_list(["upper", "lower"], origin=origin) |
| | self.origin = origin |
| | self.set_filternorm(filternorm) |
| | self.set_filterrad(filterrad) |
| | self.set_interpolation(interpolation) |
| | self.set_interpolation_stage(interpolation_stage) |
| | self.set_resample(resample) |
| | self.axes = ax |
| |
|
| | self._imcache = None |
| |
|
| | self._internal_update(kwargs) |
| |
|
| | def __str__(self): |
| | try: |
| | shape = self.get_shape() |
| | return f"{type(self).__name__}(shape={shape!r})" |
| | except RuntimeError: |
| | return type(self).__name__ |
| |
|
| | def __getstate__(self): |
| | |
| | return {**super().__getstate__(), "_imcache": None} |
| |
|
| | def get_size(self): |
| | """Return the size of the image as tuple (numrows, numcols).""" |
| | return self.get_shape()[:2] |
| |
|
| | def get_shape(self): |
| | """ |
| | Return the shape of the image as tuple (numrows, numcols, channels). |
| | """ |
| | if self._A is None: |
| | raise RuntimeError('You must first set the image array') |
| |
|
| | return self._A.shape |
| |
|
| | def set_alpha(self, alpha): |
| | """ |
| | Set the alpha value used for blending - not supported on all backends. |
| | |
| | Parameters |
| | ---------- |
| | alpha : float or 2D array-like or None |
| | """ |
| | martist.Artist._set_alpha_for_array(self, alpha) |
| | if np.ndim(alpha) not in (0, 2): |
| | raise TypeError('alpha must be a float, two-dimensional ' |
| | 'array, or None') |
| | self._imcache = None |
| |
|
| | def _get_scalar_alpha(self): |
| | """ |
| | Get a scalar alpha value to be applied to the artist as a whole. |
| | |
| | If the alpha value is a matrix, the method returns 1.0 because pixels |
| | have individual alpha values (see `~._ImageBase._make_image` for |
| | details). If the alpha value is a scalar, the method returns said value |
| | to be applied to the artist as a whole because pixels do not have |
| | individual alpha values. |
| | """ |
| | return 1.0 if self._alpha is None or np.ndim(self._alpha) > 0 \ |
| | else self._alpha |
| |
|
| | def changed(self): |
| | """ |
| | Call this whenever the mappable is changed so observers can update. |
| | """ |
| | self._imcache = None |
| | super().changed() |
| |
|
| | def _make_image(self, A, in_bbox, out_bbox, clip_bbox, magnification=1.0, |
| | unsampled=False, round_to_pixel_border=True): |
| | """ |
| | Normalize, rescale, and colormap the image *A* from the given *in_bbox* |
| | (in data space), to the given *out_bbox* (in pixel space) clipped to |
| | the given *clip_bbox* (also in pixel space), and magnified by the |
| | *magnification* factor. |
| | |
| | Parameters |
| | ---------- |
| | A : ndarray |
| | |
| | - a (M, N) array interpreted as scalar (greyscale) image, |
| | with one of the dtypes `~numpy.float32`, `~numpy.float64`, |
| | `~numpy.float128`, `~numpy.uint16` or `~numpy.uint8`. |
| | - (M, N, 4) RGBA image with a dtype of `~numpy.float32`, |
| | `~numpy.float64`, `~numpy.float128`, or `~numpy.uint8`. |
| | |
| | in_bbox : `~matplotlib.transforms.Bbox` |
| | |
| | out_bbox : `~matplotlib.transforms.Bbox` |
| | |
| | clip_bbox : `~matplotlib.transforms.Bbox` |
| | |
| | magnification : float, default: 1 |
| | |
| | unsampled : bool, default: False |
| | If True, the image will not be scaled, but an appropriate |
| | affine transformation will be returned instead. |
| | |
| | round_to_pixel_border : bool, default: True |
| | If True, the output image size will be rounded to the nearest pixel |
| | boundary. This makes the images align correctly with the Axes. |
| | It should not be used if exact scaling is needed, such as for |
| | `.FigureImage`. |
| | |
| | Returns |
| | ------- |
| | image : (M, N, 4) `numpy.uint8` array |
| | The RGBA image, resampled unless *unsampled* is True. |
| | x, y : float |
| | The upper left corner where the image should be drawn, in pixel |
| | space. |
| | trans : `~matplotlib.transforms.Affine2D` |
| | The affine transformation from image to pixel space. |
| | """ |
| | if A is None: |
| | raise RuntimeError('You must first set the image ' |
| | 'array or the image attribute') |
| | if A.size == 0: |
| | raise RuntimeError("_make_image must get a non-empty image. " |
| | "Your Artist's draw method must filter before " |
| | "this method is called.") |
| |
|
| | clipped_bbox = Bbox.intersection(out_bbox, clip_bbox) |
| |
|
| | if clipped_bbox is None: |
| | return None, 0, 0, None |
| |
|
| | out_width_base = clipped_bbox.width * magnification |
| | out_height_base = clipped_bbox.height * magnification |
| |
|
| | if out_width_base == 0 or out_height_base == 0: |
| | return None, 0, 0, None |
| |
|
| | if self.origin == 'upper': |
| | |
| | |
| | |
| | t0 = Affine2D().translate(0, -A.shape[0]).scale(1, -1) |
| | else: |
| | t0 = IdentityTransform() |
| |
|
| | t0 += ( |
| | Affine2D() |
| | .scale( |
| | in_bbox.width / A.shape[1], |
| | in_bbox.height / A.shape[0]) |
| | .translate(in_bbox.x0, in_bbox.y0) |
| | + self.get_transform()) |
| |
|
| | t = (t0 |
| | + (Affine2D() |
| | .translate(-clipped_bbox.x0, -clipped_bbox.y0) |
| | .scale(magnification))) |
| |
|
| | |
| | |
| | |
| | if ((not unsampled) and t.is_affine and round_to_pixel_border and |
| | (out_width_base % 1.0 != 0.0 or out_height_base % 1.0 != 0.0)): |
| | out_width = math.ceil(out_width_base) |
| | out_height = math.ceil(out_height_base) |
| | extra_width = (out_width - out_width_base) / out_width_base |
| | extra_height = (out_height - out_height_base) / out_height_base |
| | t += Affine2D().scale(1.0 + extra_width, 1.0 + extra_height) |
| | else: |
| | out_width = int(out_width_base) |
| | out_height = int(out_height_base) |
| | out_shape = (out_height, out_width) |
| |
|
| | if not unsampled: |
| | if not (A.ndim == 2 or A.ndim == 3 and A.shape[-1] in (3, 4)): |
| | raise ValueError(f"Invalid shape {A.shape} for image data") |
| |
|
| | |
| | |
| | interpolation_stage = self._interpolation_stage |
| | if interpolation_stage in ['antialiased', 'auto']: |
| | pos = np.array([[0, 0], [A.shape[1], A.shape[0]]]) |
| | disp = t.transform(pos) |
| | dispx = np.abs(np.diff(disp[:, 0])) / A.shape[1] |
