| | from __future__ import annotations |
| |
|
| | from contextlib import contextmanager |
| | from typing import ( |
| | TYPE_CHECKING, |
| | Any, |
| | ) |
| |
|
| | from pandas.plotting._core import _get_plot_backend |
| |
|
| | if TYPE_CHECKING: |
| | from collections.abc import ( |
| | Generator, |
| | Mapping, |
| | ) |
| |
|
| | from matplotlib.axes import Axes |
| | from matplotlib.colors import Colormap |
| | from matplotlib.figure import Figure |
| | from matplotlib.table import Table |
| | import numpy as np |
| |
|
| | from pandas import ( |
| | DataFrame, |
| | Series, |
| | ) |
| |
|
| |
|
| | def table(ax: Axes, data: DataFrame | Series, **kwargs) -> Table: |
| | """ |
| | Helper function to convert DataFrame and Series to matplotlib.table. |
| | |
| | Parameters |
| | ---------- |
| | ax : Matplotlib axes object |
| | data : DataFrame or Series |
| | Data for table contents. |
| | **kwargs |
| | Keyword arguments to be passed to matplotlib.table.table. |
| | If `rowLabels` or `colLabels` is not specified, data index or column |
| | name will be used. |
| | |
| | Returns |
| | ------- |
| | matplotlib table object |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> import matplotlib.pyplot as plt |
| | >>> df = pd.DataFrame({'A': [1, 2], 'B': [3, 4]}) |
| | >>> fix, ax = plt.subplots() |
| | >>> ax.axis('off') |
| | (0.0, 1.0, 0.0, 1.0) |
| | >>> table = pd.plotting.table(ax, df, loc='center', |
| | ... cellLoc='center', colWidths=list([.2, .2])) |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.table( |
| | ax=ax, data=data, rowLabels=None, colLabels=None, **kwargs |
| | ) |
| |
|
| |
|
| | def register() -> None: |
| | """ |
| | Register pandas formatters and converters with matplotlib. |
| | |
| | This function modifies the global ``matplotlib.units.registry`` |
| | dictionary. pandas adds custom converters for |
| | |
| | * pd.Timestamp |
| | * pd.Period |
| | * np.datetime64 |
| | * datetime.datetime |
| | * datetime.date |
| | * datetime.time |
| | |
| | See Also |
| | -------- |
| | deregister_matplotlib_converters : Remove pandas formatters and converters. |
| | |
| | Examples |
| | -------- |
| | .. plot:: |
| | :context: close-figs |
| | |
| | The following line is done automatically by pandas so |
| | the plot can be rendered: |
| | |
| | >>> pd.plotting.register_matplotlib_converters() |
| | |
| | >>> df = pd.DataFrame({'ts': pd.period_range('2020', periods=2, freq='M'), |
| | ... 'y': [1, 2] |
| | ... }) |
| | >>> plot = df.plot.line(x='ts', y='y') |
| | |
| | Unsetting the register manually an error will be raised: |
| | |
| | >>> pd.set_option("plotting.matplotlib.register_converters", |
| | ... False) # doctest: +SKIP |
| | >>> df.plot.line(x='ts', y='y') # doctest: +SKIP |
| | Traceback (most recent call last): |
| | TypeError: float() argument must be a string or a real number, not 'Period' |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | plot_backend.register() |
| |
|
| |
|
| | def deregister() -> None: |
| | """ |
| | Remove pandas formatters and converters. |
| | |
| | Removes the custom converters added by :func:`register`. This |
| | attempts to set the state of the registry back to the state before |
| | pandas registered its own units. Converters for pandas' own types like |
| | Timestamp and Period are removed completely. Converters for types |
| | pandas overwrites, like ``datetime.datetime``, are restored to their |
| | original value. |
| | |
| | See Also |
| | -------- |
| | register_matplotlib_converters : Register pandas formatters and converters |
| | with matplotlib. |
| | |
| | Examples |
| | -------- |
| | .. plot:: |
| | :context: close-figs |
| | |
| | The following line is done automatically by pandas so |
| | the plot can be rendered: |
| | |
| | >>> pd.plotting.register_matplotlib_converters() |
| | |
| | >>> df = pd.DataFrame({'ts': pd.period_range('2020', periods=2, freq='M'), |
| | ... 'y': [1, 2] |
| | ... }) |
| | >>> plot = df.plot.line(x='ts', y='y') |
| | |
| | Unsetting the register manually an error will be raised: |
| | |
| | >>> pd.set_option("plotting.matplotlib.register_converters", |
| | ... False) # doctest: +SKIP |
| | >>> df.plot.line(x='ts', y='y') # doctest: +SKIP |
| | Traceback (most recent call last): |
| | TypeError: float() argument must be a string or a real number, not 'Period' |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | plot_backend.deregister() |
| |
|
| |
|
| | def scatter_matrix( |
| | frame: DataFrame, |
| | alpha: float = 0.5, |
| | figsize: tuple[float, float] | None = None, |
| | ax: Axes | None = None, |
| | grid: bool = False, |
| | diagonal: str = "hist", |
| | marker: str = ".", |
| | density_kwds: Mapping[str, Any] | None = None, |
| | hist_kwds: Mapping[str, Any] | None = None, |
| | range_padding: float = 0.05, |
| | **kwargs, |
| | ) -> np.ndarray: |
| | """ |
| | Draw a matrix of scatter plots. |
| | |
| | Parameters |
| | ---------- |
| | frame : DataFrame |
| | alpha : float, optional |
| | Amount of transparency applied. |
| | figsize : (float,float), optional |
| | A tuple (width, height) in inches. |
| | ax : Matplotlib axis object, optional |
| | grid : bool, optional |
| | Setting this to True will show the grid. |
| | diagonal : {'hist', 'kde'} |
| | Pick between 'kde' and 'hist' for either Kernel Density Estimation or |
| | Histogram plot in the diagonal. |
| | marker : str, optional |
| | Matplotlib marker type, default '.'. |
| | density_kwds : keywords |
| | Keyword arguments to be passed to kernel density estimate plot. |
| | hist_kwds : keywords |
| | Keyword arguments to be passed to hist function. |
| | range_padding : float, default 0.05 |
| | Relative extension of axis range in x and y with respect to |
| | (x_max - x_min) or (y_max - y_min). |
| | **kwargs |
| | Keyword arguments to be passed to scatter function. |
| | |
| | Returns |
| | ------- |
| | numpy.ndarray |
| | A matrix of scatter plots. |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> df = pd.DataFrame(np.random.randn(1000, 4), columns=['A','B','C','D']) |
| | >>> pd.plotting.scatter_matrix(df, alpha=0.2) |
| | array([[<Axes: xlabel='A', ylabel='A'>, <Axes: xlabel='B', ylabel='A'>, |
| | <Axes: xlabel='C', ylabel='A'>, <Axes: xlabel='D', ylabel='A'>], |
| | [<Axes: xlabel='A', ylabel='B'>, <Axes: xlabel='B', ylabel='B'>, |
| | <Axes: xlabel='C', ylabel='B'>, <Axes: xlabel='D', ylabel='B'>], |
| | [<Axes: xlabel='A', ylabel='C'>, <Axes: xlabel='B', ylabel='C'>, |
| | <Axes: xlabel='C', ylabel='C'>, <Axes: xlabel='D', ylabel='C'>], |
| | [<Axes: xlabel='A', ylabel='D'>, <Axes: xlabel='B', ylabel='D'>, |
| | <Axes: xlabel='C', ylabel='D'>, <Axes: xlabel='D', ylabel='D'>]], |
| | dtype=object) |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.scatter_matrix( |
| | frame=frame, |
| | alpha=alpha, |
| | figsize=figsize, |