| | dispy = np.abs(np.diff(disp[:, 1])) / A.shape[0] |
| | if (dispx < 3) or (dispy < 3): |
| | interpolation_stage = 'rgba' |
| | else: |
| | interpolation_stage = 'data' |
| |
|
| | if A.ndim == 2 and interpolation_stage == 'data': |
| | |
| | |
| | |
| | |
| |
|
| | if A.dtype.kind == 'f': |
| | scaled_dtype = np.dtype("f8" if A.dtype.itemsize > 4 else "f4") |
| | if scaled_dtype.itemsize < A.dtype.itemsize: |
| | _api.warn_external(f"Casting input data from {A.dtype}" |
| | f" to {scaled_dtype} for imshow.") |
| | else: |
| | |
| | |
| | |
| | da = A.max().astype("f8") - A.min().astype("f8") |
| | scaled_dtype = "f8" if da > 1e8 else "f4" |
| |
|
| | |
| | A_resampled = _resample(self, A.astype(scaled_dtype), out_shape, t) |
| |
|
| | |
| | if isinstance(self.norm, mcolors.NoNorm): |
| | A_resampled = A_resampled.astype(A.dtype) |
| |
|
| | |
| | |
| | |
| | |
| | mask = (np.where(A.mask, np.float32(np.nan), np.float32(1)) |
| | if A.mask.shape == A.shape |
| | else np.ones_like(A, np.float32)) |
| | |
| | |
| | out_alpha = _resample(self, mask, out_shape, t, resample=True) |
| | del mask |
| | out_mask = np.isnan(out_alpha) |
| | out_alpha[out_mask] = 1 |
| | |
| | alpha = self.get_alpha() |
| | if alpha is not None and np.ndim(alpha) > 0: |
| | out_alpha *= _resample(self, alpha, out_shape, t, resample=True) |
| | |
| | resampled_masked = np.ma.masked_array(A_resampled, out_mask) |
| | output = self.norm(resampled_masked) |
| | else: |
| | if A.ndim == 2: |
| | self.norm.autoscale_None(A) |
| | A = self.to_rgba(A) |
| | alpha = self._get_scalar_alpha() |
| | if A.shape[2] == 3: |
| | |
| | |
| | |
| | output_alpha = (255 * alpha) if A.dtype == np.uint8 else alpha |
| | else: |
| | output_alpha = _resample( |
| | self, A[..., 3], out_shape, t, alpha=alpha) |
| | output = _resample( |
| | self, _rgb_to_rgba(A[..., :3]), out_shape, t, alpha=alpha) |
| | output[..., 3] = output_alpha |
| |
|
| | |
| | |
| | output = self.to_rgba(output, bytes=True, norm=False) |
| | |
| |
|
| | |
| | if A.ndim == 2: |
| | alpha = self._get_scalar_alpha() |
| | alpha_channel = output[:, :, 3] |
| | alpha_channel[:] = ( |
| | alpha_channel.astype(np.float32) * out_alpha * alpha) |
| |
|
| | else: |
| | if self._imcache is None: |
| | self._imcache = self.to_rgba(A, bytes=True, norm=(A.ndim == 2)) |
| | output = self._imcache |
| |
|
| | |
| | subset = TransformedBbox(clip_bbox, t0.inverted()).frozen() |
| | output = output[ |
| | int(max(subset.ymin, 0)): |
| | int(min(subset.ymax + 1, output.shape[0])), |
| | int(max(subset.xmin, 0)): |
| | int(min(subset.xmax + 1, output.shape[1]))] |
| |
|
| | t = Affine2D().translate( |
| | int(max(subset.xmin, 0)), int(max(subset.ymin, 0))) + t |
| |
|
| | return output, clipped_bbox.x0, clipped_bbox.y0, t |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | """ |
| | Normalize, rescale, and colormap this image's data for rendering using |
| | *renderer*, with the given *magnification*. |
| | |
| | If *unsampled* is True, the image will not be scaled, but an |
| | appropriate affine transformation will be returned instead. |
| | |
| | Returns |
| | ------- |
| | image : (M, N, 4) `numpy.uint8` array |
| | The RGBA image, resampled unless *unsampled* is True. |
| | x, y : float |
| | The upper left corner where the image should be drawn, in pixel |
| | space. |
| | trans : `~matplotlib.transforms.Affine2D` |
| | The affine transformation from image to pixel space. |
| | """ |
| | raise NotImplementedError('The make_image method must be overridden') |
| |
|
| | def _check_unsampled_image(self): |
| | """ |
| | Return whether the image is better to be drawn unsampled. |
| | |
| | The derived class needs to override it. |
| | """ |
| | return False |
| |
|
| | @martist.allow_rasterization |
| | def draw(self, renderer): |
| | |
| | if not self.get_visible(): |
| | self.stale = False |
| | return |
| | |
| | if self.get_array().size == 0: |
| | self.stale = False |
| | return |
| | |
| | gc = renderer.new_gc() |
| | self._set_gc_clip(gc) |
| | gc.set_alpha(self._get_scalar_alpha()) |
| | gc.set_url(self.get_url()) |
| | gc.set_gid(self.get_gid()) |
| | if (renderer.option_scale_image() |
| | and self._check_unsampled_image() |
| | and self.get_transform().is_affine): |
| | im, l, b, trans = self.make_image(renderer, unsampled=True) |
| | if im is not None: |
| | trans = Affine2D().scale(im.shape[1], im.shape[0]) + trans |
| | renderer.draw_image(gc, l, b, im, trans) |
| | else: |
| | im, l, b, trans = self.make_image( |
| | renderer, renderer.get_image_magnification()) |
| | if im is not None: |
| | renderer.draw_image(gc, l, b, im) |
| | gc.restore() |
| | self.stale = False |
| |
|
| | def contains(self, mouseevent): |
| | """Test whether the mouse event occurred within the image.""" |
| | if (self._different_canvas(mouseevent) |
| | |
| | or not self.axes.contains(mouseevent)[0]): |
| | return False, {} |
| | |
| | |
| | |
| | |
| | trans = self.get_transform().inverted() |
| | x, y = trans.transform([mouseevent.x, mouseevent.y]) |
| | xmin, xmax, ymin, ymax = self.get_extent() |
| | |
| | inside = (x is not None and (x - xmin) * (x - xmax) <= 0 |
| | and y is not None and (y - ymin) * (y - ymax) <= 0) |
| | return inside, {} |
| |
|
| | def write_png(self, fname): |
| | """Write the image to png file *fname*.""" |
| | im = self.to_rgba(self._A[::-1] if self.origin == 'lower' else self._A, |
| | bytes=True, norm=True) |
| | PIL.Image.fromarray(im).save(fname, format="png") |
| |
|
| | @staticmethod |
| | def _normalize_image_array(A): |
| | """ |
| | Check validity of image-like input *A* and normalize it to a format suitable for |
| | Image subclasses. |
| | """ |
| | A = cbook.safe_masked_invalid(A, copy=True) |
| | if A.dtype != np.uint8 and not np.can_cast(A.dtype, float, "same_kind"): |
| | raise TypeError(f"Image data of dtype {A.dtype} cannot be " |
| | f"converted to float") |
| | if A.ndim == 3 and A.shape[-1] == 1: |
| | A = A.squeeze(-1) |
| | if not (A.ndim == 2 or A.ndim == 3 and A.shape[-1] in [3, 4]): |
| | raise TypeError(f"Invalid shape {A.shape} for image data") |
| | if A.ndim == 3: |
| | |
| | |
| | |
| | |