| | ax=ax, |
| | grid=grid, |
| | diagonal=diagonal, |
| | marker=marker, |
| | density_kwds=density_kwds, |
| | hist_kwds=hist_kwds, |
| | range_padding=range_padding, |
| | **kwargs, |
| | ) |
| |
|
| |
|
| | def radviz( |
| | frame: DataFrame, |
| | class_column: str, |
| | ax: Axes | None = None, |
| | color: list[str] | tuple[str, ...] | None = None, |
| | colormap: Colormap | str | None = None, |
| | **kwds, |
| | ) -> Axes: |
| | """ |
| | Plot a multidimensional dataset in 2D. |
| | |
| | Each Series in the DataFrame is represented as a evenly distributed |
| | slice on a circle. Each data point is rendered in the circle according to |
| | the value on each Series. Highly correlated `Series` in the `DataFrame` |
| | are placed closer on the unit circle. |
| | |
| | RadViz allow to project a N-dimensional data set into a 2D space where the |
| | influence of each dimension can be interpreted as a balance between the |
| | influence of all dimensions. |
| | |
| | More info available at the `original article |
| | <https://doi.org/10.1145/331770.331775>`_ |
| | describing RadViz. |
| | |
| | Parameters |
| | ---------- |
| | frame : `DataFrame` |
| | Object holding the data. |
| | class_column : str |
| | Column name containing the name of the data point category. |
| | ax : :class:`matplotlib.axes.Axes`, optional |
| | A plot instance to which to add the information. |
| | color : list[str] or tuple[str], optional |
| | Assign a color to each category. Example: ['blue', 'green']. |
| | colormap : str or :class:`matplotlib.colors.Colormap`, default None |
| | Colormap to select colors from. If string, load colormap with that |
| | name from matplotlib. |
| | **kwds |
| | Options to pass to matplotlib scatter plotting method. |
| | |
| | Returns |
| | ------- |
| | :class:`matplotlib.axes.Axes` |
| | |
| | See Also |
| | -------- |
| | pandas.plotting.andrews_curves : Plot clustering visualization. |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> df = pd.DataFrame( |
| | ... { |
| | ... 'SepalLength': [6.5, 7.7, 5.1, 5.8, 7.6, 5.0, 5.4, 4.6, 6.7, 4.6], |
| | ... 'SepalWidth': [3.0, 3.8, 3.8, 2.7, 3.0, 2.3, 3.0, 3.2, 3.3, 3.6], |
| | ... 'PetalLength': [5.5, 6.7, 1.9, 5.1, 6.6, 3.3, 4.5, 1.4, 5.7, 1.0], |
| | ... 'PetalWidth': [1.8, 2.2, 0.4, 1.9, 2.1, 1.0, 1.5, 0.2, 2.1, 0.2], |
| | ... 'Category': [ |
| | ... 'virginica', |
| | ... 'virginica', |
| | ... 'setosa', |
| | ... 'virginica', |
| | ... 'virginica', |
| | ... 'versicolor', |
| | ... 'versicolor', |
| | ... 'setosa', |
| | ... 'virginica', |
| | ... 'setosa' |
| | ... ] |
| | ... } |
| | ... ) |
| | >>> pd.plotting.radviz(df, 'Category') # doctest: +SKIP |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.radviz( |
| | frame=frame, |
| | class_column=class_column, |
| | ax=ax, |
| | color=color, |
| | colormap=colormap, |
| | **kwds, |
| | ) |
| |
|
| |
|
| | def andrews_curves( |
| | frame: DataFrame, |
| | class_column: str, |
| | ax: Axes | None = None, |
| | samples: int = 200, |
| | color: list[str] | tuple[str, ...] | None = None, |
| | colormap: Colormap | str | None = None, |
| | **kwargs, |
| | ) -> Axes: |
| | """ |
| | Generate a matplotlib plot for visualizing clusters of multivariate data. |
| | |
| | Andrews curves have the functional form: |
| | |
| | .. math:: |
| | f(t) = \\frac{x_1}{\\sqrt{2}} + x_2 \\sin(t) + x_3 \\cos(t) + |
| | x_4 \\sin(2t) + x_5 \\cos(2t) + \\cdots |
| | |
| | Where :math:`x` coefficients correspond to the values of each dimension |
| | and :math:`t` is linearly spaced between :math:`-\\pi` and :math:`+\\pi`. |
| | Each row of frame then corresponds to a single curve. |
| | |
| | Parameters |
| | ---------- |
| | frame : DataFrame |
| | Data to be plotted, preferably normalized to (0.0, 1.0). |
| | class_column : label |
| | Name of the column containing class names. |
| | ax : axes object, default None |
| | Axes to use. |
| | samples : int |
| | Number of points to plot in each curve. |
| | color : str, list[str] or tuple[str], optional |
| | Colors to use for the different classes. Colors can be strings |
| | or 3-element floating point RGB values. |
| | colormap : str or matplotlib colormap object, default None |
| | Colormap to select colors from. If a string, load colormap with that |
| | name from matplotlib. |
| | **kwargs |
| | Options to pass to matplotlib plotting method. |
| | |
| | Returns |
| | ------- |
| | :class:`matplotlib.axes.Axes` |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> df = pd.read_csv( |
| | ... 'https://raw.githubusercontent.com/pandas-dev/' |
| | ... 'pandas/main/pandas/tests/io/data/csv/iris.csv' |
| | ... ) |
| | >>> pd.plotting.andrews_curves(df, 'Name') # doctest: +SKIP |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.andrews_curves( |
| | frame=frame, |
| | class_column=class_column, |
| | ax=ax, |
| | samples=samples, |
| | color=color, |
| | colormap=colormap, |
| | **kwargs, |
| | ) |
| |
|
| |
|
| | def bootstrap_plot( |
| | series: Series, |
| | fig: Figure | None = None, |
| | size: int = 50, |
| | samples: int = 500, |
| | **kwds, |
| | ) -> Figure: |
| | """ |
| | Bootstrap plot on mean, median and mid-range statistics. |
| | |
| | The bootstrap plot is used to estimate the uncertainty of a statistic |
| | by relying on random sampling with replacement [1]_. This function will |
| | generate bootstrapping plots for mean, median and mid-range statistics |
| | for the given number of samples of the given size. |
| | |
| | .. [1] "Bootstrapping (statistics)" in \ |
| | https://en.wikipedia.org/wiki/Bootstrapping_%28statistics%29 |
| | |
| | Parameters |
| | ---------- |
| | series : pandas.Series |
| | Series from where to get the samplings for the bootstrapping. |
| | fig : matplotlib.figure.Figure, default None |
| | If given, it will use the `fig` reference for plotting instead of |
| | creating a new one with default parameters. |
| | size : int, default 50 |
| | Number of data points to consider during each sampling. It must be |
| | less than or equal to the length of the `series`. |
| | samples : int, default 500 |
| | Number of times the bootstrap procedure is performed. |
| | **kwds |
| | Options to pass to matplotlib plotting method. |
| | |
| | Returns |
| | ------- |
| | matplotlib.figure.Figure |
| | Matplotlib figure. |
| | |
| | See Also |
| | -------- |
| | pandas.DataFrame.plot : Basic plotting for DataFrame objects. |
| | pandas.Series.plot : Basic plotting for Series objects. |
| | |
| | Examples |
| | -------- |
| | This example draws a basic bootstrap plot for a Series. |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> s = pd.Series(np.random.uniform(size=100)) |
| | >>> pd.plotting.bootstrap_plot(s) # doctest: +SKIP |
| | <Figure size 640x480 with 6 Axes> |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.bootstrap_plot( |