| | high = 255 if np.issubdtype(A.dtype, np.integer) else 1 |
| | if A.min() < 0 or high < A.max(): |
| | _log.warning( |
| | 'Clipping input data to the valid range for imshow with ' |
| | 'RGB data ([0..1] for floats or [0..255] for integers). ' |
| | 'Got range [%s..%s].', |
| | A.min(), A.max() |
| | ) |
| | A = np.clip(A, 0, high) |
| | |
| | if A.dtype != np.uint8 and np.issubdtype(A.dtype, np.integer): |
| | A = A.astype(np.uint8) |
| | return A |
| |
|
| | def set_data(self, A): |
| | """ |
| | Set the image array. |
| | |
| | Note that this function does *not* update the normalization used. |
| | |
| | Parameters |
| | ---------- |
| | A : array-like or `PIL.Image.Image` |
| | """ |
| | if isinstance(A, PIL.Image.Image): |
| | A = pil_to_array(A) |
| | self._A = self._normalize_image_array(A) |
| | self._imcache = None |
| | self.stale = True |
| |
|
| | def set_array(self, A): |
| | """ |
| | Retained for backwards compatibility - use set_data instead. |
| | |
| | Parameters |
| | ---------- |
| | A : array-like |
| | """ |
| | |
| | |
| | self.set_data(A) |
| |
|
| | def get_interpolation(self): |
| | """ |
| | Return the interpolation method the image uses when resizing. |
| | |
| | One of 'auto', 'antialiased', 'nearest', 'bilinear', 'bicubic', |
| | 'spline16', 'spline36', 'hanning', 'hamming', 'hermite', 'kaiser', |
| | 'quadric', 'catrom', 'gaussian', 'bessel', 'mitchell', 'sinc', 'lanczos', |
| | or 'none'. |
| | """ |
| | return self._interpolation |
| |
|
| | def set_interpolation(self, s): |
| | """ |
| | Set the interpolation method the image uses when resizing. |
| | |
| | If None, use :rc:`image.interpolation`. If 'none', the image is |
| | shown as is without interpolating. 'none' is only supported in |
| | agg, ps and pdf backends and will fall back to 'nearest' mode |
| | for other backends. |
| | |
| | Parameters |
| | ---------- |
| | s : {'auto', 'nearest', 'bilinear', 'bicubic', 'spline16', \ |
| | 'spline36', 'hanning', 'hamming', 'hermite', 'kaiser', 'quadric', 'catrom', \ |
| | 'gaussian', 'bessel', 'mitchell', 'sinc', 'lanczos', 'none'} or None |
| | """ |
| | s = mpl._val_or_rc(s, 'image.interpolation').lower() |
| | _api.check_in_list(interpolations_names, interpolation=s) |
| | self._interpolation = s |
| | self.stale = True |
| |
|
| | def get_interpolation_stage(self): |
| | """ |
| | Return when interpolation happens during the transform to RGBA. |
| | |
| | One of 'data', 'rgba', 'auto'. |
| | """ |
| | return self._interpolation_stage |
| |
|
| | def set_interpolation_stage(self, s): |
| | """ |
| | Set when interpolation happens during the transform to RGBA. |
| | |
| | Parameters |
| | ---------- |
| | s : {'data', 'rgba', 'auto'} or None |
| | Whether to apply up/downsampling interpolation in data or RGBA |
| | space. If None, use :rc:`image.interpolation_stage`. |
| | If 'auto' we will check upsampling rate and if less |
| | than 3 then use 'rgba', otherwise use 'data'. |
| | """ |
| | s = mpl._val_or_rc(s, 'image.interpolation_stage') |
| | _api.check_in_list(['data', 'rgba', 'auto'], s=s) |
| | self._interpolation_stage = s |
| | self.stale = True |
| |
|
| | def can_composite(self): |
| | """Return whether the image can be composited with its neighbors.""" |
| | trans = self.get_transform() |
| | return ( |
| | self._interpolation != 'none' and |
| | trans.is_affine and |
| | trans.is_separable) |
| |
|
| | def set_resample(self, v): |
| | """ |
| | Set whether image resampling is used. |
| | |
| | Parameters |
| | ---------- |
| | v : bool or None |
| | If None, use :rc:`image.resample`. |
| | """ |
| | v = mpl._val_or_rc(v, 'image.resample') |
| | self._resample = v |
| | self.stale = True |
| |
|
| | def get_resample(self): |
| | """Return whether image resampling is used.""" |
| | return self._resample |
| |
|
| | def set_filternorm(self, filternorm): |
| | """ |
| | Set whether the resize filter normalizes the weights. |
| | |
| | See help for `~.Axes.imshow`. |
| | |
| | Parameters |
| | ---------- |
| | filternorm : bool |
| | """ |
| | self._filternorm = bool(filternorm) |
| | self.stale = True |
| |
|
| | def get_filternorm(self): |
| | """Return whether the resize filter normalizes the weights.""" |
| | return self._filternorm |
| |
|
| | def set_filterrad(self, filterrad): |
| | """ |
| | Set the resize filter radius only applicable to some |
| | interpolation schemes -- see help for imshow |
| | |
| | Parameters |
| | ---------- |
| | filterrad : positive float |
| | """ |
| | r = float(filterrad) |
| | if r <= 0: |
| | raise ValueError("The filter radius must be a positive number") |
| | self._filterrad = r |
| | self.stale = True |
| |
|
| | def get_filterrad(self): |
| | """Return the filterrad setting.""" |
| | return self._filterrad |
| |
|
| |
|
| | class AxesImage(_ImageBase): |
| | """ |
| | An image attached to an Axes. |
| | |
| | Parameters |
| | ---------- |
| | ax : `~matplotlib.axes.Axes` |
| | The Axes the image will belong to. |
| | cmap : str or `~matplotlib.colors.Colormap`, default: :rc:`image.cmap` |
| | The Colormap instance or registered colormap name used to map scalar |
| | data to colors. |
| | norm : str or `~matplotlib.colors.Normalize` |
| | Maps luminance to 0-1. |
| | interpolation : str, default: :rc:`image.interpolation` |
| | Supported values are 'none', 'auto', 'nearest', 'bilinear', |
| | 'bicubic', 'spline16', 'spline36', 'hanning', 'hamming', 'hermite', |
| | 'kaiser', 'quadric', 'catrom', 'gaussian', 'bessel', 'mitchell', |
| | 'sinc', 'lanczos', 'blackman'. |
| | interpolation_stage : {'data', 'rgba'}, default: 'data' |
| | If 'data', interpolation |
| | is carried out on the data provided by the user. If 'rgba', the |
| | interpolation is carried out after the colormapping has been |
| | applied (visual interpolation). |
| | origin : {'upper', 'lower'}, default: :rc:`image.origin` |
| | Place the [0, 0] index of the array in the upper left or lower left |
| | corner of the Axes. The convention 'upper' is typically used for |
| | matrices and images. |
| | extent : tuple, optional |
| | The data axes (left, right, bottom, top) for making image plots |