| | series=series, fig=fig, size=size, samples=samples, **kwds |
| | ) |
| |
|
| |
|
| | def parallel_coordinates( |
| | frame: DataFrame, |
| | class_column: str, |
| | cols: list[str] | None = None, |
| | ax: Axes | None = None, |
| | color: list[str] | tuple[str, ...] | None = None, |
| | use_columns: bool = False, |
| | xticks: list | tuple | None = None, |
| | colormap: Colormap | str | None = None, |
| | axvlines: bool = True, |
| | axvlines_kwds: Mapping[str, Any] | None = None, |
| | sort_labels: bool = False, |
| | **kwargs, |
| | ) -> Axes: |
| | """ |
| | Parallel coordinates plotting. |
| | |
| | Parameters |
| | ---------- |
| | frame : DataFrame |
| | class_column : str |
| | Column name containing class names. |
| | cols : list, optional |
| | A list of column names to use. |
| | ax : matplotlib.axis, optional |
| | Matplotlib axis object. |
| | color : list or tuple, optional |
| | Colors to use for the different classes. |
| | use_columns : bool, optional |
| | If true, columns will be used as xticks. |
| | xticks : list or tuple, optional |
| | A list of values to use for xticks. |
| | colormap : str or matplotlib colormap, default None |
| | Colormap to use for line colors. |
| | axvlines : bool, optional |
| | If true, vertical lines will be added at each xtick. |
| | axvlines_kwds : keywords, optional |
| | Options to be passed to axvline method for vertical lines. |
| | sort_labels : bool, default False |
| | Sort class_column labels, useful when assigning colors. |
| | **kwargs |
| | Options to pass to matplotlib plotting method. |
| | |
| | Returns |
| | ------- |
| | matplotlib.axes.Axes |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> df = pd.read_csv( |
| | ... 'https://raw.githubusercontent.com/pandas-dev/' |
| | ... 'pandas/main/pandas/tests/io/data/csv/iris.csv' |
| | ... ) |
| | >>> pd.plotting.parallel_coordinates( |
| | ... df, 'Name', color=('#556270', '#4ECDC4', '#C7F464') |
| | ... ) # doctest: +SKIP |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.parallel_coordinates( |
| | frame=frame, |
| | class_column=class_column, |
| | cols=cols, |
| | ax=ax, |
| | color=color, |
| | use_columns=use_columns, |
| | xticks=xticks, |
| | colormap=colormap, |
| | axvlines=axvlines, |
| | axvlines_kwds=axvlines_kwds, |
| | sort_labels=sort_labels, |
| | **kwargs, |
| | ) |
| |
|
| |
|
| | def lag_plot(series: Series, lag: int = 1, ax: Axes | None = None, **kwds) -> Axes: |
| | """ |
| | Lag plot for time series. |
| | |
| | Parameters |
| | ---------- |
| | series : Series |
| | The time series to visualize. |
| | lag : int, default 1 |
| | Lag length of the scatter plot. |
| | ax : Matplotlib axis object, optional |
| | The matplotlib axis object to use. |
| | **kwds |
| | Matplotlib scatter method keyword arguments. |
| | |
| | Returns |
| | ------- |
| | matplotlib.axes.Axes |
| | |
| | Examples |
| | -------- |
| | Lag plots are most commonly used to look for patterns in time series data. |
| | |
| | Given the following time series |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> np.random.seed(5) |
| | >>> x = np.cumsum(np.random.normal(loc=1, scale=5, size=50)) |
| | >>> s = pd.Series(x) |
| | >>> s.plot() # doctest: +SKIP |
| | |
| | A lag plot with ``lag=1`` returns |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> pd.plotting.lag_plot(s, lag=1) |
| | <Axes: xlabel='y(t)', ylabel='y(t + 1)'> |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.lag_plot(series=series, lag=lag, ax=ax, **kwds) |