| | registered with data plots. Default is to label the pixel |
| | centers with the zero-based row and column indices. |
| | filternorm : bool, default: True |
| | A parameter for the antigrain image resize filter |
| | (see the antigrain documentation). |
| | If filternorm is set, the filter normalizes integer values and corrects |
| | the rounding errors. It doesn't do anything with the source floating |
| | point values, it corrects only integers according to the rule of 1.0 |
| | which means that any sum of pixel weights must be equal to 1.0. So, |
| | the filter function must produce a graph of the proper shape. |
| | filterrad : float > 0, default: 4 |
| | The filter radius for filters that have a radius parameter, i.e. when |
| | interpolation is one of: 'sinc', 'lanczos' or 'blackman'. |
| | resample : bool, default: False |
| | When True, use a full resampling method. When False, only resample when |
| | the output image is larger than the input image. |
| | **kwargs : `~matplotlib.artist.Artist` properties |
| | """ |
| |
|
| | def __init__(self, ax, |
| | *, |
| | cmap=None, |
| | norm=None, |
| | colorizer=None, |
| | interpolation=None, |
| | origin=None, |
| | extent=None, |
| | filternorm=True, |
| | filterrad=4.0, |
| | resample=False, |
| | interpolation_stage=None, |
| | **kwargs |
| | ): |
| |
|
| | self._extent = extent |
| |
|
| | super().__init__( |
| | ax, |
| | cmap=cmap, |
| | norm=norm, |
| | colorizer=colorizer, |
| | interpolation=interpolation, |
| | origin=origin, |
| | filternorm=filternorm, |
| | filterrad=filterrad, |
| | resample=resample, |
| | interpolation_stage=interpolation_stage, |
| | **kwargs |
| | ) |
| |
|
| | def get_window_extent(self, renderer=None): |
| | x0, x1, y0, y1 = self._extent |
| | bbox = Bbox.from_extents([x0, y0, x1, y1]) |
| | return bbox.transformed(self.get_transform()) |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | |
| | trans = self.get_transform() |
| | |
| | x1, x2, y1, y2 = self.get_extent() |
| | bbox = Bbox(np.array([[x1, y1], [x2, y2]])) |
| | transformed_bbox = TransformedBbox(bbox, trans) |
| | clip = ((self.get_clip_box() or self.axes.bbox) if self.get_clip_on() |
| | else self.get_figure(root=True).bbox) |
| | return self._make_image(self._A, bbox, transformed_bbox, clip, |
| | magnification, unsampled=unsampled) |
| |
|
| | def _check_unsampled_image(self): |
| | """Return whether the image would be better drawn unsampled.""" |
| | return self.get_interpolation() == "none" |
| |
|
| | def set_extent(self, extent, **kwargs): |
| | """ |
| | Set the image extent. |
| | |
| | Parameters |
| | ---------- |
| | extent : 4-tuple of float |
| | The position and size of the image as tuple |
| | ``(left, right, bottom, top)`` in data coordinates. |
| | **kwargs |
| | Other parameters from which unit info (i.e., the *xunits*, |
| | *yunits*, *zunits* (for 3D Axes), *runits* and *thetaunits* (for |
| | polar Axes) entries are applied, if present. |
| | |
| | Notes |
| | ----- |
| | This updates `.Axes.dataLim`, and, if autoscaling, sets `.Axes.viewLim` |
| | to tightly fit the image, regardless of `~.Axes.dataLim`. Autoscaling |
| | state is not changed, so a subsequent call to `.Axes.autoscale_view` |
| | will redo the autoscaling in accord with `~.Axes.dataLim`. |
| | """ |
| | (xmin, xmax), (ymin, ymax) = self.axes._process_unit_info( |
| | [("x", [extent[0], extent[1]]), |
| | ("y", [extent[2], extent[3]])], |
| | kwargs) |
| | if kwargs: |
| | raise _api.kwarg_error("set_extent", kwargs) |
| | xmin = self.axes._validate_converted_limits( |
| | xmin, self.convert_xunits) |
| | xmax = self.axes._validate_converted_limits( |
| | xmax, self.convert_xunits) |
| | ymin = self.axes._validate_converted_limits( |
| | ymin, self.convert_yunits) |
| | ymax = self.axes._validate_converted_limits( |
| | ymax, self.convert_yunits) |
| | extent = [xmin, xmax, ymin, ymax] |
| |
|
| | self._extent = extent |
| | corners = (xmin, ymin), (xmax, ymax) |
| | self.axes.update_datalim(corners) |
| | self.sticky_edges.x[:] = [xmin, xmax] |
| | self.sticky_edges.y[:] = [ymin, ymax] |
| | if self.axes.get_autoscalex_on(): |
| | self.axes.set_xlim((xmin, xmax), auto=None) |
| | if self.axes.get_autoscaley_on(): |
| | self.axes.set_ylim((ymin, ymax), auto=None) |
| | self.stale = True |
| |
|
| | def get_extent(self): |
| | """Return the image extent as tuple (left, right, bottom, top).""" |
| | if self._extent is not None: |
| | return self._extent |
| | else: |
| | sz = self.get_size() |
| | numrows, numcols = sz |
| | if self.origin == 'upper': |
| | return (-0.5, numcols-0.5, numrows-0.5, -0.5) |
| | else: |
| | return (-0.5, numcols-0.5, -0.5, numrows-0.5) |
| |
|
| | def get_cursor_data(self, event): |
| | """ |
| | Return the image value at the event position or *None* if the event is |
| | outside the image. |
| | |
| | See Also |
| | -------- |
| | matplotlib.artist.Artist.get_cursor_data |
| | """ |
| | xmin, xmax, ymin, ymax = self.get_extent() |
| | if self.origin == 'upper': |
| | ymin, ymax = ymax, ymin |
| | arr = self.get_array() |
| | data_extent = Bbox([[xmin, ymin], [xmax, ymax]]) |
| | array_extent = Bbox([[0, 0], [arr.shape[1], arr.shape[0]]]) |
| | trans = self.get_transform().inverted() |
| | trans += BboxTransform(boxin=data_extent, boxout=array_extent) |
| | point = trans.transform([event.x, event.y]) |
| | if any(np.isnan(point)): |
| | return None |
| | j, i = point.astype(int) |
| | |
| | if not (0 <= i < arr.shape[0]) or not (0 <= j < arr.shape[1]): |
| | return None |
| | else: |
| | return arr[i, j] |
| |
|
| |
|
| | class NonUniformImage(AxesImage): |
| |
|
| | def __init__(self, ax, *, interpolation='nearest', **kwargs): |
| | """ |
| | Parameters |
| | ---------- |
| | ax : `~matplotlib.axes.Axes` |
| | The Axes the image will belong to. |
| | interpolation : {'nearest', 'bilinear'}, default: 'nearest' |
| | The interpolation scheme used in the resampling. |
| | **kwargs |
| | All other keyword arguments are identical to those of `.AxesImage`. |
| | """ |
| | super().__init__(ax, **kwargs) |
| | self.set_interpolation(interpolation) |
| |
|