| |
|
| |
|
| | def autocorrelation_plot(series: Series, ax: Axes | None = None, **kwargs) -> Axes: |
| | """ |
| | Autocorrelation plot for time series. |
| | |
| | Parameters |
| | ---------- |
| | series : Series |
| | The time series to visualize. |
| | ax : Matplotlib axis object, optional |
| | The matplotlib axis object to use. |
| | **kwargs |
| | Options to pass to matplotlib plotting method. |
| | |
| | Returns |
| | ------- |
| | matplotlib.axes.Axes |
| | |
| | Examples |
| | -------- |
| | The horizontal lines in the plot correspond to 95% and 99% confidence bands. |
| | |
| | The dashed line is 99% confidence band. |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> spacing = np.linspace(-9 * np.pi, 9 * np.pi, num=1000) |
| | >>> s = pd.Series(0.7 * np.random.rand(1000) + 0.3 * np.sin(spacing)) |
| | >>> pd.plotting.autocorrelation_plot(s) # doctest: +SKIP |
| | """ |
| | plot_backend = _get_plot_backend("matplotlib") |
| | return plot_backend.autocorrelation_plot(series=series, ax=ax, **kwargs) |
| |
|
| |
|
| | class _Options(dict): |
| | """ |
| | Stores pandas plotting options. |
| | |
| | Allows for parameter aliasing so you can just use parameter names that are |
| | the same as the plot function parameters, but is stored in a canonical |
| | format that makes it easy to breakdown into groups later. |
| | |
| | Examples |
| | -------- |
| | |
| | .. plot:: |
| | :context: close-figs |
| | |
| | >>> np.random.seed(42) |
| | >>> df = pd.DataFrame({'A': np.random.randn(10), |
| | ... 'B': np.random.randn(10)}, |
| | ... index=pd.date_range("1/1/2000", |
| | ... freq='4MS', periods=10)) |
| | >>> with pd.plotting.plot_params.use("x_compat", True): |
| | ... _ = df["A"].plot(color="r") |
| | ... _ = df["B"].plot(color="g") |
| | """ |
| |
|
| | |
| | _ALIASES = {"x_compat": "xaxis.compat"} |
| | _DEFAULT_KEYS = ["xaxis.compat"] |
| |
|
| | def __init__(self, deprecated: bool = False) -> None: |
| | self._deprecated = deprecated |
| | super().__setitem__("xaxis.compat", False) |
| |
|
| | def __getitem__(self, key): |
| | key = self._get_canonical_key(key) |
| | if key not in self: |
| | raise ValueError(f"{key} is not a valid pandas plotting option") |
| | return super().__getitem__(key) |
| |
|
| | def __setitem__(self, key, value) -> None: |
| | key = self._get_canonical_key(key) |
| | super().__setitem__(key, value) |
| |
|
| | def __delitem__(self, key) -> None: |
| | key = self._get_canonical_key(key) |
| | if key in self._DEFAULT_KEYS: |
| | raise ValueError(f"Cannot remove default parameter {key}") |
| | super().__delitem__(key) |
| |
|
| | def __contains__(self, key) -> bool: |
| | key = self._get_canonical_key(key) |
| | return super().__contains__(key) |
| |
|
| | def reset(self) -> None: |
| | """ |
| | Reset the option store to its initial state |
| | |
| | Returns |
| | ------- |
| | None |
| | """ |
| | |
| | self.__init__() |
| |
|
| | def _get_canonical_key(self, key): |
| | return self._ALIASES.get(key, key) |
| |
|
| | @contextmanager |
| | def use(self, key, value) -> Generator[_Options, None, None]: |
| | """ |
| | Temporarily set a parameter value using the with statement. |
| | Aliasing allowed. |
| | """ |
| | old_value = self[key] |
| | try: |
| | self[key] = value |
| | yield self |
| | finally: |
| | self[key] = old_value |
| |
|
| |
|
| | plot_params = _Options() |
| |
|