| | def _check_unsampled_image(self): |
| | """Return False. Do not use unsampled image.""" |
| | return False |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | |
| | if self._A is None: |
| | raise RuntimeError('You must first set the image array') |
| | if unsampled: |
| | raise ValueError('unsampled not supported on NonUniformImage') |
| | A = self._A |
| | if A.ndim == 2: |
| | if A.dtype != np.uint8: |
| | A = self.to_rgba(A, bytes=True) |
| | else: |
| | A = np.repeat(A[:, :, np.newaxis], 4, 2) |
| | A[:, :, 3] = 255 |
| | else: |
| | if A.dtype != np.uint8: |
| | A = (255*A).astype(np.uint8) |
| | if A.shape[2] == 3: |
| | B = np.zeros(tuple([*A.shape[0:2], 4]), np.uint8) |
| | B[:, :, 0:3] = A |
| | B[:, :, 3] = 255 |
| | A = B |
| | l, b, r, t = self.axes.bbox.extents |
| | width = int(((round(r) + 0.5) - (round(l) - 0.5)) * magnification) |
| | height = int(((round(t) + 0.5) - (round(b) - 0.5)) * magnification) |
| |
|
| | invertedTransform = self.axes.transData.inverted() |
| | x_pix = invertedTransform.transform( |
| | [(x, b) for x in np.linspace(l, r, width)])[:, 0] |
| | y_pix = invertedTransform.transform( |
| | [(l, y) for y in np.linspace(b, t, height)])[:, 1] |
| |
|
| | if self._interpolation == "nearest": |
| | x_mid = (self._Ax[:-1] + self._Ax[1:]) / 2 |
| | y_mid = (self._Ay[:-1] + self._Ay[1:]) / 2 |
| | x_int = x_mid.searchsorted(x_pix) |
| | y_int = y_mid.searchsorted(y_pix) |
| | |
| | |
| | |
| | im = ( |
| | np.ascontiguousarray(A).view(np.uint32).ravel()[ |
| | np.add.outer(y_int * A.shape[1], x_int)] |
| | .view(np.uint8).reshape((height, width, 4))) |
| | else: |
| | |
| | x_int = np.clip( |
| | self._Ax.searchsorted(x_pix) - 1, 0, len(self._Ax) - 2) |
| | y_int = np.clip( |
| | self._Ay.searchsorted(y_pix) - 1, 0, len(self._Ay) - 2) |
| | idx_int = np.add.outer(y_int * A.shape[1], x_int) |
| | x_frac = np.clip( |
| | np.divide(x_pix - self._Ax[x_int], np.diff(self._Ax)[x_int], |
| | dtype=np.float32), |
| | 0, 1) |
| | y_frac = np.clip( |
| | np.divide(y_pix - self._Ay[y_int], np.diff(self._Ay)[y_int], |
| | dtype=np.float32), |
| | 0, 1) |
| | f00 = np.outer(1 - y_frac, 1 - x_frac) |
| | f10 = np.outer(y_frac, 1 - x_frac) |
| | f01 = np.outer(1 - y_frac, x_frac) |
| | f11 = np.outer(y_frac, x_frac) |
| | im = np.empty((height, width, 4), np.uint8) |
| | for chan in range(4): |
| | ac = A[:, :, chan].reshape(-1) |
| | |
| | |
| | buf = f00 * ac[idx_int] |
| | buf += f10 * ac[A.shape[1]:][idx_int] |
| | buf += f01 * ac[1:][idx_int] |
| | buf += f11 * ac[A.shape[1] + 1:][idx_int] |
| | im[:, :, chan] = buf |
| | return im, l, b, IdentityTransform() |
| |
|
| | def set_data(self, x, y, A): |
| | """ |
| | Set the grid for the pixel centers, and the pixel values. |
| | |
| | Parameters |
| | ---------- |
| | x, y : 1D array-like |
| | Monotonic arrays of shapes (N,) and (M,), respectively, specifying |
| | pixel centers. |
| | A : array-like |
| | (M, N) `~numpy.ndarray` or masked array of values to be |
| | colormapped, or (M, N, 3) RGB array, or (M, N, 4) RGBA array. |
| | """ |
| | A = self._normalize_image_array(A) |
| | x = np.array(x, np.float32) |
| | y = np.array(y, np.float32) |
| | if not (x.ndim == y.ndim == 1 and A.shape[:2] == y.shape + x.shape): |
| | raise TypeError("Axes don't match array shape") |
| | self._A = A |
| | self._Ax = x |
| | self._Ay = y |
| | self._imcache = None |
| | self.stale = True |
| |
|
| | def set_array(self, *args): |
| | raise NotImplementedError('Method not supported') |
| |
|
| | def set_interpolation(self, s): |
| | """ |
| | Parameters |
| | ---------- |
| | s : {'nearest', 'bilinear'} or None |
| | If None, use :rc:`image.interpolation`. |
| | """ |
| | if s is not None and s not in ('nearest', 'bilinear'): |
| | raise NotImplementedError('Only nearest neighbor and ' |
| | 'bilinear interpolations are supported') |
| | super().set_interpolation(s) |
| |
|
| | def get_extent(self): |
| | if self._A is None: |
| | raise RuntimeError('Must set data first') |
| | return self._Ax[0], self._Ax[-1], self._Ay[0], self._Ay[-1] |
| |
|
| | def set_filternorm(self, filternorm): |
| | pass |
| |
|
| | def set_filterrad(self, filterrad): |
| | pass |
| |
|
| | def set_norm(self, norm): |
| | if self._A is not None: |
| | raise RuntimeError('Cannot change colors after loading data') |
| | super().set_norm(norm) |
| |
|
| | def set_cmap(self, cmap): |
| | if self._A is not None: |
| | raise RuntimeError('Cannot change colors after loading data') |
| | super().set_cmap(cmap) |
| |
|
| | def get_cursor_data(self, event): |
| | |
| | x, y = event.xdata, event.ydata |
| | if (x < self._Ax[0] or x > self._Ax[-1] or |
| | y < self._Ay[0] or y > self._Ay[-1]): |
| | return None |
| | j = np.searchsorted(self._Ax, x) - 1 |
| | i = np.searchsorted(self._Ay, y) - 1 |
| | return self._A[i, j] |
| |
|
| |
|
| | class PcolorImage(AxesImage): |
| | """ |
| | Make a pcolor-style plot with an irregular rectangular grid. |
| | |
| | This uses a variation of the original irregular image code, |
| | and it is used by pcolorfast for the corresponding grid type. |
| | """ |
| |
|
| | def __init__(self, ax, |
| | x=None, |
| | y=None, |
| | A=None, |
| | *, |
| | cmap=None, |
| | norm=None, |
| | colorizer=None, |
| | **kwargs |
| | ): |
| | """ |
| | Parameters |
| | ---------- |
| | ax : `~matplotlib.axes.Axes` |
| | The Axes the image will belong to. |
| | x, y : 1D array-like, optional |
| | Monotonic arrays of length N+1 and M+1, respectively, specifying |
| | rectangle boundaries. If not given, will default to |
| | ``range(N + 1)`` and ``range(M + 1)``, respectively. |
| | A : array-like |
| | The data to be color-coded. The interpretation depends on the |
| | shape: |
| | |
| | - (M, N) `~numpy.ndarray` or masked array: values to be colormapped |
| | - (M, N, 3): RGB array |
| | - (M, N, 4): RGBA array |
| | |
| | cmap : str or `~matplotlib.colors.Colormap`, default: :rc:`image.cmap` |
| | The Colormap instance or registered colormap name used to map |
| | scalar data to colors. |
| | norm : str or `~matplotlib.colors.Normalize` |
| | Maps luminance to 0-1. |
| | **kwargs : `~matplotlib.artist.Artist` properties |
| | """ |
| | super().__init__(ax, norm=norm, cmap=cmap, colorizer=colorizer) |
| | self._internal_update(kwargs) |
| | if A is not None: |
| | self.set_data(x, y, A) |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | |
| | if self._A is None: |
| | raise RuntimeError('You must first set the image array') |
| | if unsampled: |
| | raise ValueError('unsampled not supported on PColorImage') |
| |
|
| | if self._imcache is None: |
| | A = self.to_rgba(self._A, bytes=True) |
| | self._imcache = np.pad(A, [(1, 1), (1, 1), (0, 0)], "constant") |
| | padded_A = self._imcache |
| | bg = mcolors.to_rgba(self.axes.patch.get_facecolor(), 0) |
| | bg = (np.array(bg) * 255).astype(np.uint8) |
| | if (padded_A[0, 0] != bg).all(): |
| | padded_A[[0, -1], :] = padded_A[:, [0, -1]] = bg |
| |
|
| | l, b, r, t = self.axes.bbox.extents |
| | width = (round(r) + 0.5) - (round(l) - 0.5) |
| | height = (round(t) + 0.5) - (round(b) - 0.5) |
| | width = round(width * magnification) |
| | height = round(height * magnification) |
| | vl = self.axes.viewLim |
| |
|
| | x_pix = np.linspace(vl.x0, vl.x1, width) |
| | y_pix = np.linspace(vl.y0, vl.y1, height) |
| | x_int = self._Ax.searchsorted(x_pix) |
| | y_int = self._Ay.searchsorted(y_pix) |
| | im = ( |
| | padded_A.view(np.uint32).ravel()[ |
| | np.add.outer(y_int * padded_A.shape[1], x_int)] |
| | .view(np.uint8).reshape((height, width, 4))) |
| | return im, l, b, IdentityTransform() |
| |
|
| | def _check_unsampled_image(self): |
| | return False |
| |
|
| | def set_data(self, x, y, A): |
| | """ |
| | Set the grid for the rectangle boundaries, and the data values. |
| | |
| | Parameters |
| | ---------- |
| | x, y : 1D array-like, optional |
| | Monotonic arrays of length N+1 and M+1, respectively, specifying |
| | rectangle boundaries. If not given, will default to |
| | ``range(N + 1)`` and ``range(M + 1)``, respectively. |
| | A : array-like |
| | The data to be color-coded. The interpretation depends on the |
| | shape: |
| | |
| | - (M, N) `~numpy.ndarray` or masked array: values to be colormapped |
| | - (M, N, 3): RGB array |
| | - (M, N, 4): RGBA array |
| | """ |
| | A = self._normalize_image_array(A) |
| | x = np.arange(0., A.shape[1] + 1) if x is None else np.array(x, float).ravel() |
| | y = np.arange(0., A.shape[0] + 1) if y is None else np.array(y, float).ravel() |
| | if A.shape[:2] != (y.size - 1, x.size - 1): |
| | raise ValueError( |
| | "Axes don't match array shape. Got %s, expected %s." % |
| | (A.shape[:2], (y.size - 1, x.size - 1))) |
| | |
| | if x[-1] < x[0]: |
| | x = x[::-1] |
| | A = A[:, ::-1] |
| | if y[-1] < y[0]: |
| | y = y[::-1] |
| | A = A[::-1] |
| | self._A = A |
| | self._Ax = x |
| | self._Ay = y |
| | self._imcache = None |
| | self.stale = True |
| |
|
| | def set_array(self, *args): |
| | raise NotImplementedError('Method not supported') |
| |
|
| | def get_cursor_data(self, event): |
| | |
| | x, y = event.xdata, event.ydata |
| | if (x < self._Ax[0] or x > self._Ax[-1] or |
| | y < self._Ay[0] or y > self._Ay[-1]): |
| | return None |
| | j = np.searchsorted(self._Ax, x) - 1 |
| | i = np.searchsorted(self._Ay, y) - 1 |
| | return self._A[i, j] |
| |
|
| |
|
| | class FigureImage(_ImageBase): |
| | """An image attached to a figure.""" |
| |
|
| | zorder = 0 |
| |
|
| | _interpolation = 'nearest' |
| |
|
| | def __init__(self, fig, |
| | *, |
| | cmap=None, |
| | norm=None, |
| | colorizer=None, |
| | offsetx=0, |
| | offsety=0, |
| | origin=None, |
| | **kwargs |
| | ): |
| | """ |
| | cmap is a colors.Colormap instance |
| | norm is a colors.Normalize instance to map luminance to 0-1 |
| | |
| | kwargs are an optional list of Artist keyword args |
| | """ |
| | super().__init__( |
| | None, |
| | norm=norm, |
| | cmap=cmap, |
| | colorizer=colorizer, |
| | origin=origin |
| | ) |
| | self.set_figure(fig) |
| | self.ox = offsetx |
| | self.oy = offsety |
| | self._internal_update(kwargs) |
| | self.magnification = 1.0 |
| |
|
| | def get_extent(self): |
| | """Return the image extent as tuple (left, right, bottom, top).""" |
| | numrows, numcols = self.get_size() |
| | return (-0.5 + self.ox, numcols-0.5 + self.ox, |
| | -0.5 + self.oy, numrows-0.5 + self.oy) |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | |
| | fig = self.get_figure(root=True) |
| | fac = renderer.dpi/fig.dpi |
| | |
| | |
| | |
| | bbox = Bbox([[self.ox/fac, self.oy/fac], |
| | [(self.ox/fac + self._A.shape[1]), |
| | (self.oy/fac + self._A.shape[0])]]) |
| | width, height = fig.get_size_inches() |
| | width *= renderer.dpi |
| | height *= renderer.dpi |
| | clip = Bbox([[0, 0], [width, height]]) |
| | return self._make_image( |
| | self._A, bbox, bbox, clip, magnification=magnification / fac, |
| | unsampled=unsampled, round_to_pixel_border=False) |
| |
|
| | def set_data(self, A): |
| | """Set the image array.""" |
| | super().set_data(A) |
| | self.stale = True |
| |
|
| |
|
| | class BboxImage(_ImageBase): |
| | """The Image class whose size is determined by the given bbox.""" |
| |
|
| | def __init__(self, bbox, |
| | *, |
| | cmap=None, |
| | norm=None, |
| | colorizer=None, |
| | interpolation=None, |
| | origin=None, |
| | filternorm=True, |
| | filterrad=4.0, |
| | resample=False, |
| | **kwargs |
| | ): |
| | """ |
| | cmap is a colors.Colormap instance |
| | norm is a colors.Normalize instance to map luminance to 0-1 |
| | |
| | kwargs are an optional list of Artist keyword args |
| | """ |
| | super().__init__( |
| | None, |
| | cmap=cmap, |
| | norm=norm, |
| | colorizer=colorizer, |
| | interpolation=interpolation, |
| | origin=origin, |
| | filternorm=filternorm, |
| | filterrad=filterrad, |
| | resample=resample, |
| | **kwargs |
| | ) |
| | self.bbox = bbox |
| |
|
| | def get_window_extent(self, renderer=None): |
| | if renderer is None: |
| | renderer = self.get_figure()._get_renderer() |
| |
|
| | if isinstance(self.bbox, BboxBase): |
| | return self.bbox |
| | elif callable(self.bbox): |
| | return self.bbox(renderer) |
| | else: |
| | raise ValueError("Unknown type of bbox") |
| |
|
| | def contains(self, mouseevent): |
| | """Test whether the mouse event occurred within the image.""" |
| | if self._different_canvas(mouseevent) or not self.get_visible(): |
| | return False, {} |
| | x, y = mouseevent.x, mouseevent.y |
| | inside = self.get_window_extent().contains(x, y) |
| | return inside, {} |
| |
|
| | def make_image(self, renderer, magnification=1.0, unsampled=False): |
| | |
| | width, height = renderer.get_canvas_width_height() |
| | bbox_in = self.get_window_extent(renderer).frozen() |
| | bbox_in._points /= [width, height] |
| | bbox_out = self.get_window_extent(renderer) |
| | clip = Bbox([[0, 0], [width, height]]) |
| | self._transform = BboxTransformTo(clip) |
| | return self._make_image( |
| | self._A, |
| | bbox_in, bbox_out, clip, magnification, unsampled=unsampled) |
| |
|
| |
|
| | def imread(fname, format=None): |
| | """ |
| | Read an image from a file into an array. |
| | |
| | .. note:: |
| | |
| | This function exists for historical reasons. It is recommended to |
| | use `PIL.Image.open` instead for loading images. |
| | |
| | Parameters |
| | ---------- |
| | fname : str or file-like |
| | The image file to read: a filename, a URL or a file-like object opened |
| | in read-binary mode. |
| | |
| | Passing a URL is deprecated. Please open the URL |
| | for reading and pass the result to Pillow, e.g. with |
| | ``np.array(PIL.Image.open(urllib.request.urlopen(url)))``. |
| | format : str, optional |
| | The image file format assumed for reading the data. The image is |
| | loaded as a PNG file if *format* is set to "png", if *fname* is a path |
| | or opened file with a ".png" extension, or if it is a URL. In all |
| | other cases, *format* is ignored and the format is auto-detected by |
| | `PIL.Image.open`. |
| | |
| | Returns |
| | ------- |
| | `numpy.array` |
| | The image data. The returned array has shape |
| | |
| | - (M, N) for grayscale images. |
| | - (M, N, 3) for RGB images. |
| | - (M, N, 4) for RGBA images. |
| | |
| | PNG images are returned as float arrays (0-1). All other formats are |
| | returned as int arrays, with a bit depth determined by the file's |
| | contents. |
| | """ |
| | |
| | from urllib import parse |
| |
|
| | if format is None: |
| | if isinstance(fname, str): |
| | parsed = parse.urlparse(fname) |
| | |
| | |
| | if len(parsed.scheme) > 1: |
| | ext = 'png' |
| | else: |
| | ext = Path(fname).suffix.lower()[1:] |
| | elif hasattr(fname, 'geturl'): |
| | |
| | |
| | |
| | |
| | |
| | ext = 'png' |
| | elif hasattr(fname, 'name'): |
| | ext = Path(fname.name).suffix.lower()[1:] |
| | else: |
| | ext = 'png' |
| | else: |
| | ext = format |
| | img_open = ( |
| | PIL.PngImagePlugin.PngImageFile if ext == 'png' else PIL.Image.open) |
| | if isinstance(fname, str) and len(parse.urlparse(fname).scheme) > 1: |
| | |
| | raise ValueError( |
| | "Please open the URL for reading and pass the " |
| | "result to Pillow, e.g. with " |
| | "``np.array(PIL.Image.open(urllib.request.urlopen(url)))``." |
| | ) |
| | with img_open(fname) as image: |
| | return (_pil_png_to_float_array(image) |
| | if isinstance(image, PIL.PngImagePlugin.PngImageFile) else |
| | pil_to_array(image)) |
| |
|
| |
|
| | def imsave(fname, arr, vmin=None, vmax=None, cmap=None, format=None, |
| | origin=None, dpi=100, *, metadata=None, pil_kwargs=None): |
| | """ |
| | Colormap and save an array as an image file. |
| | |
| | RGB(A) images are passed through. Single channel images will be |
| | colormapped according to *cmap* and *norm*. |
| | |
| | .. note:: |
| | |
| | If you want to save a single channel image as gray scale please use an |
| | image I/O library (such as pillow, tifffile, or imageio) directly. |
| | |
| | Parameters |
| | ---------- |
| | fname : str or path-like or file-like |
| | A path or a file-like object to store the image in. |
| | If *format* is not set, then the output format is inferred from the |
| | extension of *fname*, if any, and from :rc:`savefig.format` otherwise. |
| | If *format* is set, it determines the output format. |
| | arr : array-like |
| | The image data. The shape can be one of |
| | MxN (luminance), MxNx3 (RGB) or MxNx4 (RGBA). |
| | vmin, vmax : float, optional |
| | *vmin* and *vmax* set the color scaling for the image by fixing the |
| | values that map to the colormap color limits. If either *vmin* |
| | or *vmax* is None, that limit is determined from the *arr* |
| | min/max value. |
| | cmap : str or `~matplotlib.colors.Colormap`, default: :rc:`image.cmap` |
| | A Colormap instance or registered colormap name. The colormap |
| | maps scalar data to colors. It is ignored for RGB(A) data. |
| | format : str, optional |
| | The file format, e.g. 'png', 'pdf', 'svg', ... The behavior when this |
| | is unset is documented under *fname*. |
| | origin : {'upper', 'lower'}, default: :rc:`image.origin` |
| | Indicates whether the ``(0, 0)`` index of the array is in the upper |
| | left or lower left corner of the Axes. |
| | dpi : float |
| | The DPI to store in the metadata of the file. This does not affect the |
| | resolution of the output image. Depending on file format, this may be |
| | rounded to the nearest integer. |
| | metadata : dict, optional |
| | Metadata in the image file. The supported keys depend on the output |
| | format, see the documentation of the respective backends for more |
| | information. |
| | Currently only supported for "png", "pdf", "ps", "eps", and "svg". |
| | pil_kwargs : dict, optional |
| | Keyword arguments passed to `PIL.Image.Image.save`. If the 'pnginfo' |
| | key is present, it completely overrides *metadata*, including the |
| | default 'Software' key. |
| | """ |
| | from matplotlib.figure import Figure |
| | if isinstance(fname, os.PathLike): |
| | fname = os.fspath(fname) |
| | if format is None: |
| | format = (Path(fname).suffix[1:] if isinstance(fname, str) |
| | else mpl.rcParams["savefig.format"]).lower() |
| | if format in ["pdf", "ps", "eps", "svg"]: |
| | |
| | if pil_kwargs is not None: |
| | raise ValueError( |
| | f"Cannot use 'pil_kwargs' when saving to {format}") |
| | fig = Figure(dpi=dpi, frameon=False) |
| | fig.figimage(arr, cmap=cmap, vmin=vmin, vmax=vmax, origin=origin, |
| | resize=True) |
| | fig.savefig(fname, dpi=dpi, format=format, transparent=True, |
| | metadata=metadata) |
| | else: |
| | |
| | |
| | if origin is None: |
| | origin = mpl.rcParams["image.origin"] |
| | else: |
| | _api.check_in_list(('upper', 'lower'), origin=origin) |
| | if origin == "lower": |
| | arr = arr[::-1] |
| | if (isinstance(arr, memoryview) and arr.format == "B" |
| | and arr.ndim == 3 and arr.shape[-1] == 4): |
| | |
| | |
| | |
| | |
| | rgba = arr |
| | else: |
| | sm = mcolorizer.Colorizer(cmap=cmap) |
| | sm.set_clim(vmin, vmax) |
| | rgba = sm.to_rgba(arr, bytes=True) |
| | if pil_kwargs is None: |
| | pil_kwargs = {} |
| | else: |
| | |
| | pil_kwargs = pil_kwargs.copy() |
| | pil_shape = (rgba.shape[1], rgba.shape[0]) |
| | rgba = np.require(rgba, requirements='C') |
| | image = PIL.Image.frombuffer( |
| | "RGBA", pil_shape, rgba, "raw", "RGBA", 0, 1) |
| | if format == "png": |
| | |
| | |
| | if "pnginfo" in pil_kwargs: |
| | if metadata: |
| | _api.warn_external("'metadata' is overridden by the " |
| | "'pnginfo' entry in 'pil_kwargs'.") |
| | else: |
| | metadata = { |
| | "Software": (f"Matplotlib version{mpl.__version__}, " |
| | f"https://matplotlib.org/"), |
| | **(metadata if metadata is not None else {}), |
| | } |
| | pil_kwargs["pnginfo"] = pnginfo = PIL.PngImagePlugin.PngInfo() |
| | for k, v in metadata.items(): |
| | if v is not None: |
| | pnginfo.add_text(k, v) |
| | elif metadata is not None: |
| | raise ValueError(f"metadata not supported for format {format!r}") |
| | if format in ["jpg", "jpeg"]: |
| | format = "jpeg" |
| | facecolor = mpl.rcParams["savefig.facecolor"] |
| | if cbook._str_equal(facecolor, "auto"): |
| | facecolor = mpl.rcParams["figure.facecolor"] |
| | color = tuple(int(x * 255) for x in mcolors.to_rgb(facecolor)) |
| | background = PIL.Image.new("RGB", pil_shape, color) |
| | background.paste(image, image) |
| | image = background |
| | pil_kwargs.setdefault("format", format) |
| | pil_kwargs.setdefault("dpi", (dpi, dpi)) |
| | image.save(fname, **pil_kwargs) |
| |
|
| |
|
| | def pil_to_array(pilImage): |
| | """ |
| | Load a `PIL image`_ and return it as a numpy int array. |
| | |
| | .. _PIL image: https://pillow.readthedocs.io/en/latest/reference/Image.html |
| | |
| | Returns |
| | ------- |
| | numpy.array |
| | |
| | The array shape depends on the image type: |
| | |
| | - (M, N) for grayscale images. |
| | - (M, N, 3) for RGB images. |
| | - (M, N, 4) for RGBA images. |
| | """ |
| | if pilImage.mode in ['RGBA', 'RGBX', 'RGB', 'L']: |
| | |
| | return np.asarray(pilImage) |
| | elif pilImage.mode.startswith('I;16'): |
| | |
| | raw = pilImage.tobytes('raw', pilImage.mode) |
| | if pilImage.mode.endswith('B'): |
| | x = np.frombuffer(raw, '>u2') |
| | else: |
| | x = np.frombuffer(raw, '<u2') |
| | return x.reshape(pilImage.size[::-1]).astype('=u2') |
| | else: |
| | try: |
| | pilImage = pilImage.convert('RGBA') |
| | except ValueError as err: |
| | raise RuntimeError('Unknown image mode') from err |
| | return np.asarray(pilImage) |
| |
|
| |
|
| | def _pil_png_to_float_array(pil_png): |
| | """Convert a PIL `PNGImageFile` to a 0-1 float array.""" |
| | |
| | |
| | |
| | |
| | |
| | mode = pil_png.mode |
| | rawmode = pil_png.png.im_rawmode |
| | if rawmode == "1": |
| | return np.asarray(pil_png, np.float32) |
| | if rawmode == "L;2": |
| | return np.divide(pil_png, 2**2 - 1, dtype=np.float32) |
| | if rawmode == "L;4": |
| | return np.divide(pil_png, 2**4 - 1, dtype=np.float32) |
| | if rawmode == "L": |
| | return np.divide(pil_png, 2**8 - 1, dtype=np.float32) |
| | if rawmode == "I;16B": |
| | return np.divide(pil_png, 2**16 - 1, dtype=np.float32) |
| | if mode == "RGB": |
| | return np.divide(pil_png, 2**8 - 1, dtype=np.float32) |
| | if mode == "P": |
| | return np.divide(pil_png.convert("RGBA"), 2**8 - 1, dtype=np.float32) |
| | if mode == "LA": |
| | return np.divide(pil_png.convert("RGBA"), 2**8 - 1, dtype=np.float32) |
| | if mode == "RGBA": |
| | return np.divide(pil_png, 2**8 - 1, dtype=np.float32) |
| | raise ValueError(f"Unknown PIL rawmode: {rawmode}") |
| |
|
| |
|
| | def thumbnail(infile, thumbfile, scale=0.1, interpolation='bilinear', |
| | preview=False): |
| | """ |
| | Make a thumbnail of image in *infile* with output filename *thumbfile*. |
| | |
| | See :doc:`/gallery/misc/image_thumbnail_sgskip`. |
| | |
| | Parameters |
| | ---------- |
| | infile : str or file-like |
| | The image file. Matplotlib relies on Pillow_ for image reading, and |
| | thus supports a wide range of file formats, including PNG, JPG, TIFF |
| | and others. |
| | |
| | .. _Pillow: https://python-pillow.github.io |
| | |
| | thumbfile : str or file-like |
| | The thumbnail filename. |
| | |
| | scale : float, default: 0.1 |
| | The scale factor for the thumbnail. |
| | |
| | interpolation : str, default: 'bilinear' |
| | The interpolation scheme used in the resampling. See the |
| | *interpolation* parameter of `~.Axes.imshow` for possible values. |
| | |
| | preview : bool, default: False |
| | If True, the default backend (presumably a user interface |
| | backend) will be used which will cause a figure to be raised if |
| | `~matplotlib.pyplot.show` is called. If it is False, the figure is |
| | created using `.FigureCanvasBase` and the drawing backend is selected |
| | as `.Figure.savefig` would normally do. |
| | |
| | Returns |
| | ------- |
| | `.Figure` |
| | The figure instance containing the thumbnail. |
| | """ |
| |
|
| | im = imread(infile) |
| | rows, cols, depth = im.shape |
| |
|
| | |
| | dpi = 100 |
| |
|
| | height = rows / dpi * scale |
| | width = cols / dpi * scale |
| |
|
| | if preview: |
| | |
| | import matplotlib.pyplot as plt |
| | fig = plt.figure(figsize=(width, height), dpi=dpi) |
| | else: |
| | from matplotlib.figure import Figure |
| | fig = Figure(figsize=(width, height), dpi=dpi) |
| | FigureCanvasBase(fig) |
| |
|
| | ax = fig.add_axes([0, 0, 1, 1], aspect='auto', |
| | frameon=False, xticks=[], yticks=[]) |
| | ax.imshow(im, aspect='auto', resample=True, interpolation=interpolation) |
| | fig.savefig(thumbfile, dpi=dpi) |
| | return fig |
| |
|